Index of /fleming/DKlab/mr/parclip/paralyzer/PARalyzer_v1_1c
Name
Last modified
Size
Description
Parent Directory
-
0hrep1-uor.log
2018-04-24 16:07
2.4K
0hrep1.log-mRNA
2018-03-27 18:52
12K
0hrep1.log2
2018-03-22 16:03
12K
0hrep1.log2s
2018-04-02 17:30
7.2K
0hrep2.log2
2018-03-22 16:21
7.1K
0hrep3.log2
2018-03-22 17:09
17K
2hrep1.log2
2018-03-26 16:49
8.6K
2hrep1.log2s
2018-04-02 18:22
7.2K
2hrep2.log2
2018-03-22 15:47
8.7K
2hrep2.mRNA-log2
2018-03-26 17:31
8.7K
2hrep3.log2
2018-03-22 15:19
10K
2hrep3.mRNA-log2
2018-03-26 18:57
9.6K
6hrep1.log2
2018-03-22 16:47
17K
6hrep1.log2s
2018-04-02 18:49
7.3K
6hrep2.log2
2018-03-22 17:22
13K
6hrep3.log2
2018-03-22 17:41
7.7K
AlignedPARCLIPread.java
2018-03-22 14:07
3.0K
Chromosome.java
2018-03-22 14:07
1.2K
FilterBlock.java
2018-03-22 14:07
1.4K
Genome.java
2018-03-22 14:07
2.8K
GenomicBlock.java
2018-03-22 14:07
385
IFN.log2
2018-03-22 14:56
7.2K
IGG.log2
2018-03-22 14:54
7.1K
IL4.log-mRNA
2018-03-27 12:57
14K
IL4.log2
2018-03-22 15:32
14K
IL4.log2s
2018-04-02 19:15
7.2K
KDECluster.java
2018-03-22 14:07
6.9K
MIRNA.java
2018-03-22 14:07
327
MIRNAseedMatch.java
2018-03-22 14:07
805
MyTwoBitParser.java
2018-03-22 14:07
5.7K
PARCLIPbowtieParser.java
2018-04-24 16:13
4.8K
PARCLIPbowtieParser.java-v1
2018-04-24 16:12
4.8K
PARCLIPread.java
2018-03-22 14:07
1.4K
PARalyze.java
2018-03-22 14:07
27K
README-paralyzer-ncRNA1.txt
2018-04-27 16:57
30K
ReadGroup.java
2018-03-22 14:07
23K
Transliteration.java
2018-03-22 14:07
13K
build/
2018-03-22 14:11
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foo
2018-04-04 19:08
75M
get_modescore_hist1.r
2018-04-03 20:00
4.6K
get_modescore_hist_mRNA.r
2018-04-04 18:18
3.2K
get_modescore_hist_ncRNA1.r
2018-03-22 19:46
4.5K
mergeMyPar-dist-mRNA.sh
2018-04-04 19:24
249
mergeMyPar-dist.sh
2018-03-22 17:41
216
mergeMyPar-mRNA.sh
2018-03-26 17:45
117
mergeMyPar.sh
2018-03-22 17:41
107
mergeMyPar2-mRNA.sh
2018-03-26 20:08
7.0K
mergeMyPar2.sh
2018-03-22 17:41
6.8K
modscore-hist-0h-mRNA.png
2018-04-04 19:37
4.8K
modscore-hist-0h_all_reps.png
2018-03-22 19:45
5.3K
modscore-hist-2h-mRNA.png
2018-04-04 18:14
5.1K
modscore-hist-2h_all_reps-mRNA.png
2018-04-04 19:37
5.1K
modscore-hist-2h_all_reps.png
2018-03-22 19:46
5.5K
modscore-hist-6h-mRNA.png
2018-04-04 19:37
4.9K
modscore-hist-6h_all_reps.png
2018-03-22 19:46
5.3K
modscore-hist-IFN-mRNA.png
2018-04-04 19:37
4.9K
modscore-hist-IFN.png
2018-03-22 19:42
4.9K
modscore-hist-IL4-mRNA.png
2018-04-04 19:37
4.8K
modscore-hist-IL4.png
2018-03-22 19:43
5.0K
myp-all-mRNA-sampled.sh
2018-04-02 17:01
1.3K
myp-all-mRNA.sh
2018-03-26 16:29
1.2K
myp-all-ncRNA.sh
2018-03-26 16:28
1.2K
myp-all2.sh
2018-03-22 14:18
1.2K
myp.sh
2018-03-22 14:05
521
pvalue_AD_uniform_test_0h-mRNA.png
2018-04-04 19:37
27K
pvalue_AD_uniform_test_0h-mRNA.txt
2018-04-04 19:37
12K
pvalue_AD_uniform_test_0h_all_reps.png
2018-03-22 19:45
28K
pvalue_AD_uniform_test_0h_all_reps.txt
2018-03-22 19:45
12K
pvalue_AD_uniform_test_2h-mRNA.png
2018-04-04 18:14
29K
pvalue_AD_uniform_test_2h-mRNA.txt
2018-04-04 18:14
12K
pvalue_AD_uniform_test_2h_all_reps-mRNA.png
2018-04-04 19:37
28K
pvalue_AD_uniform_test_2h_all_reps-mRNA.txt
2018-04-04 19:37
12K
pvalue_AD_uniform_test_2h_all_reps.png
2018-03-22 19:46
28K
pvalue_AD_uniform_test_2h_all_reps.txt
2018-03-22 19:46
12K
pvalue_AD_uniform_test_6h-mRNA.png
2018-04-04 19:37
27K
pvalue_AD_uniform_test_6h-mRNA.txt
2018-04-04 19:37
12K
pvalue_AD_uniform_test_6h_all_reps.png
2018-03-22 19:46
28K
pvalue_AD_uniform_test_6h_all_reps.txt
2018-03-22 19:46
12K
pvalue_AD_uniform_test_IFN-mRNA.png
2018-04-04 19:37
26K
pvalue_AD_uniform_test_IFN-mRNA.txt
2018-04-04 19:37
12K
pvalue_AD_uniform_test_IFN.png
2018-03-22 19:42
25K
pvalue_AD_uniform_test_IFN.txt
2018-03-22 19:42
11K
pvalue_AD_uniform_test_IL4-mRNA.png
2018-04-04 19:37
27K
pvalue_AD_uniform_test_IL4-mRNA.txt
2018-04-04 19:37
12K
pvalue_AD_uniform_test_IL4.png
2018-03-22 19:43
26K
pvalue_AD_uniform_test_IL4.txt
2018-03-22 19:43
11K
res/
2018-04-04 19:47
-
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc
2018-03-22 19:59
686K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.bed
2018-03-22 19:59
329K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.bed
2018-03-22 20:00
327K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.maxAvg.bed
2018-03-22 20:00
175K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.maxAvg.bed.anno.csv
2018-03-23 12:55
186K
sh-clusters-0hrep1.txt2-mRNA.csv
2018-04-03 10:43
23M
sh-clusters-0hrep1.txt2-mRNA.csv.bed.gt5tc
2018-04-03 11:13
12M
sh-clusters-0hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2
2018-04-04 19:32
15M
sh-clusters-0hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-04-04 19:34
8.1M
sh-clusters-0hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-04-04 19:35
7.2M
sh-clusters-0hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-04-04 19:40
3.4M
sh-clusters-0hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt.anno.csv
2018-04-04 19:46
4.0M
sh-clusters-0hrep1.txt2.csv
2018-03-22 18:22
9.3M
sh-clusters-0hrep1.txt2.csv.bed.gt5tc
2018-03-22 18:23
5.4M
sh-clusters-0hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2
2018-03-22 19:36
6.7M
sh-clusters-0hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-03-22 19:37
3.5M
sh-clusters-0hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-03-22 19:37
2.8M
sh-clusters-0hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-03-22 19:58
836K
sh-clusters-0hrep1.txt2s0
2018-04-02 17:05
2.3M
sh-clusters-0hrep1.txt2s1
2018-04-02 17:08
2.3M
sh-clusters-0hrep1.txt2s2
2018-04-02 17:11
2.3M
sh-clusters-0hrep1.txt2s3
2018-04-02 17:14
2.2M
sh-clusters-0hrep1.txt2s4
2018-04-02 17:16
2.3M
sh-clusters-0hrep1.txt2s5
2018-04-02 17:19
2.3M
sh-clusters-0hrep1.txt2s6
2018-04-02 17:22
2.4M
sh-clusters-0hrep1.txt2s7
2018-04-02 17:24
2.3M
sh-clusters-0hrep1.txt2s8
2018-04-02 17:27
2.2M
sh-clusters-0hrep1.txt2s9
2018-04-02 17:30
2.3M
sh-clusters-0hrep1.txt20
2018-03-27 18:24
374K
sh-clusters-0hrep1.txt21
2018-03-27 18:28
350K
sh-clusters-0hrep1.txt22
2018-03-27 18:30
360K
sh-clusters-0hrep1.txt23
2018-03-27 18:34
343K
sh-clusters-0hrep1.txt24
2018-03-27 18:37
371K
sh-clusters-0hrep1.txt25
2018-03-27 18:40
354K
sh-clusters-0hrep1.txt26
2018-03-27 18:43
365K
sh-clusters-0hrep1.txt27
2018-03-27 18:46
354K
sh-clusters-0hrep1.txt28
2018-03-27 18:49
356K
sh-clusters-0hrep1.txt29
2018-03-27 18:52
348K
sh-clusters-0hrep2.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-04-03 19:59
7.3M
sh-clusters-0hrep2.txt2.csv
2018-03-22 18:22
6.5M
sh-clusters-0hrep2.txt2.csv.bed.gt5tc
2018-03-22 18:23
3.5M
sh-clusters-0hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2
2018-03-22 19:36
4.4M
sh-clusters-0hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-03-22 19:37
2.4M
sh-clusters-0hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-03-22 19:38
1.9M
sh-clusters-0hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-03-22 19:58
755K
sh-clusters-0hrep2.txt20
2018-03-22 16:06
661K
sh-clusters-0hrep2.txt21
2018-03-22 16:08
658K
sh-clusters-0hrep2.txt22
2018-03-22 16:09
704K
sh-clusters-0hrep2.txt23
2018-03-22 16:11
670K
sh-clusters-0hrep2.txt24
2018-03-22 16:13
644K
sh-clusters-0hrep2.txt25
2018-03-22 16:14
677K
sh-clusters-0hrep2.txt26
2018-03-22 16:16
674K
sh-clusters-0hrep2.txt27
2018-03-22 16:18
671K
sh-clusters-0hrep2.txt28
2018-03-22 16:20
668K
sh-clusters-0hrep2.txt29
2018-03-22 16:21
682K
sh-clusters-0hrep3.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-04-03 19:59
21M
sh-clusters-0hrep3.txt2.csv
2018-03-22 18:22
13M
sh-clusters-0hrep3.txt2.csv.bed.gt5tc
2018-03-22 18:23
8.4M
sh-clusters-0hrep3.txt2.csv3.bed.gt5tc.gt0.25TtoC2
2018-03-22 19:36
11M
sh-clusters-0hrep3.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-03-22 19:37
5.5M
sh-clusters-0hrep3.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-03-22 19:38
4.7M
sh-clusters-0hrep3.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-03-22 19:58
1.1M
sh-clusters-0hrep3.txt20
2018-03-22 16:29
1.3M
sh-clusters-0hrep3.txt21
2018-03-22 16:35
1.3M
sh-clusters-0hrep3.txt22
2018-03-22 16:39
1.4M
sh-clusters-0hrep3.txt23
2018-03-22 16:43
1.3M
sh-clusters-0hrep3.txt24
2018-03-22 16:48
1.3M
sh-clusters-0hrep3.txt25
2018-03-22 16:52
1.3M
sh-clusters-0hrep3.txt26
2018-03-22 16:56
1.3M
sh-clusters-0hrep3.txt27
2018-03-22 17:00
1.3M
sh-clusters-0hrep3.txt28
2018-03-22 17:05
1.3M
sh-clusters-0hrep3.txt29
2018-03-22 17:09
1.3M
sh-clusters-2h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc
2018-03-22 19:59
658K
sh-clusters-2h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.maxAvg.bed
2018-03-22 20:00
192K
sh-clusters-2h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.maxAvg.bed.anno.csv
2018-03-23 12:55
204K
sh-clusters-2hrep1.txt2-mRNA.csv
2018-04-03 10:46
31M
sh-clusters-2hrep1.txt2-mRNA.csv.bed.gt5tc
2018-04-03 11:13
15M
sh-clusters-2hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2
2018-04-04 19:32
18M
sh-clusters-2hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-04-04 19:34
9.8M
sh-clusters-2hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-04-04 19:35
8.7M
sh-clusters-2hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-04-04 19:40
4.5M
sh-clusters-2hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt.anno.csv
2018-04-04 19:46
5.2M
sh-clusters-2hrep1.txt2-test0
2018-03-26 19:16
3.4M
sh-clusters-2hrep1.txt2.csv
2018-03-22 18:22
7.2M
sh-clusters-2hrep1.txt2.csv.bed.gt5tc
2018-03-22 18:23
3.9M
sh-clusters-2hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2
2018-03-22 19:36
4.8M
sh-clusters-2hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-03-22 19:37
2.5M
sh-clusters-2hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-03-22 19:38
2.1M
sh-clusters-2hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-03-22 19:58
804K
sh-clusters-2hrep1.txt20
2018-04-02 17:52
3.1M
sh-clusters-2hrep1.txt21
2018-04-02 17:56
3.1M
sh-clusters-2hrep1.txt22
2018-04-02 18:00
3.1M
sh-clusters-2hrep1.txt23
2018-04-02 18:03
3.1M
sh-clusters-2hrep1.txt24
2018-04-02 18:06
3.2M
sh-clusters-2hrep1.txt25
2018-04-02 18:09
3.2M
sh-clusters-2hrep1.txt26
2018-04-02 18:13
3.2M
sh-clusters-2hrep1.txt27
2018-04-02 18:16
3.2M
sh-clusters-2hrep1.txt28
2018-04-02 18:19
3.1M
sh-clusters-2hrep1.txt29
2018-04-02 18:22
3.2M
sh-clusters-2hrep2.txt2-mRNA.csv.bed.gt5tc
2018-03-30 17:00
2.1M
sh-clusters-2hrep2.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-04-03 19:59
1.2M
sh-clusters-2hrep2.txt2.csv
2018-03-22 18:22
11M
sh-clusters-2hrep2.txt2.csv.bed.gt5tc
2018-03-22 18:23
6.1M
sh-clusters-2hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2
2018-03-22 19:36
7.6M
sh-clusters-2hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-03-22 19:37
4.1M
sh-clusters-2hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-03-22 19:38
3.3M
sh-clusters-2hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-03-22 19:58
868K
sh-clusters-2hrep2.txt20
2018-03-26 17:11
460K
sh-clusters-2hrep2.txt21
2018-03-26 17:13
450K
sh-clusters-2hrep2.txt22
2018-03-26 17:15
461K
sh-clusters-2hrep2.txt23
2018-03-26 17:18
427K
sh-clusters-2hrep2.txt24
2018-03-26 17:20
472K
sh-clusters-2hrep2.txt25
2018-03-26 17:22
460K
sh-clusters-2hrep2.txt26
2018-03-26 17:24
462K
sh-clusters-2hrep2.txt27
2018-03-26 17:26
455K
sh-clusters-2hrep2.txt28
2018-03-26 17:28
462K
sh-clusters-2hrep2.txt29
2018-03-26 17:31
436K
sh-clusters-2hrep3.txt2-mRNA.csv
2018-03-26 19:48
3.6M
sh-clusters-2hrep3.txt2-mRNA.csv.bed.gt5tc
2018-04-03 11:13
1.9M
sh-clusters-2hrep3.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-04-03 19:59
1.2M
sh-clusters-2hrep3.txt2.csv
2018-03-22 18:22
9.3M
sh-clusters-2hrep3.txt2.csv.bed.gt5tc
2018-03-22 18:23
5.4M
sh-clusters-2hrep3.txt2.csv3.bed.gt5tc.gt0.25TtoC2
2018-03-22 19:36
6.8M
sh-clusters-2hrep3.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-03-22 19:37
3.5M
sh-clusters-2hrep3.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-03-22 19:38
2.9M
sh-clusters-2hrep3.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-03-22 19:58
921K
sh-clusters-2hrep3.txt20
2018-03-26 17:59
249K
sh-clusters-2hrep3.txt21
2018-03-26 18:07
279K
sh-clusters-2hrep3.txt22
2018-03-26 18:19
314K
sh-clusters-2hrep3.txt23
2018-03-26 18:36
375K
sh-clusters-2hrep3.txt24
2018-03-26 18:44
429K
sh-clusters-2hrep3.txt25
2018-03-26 18:47
405K
sh-clusters-2hrep3.txt26
2018-03-26 18:50
418K
sh-clusters-2hrep3.txt27
2018-03-26 18:52
404K
sh-clusters-2hrep3.txt28
2018-03-26 18:55
405K
sh-clusters-2hrep3.txt29
2018-03-26 18:57
406K
sh-clusters-6h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc
2018-03-22 19:59
820K
sh-clusters-6h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.maxAvg.bed
2018-03-22 20:00
284K
sh-clusters-6h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.maxAvg.bed.anno.csv
2018-03-23 12:55
301K
sh-clusters-6hrep1.txt2-mRNA.csv
2018-04-03 10:46
23M
sh-clusters-6hrep1.txt2-mRNA.csv.bed.gt5tc
2018-04-03 11:13
12M
sh-clusters-6hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2
2018-04-04 19:32
15M
sh-clusters-6hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-04-04 19:34
8.4M
sh-clusters-6hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-04-04 19:35
7.5M
sh-clusters-6hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-04-04 19:40
3.4M
sh-clusters-6hrep1.txt2-mRNA.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt.anno.csv
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