B ‰°bgã@s0dZdd„Zdd„ZGdd„deƒZdd„Zd S) a+Parse the enzyme.dat file from Enzyme at ExPASy. See https://www.expasy.org/enzyme/ Tested with the release of 03-Mar-2009. Functions: - read Reads a file containing one ENZYME entry - parse Reads a file containing multiple ENZYME entries Classes: - Record Holds ENZYME data. ccsxt|ƒ}|sP|VqWdS)z¡Parse ENZYME records. This function is for parsing ENZYME files containing multiple records. Arguments: - handle - handle to the file. N)Ú__read)ÚhandleÚrecord©rú0lib/python3.7/site-packages/Bio/ExPASy/Enzyme.pyÚparses rcCs t|ƒ}| ¡}|rtdƒ‚|S)z¥Read one ENZYME record. This function is for parsing ENZYME files containing exactly one record. Arguments: - handle - handle to the file. z!More than one ENZYME record found)rÚreadÚ ValueError)rrZ remainderrrrr(s rc@s(eZdZdZdd„Zdd„Zdd„ZdS) ÚRecordaðHolds information from an ExPASy ENZYME record as a Python dictionary. Each record contains the following keys: - ID: EC number - DE: Recommended name - AN: Alternative names (if any) - CA: Catalytic activity - CF: Cofactors (if any) - PR: Pointers to the Prosite documentation entrie(s) that correspond to the enzyme (if any) - DR: Pointers to the Swiss-Prot protein sequence entrie(s) that correspond to the enzyme (if any) - CC: Comments cCsNt |¡d|d<d|d<g|d<d|d<d|d<g|d<g|d<g|d <d S) zInitialize the class.ÚÚIDÚDEÚANÚCAÚCFÚCCÚPRÚDRN)ÚdictÚ__init__)ÚselfrrrrLs zRecord.__init__cCsP|dr@|dr*d|jj|d|dfSd|jj|dfSn d|jjSdS)Nr r z %s (%s, %s)z%s (%s)z%s ( ))Ú __class__Ú__name__)rrrrÚ__repr__Xs zRecord.__repr__c Csrd|dd|ddt|dƒd|dd d |d d t|d ƒdt|dƒdt|dƒg}d |¡S)NzID: r zDE: r zAN: r zCA: 'rú'zCF: rzCC: rzPR: rzDR: %d RecordsrÚ )ÚreprÚlenÚjoin)rÚoutputrrrÚ__str__as   zRecord.__str__N)rÚ __module__Ú __qualname__Ú__doc__rrrrrrrr :s  r c Csd}xþ|D]ô}|dd…|dd… ¡}}|dkrHtƒ}||d<q |dkrb|d|7<q |dkr®|drž|dd d¡sž|ddd|7<n|d |¡q |d krÈ|d |7<q |d kr| d ¡ d ¡}x8|D]0}| d ¡\}}| ¡| ¡g} |d  | ¡qèWq |d krR|d rH|d d|7<n||d <q |dkrŽ| d¡slt‚|dd… d ¡}|d |¡q |dkrð| d¡r¼|d |dd…¡n2| d¡r|dr|dd|dd…7<q |dkr |r |Sq q W|rtdƒ‚dS)Néér r r éÿÿÿÿÚ.ú rrú;ú,rrz PROSITE; é rz-!- éz éz//zUnexpected end of stream) Úrstripr ÚendswithÚappendÚsplitÚstripÚ startswithÚAssertionErrorr) rrÚlineÚkeyÚvalueZ pair_dataZpairZt1Zt2ÚrowrrrrrsN         rN)r"rrrr rrrrrÚs8