##gff-version 3
##source-version rtracklayer 1.34.1
##date 2017-05-08
##genome-build .	hg19
chr1	rtracklayer	sequence_feature	28835236	28835400	.	*	.	count=1706;fpk=10339.3939393939;logOddScore=701.108024491759;pval=0;pvalAdj=0;CTL_count=592;CTL_fpk=3587.87878787879;CTL_logOddScore=-701.396920166742;eFDR=0.4
chr1	rtracklayer	sequence_feature	108113446	108113610	.	*	.	count=1404;fpk=8509.09090909091;logOddScore=672.157903482407;pval=0;pvalAdj=0;CTL_count=2345;CTL_fpk=14212.1212121212;CTL_logOddScore=-675.784350688763;eFDR=0.4
chr1	rtracklayer	sequence_feature	149224021	149224185	.	*	.	count=1462;fpk=8860.60606060606;logOddScore=704.455824370663;pval=0;pvalAdj=0;CTL_count=497;CTL_fpk=3012.12121212121;CTL_logOddScore=-702.884999669265;eFDR=0.4
chr1	rtracklayer	sequence_feature	149832211	149832375	.	*	.	count=1542;fpk=9345.45454545455;logOddScore=699.991599964993;pval=0;pvalAdj=0;CTL_count=1020;CTL_fpk=6181.81818181818;CTL_logOddScore=-694.936101448176;eFDR=0.4
chr1	rtracklayer	sequence_feature	161438971	161439135	.	*	.	count=1470;fpk=8909.09090909091;logOddScore=710.083728745714;pval=0;pvalAdj=0;CTL_count=196;CTL_fpk=1187.87878787879;CTL_logOddScore=-707.975166026489;eFDR=0.4
chr3	rtracklayer	sequence_feature	186505501	186505650	.	*	.	count=4953;fpk=33020;logOddScore=1097.91622006902;pval=0;pvalAdj=0;CTL_count=1371;CTL_fpk=9140;CTL_logOddScore=-409.132327802848;eFDR=0
chr4	rtracklayer	sequence_feature	7584306	7584460	.	*	.	count=1088;fpk=7019.35483870968;logOddScore=150.326650352608;pval=0;pvalAdj=0;CTL_count=1509;CTL_fpk=9735.48387096774;CTL_logOddScore=-14.0251602756004;eFDR=0.333333333333333
chr4	rtracklayer	sequence_feature	76807151	76807305	.	*	.	count=670;fpk=4322.58064516129;logOddScore=101.952497728732;pval=0;pvalAdj=0;CTL_count=1573;CTL_fpk=10148.3870967742;CTL_logOddScore=-14.0251610864683;eFDR=0.333333333333333
chr4	rtracklayer	sequence_feature	134082906	134083060	.	*	.	count=726;fpk=4683.87096774194;logOddScore=132.987567877298;pval=0;pvalAdj=0;CTL_count=1211;CTL_fpk=7812.90322580645;CTL_logOddScore=-27.3168020131079;eFDR=0.333333333333333
chr6	rtracklayer	sequence_feature	4428301	4428450	.	*	.	count=1321;fpk=8806.66666666667;logOddScore=733.991992128042;pval=0;pvalAdj=0;CTL_count=1411;CTL_fpk=9406.66666666667;CTL_logOddScore=-666.704836381087;eFDR=0.111111111111111
chr6	rtracklayer	sequence_feature	26031751	26031900	.	*	.	count=1363;fpk=9086.66666666667;logOddScore=764.657642948119;pval=0;pvalAdj=0;CTL_count=866;CTL_fpk=5773.33333333333;CTL_logOddScore=-683.512060851617;eFDR=0.111111111111111
chr6	rtracklayer	sequence_feature	26055901	26056050	.	*	.	count=2295;fpk=15300;logOddScore=799.327111912411;pval=0;pvalAdj=0;CTL_count=1287;CTL_fpk=8580;CTL_logOddScore=-670.509821548686;eFDR=0.111111111111111
chr6	rtracklayer	sequence_feature	26157301	26157450	.	*	.	count=1976;fpk=13173.3333333333;logOddScore=845.399681435733;pval=0;pvalAdj=0;CTL_count=844;CTL_fpk=5626.66666666667;CTL_logOddScore=-684.196531171044;eFDR=0.111111111111111
chr6	rtracklayer	sequence_feature	26205151	26205300	.	*	.	count=1692;fpk=11280;logOddScore=836.54748940158;pval=0;pvalAdj=0;CTL_count=776;CTL_fpk=5173.33333333333;CTL_logOddScore=-686.316620528505;eFDR=0.111111111111111
chr6	rtracklayer	sequence_feature	27778201	27778350	.	*	.	count=1592;fpk=10613.3333333333;logOddScore=819.683733169684;pval=0;pvalAdj=0;CTL_count=866;CTL_fpk=5773.33333333333;CTL_logOddScore=-683.512060851617;eFDR=0.111111111111111
chr6	rtracklayer	sequence_feature	27792151	27792300	.	*	.	count=1724;fpk=11493.3333333333;logOddScore=827.535447248081;pval=0;pvalAdj=0;CTL_count=1174;CTL_fpk=7826.66666666667;CTL_logOddScore=-673.985322759228;eFDR=0.111111111111111
chr6	rtracklayer	sequence_feature	27798901	27799050	.	*	.	count=1697;fpk=11313.3333333333;logOddScore=831.65966333898;pval=0;pvalAdj=0;CTL_count=951;CTL_fpk=6340;CTL_logOddScore=-680.873295519751;eFDR=0.111111111111111
chr6	rtracklayer	sequence_feature	28950001	28950150	.	*	.	count=1923;fpk=12820;logOddScore=773.302422534362;pval=0;pvalAdj=0;CTL_count=3240;CTL_fpk=21600;CTL_logOddScore=-611.105676235905;eFDR=0.111111111111111
chr7	rtracklayer	sequence_feature	98479501	98479650	.	*	.	count=715;fpk=4766.66666666667;logOddScore=139.74074910877;pval=0;pvalAdj=0;CTL_count=100;CTL_fpk=666.666666666667;CTL_logOddScore=-21.4810726881224;eFDR=0.75
chr7	rtracklayer	sequence_feature	148680901	148681050	.	*	.	count=1744;fpk=11626.6666666667;logOddScore=901.767911185464;pval=0;pvalAdj=0;CTL_count=1225;CTL_fpk=8166.66666666667;CTL_logOddScore=-467.174345432752;eFDR=0.75
chr7	rtracklayer	sequence_feature	148684201	148684350	.	*	.	count=2348;fpk=15653.3333333333;logOddScore=888.582563349662;pval=0;pvalAdj=0;CTL_count=1432;CTL_fpk=9546.66666666667;CTL_logOddScore=-426.298108120836;eFDR=0.75
chr8	rtracklayer	sequence_feature	56754881	56755200	.	*	.	count=6183;fpk=19321.875;logOddScore=634.354646183398;pval=0;pvalAdj=0;CTL_count=9796;CTL_fpk=30612.5;CTL_logOddScore=-267.908772987494;eFDR=0
chr8	rtracklayer	sequence_feature	70602401	70602560	.	*	.	count=2316;fpk=14475;logOddScore=1107.77636512677;pval=0;pvalAdj=0;CTL_count=4444;CTL_fpk=27775;CTL_logOddScore=-461.372924196118;eFDR=0
chr9	rtracklayer	sequence_feature	35657851	35658000	.	*	.	count=8098;fpk=53986.6666666667;logOddScore=1037.53028432763;pval=0;pvalAdj=0;CTL_count=1748;CTL_fpk=11653.3333333333;CTL_logOddScore=-348.530927711583;eFDR=0
chr12	rtracklayer	sequence_feature	20704351	20704650	.	*	.	count=34988;fpk=116626.666666667;logOddScore=25.3135501054436;pval=8.76850852544093e-57;pvalAdj=8.76850852544093e-57;CTL_count=35465;CTL_fpk=118216.666666667;CTL_logOddScore=99.6661231814697;eFDR=8.76850852544093e-57
chr12	rtracklayer	sequence_feature	127650751	127650900	.	*	.	count=20212;fpk=134746.666666667;logOddScore=954.018303109518;pval=0;pvalAdj=0;CTL_count=31467;CTL_fpk=209780;CTL_logOddScore=-486.90749987094;eFDR=0
chr14	rtracklayer	sequence_feature	50053531	50053685	.	*	.	count=7260;fpk=46838.7096774194;logOddScore=169.162637564138;pval=0;pvalAdj=0;CTL_count=5110;CTL_fpk=32967.7419354839;CTL_logOddScore=-41.4218578457396;eFDR=0
chr14	rtracklayer	sequence_feature	50329121	50329430	.	*	.	count=14986;fpk=48341.935483871;logOddScore=19.5041152351982;pval=5.19696515772827e-45;pvalAdj=5.19696515772827e-45;CTL_count=12804;CTL_fpk=41303.2258064516;CTL_logOddScore=117.18002061674;eFDR=5.19696515772827e-45
chr15	rtracklayer	sequence_feature	65588406	65588560	.	*	.	count=465;fpk=3000;logOddScore=290.52080726258;pval=0;pvalAdj=0;CTL_count=994;CTL_fpk=6412.90322580645;CTL_logOddScore=-187.712445086309;eFDR=0
chr15	rtracklayer	sequence_feature	65597086	65597240	.	*	.	count=568;fpk=3664.51612903226;logOddScore=272.289695843942;pval=0;pvalAdj=0;CTL_count=959;CTL_fpk=6187.09677419355;CTL_logOddScore=-167.198971022168;eFDR=0
chr15	rtracklayer	sequence_feature	66795081	66795235	.	*	.	count=224;fpk=1445.16129032258;logOddScore=25.8962257103952;pval=2.94130808171686e-20;pvalAdj=4.41196212257529e-20;CTL_count=187;CTL_fpk=1206.45161290323;CTL_logOddScore=20.2228578200804;eFDR=0.25
chr15	rtracklayer	sequence_feature	96289101	96289255	.	*	.	count=326;fpk=2103.22580645161;logOddScore=39.4769943565394;pval=1.07245910953338e-41;pvalAdj=2.14491821906676e-41;CTL_count=253;CTL_fpk=1632.25806451613;CTL_logOddScore=42.4232280592441;eFDR=1.07245910953338e-41
chr16	rtracklayer	sequence_feature	33963041	33963410	.	*	.	count=77160;fpk=208540.540540541;logOddScore=356.455343498576;pval=0;pvalAdj=0;CTL_count=114695;CTL_fpk=309986.486486487;CTL_logOddScore=284.102439049421;eFDR=0
chr16	rtracklayer	sequence_feature	33963596	33963780	.	*	.	count=45757;fpk=247335.135135135;logOddScore=213.321073301306;pval=0;pvalAdj=0;CTL_count=58280;CTL_fpk=315027.027027027;CTL_logOddScore=276.755413273969;eFDR=0
chr18	rtracklayer	sequence_feature	77773051	77773200	.	*	.	count=55993;fpk=373286.666666667;logOddScore=0.184081242769025;pval=0.448111225885122;pvalAdj=0.448111225885122;CTL_count=80915;CTL_fpk=539433.333333333;CTL_logOddScore=688.317782032466;eFDR=0.448111225885122
chr19	rtracklayer	sequence_feature	24183601	24183750	.	*	.	count=5128;fpk=34186.6666666667;logOddScore=295.888812801031;pval=0;pvalAdj=0;CTL_count=8899;CTL_fpk=59326.6666666667;CTL_logOddScore=214.602039579189;eFDR=0
chr19	rtracklayer	sequence_feature	24184051	24184200	.	*	.	count=2330;fpk=15533.3333333333;logOddScore=175.21287771878;pval=0;pvalAdj=0;CTL_count=5978;CTL_fpk=39853.3333333333;CTL_logOddScore=-187.40431123092;eFDR=0
chr19	rtracklayer	sequence_feature	24184501	24184950	.	*	.	count=9812;fpk=21804.4444444444;logOddScore=497.344628049377;pval=0;pvalAdj=0;CTL_count=14113;CTL_fpk=31362.2222222222;CTL_logOddScore=-437.741025048568;eFDR=0
chr19	rtracklayer	sequence_feature	24187051	24187350	.	*	.	count=10156;fpk=33853.3333333333;logOddScore=536.716439055874;pval=0;pvalAdj=0;CTL_count=9613;CTL_fpk=32043.3333333333;CTL_logOddScore=-273.380334534951;eFDR=0
chr19	rtracklayer	sequence_feature	36066601	36066900	.	*	.	count=53238;fpk=177460;logOddScore=157.841322520113;pval=0;pvalAdj=0;CTL_count=65954;CTL_fpk=219846.666666667;CTL_logOddScore=-5.89298420318619;eFDR=0
chr20	rtracklayer	sequence_feature	2634901	2635050	.	*	.	count=34;fpk=226.666666666667;logOddScore=156.207446676187;pval=0.734103218153833;pvalAdj=1;CTL_count=15;CTL_fpk=100;CTL_logOddScore=-155.42009163053;eFDR=0.734103218153833
chr20	rtracklayer	sequence_feature	2636701	2637000	.	*	.	count=65;fpk=216.666666666667;logOddScore=179.820434094611;pval=3.60414303992951e-13;pvalAdj=1.15332577277744e-12;CTL_count=17;CTL_fpk=56.6666666666667;CTL_logOddScore=-178.215722162076;eFDR=0.6
chr20	rtracklayer	sequence_feature	2637601	2637750	.	*	.	count=39;fpk=260;logOddScore=148.915869347781;pval=0.998793679198317;pvalAdj=1;CTL_count=19;CTL_fpk=126.666666666667;CTL_logOddScore=-145.527485871324;eFDR=0.998793679198317
chr20	rtracklayer	sequence_feature	17943451	17943600	.	*	.	count=68;fpk=453.333333333333;logOddScore=190.011284550608;pval=2.76446266868799e-26;pvalAdj=1.10578506747519e-25;CTL_count=33;CTL_fpk=220;CTL_logOddScore=-181.265301683801;eFDR=0.75
chr20	rtracklayer	sequence_feature	26189251	26189550	.	*	.	count=65;fpk=216.666666666667;logOddScore=156.465577502086;pval=0.705399882371413;pvalAdj=1;CTL_count=30;CTL_fpk=100;CTL_logOddScore=-155.71556813297;eFDR=0.705399882371413
chr20	rtracklayer	sequence_feature	37053751	37053900	.	*	.	count=45;fpk=300;logOddScore=153.646293989566;pval=0.929403512263888;pvalAdj=1;CTL_count=18;CTL_fpk=120;CTL_logOddScore=-147.916921968605;eFDR=0.929403512263888
chr20	rtracklayer	sequence_feature	37055851	37056000	.	*	.	count=40;fpk=266.666666666667;logOddScore=144.728154104221;pval=0.999995008131246;pvalAdj=1;CTL_count=21;CTL_fpk=140;CTL_logOddScore=-140.896939618879;eFDR=0.999995008131246
chr20	rtracklayer	sequence_feature	37062451	37062600	.	*	.	count=70;fpk=466.666666666667;logOddScore=151.836532852854;pval=0.980737685149653;pvalAdj=1;CTL_count=20;CTL_fpk=133.333333333333;CTL_logOddScore=-143.188411124756;eFDR=0.980737685149653
chr20	rtracklayer	sequence_feature	42087001	42087150	.	*	.	count=34;fpk=226.666666666667;logOddScore=153.646907012039;pval=0.929376138814548;pvalAdj=1;CTL_count=16;CTL_fpk=106.666666666667;CTL_logOddScore=-152.859552099431;eFDR=0.929376138814548
chr22	rtracklayer	sequence_feature	43011301	43011450	.	*	.	count=4155;fpk=27700;logOddScore=243.274029640767;pval=0;pvalAdj=0;CTL_count=1400;CTL_fpk=9333.33333333333;CTL_logOddScore=293.104921974988;eFDR=0
chrX	rtracklayer	sequence_feature	108297761	108297920	.	*	.	count=5043;fpk=31518.75;logOddScore=209.283153837783;pval=0;pvalAdj=0;CTL_count=7616;CTL_fpk=47600;CTL_logOddScore=-26.2390813896972;eFDR=0