samplename filename condition paired stranded wt1 /data/images/proton/run326/www/GSR11_wt1.bam WT single yes KPM1 /data/images/proton/run326/www/GSR12_KPM1.bam KPM single yes KPM2 /data/images/proton/run326/www/GSR13_KPM3.bam KPM single yes KPM3 /data/images/proton/run326/www/GSR14_KPM4.bam KPM single yes