Index of /fleming/DKlab/mr/parclip/raw

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]02017-10-21 17:27 0  
[ ]0h.bowtie2017-09-23 01:26 1.9G 
[ ]0h.bowtie_stats2017-09-23 01:26 8.4K 
[ ]0h.manymaps2017-09-23 01:26 9.3M 
[ ]0hrep1-4p.bowtie2017-09-25 20:18 1.2G 
[ ]0hrep1-4p.bowtie_stats2017-09-25 20:18 8.0K 
[ ]0hrep1-4p.manymaps2017-09-25 20:18 1.6M 
[ ]0hrep1-cutad-k-v3.bowtie2017-10-27 16:46 1.7M 
[ ]0hrep1-cutad-k-v3.bowtie_stats2017-10-27 16:46 1.0K 
[ ]0hrep1-cutad-k-v3.manymaps2017-10-27 16:46 182K 
[ ]0hrep1-cutad.fastq.fa2017-10-27 16:32 590M 
[ ]0hrep1-cutad.fastq.fa.coll2017-10-27 16:33 533M 
[ ]0hrep1-q20-m15.fa2018-10-15 16:53 454M 
[ ]0hrep1-q20-m15.fastq2018-10-12 16:18 773M 
[ ]0hrep1-q20-m15.log2018-10-12 16:18 2.1K 
[ ]0hrep1.bow.log2017-09-21 20:08 183  
[ ]0hrep1.bowtie2017-09-21 20:48 9.7M 
[ ]0hrep1.fastq2017-09-21 19:56 755M 
[ ]0hrep1.log2017-09-21 19:56 2.1K 
[ ]0hrep1F-4p.bowtie2017-09-27 14:18 1.2G 
[ ]0hrep1F-4p.bowtie_stats2017-09-27 14:18 7.9K 
[ ]0hrep1F-4p.manymaps2017-09-27 14:18 1.5M 
[ ]0hrep1F-4p.sam2017-09-28 12:50 1.0G 
[ ]0hrep1F-4p3.bowtie2017-09-28 23:22 1.5G 
[ ]0hrep1F-4p3.bowtie_stats2017-09-28 23:22 8.5K 
[ ]0hrep1F-4p3.conversion.stats2017-10-03 18:58 251  
[ ]0hrep1F-4p3.manymaps2017-09-28 23:22 8.6M 
[ ]0hrep1F-4p3.sam2017-09-29 11:37 1.1G 
[ ]0hrep1F-4p3.sam.bam2017-10-05 15:29 127M 
[ ]0hrep1F-4p3.sam.bam.bai2017-10-05 15:29 4.8M 
[ ]0hrep1F-4p3.sam.bam.conversion.stats2017-10-05 15:32 251  
[ ]0hrep1F-4p3b.bowtie2017-10-18 21:16 1.5G 
[ ]0hrep1F-4p3b.bowtie_stats2017-10-18 21:16 8.5K 
[ ]0hrep1F-4p3b.manymaps2017-10-18 21:16 8.6M 
[ ]0hrep1F-4p4.bam2017-10-03 16:27 4.6M 
[ ]0hrep1F-4p4.bam.bai2017-10-03 16:27 2.2M 
[ ]0hrep1F-4p4.bowtie2017-10-03 16:15 76M 
[ ]0hrep1F-4p4.bowtie_stats2017-10-03 16:15 8.0K 
[ ]0hrep1F-4p4.conversion.stats2017-10-03 18:07 228  
[ ]0hrep1F-4p4.manymaps2017-10-03 16:15 214K 
[ ]0hrep1F-4p5.bam2017-10-03 19:50 4.6M 
[ ]0hrep1F-4p5.bam.bai2017-10-03 19:55 2.1M 
[ ]0hrep1F-4p5.bowtie2017-10-03 17:42 76M 
[ ]0hrep1F-4p5.bowtie_stats2017-10-03 17:42 8.0K 
[ ]0hrep1F-4p5.conversion.stats2017-10-03 19:58 231  
[ ]0hrep1F-4p5.manymaps2017-10-03 17:42 210K 
[ ]0hrep1F-4p6.bam2017-10-03 19:29 5.3M 
[ ]0hrep1F-4p6.bam.bai2017-10-03 19:29 2.3M 
[ ]0hrep1F-4p6.bowtie2017-10-03 19:29 100M 
[ ]0hrep1F-4p6.bowtie_stats2017-10-03 19:29 8.0K 
[ ]0hrep1F-4p6.conversion.stats2017-10-03 19:32 233  
[ ]0hrep1F-4p6.manymaps2017-10-03 19:29 153K 
[ ]0hrep1F-4p7.bam2017-10-03 21:49 87M 
[ ]0hrep1F-4p7.bam.bai2017-10-03 22:07 4.8M 
[ ]0hrep1F-4p7.bowtie2017-10-03 21:44 1.1G 
[ ]0hrep1F-4p7.bowtie_stats2017-10-03 21:44 8.4K 
[ ]0hrep1F-4p7.conversion.stats2017-10-03 22:11 251  
[ ]0hrep1F-4p7.manymaps2017-10-03 21:44 5.9M 
[ ]0hrep1F-4p8.bam2017-10-03 20:15 2.8M 
[ ]0hrep1F-4p8.bam.bai2017-10-03 20:15 1.9M 
[ ]0hrep1F-4p8.bowtie2017-10-03 20:14 41M 
[ ]0hrep1F-4p8.bowtie_stats2017-10-03 20:14 7.5K 
[ ]0hrep1F-4p8.conversion.stats2017-10-03 20:15 0  
[ ]0hrep1F-4p8.manymaps2017-10-03 20:14 46K 
[ ]0hrep1F-4p9.bam2017-10-03 21:52 34M 
[ ]0hrep1F-4p9.bam.bai2017-10-03 22:09 4.5M 
[ ]0hrep1F-4p9.bowtie2017-10-03 21:51 472M 
[ ]0hrep1F-4p9.bowtie_stats2017-10-03 21:51 8.3K 
[ ]0hrep1F-4p9.conversion.stats2017-10-03 22:12 249  
[ ]0hrep1F-4p9.manymaps2017-10-03 21:51 1.9M 
[ ]0hrep1F-4p10.bam2017-10-04 11:42 16M 
[ ]0hrep1F-4p10.bam.bai2017-10-04 11:42 3.6M 
[ ]0hrep1F-4p10.bowtie2017-10-04 11:41 234M 
[ ]0hrep1F-4p10.bowtie_stats2017-10-04 11:41 8.3K 
[ ]0hrep1F-4p10.conversion.stats2017-10-04 11:44 239  
[ ]0hrep1F-4p10.manymaps2017-10-04 11:41 848K 
[ ]0hrep1F-4p10.sam2017-10-04 19:36 193M 
[ ]0hrep1F-4p10.sam.bam2017-10-05 14:31 16M 
[ ]0hrep1F-4p10.sam.bam.bai2017-10-05 14:31 3.6M 
[ ]0hrep1F-4p10.sam.bam.conversion.stats2017-10-05 14:34 239  
[ ]0hrep1F-bt1.bam2017-10-03 19:39 3.6M 
[ ]0hrep1F-bt1.bam.bai2017-10-03 19:39 812K 
[ ]0hrep1F-bt1.conversion.stats2017-10-03 19:40 90  
[ ]0hrep1b.bowtie2017-09-25 01:48 1.9G 
[ ]0hrep1b.bowtie_stats2017-09-25 01:48 6.4K 
[TXT]0hrep1filt2_QV_analysis.txt2017-10-03 13:52 20K 
[ ]0hrep1filt2_T_F3.csfasta2017-10-19 15:21 746M 
[ ]0hrep1filt2_T_F3.csfasta.coll2017-10-19 15:21 675M 
[ ]0hrep1filt2_T_F3_QV.qual2017-10-03 13:52 105M 
[ ]0hrep1filt2_U_F3.csfasta2017-10-03 13:52 718M 
[ ]0hrep1filt2_U_F3_QV.qual2017-10-03 13:52 1.7G 
[TXT]0hrep1filt2b_QV_analysis.txt2017-10-18 18:37 22K 
[ ]0hrep1filt2b_T_F3.csfasta2017-10-18 18:37 746M 
[ ]0hrep1filt2b_T_F3.csfasta.coll2017-10-18 20:44 675M 
[ ]0hrep1filt2b_T_F3_QV.qual2017-10-18 18:37 1.7G 
[ ]0hrep1filt2b_U_F3.csfasta2017-10-18 18:37 16M 
[ ]0hrep1filt2b_U_F3_QV.qual2017-10-18 18:37 37M 
[TXT]0hrep1filt3_QV_analysis.txt2017-10-03 16:52 20K 
[ ]0hrep1filt3_T_F3.csfasta2017-10-03 16:52 44M 
[ ]0hrep1filt3_T_F3.csfasta.coll2017-10-03 17:33 39M 
[ ]0hrep1filt3_T_F3_QV.qual2017-10-03 16:52 104M 
[ ]0hrep1filt3_U_F3.csfasta2017-10-03 16:52 718M 
[ ]0hrep1filt3_U_F3_QV.qual2017-10-03 16:52 1.7G 
[TXT]0hrep1filt4_QV_analysis.txt2017-10-03 17:09 22K 
[ ]0hrep1filt4_T_F3.csfasta2017-10-03 17:09 569M 
[ ]0hrep1filt4_T_F3.csfasta.coll2017-10-03 20:47 514M 
[ ]0hrep1filt4_T_F3_QV.qual2017-10-03 17:09 1.3G 
[ ]0hrep1filt4_U_F3.csfasta2017-10-03 17:09 193M 
[ ]0hrep1filt4_U_F3_QV.qual2017-10-03 17:09 458M 
[TXT]0hrep1filt5_QV_analysis.txt2017-10-03 20:28 22K 
[ ]0hrep1filt5_T_F3.csfasta2017-10-03 20:28 621M 
[ ]0hrep1filt5_T_F3_QV.qual2017-10-03 20:28 1.4G 
[ ]0hrep1filt5_U_F3.csfasta2017-10-03 20:28 141M 
[ ]0hrep1filt5_U_F3_QV.qual2017-10-03 20:28 334M 
[TXT]0hrep1filt6_QV_analysis.txt2017-10-03 20:46 21K 
[ ]0hrep1filt6_T_F3.csfasta2017-10-03 20:46 241M 
[ ]0hrep1filt6_T_F3.csfasta.coll2017-10-03 21:01 217M 
[ ]0hrep1filt6_T_F3_QV.qual2017-10-03 20:46 575M 
[ ]0hrep1filt6_U_F3.csfasta2017-10-03 20:46 521M 
[ ]0hrep1filt6_U_F3_QV.qual2017-10-03 20:46 1.2G 
[TXT]0hrep1filt7_QV_analysis.txt2017-10-04 11:18 21K 
[ ]0hrep1filt7_T_F3.csfasta2017-10-04 11:18 126M 
[ ]0hrep1filt7_T_F3.csfasta.coll2017-10-04 13:56 113M 
[ ]0hrep1filt7_T_F3_QV.qual2017-10-04 11:18 301M 
[ ]0hrep1filt7_U_F3.csfasta2017-10-04 11:18 636M 
[ ]0hrep1filt7_U_F3_QV.qual2017-10-04 11:18 1.5G 
[TXT]0hrep1filt_QV_analysis.txt2017-09-26 20:30 21K 
[ ]0hrep1filt_T_F3.csfasta2017-09-26 20:30 326M 
[ ]0hrep1filt_T_F3_QV.qual2017-09-26 20:30 783M 
[ ]0hrep1filt_U_F3.csfasta2017-09-26 20:30 436M 
[ ]0hrep1filt_U_F3_QV.qual2017-09-26 20:30 1.0G 
[ ]0hrep2-4p.bowtie2017-09-25 21:26 654M 
[ ]0hrep2-4p.bowtie_stats2017-09-25 21:26 7.6K 
[ ]0hrep2-4p.manymaps2017-09-25 21:26 1.2M 
[ ]0hrep2-cutad-k-v3.bowtie2017-10-27 18:10 747M 
[ ]0hrep2-cutad-k-v3.bowtie_stats2017-10-27 18:10 8.8K 
[ ]0hrep2-cutad-k-v3.manymaps2017-10-27 18:10 4.8M 
[ ]0hrep2-cutad.fastq.fa2017-10-27 16:33 306M 
[ ]0hrep2-cutad.fastq.fa.coll2017-10-27 16:33 276M 
[ ]0hrep2-q20-m15.fa2018-10-15 16:53 228M 
[ ]0hrep2-q20-m15.fastq2018-10-12 16:20 386M 
[ ]0hrep2-q20-m15.log2018-10-12 16:20 2.0K 
[ ]0hrep2.bowtie2017-09-22 21:22 966M 
[ ]0hrep2.bowtie-only2017-09-21 21:08 7.5M 
[ ]0hrep2.bowtie_stats2017-09-22 21:22 8.3K 
[ ]0hrep2.fastq2017-09-21 20:40 374M 
[ ]0hrep2.log2017-09-21 20:40 2.0K 
[ ]0hrep2.manymaps2017-09-22 21:22 5.1M 
[ ]0hrep2F-4p.bowtie2017-09-27 15:36 640M 
[ ]0hrep2F-4p.bowtie_stats2017-09-27 15:36 7.6K 
[ ]0hrep2F-4p.manymaps2017-09-27 15:36 1.1M 
[ ]0hrep2F-4p.sam2017-09-28 12:51 526M 
[ ]0hrep2F-4p3.bowtie2017-09-29 00:55 726M 
[ ]0hrep2F-4p3.bowtie_stats2017-09-29 00:55 8.2K 
[ ]0hrep2F-4p3.manymaps2017-09-29 00:55 2.9M 
[ ]0hrep2F-4p3.sam2017-09-29 11:38 550M 
[ ]0hrep2F-4p3.sam.bam2017-10-05 15:33 71M 
[ ]0hrep2F-4p3.sam.bam.bai2017-10-05 15:33 4.8M 
[ ]0hrep2F-4p3.sam.bam.conversion.stats2017-10-05 15:36 250  
[ ]0hrep2F-4p10.bowtie2017-10-04 14:34 174M 
[ ]0hrep2F-4p10.bowtie_stats2017-10-04 14:34 7.9K 
[ ]0hrep2F-4p10.manymaps2017-10-04 14:34 567K 
[ ]0hrep2F-4p10.sam2017-10-04 19:36 140M 
[ ]0hrep2F-4p10.sam.bam2017-10-05 14:34 12M 
[ ]0hrep2F-4p10.sam.bam.bai2017-10-05 14:34 3.4M 
[ ]0hrep2F-4p10.sam.bam.conversion.stats2017-10-05 14:37 239  
[TXT]0hrep2filt2_QV_analysis.txt2017-09-27 12:27 21K 
[ ]0hrep2filt2_T_F3.csfasta2017-09-27 12:27 353M 
[ ]0hrep2filt2_T_F3.csfasta.coll2017-09-28 19:41 319M 
[ ]0hrep2filt2_T_F3_QV.qual2017-09-27 12:27 843M 
[ ]0hrep2filt2_U_F3.csfasta2017-09-27 12:27 9.5M 
[ ]0hrep2filt2_U_F3_QV.qual2017-09-27 12:27 22M 
[TXT]0hrep2filt2b_QV_analysis.txt2017-10-18 19:01 21K 
[ ]0hrep2filt2b_T_F3.csfasta2017-10-18 19:01 353M 
[ ]0hrep2filt2b_T_F3.csfasta.coll2017-10-18 20:44 319M 
[ ]0hrep2filt2b_T_F3_QV.qual2017-10-18 19:01 843M 
[ ]0hrep2filt2b_U_F3.csfasta2017-10-18 19:01 9.5M 
[ ]0hrep2filt2b_U_F3_QV.qual2017-10-18 19:01 22M 
[TXT]0hrep2filt7_QV_analysis.txt2017-10-04 13:03 20K 
[ ]0hrep2filt7_T_F3.csfasta2017-10-04 13:03 91M 
[ ]0hrep2filt7_T_F3.csfasta.coll2017-10-04 13:57 81M 
[ ]0hrep2filt7_T_F3_QV.qual2017-10-04 13:03 216M 
[ ]0hrep2filt7_U_F3.csfasta2017-10-04 13:03 272M 
[ ]0hrep2filt7_U_F3_QV.qual2017-10-04 13:03 648M 
[ ]0hrep3-4p.bowtie2017-09-26 00:46 1.9G 
[ ]0hrep3-4p.bowtie_stats2017-09-26 00:46 8.0K 
[ ]0hrep3-4p.manymaps2017-09-26 00:46 2.2M 
[ ]0hrep3-cutad-k-v3.bowtie2017-10-27 21:56 2.1G 
[ ]0hrep3-cutad-k-v3.bowtie_stats2017-10-27 21:56 8.9K 
[ ]0hrep3-cutad-k-v3.manymaps2017-10-27 21:56 9.5M 
[ ]0hrep3-cutad.fastq.fa2017-10-27 16:33 857M 
[ ]0hrep3-cutad.fastq.fa.coll2017-10-27 16:34 778M 
[ ]0hrep3-q20-m15.fa2018-10-15 16:53 656M 
[ ]0hrep3-q20-m15.fastq2018-10-12 16:27 1.1G 
[ ]0hrep3-q20-m15.log2018-10-12 16:27 2.1K 
[ ]0hrep3.bowtie2017-09-23 04:35 3.0G 
[ ]0hrep3.bowtie-only2017-09-21 21:33 17M 
[ ]0hrep3.bowtie_stats2017-09-23 04:35 8.4K 
[ ]0hrep3.fastq2017-09-21 20:46 1.1G 
[ ]0hrep3.log2017-09-21 20:46 2.1K 
[ ]0hrep3.manymaps2017-09-23 04:35 9.8M 
[ ]0hrep3F-4p.bowtie2017-09-28 01:00 1.8G 
[ ]0hrep3F-4p.bowtie_stats2017-09-28 01:00 8.0K 
[ ]0hrep3F-4p.manymaps2017-09-28 01:00 2.1M 
[ ]0hrep3F-4p.sam2017-09-28 12:55 1.5G 
[ ]0hrep3F-4p3.bowtie2017-09-29 05:17 2.4G 
[ ]0hrep3F-4p3.bowtie_stats2017-09-29 05:17 8.5K 
[ ]0hrep3F-4p3.manymaps2017-09-29 05:17 8.3M 
[ ]0hrep3F-4p3.sam2017-09-29 11:43 1.7G 
[ ]0hrep3F-4p3.sam.bam2017-10-05 15:38 175M 
[ ]0hrep3F-4p3.sam.bam.bai2017-10-05 15:38 4.8M 
[ ]0hrep3F-4p3.sam.bam.conversion.stats2017-10-05 15:41 256  
[ ]0hrep3F-4p10.bowtie2017-10-04 15:11 415M 
[ ]0hrep3F-4p10.bowtie_stats2017-10-04 15:11 8.4K 
[ ]0hrep3F-4p10.manymaps2017-10-04 15:11 956K 
[ ]0hrep3F-4p10.sam2017-10-04 16:28 329M 
[ ]0hrep3F-4p10.sam.bam2017-10-05 14:37 24M 
[ ]0hrep3F-4p10.sam.bam.bai2017-10-05 14:37 4.0M 
[ ]0hrep3F-4p10.sam.bam.conversion.stats2017-10-05 14:40 245  
[TXT]0hrep3filt2_QV_analysis.txt2017-09-27 12:57 22K 
[ ]0hrep3filt2_T_F3.csfasta2017-09-27 12:57 1.1G 
[ ]0hrep3filt2_T_F3.csfasta.coll2017-09-28 19:43 1.0G 
[ ]0hrep3filt2_T_F3_QV.qual2017-09-27 12:57 2.6G 
[ ]0hrep3filt2_U_F3.csfasta2017-09-27 12:57 21M 
[ ]0hrep3filt2_U_F3_QV.qual2017-09-27 12:57 48M 
[TXT]0hrep3filt2b_QV_analysis.txt2017-10-18 19:33 22K 
[ ]0hrep3filt2b_T_F3.csfasta2017-10-18 19:33 1.1G 
[ ]0hrep3filt2b_T_F3.csfasta.coll2017-10-18 20:46 1.0G 
[ ]0hrep3filt2b_T_F3_QV.qual2017-10-18 19:33 2.6G 
[ ]0hrep3filt2b_U_F3.csfasta2017-10-18 19:33 21M 
[ ]0hrep3filt2b_U_F3_QV.qual2017-10-18 19:33 48M 
[TXT]0hrep3filt7_QV_analysis.txt2017-10-04 13:24 21K 
[ ]0hrep3filt7_T_F3.csfasta2017-10-04 13:24 212M 
[ ]0hrep3filt7_T_F3.csfasta.coll2017-10-04 13:57 190M 
[ ]0hrep3filt7_T_F3_QV.qual2017-10-04 13:24 506M 
[ ]0hrep3filt7_U_F3.csfasta2017-10-04 13:24 905M 
[ ]0hrep3filt7_U_F3_QV.qual2017-10-04 13:24 2.1G 
[ ]0hrepl1.bowtie-old.bam2017-10-02 19:50 172M 
[ ]0hrepl1.bowtie-old.bam.bai2017-10-02 19:50 4.8M 
[ ]0hrepl1.bowtie-old.sam2017-10-02 19:48 1.8G 
[ ]2hrep1-4p.bowtie2017-09-26 02:16 898M 
[ ]2hrep1-4p.bowtie_stats2017-09-26 02:16 8.1K 
[ ]2hrep1-4p.manymaps2017-09-26 02:16 2.6M 
[ ]2hrep1-cutad-k-v3.bowtie2017-10-27 23:55 944M 
[ ]2hrep1-cutad-k-v3.bowtie_stats2017-10-27 23:55 8.9K 
[ ]2hrep1-cutad-k-v3.manymaps2017-10-27 23:55 5.7M 
[ ]2hrep1-cutad.fastq.fa2017-10-27 16:34 402M 
[ ]2hrep1-cutad.fastq.fa.coll2017-10-27 16:35 363M 
[ ]2hrep1-q20-m15.fa2018-10-24 18:19 309M 
[ ]2hrep1-q20-m15.fastq2018-10-12 16:29 526M 
[ ]2hrep1-q20-m15.log2018-10-12 16:29 2.0K 
[ ]2hrep1F-4p.bowtie2017-09-28 02:46 883M 
[ ]2hrep1F-4p.bowtie_stats2017-09-28 02:46 8.1K 
[ ]2hrep1F-4p.manymaps2017-09-28 02:46 2.5M 
[ ]2hrep1F-4p.sam2017-09-28 15:14 721M 
[ ]2hrep1F-4p3.bowtie2017-09-29 07:03 947M 
[ ]2hrep1F-4p3.bowtie_stats2017-09-29 07:03 8.6K 
[ ]2hrep1F-4p3.manymaps2017-09-29 07:03 4.9M 
[ ]2hrep1F-4p3.sam2017-09-29 11:46 735M 
[ ]2hrep1F-4p3.sam.bam2017-10-05 15:42 90M 
[ ]2hrep1F-4p3.sam.bam.bai2017-10-05 15:42 4.8M 
[ ]2hrep1F-4p3.sam.bam.conversion.stats2017-10-05 15:45 249  
[ ]2hrep1F-4p10.bowtie2017-10-04 15:33 229M 
[ ]2hrep1F-4p10.bowtie_stats2017-10-04 15:33 8.5K 
[ ]2hrep1F-4p10.manymaps2017-10-04 15:33 1.1M 
[ ]2hrep1F-4p10.sam2017-10-04 19:37 188M 
[ ]2hrep1F-4p10.sam.bam2017-10-05 14:40 16M 
[ ]2hrep1F-4p10.sam.bam.bai2017-10-05 14:40 3.7M 
[ ]2hrep1F-4p10.sam.bam.conversion.stats2017-10-05 14:43 239  
[TXT]2hrep1filt2_QV_analysis.txt2017-09-27 13:09 21K 
[ ]2hrep1filt2_T_F3.csfasta2017-09-27 13:09 475M 
[ ]2hrep1filt2_T_F3.csfasta.coll2017-09-28 19:43 429M 
[ ]2hrep1filt2_T_F3_QV.qual2017-09-27 13:09 1.1G 
[ ]2hrep1filt2_U_F3.csfasta2017-09-27 13:09 10M 
[ ]2hrep1filt2_U_F3_QV.qual2017-09-27 13:09 23M 
[TXT]2hrep1filt2b_QV_analysis.txt2017-10-18 19:47 21K 
[ ]2hrep1filt2b_T_F3.csfasta2017-10-18 19:47 475M 
[ ]2hrep1filt2b_T_F3.csfasta.coll2017-10-18 20:46 429M 
[ ]2hrep1filt2b_T_F3_QV.qual2017-10-18 19:47 1.1G 
[ ]2hrep1filt2b_U_F3.csfasta2017-10-18 19:47 10M 
[ ]2hrep1filt2b_U_F3_QV.qual2017-10-18 19:47 23M 
[TXT]2hrep1filt7_QV_analysis.txt2017-10-04 13:34 20K 
[ ]2hrep1filt7_T_F3.csfasta2017-10-04 13:34 122M 
[ ]2hrep1filt7_T_F3.csfasta.coll2017-10-04 13:57 109M 
[ ]2hrep1filt7_T_F3_QV.qual2017-10-04 13:34 292M 
[ ]2hrep1filt7_U_F3.csfasta2017-10-04 13:34 363M 
[ ]2hrep1filt7_U_F3_QV.qual2017-10-04 13:34 868M 
[ ]2hrep2-4p.bowtie2017-09-26 03:49 872M 
[ ]2hrep2-4p.bowtie_stats2017-09-26 03:49 7.9K 
[ ]2hrep2-4p.manymaps2017-09-26 03:49 1.8M 
[ ]2hrep2-cutad-k-v3.bowtie2017-10-28 02:04 1.0G 
[ ]2hrep2-cutad-k-v3.bowtie_stats2017-10-28 02:04 8.9K 
[ ]2hrep2-cutad-k-v3.manymaps2017-10-28 02:04 6.3M 
[ ]2hrep2-cutad.fastq.fa2017-10-27 16:35 443M 
[ ]2hrep2-cutad.fastq.fa.coll2017-10-27 16:35 400M 
[ ]2hrep2-q20-m15.fa2018-10-24 18:19 306M 
[ ]2hrep2-q20-m15.fastq2018-10-12 16:32 518M 
[ ]2hrep2-q20-m15.log2018-10-12 16:32 2.0K 
[ ]2hrep2F-4p.bowtie2017-09-28 04:32 824M 
[ ]2hrep2F-4p.bowtie_stats2017-09-28 04:32 7.9K 
[ ]2hrep2F-4p.manymaps2017-09-28 04:32 1.7M 
[ ]2hrep2F-4p.sam2017-09-28 15:16 685M 
[ ]2hrep2F-4p3.bowtie2017-09-29 08:51 946M 
[ ]2hrep2F-4p3.bowtie_stats2017-09-29 08:51 8.4K 
[ ]2hrep2F-4p3.manymaps2017-09-29 08:51 5.1M 
[ ]2hrep2F-4p3.sam2017-09-29 11:48 723M 
[ ]2hrep2F-4p3.sam.bam2017-10-05 15:46 100M 
[ ]2hrep2F-4p3.sam.bam.bai2017-10-05 15:46 4.8M 
[ ]2hrep2F-4p3.sam.bam.conversion.stats2017-10-05 15:49 251  
[ ]2hrep2F-4p10.bowtie2017-10-04 16:01 292M 
[ ]2hrep2F-4p10.bowtie_stats2017-10-04 16:01 8.2K 
[ ]2hrep2F-4p10.manymaps2017-10-04 16:01 1.0M 
[ ]2hrep2F-4p10.sam2017-10-04 19:37 234M 
[ ]2hrep2F-4p10.sam.bam2017-10-05 14:43 22M 
[ ]2hrep2F-4p10.sam.bam.bai2017-10-05 14:43 4.1M 
[ ]2hrep2F-4p10.sam.bam.conversion.stats2017-10-05 14:45 238  
[TXT]2hrep2filt2_QV_analysis.txt2017-09-27 13:22 22K 
[ ]2hrep2filt2_T_F3.csfasta2017-09-27 13:22 467M 
[ ]2hrep2filt2_T_F3.csfasta.coll2017-09-28 19:44 422M 
[ ]2hrep2filt2_T_F3_QV.qual2017-09-27 13:22 1.1G 
[ ]2hrep2filt2_U_F3.csfasta2017-09-27 13:22 30M 
[ ]2hrep2filt2_U_F3_QV.qual2017-09-27 13:22 68M 
[TXT]2hrep2filt2b_QV_analysis.txt2017-10-18 20:00 22K 
[ ]2hrep2filt2b_T_F3.csfasta2017-10-18 20:00 467M 
[ ]2hrep2filt2b_T_F3.csfasta.coll2017-10-18 20:47 422M 
[ ]2hrep2filt2b_T_F3_QV.qual2017-10-18 20:00 1.1G 
[ ]2hrep2filt2b_U_F3.csfasta2017-10-18 20:00 30M 
[ ]2hrep2filt2b_U_F3_QV.qual2017-10-18 20:00 68M 
[TXT]2hrep2filt7_QV_analysis.txt2017-10-04 13:44 21K 
[ ]2hrep2filt7_T_F3.csfasta2017-10-04 13:44 151M 
[ ]2hrep2filt7_T_F3.csfasta.coll2017-10-04 13:57 136M 
[ ]2hrep2filt7_T_F3_QV.qual2017-10-04 13:44 359M 
[ ]2hrep2filt7_U_F3.csfasta2017-10-04 13:44 346M 
[ ]2hrep2filt7_U_F3_QV.qual2017-10-04 13:44 817M 
[ ]2hrep3-4p.bowtie2017-09-26 05:46 1.2G 
[ ]2hrep3-4p.bowtie_stats2017-09-26 05:46 7.7K 
[ ]2hrep3-4p.manymaps2017-09-26 05:46 3.9M 
[ ]2hrep3-Cexons-k-v3.bam2017-10-31 13:24 84K 
[ ]2hrep3-Cexons-k-v3.bowtie2017-10-30 19:12 2.3G 
[ ]2hrep3-Cexons-k-v3.bowtie_stats2017-10-30 19:11 8.0K 
[ ]2hrep3-Cexons-k-v3.manymaps2017-10-30 19:11 32M 
[ ]2hrep3-cutad-k-v3.bowtie2017-10-28 04:26 1.2G 
[ ]2hrep3-cutad-k-v3.bowtie_stats2017-10-28 04:26 8.8K 
[ ]2hrep3-cutad-k-v3.manymaps2017-10-28 04:26 4.6M 
[ ]2hrep3-cutad.fastq.fa2017-10-27 16:35 515M 
[ ]2hrep3-cutad.fastq.fa.coll2017-10-27 16:36 465M 
[ ]2hrep3-k-m50.bowtie2017-10-25 21:14 1.7G 
[ ]2hrep3-k-m50.bowtie_stats2017-10-25 21:14 8.3K 
[ ]2hrep3-k-m50.manymaps2017-10-25 21:14 119K 
[ ]2hrep3-k-v3-m50.bowtie2017-10-26 02:21 1.7G 
[ ]2hrep3-k-v3-m50.bowtie_stats2017-10-26 02:20 8.3K 
[ ]2hrep3-k-v3-m50.manymaps2017-10-26 02:20 287K 
[ ]2hrep3-k-v3.bowtie2017-10-26 23:00 1.5G 
[ ]2hrep3-k-v3.bowtie_stats2017-10-26 23:00 8.8K 
[ ]2hrep3-k-v3.manymaps2017-10-26 23:00 8.7M 
[ ]2hrep3-q20-m15.fa2018-10-24 18:19 396M 
[ ]2hrep3-q20-m15.fastq2018-10-12 16:36 673M 
[ ]2hrep3-q20-m15.log2018-10-12 16:36 2.0K 
[ ]2hrep3F-4p.bowtie2017-09-28 06:46 1.2G 
[ ]2hrep3F-4p.bowtie_stats2017-09-28 06:46 7.7K 
[ ]2hrep3F-4p.manymaps2017-09-28 06:46 3.9M 
[ ]2hrep3F-4p.sam2017-09-28 15:18 936M 
[ ]2hrep3F-4p3.bowtie2017-09-29 11:04 1.3G 
[ ]2hrep3F-4p3.bowtie_stats2017-09-29 11:04 8.3K 
[ ]2hrep3F-4p3.manymaps2017-09-29 11:04 6.9M 
[ ]2hrep3F-4p3.sam2017-09-29 11:50 962M 
[ ]2hrep3F-4p3.sam.bam2017-10-05 15:50 112M 
[ ]2hrep3F-4p3.sam.bam.bai2017-10-05 15:50 4.8M 
[ ]2hrep3F-4p3.sam.bam.conversion.stats2017-10-05 15:53 252  
[ ]2hrep3F-4p10.bowtie2017-10-04 16:27 268M 
[ ]2hrep3F-4p10.bowtie_stats2017-10-04 16:27 8.1K 
[ ]2hrep3F-4p10.manymaps2017-10-04 16:27 1.1M 
[ ]2hrep3F-4p10.sam2017-10-04 19:38 215M 
[ ]2hrep3F-4p10.sam.bam2017-10-05 14:45 18M 
[ ]2hrep3F-4p10.sam.bam.bai2017-10-05 14:45 3.9M 
[ ]2hrep3F-4p10.sam.bam.conversion.stats2017-10-05 14:48 240  
[TXT]2hrep3filt2_QV_analysis.txt2017-09-27 13:39 22K 
[ ]2hrep3filt2_T_F3.csfasta2017-09-27 13:39 619M 
[ ]2hrep3filt2_T_F3.csfasta.coll2017-09-28 19:45 560M 
[ ]2hrep3filt2_T_F3_QV.qual2017-09-27 13:39 1.4G 
[ ]2hrep3filt2_U_F3.csfasta2017-09-27 13:39 13M 
[ ]2hrep3filt2_U_F3_QV.qual2017-09-27 13:39 29M 
[TXT]2hrep3filt2b_QV_analysis.txt2017-10-18 20:17 22K 
[ ]2hrep3filt2b_T_F3.csfasta2017-10-18 20:17 619M 
[ ]2hrep3filt2b_T_F3.csfasta.coll2017-10-18 20:47 560M 
[ ]2hrep3filt2b_T_F3_QV.qual2017-10-18 20:17 1.4G 
[ ]2hrep3filt2b_U_F3.csfasta2017-10-18 20:17 13M 
[ ]2hrep3filt2b_U_F3_QV.qual2017-10-18 20:17 29M 
[TXT]2hrep3filt7_QV_analysis.txt2017-10-04 13:56 21K 
[ ]2hrep3filt7_T_F3.csfasta2017-10-04 13:56 139M 
[ ]2hrep3filt7_T_F3.csfasta.coll2017-10-04 13:57 125M 
[ ]2hrep3filt7_T_F3_QV.qual2017-10-04 13:56 333M 
[ ]2hrep3filt7_U_F3.csfasta2017-10-04 13:56 493M 
[ ]2hrep3filt7_U_F3_QV.qual2017-10-04 13:56 1.1G 
[TXT]4p10-conversion-stats.txt2017-10-05 15:27 3.0K 
[ ]6hrep1-4p.bowtie2017-09-26 08:59 1.9G 
[ ]6hrep1-4p.bowtie_stats2017-09-26 08:59 8.0K 
[ ]6hrep1-4p.manymaps2017-09-26 08:59 4.2M 
[ ]6hrep1-cutad-k-v3.bowtie2017-10-28 09:45 1.9G 
[ ]6hrep1-cutad-k-v3.bowtie_stats2017-10-28 09:45 9.0K 
[ ]6hrep1-cutad-k-v3.manymaps2017-10-28 09:45 11M 
[ ]6hrep1-cutad.fastq.fa2017-10-27 16:36 859M 
[ ]6hrep1-cutad.fastq.fa.coll2017-10-27 16:37 779M 
[ ]6hrep1-q20-m15.fa2018-10-24 18:19 665M 
[ ]6hrep1-q20-m15.fastq2018-10-12 16:42 1.1G 
[ ]6hrep1-q20-m15.log2018-10-12 16:42 2.1K 
[ ]6hrep1F-4p.bowtie2017-09-27 23:38 1.9G 
[ ]6hrep1F-4p.bowtie_stats2017-09-27 23:38 8.0K 
[ ]6hrep1F-4p.manymaps2017-09-27 23:38 4.1M 
[ ]6hrep1F-4p.sam2017-09-28 15:21 1.5G 
[ ]6hrep1F-4p3.bowtie2017-09-29 07:06 2.2G 
[ ]6hrep1F-4p3.bowtie_stats2017-09-29 07:06 8.6K 
[ ]6hrep1F-4p3.manymaps2017-09-29 07:06 11M 
[ ]6hrep1F-4p3.sam2017-09-29 11:55 1.6G 
[ ]6hrep1F-4p3.sam.bam2017-10-05 15:55 169M 
[ ]6hrep1F-4p3.sam.bam.bai2017-10-05 15:55 4.8M 
[ ]6hrep1F-4p3.sam.bam.conversion.stats2017-10-05 15:58 258  
[ ]6hrep1F-4p10.bowtie2017-10-04 18:51 510M 
[ ]6hrep1F-4p10.bowtie_stats2017-10-04 18:51 8.4K 
[ ]6hrep1F-4p10.manymaps2017-10-04 18:51 2.1M 
[ ]6hrep1F-4p10.sam2017-10-04 19:39 393M 
[ ]6hrep1F-4p10.sam.bam2017-10-05 14:48 27M 
[ ]6hrep1F-4p10.sam.bam.bai2017-10-05 14:48 3.8M 
[ ]6hrep1F-4p10.sam.bam.conversion.stats2017-10-05 14:51 246  
[TXT]6hrep1filt2_QV_analysis.txt2017-09-27 14:09 22K 
[ ]6hrep1filt2_T_F3.csfasta2017-09-27 14:09 1.1G 
[ ]6hrep1filt2_T_F3.csfasta.coll2017-09-28 19:46 1.0G 
[ ]6hrep1filt2_T_F3_QV.qual2017-09-27 14:09 2.5G 
[ ]6hrep1filt2_U_F3.csfasta2017-09-27 14:09 16M 
[ ]6hrep1filt2_U_F3_QV.qual2017-09-27 14:09 37M 
[TXT]6hrep1filt2b_QV_analysis.txt2017-10-18 19:25 22K 
[ ]6hrep1filt2b_T_F3.csfasta2017-10-18 19:25 1.1G 
[ ]6hrep1filt2b_T_F3.csfasta.coll2017-10-18 20:48 1.0G 
[ ]6hrep1filt2b_T_F3_QV.qual2017-10-18 19:25 2.5G 
[ ]6hrep1filt2b_U_F3.csfasta2017-10-18 19:25 16M 
[ ]6hrep1filt2b_U_F3_QV.qual2017-10-18 19:25 37M 
[TXT]6hrep1filt7_QV_analysis.txt2017-10-04 13:10 21K 
[ ]6hrep1filt7_T_F3.csfasta2017-10-04 13:10 253M 
[ ]6hrep1filt7_T_F3.csfasta.coll2017-10-04 13:57 228M 
[ ]6hrep1filt7_T_F3_QV.qual2017-10-04 13:10 606M 
[ ]6hrep1filt7_U_F3.csfasta2017-10-04 13:10 848M 
[ ]6hrep1filt7_U_F3_QV.qual2017-10-04 13:10 2.0G 
[ ]6hrep2-4p.bowtie2017-09-26 11:35 1.4G 
[ ]6hrep2-4p.bowtie_stats2017-09-26 11:35 7.9K 
[ ]6hrep2-4p.manymaps2017-09-26 11:35 2.9M 
[ ]6hrep2-cutad-k-v3.bowtie2017-10-28 13:09 1.6G 
[ ]6hrep2-cutad-k-v3.bowtie_stats2017-10-28 13:09 8.9K 
[ ]6hrep2-cutad-k-v3.manymaps2017-10-28 13:09 6.9M 
[ ]6hrep2-cutad.fastq.fa2017-10-27 16:37 697M 
[ ]6hrep2-cutad.fastq.fa.coll2017-10-27 16:38 630M 
[ ]6hrep2-q20-m15.fa2018-10-24 18:20 531M 
[ ]6hrep2-q20-m15.fastq2018-10-12 16:47 903M 
[ ]6hrep2-q20-m15.log2018-10-12 16:47 2.1K 
[ ]6hrep2F-4p.bowtie2017-09-28 02:34 1.4G 
[ ]6hrep2F-4p.bowtie_stats2017-09-28 02:34 7.9K 
[ ]6hrep2F-4p.manymaps2017-09-28 02:34 2.8M 
[ ]6hrep2F-4p.sam2017-09-28 15:24 1.2G 
[ ]6hrep2F-4p3.bowtie2017-09-29 10:04 1.5G 
[ ]6hrep2F-4p3.bowtie_stats2017-09-29 10:04 8.5K 
[ ]6hrep2F-4p3.manymaps2017-09-29 10:04 6.7M 
[ ]6hrep2F-4p3.sam2017-09-29 11:58 1.2G 
[ ]6hrep2F-4p3.sam.bam2017-10-05 16:00 151M 
[ ]6hrep2F-4p3.sam.bam.bai2017-10-05 16:00 4.9M 
[ ]6hrep2F-4p3.sam.bam.conversion.stats2017-10-05 16:03 251  
[ ]6hrep2F-4p10.bowtie2017-10-04 19:19 265M 
[ ]6hrep2F-4p10.bowtie_stats2017-10-04 19:19 8.2K 
[ ]6hrep2F-4p10.manymaps2017-10-04 19:19 849K 
[ ]6hrep2F-4p10.sam2017-10-04 19:40 238M 
[ ]6hrep2F-4p10.sam.bam2017-10-05 14:51 20M 
[ ]6hrep2F-4p10.sam.bam.bai2017-10-05 14:51 4.1M 
[ ]6hrep2F-4p10.sam.bam.conversion.stats2017-10-05 14:54 239  
[TXT]6hrep2filt2_QV_analysis.txt2017-09-27 14:32 22K 
[ ]6hrep2filt2_T_F3.csfasta2017-09-27 14:32 795M 
[ ]6hrep2filt2_T_F3.csfasta.coll2017-09-28 19:48 721M 
[ ]6hrep2filt2_T_F3_QV.qual2017-09-27 14:32 1.9G 
[ ]6hrep2filt2_U_F3.csfasta2017-09-27 14:32 30M 
[ ]6hrep2filt2_U_F3_QV.qual2017-09-27 14:32 69M 
[TXT]6hrep2filt2b_QV_analysis.txt2017-10-18 19:47 22K 
[ ]6hrep2filt2b_T_F3.csfasta2017-10-18 19:47 795M 
[ ]6hrep2filt2b_T_F3.csfasta.coll2017-10-18 20:49 721M 
[ ]6hrep2filt2b_T_F3_QV.qual2017-10-18 19:47 1.9G 
[ ]6hrep2filt2b_U_F3.csfasta2017-10-18 19:47 30M 
[ ]6hrep2filt2b_U_F3_QV.qual2017-10-18 19:47 69M 
[TXT]6hrep2filt7_QV_analysis.txt2017-10-04 13:26 21K 
[ ]6hrep2filt7_T_F3.csfasta2017-10-04 13:26 155M 
[ ]6hrep2filt7_T_F3.csfasta.coll2017-10-04 13:58 139M 
[ ]6hrep2filt7_T_F3_QV.qual2017-10-04 13:26 370M 
[ ]6hrep2filt7_U_F3.csfasta2017-10-04 13:26 670M 
[ ]6hrep2filt7_U_F3_QV.qual2017-10-04 13:26 1.6G 
[ ]6hrep3-4p.bowtie2017-09-26 12:50 705M 
[ ]6hrep3-4p.bowtie_stats2017-09-26 12:50 7.8K 
[ ]6hrep3-4p.manymaps2017-09-26 12:50 1.3M 
[ ]6hrep3-cutad-k-v3.bowtie2017-10-28 14:44 822M 
[ ]6hrep3-cutad-k-v3.bowtie_stats2017-10-28 14:44 8.8K 
[ ]6hrep3-cutad-k-v3.manymaps2017-10-28 14:44 6.6M 
[ ]6hrep3-cutad.fastq.fa2017-10-27 16:38 340M 
[ ]6hrep3-cutad.fastq.fa.coll2017-10-27 16:38 307M 
[ ]6hrep3-q20-m15.fa2018-10-24 18:20 249M 
[ ]6hrep3-q20-m15.fastq2018-10-12 16:49 423M 
[ ]6hrep3-q20-m15.log2018-10-12 16:49 2.0K 
[ ]6hrep3F-4p.bowtie2017-09-28 04:01 685M 
[ ]6hrep3F-4p.bowtie_stats2017-09-28 04:01 7.8K 
[ ]6hrep3F-4p.manymaps2017-09-28 04:01 1.3M 
[ ]6hrep3F-4p.sam2017-09-28 15:25 577M 
[ ]6hrep3F-4p3.bowtie2017-09-29 11:24 832M 
[ ]6hrep3F-4p3.bowtie_stats2017-09-29 11:24 8.3K 
[ ]6hrep3F-4p3.manymaps2017-09-29 11:24 3.3M 
[ ]6hrep3F-4p3.sam2017-09-29 12:00 618M 
[ ]6hrep3F-4p3.sam.bam2017-10-05 16:03 74M 
[ ]6hrep3F-4p3.sam.bam.bai2017-10-05 16:03 4.8M 
[ ]6hrep3F-4p3.sam.bam.conversion.stats2017-10-05 16:06 250  
[ ]6hrep3F-4p10.bowtie2017-10-04 19:36 174M 
[ ]6hrep3F-4p10.bowtie_stats2017-10-04 19:36 7.9K 
[ ]6hrep3F-4p10.manymaps2017-10-04 19:36 411K 
[ ]6hrep3F-4p10.sam2017-10-04 19:40 141M 
[ ]6hrep3F-4p10.sam.bam2017-10-05 14:54 11M 
[ ]6hrep3F-4p10.sam.bam.bai2017-10-05 14:54 3.0M 
[ ]6hrep3F-4p10.sam.bam.conversion.stats2017-10-05 14:57 238  
[TXT]6hrep3filt2_QV_analysis.txt2017-09-27 14:45 21K 
[ ]6hrep3filt2_T_F3.csfasta2017-09-27 14:45 397M 
[ ]6hrep3filt2_T_F3.csfasta.coll2017-09-28 19:48 358M 
[ ]6hrep3filt2_T_F3_QV.qual2017-09-27 14:45 946M 
[ ]6hrep3filt2_U_F3.csfasta2017-09-27 14:45 12M 
[ ]6hrep3filt2_U_F3_QV.qual2017-09-27 14:45 28M 
[TXT]6hrep3filt2b_QV_analysis.txt2017-10-18 19:58 21K 
[ ]6hrep3filt2b_T_F3.csfasta2017-10-18 19:58 397M 
[ ]6hrep3filt2b_T_F3.csfasta.coll2017-10-18 20:50 358M 
[ ]6hrep3filt2b_T_F3_QV.qual2017-10-18 19:58 946M 
[ ]6hrep3filt2b_U_F3.csfasta2017-10-18 19:58 12M 
[ ]6hrep3filt2b_U_F3_QV.qual2017-10-18 19:58 28M 
[TXT]6hrep3filt7_QV_analysis.txt2017-10-04 13:34 20K 
[ ]6hrep3filt7_T_F3.csfasta2017-10-04 13:34 91M 
[ ]6hrep3filt7_T_F3.csfasta.coll2017-10-04 13:58 82M 
[ ]6hrep3filt7_T_F3_QV.qual2017-10-04 13:34 218M 
[ ]6hrep3filt7_U_F3.csfasta2017-10-04 13:34 318M 
[ ]6hrep3filt7_U_F3_QV.qual2017-10-04 13:34 757M 
[ ]IFN-4p.bowtie2017-09-26 17:00 713M 
[ ]IFN-4p.bowtie_stats2017-09-26 17:00 8.1K 
[ ]IFN-4p.manymaps2017-09-26 17:00 1.6M 
[ ]IFN-cutad-k-v3.bowtie2017-10-28 05:58 7.1M 
[ ]IFN-cutad-k-v3.bowtie_stats2017-10-28 05:58 2.6K 
[ ]IFN-cutad-k-v3.manymaps2017-10-28 05:58 391K 
[ ]IFN-cutad.fastq.fa2017-10-27 16:38 317M 
[ ]IFN-cutad.fastq.fa.coll2017-10-27 16:38 286M 
[ ]IFN-q20-m15.fa2018-10-24 18:20 238M 
[ ]IFN-q20-m15.fastq2018-10-12 16:52 404M 
[ ]IFN-q20-m15.log2018-10-12 16:52 2.0K 
[ ]IFNF-4p.bowtie2017-09-28 08:15 687M 
[ ]IFNF-4p.bowtie_stats2017-09-28 08:15 8.1K 
[ ]IFNF-4p.manymaps2017-09-28 08:15 1.5M 
[ ]IFNF-4p.sam2017-09-28 15:27 554M 
[ ]IFNF-4p3.bowtie2017-09-29 03:07 733M 
[ ]IFNF-4p3.bowtie_stats2017-09-29 03:07 8.6K 
[ ]IFNF-4p3.manymaps2017-09-29 03:07 3.6M 
[ ]IFNF-4p3.sam2017-09-29 11:37 562M 
[ ]IFNF-4p3.sam.bam2017-10-05 16:07 79M 
[ ]IFNF-4p3.sam.bam.bai2017-10-05 16:07 4.8M 
[ ]IFNF-4p3.sam.bam.conversion.stats2017-10-05 16:10 248  
[ ]IFNF-4p10.bowtie2017-10-04 18:05 174M 
[ ]IFNF-4p10.bowtie_stats2017-10-04 18:05 8.4K 
[ ]IFNF-4p10.manymaps2017-10-04 18:05 617K 
[ ]IFNF-4p10.sam2017-10-04 19:41 138M 
[ ]IFNF-4p10.sam.bam2017-10-05 14:57 13M 
[ ]IFNF-4p10.sam.bam.bai2017-10-05 14:57 3.8M 
[ ]IFNF-4p10.sam.bam.conversion.stats2017-10-05 14:59 237  
[TXT]IFNfilt2_QV_analysis.txt2017-09-27 15:27 21K 
[ ]IFNfilt2_T_F3.csfasta2017-09-27 15:27 362M 
[ ]IFNfilt2_T_F3.csfasta.coll2017-09-28 19:49 327M 
[ ]IFNfilt2_T_F3_QV.qual2017-09-27 15:27 863M 
[ ]IFNfilt2_U_F3.csfasta2017-09-27 15:27 16M 
[ ]IFNfilt2_U_F3_QV.qual2017-09-27 15:27 36M 
[TXT]IFNfilt2b_QV_analysis.txt2017-10-18 20:43 21K 
[ ]IFNfilt2b_T_F3.csfasta2017-10-18 20:43 362M 
[ ]IFNfilt2b_T_F3.csfasta.coll2017-10-18 20:50 327M 
[ ]IFNfilt2b_T_F3_QV.qual2017-10-18 20:43 863M 
[ ]IFNfilt2b_U_F3.csfasta2017-10-18 20:43 16M 
[ ]IFNfilt2b_U_F3_QV.qual2017-10-18 20:43 36M 
[TXT]IFNfilt7_QV_analysis.txt2017-10-04 13:59 20K 
[ ]IFNfilt7_T_F3.csfasta2017-10-04 13:59 99M 
[ ]IFNfilt7_T_F3.csfasta.coll2017-10-04 13:58 79M 
[ ]IFNfilt7_T_F3_QV.qual2017-10-04 13:59 237M 
[ ]IFNfilt7_U_F3.csfasta2017-10-04 13:59 278M 
[ ]IFNfilt7_U_F3_QV.qual2017-10-04 13:59 662M 
[ ]IGG-4p.bowtie2017-09-25 15:48 632M 
[ ]IGG-4p.bowtie_stats2017-09-25 15:48 7.6K 
[ ]IGG-4p.manymaps2017-09-25 15:48 1.0M 
[ ]IGG-cutad-k-v3.bowtie2017-10-28 05:48 698M 
[ ]IGG-cutad-k-v3.bowtie_stats2017-10-28 05:48 8.8K 
[ ]IGG-cutad-k-v3.manymaps2017-10-28 05:48 3.5M 
[ ]IGG-cutad.fastq.fa2017-10-27 16:38 288M 
[ ]IGG-cutad.fastq.fa.coll2017-10-27 16:39 260M 
[ ]IGG-q20-m15.fa2018-10-15 16:53 222M 
[ ]IGG-q20-m15.fastq2018-10-12 16:54 378M 
[ ]IGG-q20-m15.log2018-10-12 16:54 2.0K 
[ ]IGG.bowtie2017-09-24 18:36 1.0G 
[ ]IGG.bowtie_stats2017-09-24 18:36 8.0K 
[ ]IGG.manymaps2017-09-24 18:36 4.2M 
[ ]IGGF-4p.bowtie2017-09-27 21:18 617M 
[ ]IGGF-4p.bowtie_stats2017-09-27 21:18 7.6K 
[ ]IGGF-4p.manymaps2017-09-27 21:18 1.0M 
[ ]IGGF-4p.sam2017-09-28 13:35 530M 
[ ]IGGF-4p3.bowtie2017-09-28 21:45 709M 
[ ]IGGF-4p3.bowtie_stats2017-09-28 21:45 8.2K 
[ ]IGGF-4p3.manymaps2017-09-28 21:45 4.8M 
[ ]IGGF-4p3.sam2017-09-29 11:35 554M 
[ ]IGGF-4p3.sam.bam2017-10-05 16:10 65M 
[ ]IGGF-4p3.sam.bam.bai2017-10-05 16:10 4.8M 
[ ]IGGF-4p3.sam.bam.conversion.stats2017-10-05 16:13 250  
[ ]IGGF-4p10.bowtie2017-10-04 14:17 191M 
[ ]IGGF-4p10.bowtie_stats2017-10-04 14:17 7.7K 
[ ]IGGF-4p10.manymaps2017-10-04 14:17 2.3M 
[ ]IGGF-4p10.sam2017-10-04 19:40 156M 
[ ]IGGF-4p10.sam.bam2017-10-05 14:59 11M 
[ ]IGGF-4p10.sam.bam.bai2017-10-05 14:59 3.0M 
[ ]IGGF-4p10.sam.bam.conversion.stats2017-10-05 15:02 240  
[TXT]IGGfilt2_QV_analysis.txt2017-09-27 12:17 21K 
[ ]IGGfilt2_T_F3.csfasta2017-09-27 12:17 360M 
[ ]IGGfilt2_T_F3.csfasta.coll2017-09-28 19:49 325M 
[ ]IGGfilt2_T_F3_QV.qual2017-09-27 12:17 859M 
[ ]IGGfilt2_U_F3.csfasta2017-09-27 12:17 9.9M 
[ ]IGGfilt2_U_F3_QV.qual2017-09-27 12:17 23M 
[TXT]IGGfilt2b_QV_analysis.txt2017-10-18 20:08 21K 
[ ]IGGfilt2b_T_F3.csfasta2017-10-18 20:08 360M 
[ ]IGGfilt2b_T_F3.csfasta.coll2017-10-18 20:50 325M 
[ ]IGGfilt2b_T_F3_QV.qual2017-10-18 20:08 859M 
[ ]IGGfilt2b_U_F3.csfasta2017-10-18 20:08 9.9M 
[ ]IGGfilt2b_U_F3_QV.qual2017-10-18 20:08 23M 
[TXT]IGGfilt7_QV_analysis.txt2017-10-04 12:56 20K 
[ ]IGGfilt7_T_F3.csfasta2017-10-04 12:56 103M 
[ ]IGGfilt7_T_F3.csfasta.coll2017-10-04 13:58 92M 
[ ]IGGfilt7_T_F3_QV.qual2017-10-04 12:56 246M 
[ ]IGGfilt7_U_F3.csfasta2017-10-04 12:56 267M 
[ ]IGGfilt7_U_F3_QV.qual2017-10-04 12:56 635M 
[ ]IL4-3UTR-cutad-k-v3.bowtie2017-10-30 19:00 2.9G 
[ ]IL4-3UTR-cutad-k-v3.bowtie_stats2017-10-30 19:00 9.0K 
[ ]IL4-3UTR-cutad-k-v3.manymaps2017-10-30 19:00 29M 
[ ]IL4-4p.bowtie2017-09-26 15:45 1.5G 
[ ]IL4-4p.bowtie_stats2017-09-26 15:45 8.1K 
[ ]IL4-4p.manymaps2017-09-26 15:45 2.9M 
[ ]IL4-Cexons-cutad-k-v3.bowtie2017-10-30 20:19 2.7G 
[ ]IL4-Cexons-cutad-k-v3.bowtie_stats2017-10-30 20:19 9.0K 
[ ]IL4-Cexons-cutad-k-v3.manymaps2017-10-30 20:19 33M 
[ ]IL4-cutad-k-M.bowtie2017-10-25 19:16 1.9G 
[ ]IL4-cutad-k-M.bowtie_stats2017-10-25 19:16 8.9K 
[ ]IL4-cutad-k-M.manymaps2017-10-25 19:16 14M 
[ ]IL4-cutad-k-Mstrata.bowtie2017-10-25 19:25 1.9G 
[ ]IL4-cutad-k-Mstrata.bowtie_stats2017-10-25 19:25 8.9K 
[ ]IL4-cutad-k-Mstrata.manymaps2017-10-25 19:25 14M 
[ ]IL4-cutad-k-v3.bowtie2017-10-30 17:03 1.8G 
[ ]IL4-cutad-k-v3.bowtie_stats2017-10-30 17:03 9.0K 
[ ]IL4-cutad-k-v3.manymaps2017-10-30 17:03 9.4M 
[ ]IL4-cutad-k.bowtie2017-10-25 17:20 1.9G 
[ ]IL4-cutad-k.bowtie_stats2017-10-25 17:20 9.0K 
[ ]IL4-cutad-k.manymaps2017-10-25 17:20 14M 
[ ]IL4-cutad.fastq.fa2017-10-30 13:23 766M 
[ ]IL4-cutad.fastq.fa.coll2017-10-30 13:23 694M 
[ ]IL4-k-M50.bowtie_stats2017-10-25 19:29 766  
[ ]IL4-k-l15-m30.bowtie2017-10-26 17:57 2.4G 
[ ]IL4-k-l15-m30.bowtie_stats2017-10-26 17:56 9.4K 
[ ]IL4-k-l15-m30.manymaps2017-10-26 17:56 778K 
[ ]IL4-k-l15.bowtie_stats2017-10-26 16:28 2.1K 
[ ]IL4-k-m20.bowtie2017-10-26 19:26 2.4G 
[ ]IL4-k-m20.bowtie_stats2017-10-26 19:26 8.7K 
[ ]IL4-k-m20.manymaps2017-10-26 19:26 1.7M 
[ ]IL4-k-m50.bowtie2017-10-25 21:55 2.4G 
[ ]IL4-k-m50.bowtie_stats2017-10-25 21:55 8.5K 
[ ]IL4-k-m50.manymaps2017-10-25 21:55 203K 
[ ]IL4-k-v3-m50.bowtie2017-10-26 01:41 2.4G 
[ ]IL4-k-v3-m50.bowtie_stats2017-10-26 01:41 8.6K 
[ ]IL4-k-v3-m50.manymaps2017-10-26 01:41 358K 
[ ]IL4-k-v3.bam2017-10-31 13:46 248M 
[ ]IL4-k-v3.bowtie2017-10-25 22:42 2.2G 
[ ]IL4-k-v3.bowtie_stats2017-10-25 22:42 8.9K 
[ ]IL4-k-v3.manymaps2017-10-25 22:42 10M 
[ ]IL4-k.bowtie2017-10-25 02:55 2.2G 
[ ]IL4-k.bowtie_stats2017-10-25 02:55 8.9K 
[ ]IL4-k.manymaps2017-10-25 02:55 15M 
[ ]IL4-q10-m15-15mMm1kIntron-bam.log2018-10-11 20:39 114  
[ ]IL4-q10-m15-15mMm1kIntron.bam2018-10-11 20:57 4.9G 
[ ]IL4-q10-m15-15mMm1kIntron.bam.md.bam2018-10-12 13:26 5.1G 
[ ]IL4-q10-m15-15mMm1kIntron.bam.md.bt2018-10-12 13:52 13G 
[ ]IL4-q10-m15.fa2018-10-10 18:31 756M 
[ ]IL4-q10-m15.fastq2018-10-10 14:38 1.3G 
[ ]IL4-q10-m15.log2018-10-10 14:38 2.0K 
[ ]IL4-q20-m15.fa2018-10-10 19:57 592M 
[ ]IL4-q20-m15.fastq2018-10-10 18:31 1.0G 
[ ]IL4-q20-m15.log2018-10-10 18:31 2.0K 
[ ]IL4-q25-m15.fa2018-10-11 15:48 258M 
[ ]IL4-q25-m15.fastq2018-10-11 15:06 431M 
[ ]IL4-q25-m15.log2018-10-11 15:06 2.1K 
[ ]IL4-q30-m15.fastq2018-10-11 14:58 36M 
[ ]IL4-q30-m15.log2018-10-11 14:58 1.9K 
[ ]IL4F-4p.bowtie2017-09-28 07:06 1.4G 
[ ]IL4F-4p.bowtie_stats2017-09-28 07:06 8.1K 
[ ]IL4F-4p.manymaps2017-09-28 07:06 2.7M 
[ ]IL4F-4p.sam2017-09-28 15:29 1.2G 
[ ]IL4F-4p3.bowtie2017-09-29 01:33 1.7G 
[ ]IL4F-4p3.bowtie_stats2017-09-29 01:33 8.6K 
[ ]IL4F-4p3.manymaps2017-09-29 01:33 12M 
[ ]IL4F-4p3.sam2017-09-29 11:41 1.3G 
[ ]IL4F-4p3.sam.bam2017-10-05 16:15 163M 
[ ]IL4F-4p3.sam.bam.bai2017-10-05 16:15 4.9M 
[ ]IL4F-4p3.sam.bam.conversion.stats2017-10-05 16:18 252  
[ ]IL4F-4p10.bowtie2017-10-04 17:49 358M 
[ ]IL4F-4p10.bowtie_stats2017-10-04 17:49 8.5K 
[ ]IL4F-4p10.manymaps2017-10-04 17:49 1.7M 
[ ]IL4F-4p10.sam2017-10-04 19:41 267M 
[ ]IL4F-4p10.sam.bam2017-10-05 15:02 24M 
[ ]IL4F-4p10.sam.bam.bai2017-10-05 15:02 4.4M 
[ ]IL4F-4p10.sam.bam.conversion.stats2017-10-05 15:05 239  
[TXT]IL4filt2_QV_analysis.txt2017-09-27 15:14 22K 
[ ]IL4filt2_T_F3.csfasta2017-09-27 15:14 836M 
[ ]IL4filt2_T_F3.csfasta.coll2017-09-28 19:50 759M 
[ ]IL4filt2_T_F3_QV.qual2017-09-27 15:14 1.9G 
[ ]IL4filt2_U_F3.csfasta2017-09-27 15:14 48M 
[ ]IL4filt2_U_F3_QV.qual2017-09-27 15:14 111M 
[TXT]IL4filt2b_QV_analysis.txt2017-10-18 20:33 22K 
[ ]IL4filt2b_T_F3.csfasta2017-10-18 20:33 836M 
[ ]IL4filt2b_T_F3.csfasta.coll2017-10-18 20:51 759M 
[ ]IL4filt2b_T_F3_QV.qual2017-10-18 20:33 1.9G 
[ ]IL4filt2b_U_F3.csfasta2017-10-18 20:33 48M 
[ ]IL4filt2b_U_F3_QV.qual2017-10-18 20:33 111M 
[TXT]IL4filt7_QV_analysis.txt2017-10-04 13:51 21K 
[ ]IL4filt7_T_F3.csfasta2017-10-04 13:51 172M 
[ ]IL4filt7_T_F3.csfasta.coll2017-10-04 13:58 154M 
[ ]IL4filt7_T_F3_QV.qual2017-10-04 13:51 410M 
[ ]IL4filt7_U_F3.csfasta2017-10-04 13:51 712M 
[ ]IL4filt7_U_F3_QV.qual2017-10-04 13:51 1.7G 
[ ]QVanalysis2plot.r2017-10-03 15:34 244  
[TXT]README-bowtie-only-alignment.txt2017-10-03 19:47 3.6K 
[TXT]README-mismatch-stats.txt2018-10-16 14:00 20K 
[ ]SeqTrimMap2017-09-25 14:28 12K 
[ ]SeqTrimMap22017-09-22 17:09 11K 
[ ]SeqTrimMap32017-09-22 17:10 11K 
[ ]SeqTrimMap4Paralyzer2017-09-25 14:37 12K 
[ ]SeqTrimMap4Paralyzer22017-09-27 12:46 12K 
[ ]SeqTrimMap4ParalyzerFix2017-10-25 19:33 12K 
[ ]SeqTrimMap4ParalyzerM2017-10-25 17:12 12K 
[ ]SeqTrimMap4ParalyzerMstrata2017-10-25 17:20 12K 
[ ]TIA_ugc_604_10_Genome_old.bam2017-10-03 14:12 345M 
[ ]TIA_ugc_604_10_Genome_old.bam.bai2017-10-03 15:35 4.8M 
[ ]TIA_ugc_604_10_Genome_old.bam.conversion.stats2017-10-03 18:14 264  
[ ]cutadapt1.log2018-10-12 16:13 0  
[TXT]cutadapt1.sh2018-10-15 16:52 3.4K 
[ ]foo2017-10-03 18:36 2.9G 
[ ]foo.log2017-10-04 20:08 56K 
[ ]foo.plus2017-10-22 18:33 126M 
[TXT]foo.sh2017-10-04 17:16 2.3K 
[TXT]foo2.sh2017-10-04 17:25 442  
[ ]foo3.log2017-10-04 20:01 810  
[TXT]foo3.sh2017-10-04 17:59 423  
[TXT]get-conversion-rates.sh2017-10-05 14:31 511  
[TXT]mm-stats.txt2018-10-15 11:40 121K 
[DIR]new/2019-12-27 09:56 -  
[ ]parclip-pipeline-wavCluster1.r2017-10-03 16:31 3.5K 
[TXT]parclip-pipeline1.sh2017-09-28 19:40 12K 
[TXT]parclip-pipeline2.sh2017-10-03 12:42 13K 
[TXT]parclip-pipeline3.sh2017-10-18 17:07 29K 
[ ]parclip-pipeline4.log2017-10-28 14:44 104K 
[TXT]parclip-pipeline4.sh2017-10-27 15:54 4.2K 
[TXT]pipeline1.sh2017-09-27 12:06 3.7K 
[TXT]raw-files.txt2017-09-26 19:57 661  
[DIR]saet/2017-10-25 18:13 -  
[IMG]substPlot-0hrep1F-4p3.png2017-10-02 19:24 33K 
[IMG]substPlot-0hrep1F-4p4.png2017-10-03 16:32 26K 
[IMG]substPlot-0hrep2F-4p3.png2017-10-02 19:25 33K 
[IMG]substPlot-0hrep3F-4p3.png2017-10-02 19:27 27K 
[IMG]substPlot-2hrep1F-4p3.png2017-10-02 19:28 29K 
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[IMG]substPlot-2hrep3F-4p3.png2017-10-02 19:29 32K 
[IMG]substPlot-6hrep1F-4p3.png2017-10-02 19:29 27K 
[IMG]substPlot-6hrep2F-4p3.png2017-10-02 19:30 27K 
[IMG]substPlot-6hrep3F-4p3.png2017-10-02 19:30 29K 
[IMG]substPlot-IFNF-4p3.png2017-10-02 19:31 29K 
[IMG]substPlot-IGGF-4p3.png2017-10-02 19:32 33K 
[IMG]substPlot-IL4F-4p3.png2017-10-02 19:31 27K 
[IMG]substPlot-TIA_ugc_604_10_Genome_old.png2017-10-03 16:32 28K 
[DIR]t/2018-10-15 17:00 -  
[ ]test.bowtie2017-09-29 13:19 7.7K 
[ ]test.sam2017-09-29 13:19 11K 
[ ]ugc_604_2.md52013-11-27 11:25 188  
[ ]ugc_604_3.md52013-11-27 11:25 188  
[ ]ugc_604_4.md52013-11-27 11:25 188  
[ ]ugc_604_5.md52013-11-27 11:25 188  
[ ]ugc_604_6.md52013-11-27 11:25 188  
[ ]ugc_604_7.md52013-11-27 11:25 188  
[ ]ugc_604_8.md52013-11-27 11:25 188  
[ ]ugc_604_9.md52013-11-27 11:25 188  
[ ]ugc_604_10.md52013-11-27 11:25 194  
[ ]ugc_604_11.md52013-11-27 11:25 194  
[ ]ugc_604_12.md52013-11-27 11:25 194  
[DIR]wt0hrep1d/2017-11-03 16:11 -  
Apache/2.4.66 (Debian) Server at genomics-lab.fleming.gr Port 443