B
    §dB  ã               @   s`   d dl mZmZmZ d dlmZ d dlmZ dd„ ZG dd„ de	ƒZ
dd	„ Zed
kr\edƒ‚dS )é    )Úabsolute_importÚdivisionÚprint_function)Úsgtbx)Úrangec             C   sž   |   ¡ dkst‚|  ¡ rt‚t | ¡}| ¡  |g}xd| D ]\}| ¡  ¡ dksRt‚xB| D ]:}t ¡ }| |¡ | |¡ | ¡  ||krX| 	|¡ qXW q:W |S )Né   )r   r   r   )
Ún_ltrÚAssertionErrorÚ
is_centricr   Úspace_groupÚ	make_tidyÚtÚnumÚ
expand_smxÚappend)r   ÚsubgroupÚresultÚs1Ús2© r   út/mnt/filia/a/genomebrowser/www/genomebrowser/fleming/tools/molprobity/modules/cctbx_project/cctbx/sgtbx/subgroups.pyÚ-anomalous_reflection_intensity_primitive_cell   s    




r   c               @   s,   e Zd Zdd„ Zdd„ Zdd„ Zdd„ Zd	S )
Ú	subgroupsc             C   s¶   g | _ | ¡  ¡ | _| | j¡}| ¡ }| ¡ | ¡ ks<t‚| ¡  xlt| ¡ ƒD ]\}t	 
¡ }| ||ƒ¡ x@t|| ¡ ƒD ].}t	 
|¡}| ||ƒ¡ | ¡  |  |¡ q|W qRW d S )N)Ú	_p_groupsÚgroupÚz2p_opÚchange_basisÚorder_pÚorder_zr	   r   r   r   r   r   Ú_add)ÚselfÚparent_group_infoZp_parent_group_infoZp_parent_groupÚi_smxZgroup_iZj_smxr   r   r   r   Ú__init__   s    
zsubgroups.__init__c             C   s,   x| j D ]}||krdS qW | j  |¡ dS )Nr   r   )r   r   )r    r   Úgr   r   r   r   (   s
     zsubgroups._addc             C   s   | j S )N)r   )r    r   r   r   Úgroups_primitive_setting.   s    z"subgroups.groups_primitive_settingc             C   s2   g }| j  ¡ }x| jD ]}| | |¡¡ qW |S )N)r   Úinverser   r   r   )r    r   Zp2z_opr$   r   r   r   Úgroups_parent_setting1   s
    
zsubgroups.groups_parent_settingN)Ú__name__Ú
__module__Ú__qualname__r#   r   r%   r'   r   r   r   r   r      s   r   c             C   sN   |   ¡  t| ƒ ¡ }tdt|ƒƒ x |D ]}tj|d}|  ¡  q(W tƒ  d S )Nznumber of subgroups:)r   )Úshow_summaryr   r'   ÚprintÚlenr   Úspace_group_info)r!   Úsubgrsr   Zsubgroup_infor   r   r   Úshow8   s    
r0   Ú__main__z'Please use the cctbx.subgroups command.N)Ú
__future__r   r   r   Úcctbxr   Ú	six.movesr   r   Úobjectr   r0   r(   ÚRuntimeErrorr   r   r   r   Ú<module>   s   "	