#
# Copyright (C) 2007 by Greg Landrum
#  All rights reserved
#


class SkeletonPoint(object):
  location = None
  shapeMoments = None
  shapeDirs = None
  molFeatures = None
  featmapFeatures = None
  fracVol = 0.0

  def __init__(self, *args, **kwargs):
    self._initMemberData()
    self.location = kwargs.get('location', None)

  def _initMemberData(self):
    self.shapeMoments = (0.0, ) * 3
    self.shapeDirs = [None] * 3
    self.molFeatures = []
    self.featmapFeatures = []


class ShapeWithSkeleton(object):
  grid = None
  skelPts = None

  def __init__(self, *args, **kwargs):
    self._initMemberData()

  def _initMemberData(self):
    self.skelPts = []


class SubshapeShape(object):
  shapes = None  # a list of ShapeWithSkeleton objects at multiple resolutions (low to high)
  featMap = None
  keyFeat = None

  def __init__(self, *args, **kwargs):
    self._initMemberData()

  def _initMemberData(self):
    self.shapes = []


def _displaySubshapeSkelPt(viewer, skelPt, cgoNm, color):
  viewer.server.sphere(tuple(skelPt.location), .5, color, cgoNm)
  if hasattr(skelPt, 'shapeDirs'):
    momBeg = skelPt.location - skelPt.shapeDirs[0]
    momEnd = skelPt.location + skelPt.shapeDirs[0]
    viewer.server.cylinder(tuple(momBeg), tuple(momEnd), .1, color, cgoNm)


def DisplaySubshapeSkeleton(viewer, shape, name, color=(1, 0, 1), colorByOrder=False):
  orderColors = ((1, 0, 0), (0, 1, 0), (0, 0, 1), (1, 1, 0), (1, 0, 1), (0, 1, 1))
  cgoNm = '%s-skeleton' % name
  viewer.server.resetCGO(cgoNm)
  for i, pt in enumerate(shape.skelPts):
    if colorByOrder:
      color = orderColors[i % len(orderColors)]
    _displaySubshapeSkelPt(viewer, pt, cgoNm, color)


def DisplaySubshape(viewer, shape, name, showSkelPts=True, color=(1, 0, 1)):
  import os
  import tempfile
  from rdkit import Geometry
  fName = tempfile.NamedTemporaryFile(suffix='.grd', delete=False).name
  Geometry.WriteGridToFile(shape.grid, fName)
  viewer.server.loadSurface(fName, name, '', 2.5)
  if showSkelPts:
    DisplaySubshapeSkeleton(viewer, shape, name, color)
  # On Windows, the file cannot be deleted if the viewer still has the file open.
  # Pause for a moment, to give the viewer a chance, then try again.
  try:
    os.unlink(fName)
  except Exception:
    import time
    time.sleep(.5)
    try:
      os.unlink(fName)
    except Exception:
      # Fall back to the default of letting the system clean up the temporary directory.
      pass