snpCall               package:Biobase               R Documentation

Get and retrieve SNP call and call probability data.

Description:

     These generic functions access the calls and call probabilities
     stored in objects.

Usage:

     snpCall(object, ...)
     snpCall(object, ...) <- value
     snpCallProbability(object, ...)
     snpCallProbability(object, ...) <- value

Arguments:

  object: Object, possibly derived from class 'SnpSet'.

   value: Matrix with rows representing SNP calls or call probabilities
          and columns samples.

     ...: Additional arguments available to methods.

Value:

     'snpCall' returns a matrix of SNP calls; 'snpCallProbability'
     returns the corresponding matrix of standard errors, when
     available.

Author(s):

     Biocore

See Also:

     'SnpSet-class'

