Sample DB gene allele coverage depth diffs uncertainty divergence length maxMAF clusterid seqid annotation R_2018_01_10_11_21_01_user_IONAS-378-DrSkretas_KEELPNO_PHlab_180110_GSkP6_KLPNC5_PH4C3-5.KLPNC5-642Salm.IonXpress_032 PlasmidFinder Col _Col-plasmid_1_J01566__22 92.164 20.333 21snp1indel20holes 8.468 268 0.455 138 _22 R_2018_01_10_11_21_01_user_IONAS-378-DrSkretas_KEELPNO_PHlab_180110_GSkP6_KLPNC5_PH4C3-5.KLPNC5-642Salm.IonXpress_032 PlasmidFinder ColRNAI_1 ColRNAI_1_DQ298019 90.769 51.773 13snp12holes edge0.0 11.017 130 0.089 135 DQ298019