#!/bin/bash
PATH=/data/results/tools/bedtools/bedtools2/bin:$PATH; export PATH
#Sampling to smallest library containing3744432 reads
ln -s . mm10
echo PH3R1-R.bam
/data/results/tools/proton/tophat2stranded-sampled-bigwig1.sh PH3R1-R.bam /data/results/reference/rno/Rattus_norvegicus/Ensembl/Rnor_6.0/Sequence/WholeGenomeFasta/genome.fa.fai  1