Index of /fleming/tools/molprobity/modules/cctbx_project/mmtbx/command_line

	Name	Last modified	Size	Description
	Parent Directory		-
	__init__.py	2023-03-18 12:21	27K
	afitt.py	2023-03-18 12:21	585
	afitt_fd.py	2023-03-18 12:21	6.5K
	altloc_remediate.py	2023-03-18 12:21	18K
	analyze_peptides.py	2023-03-18 12:21	246
	analyze_static_disorder.py	2023-03-18 12:21	2.2K
	angle.py	2023-03-18 12:21	4.9K
	anneal_real_space.py	2023-03-18 12:21	3.4K
	apply_ncs_to_ligand.py	2023-03-18 12:21	1.7K
	arginine_geometry.py	2023-03-18 12:21	237
	cablam.py	2023-03-18 12:21	1.2K
	cablam_idealization.py	2023-03-18 12:21	252
	cablam_training.py	2023-03-18 12:21	234
	cablam_validate.py	2023-03-18 12:21	234
	cbetadev.py	2023-03-18 12:21	1.2K
	cc_star.py	2023-03-18 12:21	10K
	cdl_lookup.py	2023-03-18 12:21	2.2K
	chains_as_models.py	2023-03-18 12:21	1.1K
	cif_as_mtz.py	2023-03-18 12:21	27K
	clashscore.py	2023-03-18 12:21	1.2K
	comparama.py	2023-03-18 12:21	222
	compare_ligands.py	2023-03-18 12:21	1.6K
	compute_map_coefficients.py	2023-03-18 12:21	2.3K
	density_modification.py	2023-03-18 12:21	18K
	development.aev.py	2023-03-18 12:21	776
	development_fem.py	2023-03-18 12:21	3.5K
	distance_difference.py	2023-03-18 12:21	10K
	dssp.py	2023-03-18 12:21	1.2K
	dynamics.py	2023-03-18 12:21	4.2K
	emringer.py	2023-03-18 12:21	12K
	emringer_score.py	2023-03-18 12:21	2.1K
	estimate_bijvoet_ratio.py	2023-03-18 12:21	3.2K
	evalurama.py	2023-03-18 12:21	222
	extend_sidechains.py	2023-03-18 12:21	2.3K
	f000.py	2023-03-18 12:21	1.3K
	fab_elbow_angle.py	2023-03-18 12:21	2.8K
	fake_f_obs.py	2023-03-18 12:21	15K
	fest.py	2023-03-18 12:21	209
	fetch_pdb.py	2023-03-18 12:21	6.3K
	find_peaks_holes.py	2023-03-18 12:21	20K
	find_residue_in_pdb.py	2023-03-18 12:21	1.8K
	find_tls_groups.py	2023-03-18 12:21	29K
	fix_rama_outliers.py	2023-03-18 12:21	1.9K
	fix_rotamer_outliers.py	2023-03-18 12:21	2.9K
	flipbase.py	2023-03-18 12:21	183
	fmodel.py	2023-03-18 12:21	17K
	fmodel_simple.py	2023-03-18 12:21	919
	fobs_minus_fobs_map.py	2023-03-18 12:21	258
	geometry_minimization.py	2023-03-18 12:21	17K
	get_related_ensemble.py	2023-03-18 12:21	3.7K
	grow_density.py	2023-03-18 12:21	285
	hbond.py	2023-03-18 12:21	177
	helix_sheet_recs_as_pdb_files.py	2023-03-18 12:21	1.2K
	hydrogenate.py	2023-03-18 12:21	180
	kinemage.py	2023-03-18 12:21	268
	map_box.py	2023-03-18 12:21	55K
	map_comparison.py	2023-03-18 12:21	17K
	map_to_model_histogram.py	2023-03-18 12:21	12K
	map_to_structure_factors.py	2023-03-18 12:21	10K
	map_value_at_point.py	2023-03-18 12:21	6.1K
	maps.py	2023-03-18 12:21	18K
	mask.py	2023-03-18 12:21	1.6K
	massage_data.py	2023-03-18 12:21	3.2K
	matthews.py	2023-03-18 12:21	4.4K
	maximum_entropy_map.py	2023-03-18 12:21	6.4K
	model_idealization.py	2023-03-18 12:21	44K
	model_map.py	2023-03-18 12:21	2.4K
	model_model_distances.py	2023-03-18 12:21	4.1K
	model_vs_data.py	2023-03-18 12:21	171
	model_vs_map.py	2023-03-18 12:21	13K
	model_vs_sequence.py	2023-03-18 12:21	2.3K
	models_as_chains.py	2023-03-18 12:21	1.4K
	molprobity.py	2023-03-18 12:21	11K
	mon_lib_cif_triage.py	2023-03-18 12:21	600
	monomer_library.comp_as_motif.py	2023-03-18 12:21	423
	mp_geo.py	2023-03-18 12:21	179
	mtz2map.py	2023-03-18 12:21	13K
	nonbonded_overlaps.py	2023-03-18 12:21	7.1K
	nqh_minimize.py	2023-03-18 12:21	191
	ntc_validation.py	2023-03-18 12:21	401
	omegalyze.py	2023-03-18 12:21	1.5K
	partial_omit_map.py	2023-03-18 12:21	7.1K
	pdb_atom_selection.py	2023-03-18 12:21	3.2K
	pdb_interpretation.py	2023-03-18 12:21	4.4K
	pdb_view_ad_hoc.py	2023-03-18 12:21	4.5K
	pdbtools.py	2023-03-18 12:21	219
	perigee.py	2023-03-18 12:21	11K
	plan_sad_experiment.py	2023-03-18 12:21	20K
	polder.py	2023-03-18 12:21	256
	prepare_pdb_deposition.py	2023-03-18 12:21	245
	probe2.py	2023-03-18 12:21	170
	probescore_ligand.py	2023-03-18 12:21	1.8K
	process_predicted_model.py	2023-03-18 12:21	349
	prune_model.py	2023-03-18 12:21	18K
	quantum_interface.py	2023-03-18 12:21	237
	r_factor_statistics.py	2023-03-18 12:21	4.1K
	rama_z.py	2023-03-18 12:21	265
	ramalyze.py	2023-03-18 12:21	1.2K
	rank_scale_map.py	2023-03-18 12:21	1.8K
	real_space_correlation.py	2023-03-18 12:21	325
	real_space_diff_map.py	2023-03-18 12:21	10K
	rebuild_cablam_cache.py	2023-03-18 12:21	2.4K
	rebuild_rotarama_cache.py	2023-03-18 12:21	2.4K
	reciprocal_space_arrays.py	2023-03-18 12:21	9.8K
	reduce2.py	2023-03-18 12:21	172
	refine_anomalous_substructure.py	2023-03-18 12:21	1.9K
	remove_outliers.py	2023-03-18 12:21	242
	rigid_bond_test.py	2023-03-18 12:21	1.1K
	ringer.py	2023-03-18 12:21	11K
	rna_validate.py	2023-03-18 12:21	2.2K
	rotalyze.py	2023-03-18 12:21	1.2K
	search_pdb_symmetry.py	2023-03-18 12:21	3.7K
	secondary_structure_restraints.py	2023-03-18 12:21	8.6K
	secondary_structure_validation.py	2023-03-18 12:21	251
	select_best_starting_model.py	2023-03-18 12:21	3.0K
	show_r_factors_by_shell.py	2023-03-18 12:21	4.0K
	show_suspicious_residues.py	2023-03-18 12:21	3.3K
	simulate_low_res_data.py	2023-03-18 12:21	32K
	sisa.py	2023-03-18 12:21	4.7K
	sort_hetatms.py	2023-03-18 12:21	17K
	ss_idealization.py	2023-03-18 12:21	239
	ssm_rmsd_for_chains.py	2023-03-18 12:21	1.8K
	strip_model.py	2023-03-18 12:21	1.3K
	suitename.py	2023-03-18 12:21	320
	super.py	2023-03-18 12:21	5.8K
	superpose.py	2023-03-18 12:21	215
	table_one.py	2023-03-18 12:21	23K
	tls.py	2023-03-18 12:21	214
	tls_analysis.py	2023-03-18 12:21	936
	tls_as_xyz.py	2023-03-18 12:21	1.2K
	validate_H_cl_app.py	2023-03-18 12:21	9.3K
	validate_ions.py	2023-03-18 12:21	1.7K
	validate_ligands.py	2023-03-18 12:21	2.1K
	validate_waters.py	2023-03-18 12:21	724
	validation_summary.py	2023-03-18 12:21	5.8K
	verify_mon_lib_data.py	2023-03-18 12:21	620
	water_screen.py	2023-03-18 12:21	2.6K
	xmanip.py	2023-03-18 12:21	207
	xtriage.py	2023-03-18 12:21	261