\HeaderA{snpCall}{Get and retrieve SNP call and call probability data.}{snpCall}
\aliasA{snpCall<\Rdash}{snpCall}{snpCall<.Rdash.}
\aliasA{snpCallProbability}{snpCall}{snpCallProbability}
\aliasA{snpCallProbability<\Rdash}{snpCall}{snpCallProbability<.Rdash.}
\keyword{manip}{snpCall}
\begin{Description}\relax
These generic functions access the calls and call probabilities
stored in objects.
\end{Description}
\begin{Usage}
\begin{verbatim}
snpCall(object, ...)
snpCall(object, ...) <- value
snpCallProbability(object, ...)
snpCallProbability(object, ...) <- value
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{object}] Object, possibly derived from class \code{SnpSet}.
\item[\code{value}] Matrix with rows representing SNP calls or call
probabilities and columns samples.
\item[\code{...}] Additional arguments available to methods.
\end{ldescription}
\end{Arguments}
\begin{Value}
\code{snpCall} returns a matrix of SNP calls;
\code{snpCallProbability} returns the corresponding matrix of standard errors,
when available.
\end{Value}
\begin{Author}\relax
Biocore
\end{Author}
\begin{SeeAlso}\relax
\code{\LinkA{SnpSet-class}{SnpSet.Rdash.class}}
\end{SeeAlso}

