Index of /fleming/DKlab/mr/parclip/paralyzer/PARalyzer_v1_1b
Name
Last modified
Size
Description
Parent Directory
-
0hrep1.log
2018-01-05 23:31
12K
0hrep1.log2
2018-01-12 23:57
12K
0hrep2.log
2018-01-05 23:58
7.1K
0hrep2.log2
2018-01-13 00:23
7.1K
0hrep3.log
2018-01-06 01:18
17K
0hrep3.log2
2018-01-13 01:43
17K
2hrep1.log
2018-01-05 18:26
8.6K
2hrep1.log2
2018-01-12 19:00
8.6K
2hrep2.log
2018-01-05 17:50
8.7K
2hrep2.log2
2018-01-12 18:26
8.7K
2hrep3.log
2018-01-05 17:05
10K
2hrep3.log2
2018-01-12 17:46
10K
6hrep1.log
2018-01-05 19:32
17K
6hrep1.log2
2018-01-12 20:05
17K
6hrep2.log
2018-01-05 20:33
13K
6hrep2.log2
2018-01-12 21:03
13K
6hrep3.log
2018-01-05 21:03
7.6K
6hrep3.log2
2018-01-12 21:32
7.6K
AlignedPARCLIPread.java
2018-01-03 19:49
3.0K
Chromosome.java
2010-10-07 19:26
1.2K
FilterBlock.java
2010-10-13 00:39
1.4K
Genome.java
2010-10-06 17:16
2.8K
GenomicBlock.java
2010-10-05 21:18
385
IFN.log
2018-01-05 21:35
7.3K
IFN.log-intron
2018-02-12 17:39
7.3K
IFN.log-intron2
2018-02-12 19:02
7.2K
IFN.log-intron3
2018-02-12 21:15
7.2K
IFN.log2
2018-01-12 22:03
7.3K
IGG.log
2018-01-05 16:24
7.1K
IGG.log2
2018-01-12 17:07
7.1K
IL4.log
2018-01-05 22:42
14K
IL4.log2
2018-01-12 23:07
14K
KDECluster.java
2010-11-01 19:37
6.9K
MIRNA.java
2010-10-13 22:39
327
MIRNAseedMatch.java
2010-10-13 20:14
805
MyTwoBitParser.java
2010-10-14 20:45
5.7K
PARCLIPbowtieParser.java
2018-01-04 18:17
4.8K
PARCLIPread.java
2018-01-03 19:36
1.4K
PARalyze.java
2018-01-04 19:30
27K
PARalyzer.sh
2011-03-01 18:08
1.5K
README
2011-06-28 20:48
11K
ReadGroup.java
2011-05-23 18:39
23K
Sample.ini
2011-06-28 20:54
1.0K
Transliteration.java
2010-09-09 22:26
13K
build/
2018-01-03 19:36
-
copy-ini-files.sh
2018-01-10 20:27
1.0K
foo
2018-01-30 12:48
12M
mergeMyPar-dist.sh
2018-01-30 12:25
216
mergeMyPar.sh
2018-01-24 15:14
107
mergeMyPar2.sh
2018-01-09 20:59
6.8K
myp-all-intron.log
2018-02-12 16:59
0
myp-all-intron.sh
2018-02-12 15:09
1.5K
myp-all.log
2018-01-05 15:59
0
myp-all.sh
2018-01-05 15:58
1.2K
myp-all2.sh
2018-01-12 12:05
1.1K
myp.sh
2018-01-04 20:38
521
omit-sig-back.awk
2018-01-30 12:20
33
res/
2018-04-10 18:06
-
sh-clusters-*txt2.csv.bed.noIGG
2018-01-24 15:05
0
sh-clusters-0h.flt.noIGG.unstranded.intersection.bed
2018-01-09 13:20
1.4M
sh-clusters-0h.flt.noIGG.unstranded.intersection12.bed1
2018-01-09 13:20
3.0M
sh-clusters-0h.flt.noIGG.unstranded.merged.bed
2018-01-08 18:02
62M
sh-clusters-0h.gt0.25TtoC.plus.noIGG.intersection-all.bed.gt5tc
2018-02-04 14:40
8.9M
sh-clusters-0h.gt0.25TtoC.plus.noIGG.intersection-all.bed.gt5tc.gt2of3
2018-02-04 14:40
492K
sh-clusters-0h.gt0.25TtoC.plus.noIGG.intersection-all.bed.gt5tc.gt2of3.anno.csv
2018-02-04 14:43
755K
sh-clusters-0h.gt0.25TtoC.plus.noIGG.intersection-all.bed.gt5tc.gt3of3
2018-02-04 14:41
26K
sh-clusters-0h.gt0.25TtoC.plus.noIGG.intersection-all.bed.gt5tc.gt3of3.anno.csv
2018-02-04 14:43
39K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc
2018-03-22 12:49
4.5M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.bed
2018-03-22 12:49
1.5M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.bed
2018-03-22 12:50
1.5M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.maxAvg.bed
2018-03-22 12:50
848K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.maxAvg.bed.anno.csv
2018-03-22 18:46
924K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.union.maxAvg.bed
2018-04-10 18:05
18M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.union.maxAvg.bed.anno.csv
2018-04-10 18:06
20M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.flt.intersection-all.bed3.gt5tc.details.merged.union.maxAvg.bed.anno.uqn.csv
2018-04-11 20:38
21M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed.gt5tc
2018-02-06 15:51
8.9M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed.gt5tc.gt2of3
2018-02-06 15:51
492K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed.gt5tc.gt2of3.anno.csv
2018-02-06 15:52
755K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed.gt5tc.gt3of3
2018-02-06 15:51
26K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed.gt5tc.gt3of3.anno.csv
2018-02-06 15:52
39K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed2.gt5tc
2018-02-16 18:32
12M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed2.gt5tc.details.bed
2018-02-23 16:30
7.7M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed2.gt5tc.details.merged.bed
2018-02-23 16:48
7.6M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed2.gt5tc.details.merged.maxAvg.bed
2018-02-23 17:15
4.0M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed2.gt5tc.details.merged.maxAvg.bed.anno.csv
2018-02-23 17:19
4.4M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed2.gt5tc.gt2of3
2018-02-16 18:33
747K
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed3.gt5tc
2018-03-13 19:56
12M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed3.gt5tc.details.bed
2018-03-13 19:57
8.3M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed3.gt5tc.details.merged.bed
2018-03-13 20:12
8.2M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed3.gt5tc.details.merged.maxAvg.bed
2018-03-13 20:45
4.2M
sh-clusters-0h.gt0.25TtoC2.plus.noIGG.intersection-all.bed3.gt5tc.details.merged.maxAvg.bed.anno.csv
2018-03-13 20:54
4.6M
sh-clusters-0h.noIGG.merged.bed
2018-01-08 17:35
124M
sh-clusters-0h.noIGG.plus.intersection-all.bed
2018-01-30 13:02
22M
sh-clusters-0h.noIGG.plus.intersection-all.bed.gt2of3
2018-01-24 18:37
1.8M
sh-clusters-0h.noIGG.plus.intersection-all.bed.gt2of3.anno.csv
2018-01-24 18:41
2.8M
sh-clusters-0h.noIGG.plus.intersection-all.bed.gt3of3
2018-01-24 18:40
131K
sh-clusters-0h.noIGG.plus.intersection-all.bed.gt3of3.anno.csv
2018-01-24 18:41
201K
sh-clusters-0h.noIGG.plus.intersection-all.bed.gt5tc
2018-01-30 13:36
12M
sh-clusters-0h.noIGG.plus.intersection-all.bed.gt5tc.gt2of3
2018-01-30 13:37
747K
sh-clusters-0h.noIGG.plus.intersection-all.bed.gt5tc.gt2of3.anno.csv
2018-01-30 13:40
1.1M
sh-clusters-0h.noIGG.plus.intersection-all.bed.gt5tc.gt3of3
2018-01-30 13:38
48K
sh-clusters-0h.noIGG.plus.intersection-all.bed.gt5tc.gt3of3.anno.csv
2018-01-30 13:40
74K
sh-clusters-0h.noIGG.unstranded.merged.bed
2018-01-08 17:59
0
sh-clusters-0hrep1-HAFNER_APPROACH.txt30
2018-01-05 15:03
2.9M
sh-clusters-0hrep1-HAFNER_APPROACH.txt31
2018-01-05 15:08
2.9M
sh-clusters-0hrep1-HAFNER_APPROACH.txt32
2018-01-05 15:13
2.9M
sh-clusters-0hrep1-HAFNER_APPROACH.txt33
2018-01-05 15:19
2.8M
sh-clusters-0hrep1-HAFNER_APPROACH.txt34
2018-01-05 15:23
2.9M
sh-clusters-0hrep1-HAFNER_APPROACH.txt35
2018-01-05 15:28
2.9M
sh-clusters-0hrep1-HAFNER_APPROACH.txt36
2018-01-05 15:33
2.9M
sh-clusters-0hrep1-HAFNER_APPROACH.txt37
2018-01-05 15:38
2.9M
sh-clusters-0hrep1-HAFNER_APPROACH.txt38
2018-01-05 15:43
2.8M
sh-clusters-0hrep1-HAFNER_APPROACH.txt39
2018-01-05 15:48
2.9M
sh-clusters-0hrep1.txt2.csv
2018-01-24 15:19
42M
sh-clusters-0hrep1.txt2.csv.bed
2018-01-30 12:42
42M
sh-clusters-0hrep1.txt2.csv.bed.gt5tc
2018-01-30 13:30
22M
sh-clusters-0hrep1.txt2.csv.bed.gt5tc.gt0.25TtoC
2018-02-04 14:14
16M
sh-clusters-0hrep1.txt2.csv.bed.gt5tc.gt0.25TtoC.plus
2018-02-04 14:34
8.7M
sh-clusters-0hrep1.txt2.csv.bed.gt5tc.gt0.25TtoC.plus.noIGG
2018-02-04 14:36
8.0M
sh-clusters-0hrep1.txt2.csv.bed.gt5tc.gt0.25TtoC2
2018-02-06 15:45
19M
sh-clusters-0hrep1.txt2.csv.bed.gt5tc.gt0.25TtoC2.plus
2018-02-06 15:48
10M
sh-clusters-0hrep1.txt2.csv.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-02-06 15:49
9.3M
sh-clusters-0hrep1.txt2.csv.bed.gt5tc.noIGG
2018-01-30 13:31
20M
sh-clusters-0hrep1.txt2.csv.bed.gt5tc.noIGG.plus
2018-01-30 13:35
10M
sh-clusters-0hrep1.txt2.csv.bed.noIGG
2018-01-30 12:43
36M
sh-clusters-0hrep1.txt2.csv.bed.noIGG.plus
2018-01-30 12:46
18M
sh-clusters-0hrep1.txt2.csv2.bed.gt5tc.gt0.25TtoC2
2018-02-16 18:23
26M
sh-clusters-0hrep1.txt2.csv2.bed.gt5tc.gt0.25TtoC2.plus
2018-02-16 18:29
14M
sh-clusters-0hrep1.txt2.csv2.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-02-16 18:30
12M
sh-clusters-0hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2
2018-03-13 19:50
28M
sh-clusters-0hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-03-13 19:53
15M
sh-clusters-0hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-03-13 19:54
13M
sh-clusters-0hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.anno.csv
2018-03-23 14:59
14M
sh-clusters-0hrep1.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-03-22 19:55
5.3M
sh-clusters-0hrep1.txt3.csv
2018-01-08 14:42
57M
sh-clusters-0hrep1.txt3.csv.bed
2018-01-08 15:20
57M
sh-clusters-0hrep1.txt3.csv.bed.flt
2018-01-08 17:45
22M
sh-clusters-0hrep1.txt3.csv.bed.flt.noIGG
2018-01-08 17:48
20M
sh-clusters-0hrep1.txt3.csv.bed.flt.noIGG.plus
2018-01-09 20:18
11M
sh-clusters-0hrep1.txt3.csv.bed.flt.noIGG.plus.anno.csv
2018-01-09 20:41
12M
sh-clusters-0hrep1.txt3.csv.bed.flt.noIGG.unstranded
2018-01-08 17:57
19M
sh-clusters-0hrep1.txt3.csv.bed.flt.noIGG.unstranded.anno.csv
2018-01-09 14:05
22M
sh-clusters-0hrep1.txt3.csv.bed.noIGG.bed
2018-01-08 15:27
44M
sh-clusters-0hrep1.txt20
2018-01-12 23:13
4.2M
sh-clusters-0hrep1.txt21
2018-01-12 23:19
4.1M
sh-clusters-0hrep1.txt22
2018-01-12 23:23
4.1M
sh-clusters-0hrep1.txt23
2018-01-12 23:29
4.1M
sh-clusters-0hrep1.txt24
2018-01-12 23:33
4.2M
sh-clusters-0hrep1.txt25
2018-01-12 23:38
4.1M
sh-clusters-0hrep1.txt26
2018-01-12 23:43
4.3M
sh-clusters-0hrep1.txt27
2018-01-12 23:47
4.2M
sh-clusters-0hrep1.txt28
2018-01-12 23:52
4.0M
sh-clusters-0hrep1.txt29
2018-01-12 23:57
4.2M
sh-clusters-0hrep1.txt30
2018-01-05 22:47
5.8M
sh-clusters-0hrep1.txt31
2018-01-05 22:52
5.7M
sh-clusters-0hrep1.txt32
2018-01-05 22:57
5.7M
sh-clusters-0hrep1.txt33
2018-01-05 23:02
5.6M
sh-clusters-0hrep1.txt34
2018-01-05 23:07
5.8M
sh-clusters-0hrep1.txt35
2018-01-05 23:12
5.7M
sh-clusters-0hrep1.txt36
2018-01-05 23:17
5.8M
sh-clusters-0hrep1.txt37
2018-01-05 23:21
5.7M
sh-clusters-0hrep1.txt38
2018-01-05 23:26
5.6M
sh-clusters-0hrep1.txt39
2018-01-05 23:31
5.8M
sh-clusters-0hrep2.txt2.csv
2018-01-24 15:19
23M
sh-clusters-0hrep2.txt2.csv.bed
2018-01-30 12:42
23M
sh-clusters-0hrep2.txt2.csv.bed.gt5tc
2018-01-30 13:30
12M
sh-clusters-0hrep2.txt2.csv.bed.gt5tc.gt0.25TtoC
2018-02-04 14:21
9.2M
sh-clusters-0hrep2.txt2.csv.bed.gt5tc.gt0.25TtoC.plus
2018-02-04 14:34
5.1M
sh-clusters-0hrep2.txt2.csv.bed.gt5tc.gt0.25TtoC.plus.noIGG
2018-02-04 14:36
4.7M
sh-clusters-0hrep2.txt2.csv.bed.gt5tc.gt0.25TtoC2
2018-02-06 15:45
11M
sh-clusters-0hrep2.txt2.csv.bed.gt5tc.gt0.25TtoC2.plus
2018-02-06 15:48
6.0M
sh-clusters-0hrep2.txt2.csv.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-02-06 15:50
5.5M
sh-clusters-0hrep2.txt2.csv.bed.gt5tc.noIGG
2018-01-30 13:31
11M
sh-clusters-0hrep2.txt2.csv.bed.gt5tc.noIGG.plus
2018-01-30 13:35
5.9M
sh-clusters-0hrep2.txt2.csv.bed.noIGG
2018-01-30 12:43
20M
sh-clusters-0hrep2.txt2.csv.bed.noIGG.plus
2018-01-30 12:46
10M
sh-clusters-0hrep2.txt2.csv2.bed.gt5tc.gt0.25TtoC2
2018-02-16 18:23
14M
sh-clusters-0hrep2.txt2.csv2.bed.gt5tc.gt0.25TtoC2.plus
2018-02-16 18:29
7.6M
sh-clusters-0hrep2.txt2.csv2.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-02-16 18:30
6.8M
sh-clusters-0hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2
2018-03-13 19:51
15M
sh-clusters-0hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus
2018-03-13 19:53
8.1M
sh-clusters-0hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG
2018-03-13 19:54
7.3M
sh-clusters-0hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.anno.csv
2018-03-23 14:59
8.0M
sh-clusters-0hrep2.txt2.csv3.bed.gt5tc.gt0.25TtoC2.plus.noIGG.flt
2018-03-22 19:55
3.4M
sh-clusters-0hrep2.txt3.csv
2018-01-08 15:10
32M
sh-clusters-0hrep2.txt3.csv.bed
2018-01-08 15:20
32M
sh-clusters-0hrep2.txt3.csv.bed.flt
2018-01-08 17:45
12M
sh-clusters-0hrep2.txt3.csv.bed.flt.noIGG
2018-01-08 17:48
11M
sh-clusters-0hrep2.txt3.csv.bed.flt.noIGG.plus
2018-01-09 20:18
6.1M
sh-clusters-0hrep2.txt3.csv.bed.flt.noIGG.plus.anno.csv
2018-01-09 20:41
7.0M
sh-clusters-0hrep2.txt3.csv.bed.flt.noIGG.unstranded
2018-01-08 17:57
11M
sh-clusters-0hrep2.txt3.csv.bed.flt.noIGG.unstranded.anno.csv
2018-01-09 14:05
12M
sh-clusters-0hrep2.txt3.csv.bed.noIGG.bed
2018-01-08 15:27
25M
sh-clusters-0hrep2.txt20
2018-01-13 00:00
2.3M
sh-clusters-0hrep2.txt21
2018-01-13 00:02
2.3M
sh-clusters-0hrep2.txt22
2018-01-13 00:05
2.3M
sh-clusters-0hrep2.txt23
2018-01-13 00:08
2.2M
sh-clusters-0hrep2.txt24
2018-01-13 00:10
2.3M
sh-clusters-0hrep2.txt25
2018-01-13 00:13
2.3M
sh-clusters-0hrep2.txt26
2018-01-13 00:16
2.3M
sh-clusters-0hrep2.txt27
2018-01-13 00:18
2.3M
sh-clusters-0hrep2.txt28
2018-01-13 00:21
2.2M
sh-clusters-0hrep2.txt29
2018-01-13 00:23
2.3M
sh-clusters-0hrep2.txt30
2018-01-05 23:34
3.2M
sh-clusters-0hrep2.txt31
2018-01-05 23:37
3.2M
sh-clusters-0hrep2.txt32
2018-01-05 23:39
3.2M
sh-clusters-0hrep2.txt33
2018-01-05 23:42
3.1M
sh-clusters-0hrep2.txt34
2018-01-05 23:44
3.2M
sh-clusters-0hrep2.txt35
2018-01-05 23:47
3.2M
sh-clusters-0hrep2.txt36
2018-01-05 23:50
3.3M
sh-clusters-0hrep2.txt37
2018-01-05 23:52
3.2M
sh-clusters-0hrep2.txt38
2018-01-05 23:55
3.1M
sh-clusters-0hrep2.txt39
2018-01-05 23:58
3.2M
sh-clusters-0hrep3.txt2.csv
2018-01-24 15:19
62M
sh-clusters-0hrep3.txt2.csv.bed
2018-01-30 12:42
62M
sh-clusters-0hrep3.txt2.csv.bed.gt5tc
2018-01-30 13:30
34M
sh-clusters-0hrep3.txt2.csv.bed.gt5tc.gt0.25TtoC
2018-02-04 14:21
26M
sh-clusters-0hrep3.txt2.csv.bed.gt5tc.gt0.25TtoC.plus
2018-02-04 14:34
15M
sh-clusters-0hrep3.txt2.csv.bed.gt5tc.gt0.25TtoC.plus.noIGG
2018-02-04 14:36
14M
sh-clusters-0hrep3.txt2.csv.bed.gt5tc.gt0.25TtoC2
2018-02-06 15:46
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