/* Philip T.L.C. Clausen Jan 2017 plan@dtu.dk */

/*
 * Copyright (c) 2017, Philip Clausen, Technical University of Denmark
 * All rights reserved.
 * 
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 * 
 *		http://www.apache.org/licenses/LICENSE-2.0
 * 
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
*/

#ifndef COMPKMERS
typedef struct compKmers CompKmers;
struct compKmers {
	long unsigned n;
	long unsigned size;
	long unsigned *kmers;
};
#define COMPKMERS 1
#endif

void allocCompKmers(CompKmers *compressor, int size);
void reallocCompKmers(CompKmers *compressor, int size);
int pushCompKmers(CompKmers *compressor, char *qseq, int kmersize);