user group size date filename reczko users 1188 May 13 2016 chippip.sh reczko users 15061 May 4 2016 README-processing.txt reczko users 1187756111 Apr 25 2016 R_2016_04_19_11_40_37_user_IONAS-288-ITlab-PHlab-DrSkretas_160419_ITC109_PHR16-17_GSKP4-5.GSKP4-Ab42.IonXpress_015.fastq reczko users 2515828351 Apr 25 2016 R_2016_04_19_11_40_37_user_IONAS-288-ITlab-PHlab-DrSkretas_160419_ITC109_PHR16-17_GSKP4-5.GSKP5-SOD.IonXpress_016.fastq reczko users 88 Feb 29 2016 get-avg-insert-len.awk reczko users 351 Feb 29 2016 get-exclusive1.awk reczko users 3034 Feb 29 2016 mails.txt reczko users 187 Feb 29 2016 count-exclusive1.awk reczko gfusers 4096 Feb 29 2016 www reczko users 434 Feb 2 2016 merge-inserts2.awk reczko gfusers 461 Mar 10 2015 IMP3-unmapped-blast1000-species.txt reczko gfusers 421 Mar 10 2015 IMP2-unmapped-blast1000-species.txt reczko gfusers 544 Mar 10 2015 IMP1-unmapped-blast1000-species.txt reczko gfusers 134669 Mar 9 2015 IMP1-unmapped-blast1000.txt reczko gfusers 134668 Mar 9 2015 IMP2-unmapped-blast1000.txt reczko gfusers 131609 Mar 9 2015 IMP3-unmapped-blast1000.txt reczko gfusers 3181 Mar 9 2015 README-detect-contamination.txt reczko gfusers 2737738121 Mar 9 2015 IMP2-unaligned.bam reczko gfusers 3243500402 Mar 9 2015 IMP1-unaligned.bam reczko gfusers 3705738000 Mar 9 2015 unaligned.bam reczko gfusers 982859557 Mar 9 2015 unpaired.bam reczko gfusers 470 Mar 9 2015 merge-inserts2.awk reczko gfusers 249555943 Mar 9 2015 insert_samples.csv reczko gfusers 427 Mar 9 2015 merge-inserts1.awk reczko gfusers 151 Mar 8 2015 insert_samples.txt reczko gfusers 6080584 Mar 8 2015 015_IMP3_Ab42Round2.ins.fa.clust.clstr.size.fa reczko gfusers 175702263 Mar 8 2015 009_IMP1_4-5-6-7PeptideLinrary.ins.fa.clust.clstr.size.fa reczko gfusers 247062282 Mar 7 2015 009_IMP1_4-5-6-7PeptideLinrary.ins.fa.clust.clstr reczko gfusers 115205 Mar 7 2015 009_IMP1_4-5-6-7PeptideLinrary.ins.log reczko gfusers 171497216 Mar 7 2015 009_IMP1_4-5-6-7PeptideLinrary.ins.fa.clust reczko gfusers 1766175 Mar 6 2015 011_IMP2_A4VRound4.ins.fa.clust.clstr.size.fa reczko gfusers 271778656 Mar 6 2015 015_IMP3_Ab42Round2.ins.fa.clust.clstr reczko gfusers 91862 Mar 6 2015 015_IMP3_Ab42Round2.ins.log reczko gfusers 5902012 Mar 6 2015 015_IMP3_Ab42Round2.ins.fa.clust reczko gfusers 253909486 Mar 6 2015 011_IMP2_A4VRound4.ins.fa.clust.clstr reczko gfusers 50555 Mar 6 2015 011_IMP2_A4VRound4.ins.log reczko gfusers 1713104 Mar 6 2015 011_IMP2_A4VRound4.ins.fa.clust reczko gfusers 12288 Mar 6 2015 n0 reczko gfusers 4096 Mar 6 2015 n1 reczko gfusers 212084351 Mar 6 2015 015_IMP3_Ab42Round2.ins.fa reczko gfusers 215914802 Mar 6 2015 009_IMP1_4-5-6-7PeptideLinrary.ins.fa reczko gfusers 193996716 Mar 6 2015 011_IMP2_A4VRound4.ins.fa reczko gfusers 1779 Mar 6 2015 get-ins2.sh reczko gfusers 0 Mar 6 2015 foo.ins reczko gfusers 358656 Mar 5 2015 IonXpress_015_IMP3_Ab42Round2.aligned.bam.bam.samstat.html reczko gfusers 1440 Mar 5 2015 get-ins1.sh reczko gfusers 3536056362 Mar 5 2015 IonXpress_011_IMP2_A4VRound4.aligned.sam reczko gfusers 4194368415 Mar 5 2015 IonXpress_009_IMP1_4-5-6-7PeptideLinrary.aligned.sam reczko gfusers 183 Mar 5 2015 header.txt reczko gfusers 0 Mar 4 2015 IonXpress_011_IMP2_A4VRound4.aligned.ins.fa reczko gfusers 0 Mar 4 2015 IonXpress_009_IMP1_4-5-6-7PeptideLinrary.aligned.ins.fa reczko gfusers 4096 Mar 4 2015 extract_insert reczko gfusers 16 Mar 4 2015 IonXpress_015_IMP3_Ab42Round2.ins.fa reczko gfusers 412 Mar 4 2015 extract_insert1.awk reczko gfusers 141 Mar 4 2015 backbone_wo_insert.dict reczko gfusers 24 Mar 4 2015 backbone_wo_insert.fa.fai reczko gfusers 96 Mar 4 2015 IonXpress_015_IMP3_Ab42Round2.aligned.bam.bam.bai reczko gfusers 1439078464 Mar 4 2015 IonXpress_015_IMP3_Ab42Round2.aligned.bam.bam reczko gfusers 96 Mar 4 2015 IonXpress_011_IMP2_A4VRound4.aligned.bam.bam.bai reczko gfusers 1025905008 Mar 4 2015 IonXpress_011_IMP2_A4VRound4.aligned.bam.bam reczko gfusers 96 Mar 4 2015 IonXpress_009_IMP1_4-5-6-7PeptideLinrary.aligned.bam.bam.bai reczko gfusers 1262909531 Mar 4 2015 IonXpress_009_IMP1_4-5-6-7PeptideLinrary.aligned.bam.bam reczko gfusers 24 Mar 4 2015 backbone_wo_insert.fasta.fai reczko gfusers 3985 Mar 4 2015 backbone_wo_insert.fasta reczko gfusers 3985 Mar 4 2015 backbone_wo_insert.fa reczko gfusers 3936 Mar 3 2015 backbone_wo_insert.fa2 reczko gfusers 3892291980 Mar 3 2015 IonXpress_015_IMP3_Ab42Round2.aligned.bam reczko gfusers 3367036631 Mar 3 2015 IonXpress_009_IMP1_4-5-6-7PeptideLinrary.aligned.bam reczko gfusers 988 Mar 3 2015 chippip.log reczko gfusers 4096 Mar 3 2015 bowtie2_006 reczko gfusers 2846189589 Mar 3 2015 IonXpress_011_IMP2_A4VRound4.aligned.bam reczko gfusers 1988 Mar 3 2015 chippip.sh reczko gfusers 1760841613 Mar 2 2015 IonXpress_015_IMP3_Ab42Round2.sam.gz reczko gfusers 1864878327 Mar 2 2015 IonXpress_009_IMP1_4-5-6-7PeptideLinrary.fq.gz reczko gfusers 4195819 Mar 2 2015 bb_wo_ins.rev.1.bt2 reczko gfusers 988 Mar 2 2015 bb_wo_ins.rev.2.bt2 reczko gfusers 4195819 Mar 2 2015 bb_wo_ins.1.bt2 reczko gfusers 988 Mar 2 2015 bb_wo_ins.2.bt2 reczko gfusers 17 Mar 2 2015 bb_wo_ins.3.bt2 reczko gfusers 981 Mar 2 2015 bb_wo_ins.4.bt2 reczko gfusers 1733723450 Mar 2 2015 IonXpress_011_IMP2_A4VRound4.fq.gz reczko gfusers 1473528528 Mar 2 2015 IonXpress_015_IMP3_Ab42Round2.fq.gz reczko gfusers 4156 Mar 2 2015 backbone-info.fa reczko gfusers 548 Mar 1 2015 samples.txt reczko gfusers 9068402593 Feb 24 2015 IonXpress_009_IMP1_4-5-6-7PeptideLinrary.bam reczko gfusers 7535071607 Feb 24 2015 IonXpress_015_IMP3_Ab42Round2.bam reczko gfusers 7810800049 Feb 22 2015 R_2015_02_20_12_55_13_user_ION-149-ITLab_DrMatis_150220_ITF4r_IMP1-3_.ITF4r-InputHNFaKO1.IonXpress_006.fastq reczko gfusers 8349656431 Feb 21 2015 IonXpress_011_IMP2_A4VRound4.bam -rw-rw-r-- 1 reczko gfusers 8349656431 Feb 21 2015 IonXpress_011_IMP2_A4VRound4.bam -rw-rw-rw- 1 reczko gfusers 7810800049 Feb 22 2015 R_2015_02_20_12_55_13_user_ION-149-ITLab_DrMatis_150220_ITF4r_IMP1-3_.ITF4r-InputHNFaKO1.IonXpress_006.fastq -rw-r--r-- 1 reczko gfusers 9068402593 Feb 24 2015 IonXpress_009_IMP1_4-5-6-7PeptideLinrary.bam -rw-r--r-- 1 reczko users 3034 Feb 29 2016 mails.txt -rw-r--r-- 1 reczko gfusers 548 Mar 1 2015 samples.txt -rw-rw-r-- 1 reczko gfusers 4156 Mar 2 2015 backbone-info.fa -rw-r--r-- 1 reczko gfusers 3936 Mar 3 2015 backbone_wo_insert.fa2 -rw-rw-r-- 1 reczko gfusers 43610 Mar 4 2015 coverage_all_first210bp.png -rwxr--r-- 1 reczko gfusers 1440 Mar 5 2015 get-ins1.sh r--r-- 1 reczko gfusers 215914802 Mar 6 2015 009_IMP1_4-5-6-7PeptideLinrary.ins.fa -rw-r--r-- 1 reczko gfusers 247062282 Mar 7 2015 009_IMP1_4-5-6-7PeptideLinrary.ins.fa.clust.clstr -rw-r--r-- 1 reczko gfusers 175702263 Mar 8 2015 009_IMP1_4-5-6-7PeptideLinrary.ins.fa.clust.clstr.size.fa drwxr-xr-x 2 reczko gfusers 4096 Mar 9 2015 coverage_009 -rw-rw-r-- 1 reczko gfusers 1166461 Mar 9 2015 insert_samples_total_reads_ge10.xlsx 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