reczko@max:/data/images/proton2/run342/inserts$ /data/results/tools/align/bowtie2-2.3.2/bowtie2-build inserted-sequences.fa inserted-sequences-run342
Settings:
  Output files: "inserted-sequences-run342.*.bt2"
  Line rate: 6 (line is 64 bytes)
cp ../pip.sh ../pip-check-inserts.sh
reczko@max:/data/images/proton2/run342/inserts$ samtools faidx inserted-sequences.fa

reczko@max:/data/images/proton2/run342$ ./pip-check-inserts.sh &> pip-check-inserts.log2 &