Dear all,

I've made hubs with the tracks
for the MALAT1/NEAT2 ChartSeq paper.
All avail. tracks related to ChartSeq are contained.

The 1st hub contains all conditions for the 1st replicate
The 2nd hub contains all conditions for the 2nd replicate

As these are many tracks, upon inital display you might
have to reload the page several times in case one track does
not display.

BW,
Martin

http://genomics-lab.fleming.gr/cgi-bin/hgTracks?db=hg19&hubUrl=http://genomics-lab.fleming.gr/fleming/PHlab/MALAT1_and_NEAT1/hub.txt
MALAT1_CO1
MALAT1_CO2
NEAT1_CO1
NEAT1_CO2
MALAT1_CO1_CHART-seq_Ethanol_treatment_rep1
MALAT1_CO2_CHART-seq_Ethanol_treatment_rep1
MALAT1_Sense_CHART-seq_Ethanol_treatment_rep1
MALAT1_CO1_CHART-seq_E2_treatment_rep1
MALAT1_CO2_CHART-seq_E2_treatment_rep1
MALAT1_Sense_CHART-seq_E2_treatment_rep1
MALAT1_Sense_CHART-seq_DMSO_treatment_rep1
MALAT1_CO2_CHART-seq_DMSO_treatment_rep1
MALAT1_CO1_CHART-seq_DMSO_treatment_rep1
MALAT1_Sense_CHART-seq_Flavopiridol_treatment_rep1
MALAT1_CO1_CHART-seq_Flavopiridol_treatment_rep1
MALAT1_CO2_CHART-seq_Flavopiridol_treatment_rep1

http://genomics-lab.fleming.gr/cgi-bin/hgTracks?db=hg19&hubUrl=http://genomics-lab.fleming.gr/fleming/PHlab/MALAT1_and_NEAT1/hub2.txt
MALAT1_CO1_CHART-seq_Ethanol_treatment_rep2
MALAT1_CO2_CHART-seq_Ethanol_treatment_rep2
MALAT1_Sense_CHART-seq_Ethanol_treatment_rep2
MALAT1_CO1_CHART-seq_E2_treatment_rep2
MALAT1_CO2_CHART-seq_E2_treatment_rep2
MALAT1_Sense_CHART-seq_E2_treatment_rep2
MALAT1_CO1_CHART-seq_DMSO_treatment_rep2
MALAT1_CO2_CHART-seq_DMSO_treatment_rep2
MALAT1_Sense_CHART-seq_DMSO_treatment_rep2
MALAT1_CO1_CHART-seq_Flavopiridol_treatment_rep2
MALAT1_CO2_CHART-seq_Flavopiridol_treatment_rep2
MALAT1_Sense_CHART-seq_Flavopiridol_treatment_rep2

ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411221/suppl/GSM1411221_MCF7_MALAT1_CO2_CHART-seq_Ethanol_treatment_rep1_norm.bw

ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411234/suppl/GSM1411234_MCF7_MALAT1_CO1_CHART-seq_E2_treatment_rep1_norm.bw
~/bak/~/bak/
GSE58444



ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411220/suppl/GSM1411220_MCF7_MALAT1_CO1_CHART-seq_Ethanol_treatment_rep1_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411221/suppl/GSM1411221_MCF7_MALAT1_CO2_CHART-seq_Ethanol_treatment_rep1_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411222/suppl/GSM1411222_MCF7_MALAT1_Sense_CHART-seq_Ethanol_treatment_rep1_norm.bw

ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411227/suppl/GSM1411227_MCF7_MALAT1_CO1_CHART-seq_Ethanol_treatment_rep2_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411228/suppl/GSM1411228_MCF7_MALAT1_CO2_CHART-seq_Ethanol_treatment_rep2_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411229/suppl/GSM1411229_MCF7_MALAT1_Sense_CHART-seq_Ethanol_treatment_rep2_norm.bw

ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411234/suppl/GSM1411234_MCF7_MALAT1_CO1_CHART-seq_E2_treatment_rep1_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411235/suppl/GSM1411235_MCF7_MALAT1_CO2_CHART-seq_E2_treatment_rep1_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411236/suppl/GSM1411236_MCF7_MALAT1_Sense_CHART-seq_E2_treatment_rep1_norm.bw

ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411241/suppl/GSM1411241_MCF7_MALAT1_CO1_CHART-seq_E2_treatment_rep2_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411242/suppl/GSM1411242_MCF7_MALAT1_CO2_CHART-seq_E2_treatment_rep2_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411243/suppl/GSM1411243_MCF7_MALAT1_Sense_CHART-seq_E2_treatment_rep2_norm.bw

ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411250/suppl/GSM1411250_MCF7_MALAT1_Sense_CHART-seq_DMSO_treatment_rep1_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411249/suppl/GSM1411249_MCF7_MALAT1_CO2_CHART-seq_DMSO_treatment_rep1_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411248/suppl/GSM1411248_MCF7_MALAT1_CO1_CHART-seq_DMSO_treatment_rep1_norm.bw


ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411255/suppl/GSM1411255_MCF7_MALAT1_CO1_CHART-seq_DMSO_treatment_rep2_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411256/suppl/GSM1411256_MCF7_MALAT1_CO2_CHART-seq_DMSO_treatment_rep2_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411257/suppl/GSM1411257_MCF7_MALAT1_Sense_CHART-seq_DMSO_treatment_rep2_norm.bw


ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411264/suppl/GSM1411264_MCF7_MALAT1_Sense_CHART-seq_Flavopiridol_treatment_rep1_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411262/suppl/GSM1411262_MCF7_MALAT1_CO1_CHART-seq_Flavopiridol_treatment_rep1_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411263/suppl/GSM1411263_MCF7_MALAT1_CO2_CHART-seq_Flavopiridol_treatment_rep1_norm.bw

ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411269/suppl/GSM1411269_MCF7_MALAT1_CO1_CHART-seq_Flavopiridol_treatment_rep2_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411270/suppl/GSM1411270_MCF7_MALAT1_CO2_CHART-seq_Flavopiridol_treatment_rep2_norm.bw
ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1411nnn/GSM1411271/suppl/GSM1411271_MCF7_MALAT1_Sense_CHART-seq_Flavopiridol_treatment_rep2_norm.bw