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MASS

BOND

ANGLE

DIHE
nb-ca-nv-hn   4    4.200       180.000           2.000      same as X -ca-nh-X , penalty score=  0.0
ca-ca-cd-cc   1    3.770       180.000           2.000      same as ca-ca-ce-cc, penalty score=142.0
ca-ca-cd-ch   4    2.800       180.000           2.000      same as X -c2-ca-X , penalty score=232.0
ca-ca-nv-hn   4    4.200       180.000           2.000      same as X -ca-nh-X , penalty score=  0.0
ca-cd-ch-n1   2    0.000       180.000           2.000      same as X -c1-cd-X , penalty score= 97.0
ca-ca-cc-na   4    4.390       180.000           2.000      same as ca-ca-ce-na, penalty score=136.0
cc-cd-ch-n1   2    0.000       180.000           2.000      same as X -c1-cd-X , penalty score= 97.0
ca-ca-cc-cd   1    0.585       180.000           2.000      same as ca-ca-ce-c2, penalty score=223.0

IMPROPER
c3-nb-ca-nb        10.5          180.0         2.0          Same as X -n2-ca-n2, penalty score= 48.6 (use general term))
ca-nb-ca-nv         1.1          180.0         2.0          Using the default value
ca-hn-nv-hn         1.1          180.0         2.0          Using the default value
ca-ca-ca-cd         1.1          180.0         2.0          Using the default value
ca-na-ca-nb         1.1          180.0         2.0          Using the default value
ca-cc-na-hn         1.1          180.0         2.0          Using general improper torsional angle  X- X-na-hn, penalty score=  6.0)
ca-cd-cc-na         1.1          180.0         2.0          Using the default value
ca-cc-cd-ch         1.1          180.0         2.0          Using the default value
ca-ca-ca-cc         1.1          180.0         2.0          Using the default value
ca-ca-ca-ha         1.1          180.0         2.0          Using general improper torsional angle  X- X-ca-ha, penalty score=  6.0)
ca-h4-ca-nb         1.1          180.0         2.0          Same as X -X -ca-ha, penalty score= 44.3 (use general term))

NONBON