Index of /fleming/DKlab/mr/rnaseq

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]KO01_R1_trm.fastq.gz2018-09-26 18:55 2.8G 
[ ]KO01_R1_trm.log2018-09-26 18:55 6.2K 
[ ]KO01_R2_trm.fastq.gz2018-09-26 18:55 2.7G 
[ ]KO01_trm.bam2018-09-27 15:49 4.3G 
[ ]KO01_trm.bam.samp.bw2018-11-10 14:10 149M 
[ ]KO01_trm_k20.bam2019-07-10 21:42 4.7G 
[ ]KO02_R1_trm.fastq.gz2018-09-26 19:01 3.5G 
[ ]KO02_R1_trm.log2018-09-26 19:01 6.3K 
[ ]KO02_R2_trm.fastq.gz2018-09-26 19:01 3.4G 
[ ]KO02_trm.bam2018-09-27 16:15 5.3G 
[ ]KO02_trm.bam.samp.bw2018-11-10 14:37 143M 
[ ]KO02_trm_k20.bam2019-07-10 22:15 5.8G 
[ ]KO21_R1_trm.fastq.gz2018-09-26 19:14 3.3G 
[ ]KO21_R1_trm.log2018-09-26 19:14 6.3K 
[ ]KO21_R2_trm.fastq.gz2018-09-26 19:14 3.3G 
[ ]KO21_trm.bam2018-09-27 16:40 5.2G 
[ ]KO21_trm.bam.samp.bw2018-11-10 15:03 135M 
[ ]KO21_trm_k20.bam2019-07-10 22:46 5.7G 
[ ]KO22_R1_trm.fastq.gz2018-09-26 19:19 3.3G 
[ ]KO22_R1_trm.log2018-09-26 19:19 6.2K 
[ ]KO22_R2_trm.fastq.gz2018-09-26 19:19 3.3G 
[ ]KO22_trm.bam2018-09-27 17:04 5.1G 
[ ]KO22_trm.bam.samp.bw2018-11-10 15:30 135M 
[ ]KO22_trm_k20.bam2019-07-10 23:17 5.6G 
[ ]KO61_R1_trm.fastq.gz2018-09-26 19:33 3.2G 
[ ]KO61_R1_trm.log2018-09-26 19:33 6.3K 
[ ]KO61_R2_trm.fastq.gz2018-09-26 19:33 3.2G 
[ ]KO61_trm.bam2018-09-27 17:28 5.0G 
[ ]KO61_trm.bam.samp.bw2018-11-10 15:57 129M 
[ ]KO61_trm_k20.bam2019-07-10 23:47 5.6G 
[ ]KO62_R1_trm.fastq.gz2018-09-26 19:39 3.8G 
[ ]KO62_R1_trm.log2018-09-26 19:39 6.3K 
[ ]KO62_R2_trm.fastq.gz2018-09-26 19:39 3.8G 
[ ]KO62_trm.bam2018-09-27 17:55 6.0G 
[ ]KO62_trm.bam.samp.bw2018-11-10 16:24 132M 
[ ]KO62_trm_k20.bam2019-07-11 00:23 6.6G 
[ ]KOIFN_1_R1_trm.fastq.gz2018-09-26 20:14 3.6G 
[ ]KOIFN_1_R1_trm.log2018-09-26 20:14 6.1K 
[ ]KOIFN_1_R2_trm.fastq.gz2018-09-26 20:14 3.6G 
[ ]KOIFN_1_trm.bam2018-09-27 18:21 5.7G 
[ ]KOIFN_1_trm.bam.samp.bw2018-11-10 16:52 124M 
[ ]KOIFN_1_trm_k20.bam2019-07-11 00:57 6.3G 
[ ]KOIFN_2_R1_trm.fastq.gz2018-09-26 20:19 3.1G 
[ ]KOIFN_2_R1_trm.log2018-09-26 20:19 6.1K 
[ ]KOIFN_2_R2_trm.fastq.gz2018-09-26 20:19 3.1G 
[ ]KOIFN_2_trm.bam2018-09-27 18:44 5.0G 
[ ]KOIFN_2_trm.bam.samp.bw2018-11-10 17:17 125M 
[ ]KOIFN_2_trm_k20.bam2019-07-11 01:26 5.5G 
[ ]KOIL4_1_R1_trm.fastq.gz2018-09-26 19:59 3.6G 
[ ]KOIL4_1_R1_trm.log2018-09-26 19:59 6.3K 
[ ]KOIL4_1_R2_trm.fastq.gz2018-09-26 19:59 3.6G 
[ ]KOIL4_1_trm.bam2018-09-27 19:11 6.0G 
[ ]KOIL4_1_trm.bam.samp.bw2018-11-10 17:45 144M 
[ ]KOIL4_1_trm_k20.bam2019-07-11 02:00 6.6G 
[ ]KOIL4_2_R1_trm.fastq.gz2018-09-26 19:45 3.7G 
[ ]KOIL4_2_R1_trm.log2018-09-26 19:45 6.1K 
[ ]KOIL4_2_R2_trm.fastq.gz2018-09-26 19:45 3.8G 
[ ]KOIL4_2_trm.bam2018-09-27 19:39 6.2G 
[ ]KOIL4_2_trm.bam.samp.bw2018-11-10 18:12 144M 
[ ]KOIL4_2_trm_k20.bam2019-07-11 02:36 6.8G 
[TXT]Pgenomes.txt2018-07-12 19:27 36  
[TXT]README-edgeR.txt2018-02-25 16:01 563  
[TXT]README-processing.txt2018-09-27 14:32 20K 
[TXT]README-processing2.txt2018-10-16 14:02 22K 
[TXT]README-read-stats.txt2019-07-16 12:50 4.6K 
[TXT]README-tracks.txt2018-11-10 13:46 246  
[DIR]RNA_Seq/2017-06-01 13:29 -  
[TXT]SStrackDb.txt2018-11-10 09:43 8.0K 
[TXT]StrackDb.txt2018-11-10 22:21 3.6K 
[DIR]aswell/2018-05-25 18:26 -  
[TXT]cutadapt.sh2018-09-26 18:47 7.4K 
[DIR]deg/2020-04-28 17:51 -  
[DIR]diff_exp/2017-11-01 11:17 -  
[DIR]edger-per-gene/2018-03-19 14:32 -  
[DIR]edger2/2018-03-19 13:38 -  
[DIR]edger3/2018-03-19 13:07 -  
[DIR]fastq/2018-04-19 17:11 -  
[ ]featureCounts_k20.log2019-07-11 15:50 17K 
[TXT]genomes.txt2018-11-10 22:21 36  
[ ]get-multimap-stats-pe.awk2019-07-11 14:53 345  
[ ]get-multimap-stats.awk2019-07-10 16:38 257  
[DIR]hg19/2021-09-02 13:58 -  
[ ]hisat-k20.log2019-07-11 06:25 2.0M 
[TXT]hisat-k20.sh2019-07-10 20:51 4.6K 
[ ]hisat.log2018-09-27 15:20 664  
[ ]hisat.log22018-09-27 22:50 1.9M 
[TXT]hisat.sh2018-11-01 13:51 4.8K 
[TXT]hub-link.txt2018-11-10 22:21 125  
[TXT]hub.txt2018-11-10 22:21 121  
[TXT]make-stranded-sampled-mm9-tracks.sh2018-11-09 20:14 4.0K 
[TXT]make-unstranded-sampled-mm9-tracks.sh2018-11-10 13:45 4.0K 
[DIR]mm9/2021-09-02 13:58 -  
[ ]mm9_hisat2.1.ht22017-06-12 20:27 817M 
[ ]mm9_hisat2.2.ht22017-06-12 20:27 610M 
[ ]mm9_hisat2.3.ht22017-06-12 20:08 5.7K 
[ ]mm9_hisat2.4.ht22017-06-12 20:08 610M 
[ ]mm9_hisat2.5.ht22017-06-12 20:29 1.0G 
[ ]mm9_hisat2.6.ht22017-06-12 20:29 621M 
[ ]mm9_hisat2.7.ht22017-06-12 20:08 12  
[ ]mm9_hisat2.8.ht22017-06-12 20:08 8  
[DIR]mm10/2021-09-02 13:58 -  
[DIR]per-gene/2018-07-02 15:58 -  
[TXT]reads.txt2018-11-08 20:08 475  
[DIR]stringtie/2018-10-17 19:40 -  
[DIR]stringtie2/2019-07-11 19:11 -  
[TXT]trackDb.txt2018-11-09 12:13 8.5K 
[DIR]tracks/2018-09-25 17:50 -  
[ ]wt0h1.bam2017-06-13 11:50 4.1G 
[DIR]wt0h1/2018-09-26 15:45 -  
[DIR]wt0h1_v2/2018-09-26 18:23 -  
[ ]wt01_R1_trm.fastq.gz2018-09-25 19:00 2.5G 
[ ]wt01_R1_trm_1.fastq.gz2018-09-25 19:00 2.5G 
[ ]wt01_R2_trm.fastq.gz2018-09-25 19:00 2.5G 
[ ]wt01_R2_trm_2.fastq.gz2018-09-25 19:00 2.5G 
[ ]wt01_trm.bam2018-09-27 14:41 3.8G 
[ ]wt01_trm.bam.samp.bw2018-11-10 18:36 143M 
[ ]wt01_trm_k20.bam2019-07-10 21:16 4.2G 
[ ]wt02_R1_trm.fastq.gz2018-09-26 18:51 2.5G 
[ ]wt02_R1_trm.log2018-09-26 18:51 6.1K 
[ ]wt02_R2_trm.fastq.gz2018-09-26 18:51 2.5G 
[ ]wt02_trm.bam2018-09-27 19:59 3.9G 
[ ]wt02_trm.bam.samp.bw2018-11-10 19:01 141M 
[ ]wt02_trm_k20.bam2019-07-11 02:59 4.3G 
[ ]wt21_R1_trm.fastq.gz2018-09-26 19:04 2.3G 
[ ]wt21_R1_trm.log2018-09-26 19:04 6.1K 
[ ]wt21_R2_trm.fastq.gz2018-09-26 19:04 2.3G 
[ ]wt21_trm.bam2018-09-27 20:17 3.6G 
[ ]wt21_trm.bam.samp.bw2018-11-10 19:25 128M 
[ ]wt21_trm_k20.bam2019-07-11 03:21 4.0G 
[ ]wt22_R1_trm.fastq.gz2018-09-26 19:09 2.7G 
[ ]wt22_R1_trm.log2018-09-26 19:09 6.2K 
[ ]wt22_R2_trm.fastq.gz2018-09-26 19:09 2.7G 
[ ]wt22_trm.bam2018-09-27 20:39 4.2G 
[ ]wt22_trm.bam.samp.bw2018-11-10 19:49 129M 
[ ]wt22_trm_k20.bam2019-07-11 03:46 4.7G 
[ ]wt61_R1_trm.fastq.gz2018-09-26 19:24 2.8G 
[ ]wt61_R1_trm.log2018-09-26 19:24 6.2K 
[ ]wt61_R2_trm.fastq.gz2018-09-26 19:24 2.7G 
[ ]wt61_trm.bam2018-09-27 21:00 4.3G 
[ ]wt61_trm.bam.samp.bw2018-11-10 20:14 129M 
[ ]wt61_trm_k20.bam2019-07-11 04:12 4.8G 
[ ]wt62_R1_trm.fastq.gz2018-09-26 19:28 2.7G 
[ ]wt62_R1_trm.log2018-09-26 19:28 6.1K 
[ ]wt62_R2_trm.fastq.gz2018-09-26 19:28 2.7G 
[ ]wt62_trm.bam2018-09-27 21:21 4.2G 
[ ]wt62_trm.bam.samp.bw2018-11-10 20:38 127M 
[ ]wt62_trm_k20.bam2019-07-11 04:36 4.6G 
[ ]wtIFN_1_R1_trm.fastq.gz2018-09-26 20:04 2.8G 
[ ]wtIFN_1_R1_trm.log2018-09-26 20:04 6.1K 
[ ]wtIFN_1_R2_trm.fastq.gz2018-09-26 20:04 2.8G 
[ ]wtIFN_1_trm.bam2018-09-27 21:42 4.5G 
[ ]wtIFN_1_trm.bam.samp.bw2018-11-10 21:03 128M 
[ ]wtIFN_1_trm_k20.bam2019-07-11 05:01 5.0G 
[ ]wtIFN_2_R1_trm.fastq.gz2018-09-26 20:09 3.7G 
[ ]wtIFN_2_R1_trm.log2018-09-26 20:09 6.2K 
[ ]wtIFN_2_R2_trm.fastq.gz2018-09-26 20:09 3.7G 
[ ]wtIFN_2_trm.bam2018-09-27 22:10 5.9G 
[ ]wtIFN_2_trm.bam.samp.bw2018-11-10 21:30 126M 
[ ]wtIFN_2_trm_k20.bam2019-07-11 05:35 6.5G 
[ ]wtIL4_1_R1_trm.fastq.gz2018-09-26 19:50 3.3G 
[ ]wtIL4_1_R1_trm.log2018-09-26 19:50 6.3K 
[ ]wtIL4_1_R2_trm.fastq.gz2018-09-26 19:50 3.4G 
[ ]wtIL4_1_trm.bam2018-09-27 22:35 5.5G 
[ ]wtIL4_1_trm.bam.samp.bw2018-11-10 21:56 146M 
[ ]wtIL4_1_trm_k20.bam2019-07-11 06:06 6.1G 
[ ]wtIL4_2_R1_trm.fastq.gz2018-09-26 19:54 2.6G 
[ ]wtIL4_2_R1_trm.log2018-09-26 19:54 6.2K 
[ ]wtIL4_2_R2_trm.fastq.gz2018-09-26 19:54 2.6G 
[ ]wtIL4_2_trm.bam2018-09-27 22:55 4.3G 
[ ]wtIL4_2_trm.bam.samp.bw2018-11-10 22:21 146M 
[ ]wtIL4_2_trm_k20.bam2019-07-11 06:29 4.7G 
Apache/2.4.66 (Debian) Server at genomics-lab.fleming.gr Port 443