file	condition	replicate_num	total_mass	norm_mass	internal_scale	external_scale
../bams/GM-tr-0h-a.bam2	GM-tr-0h-a	0	2.63056e+07	3.28203e+07	0.794915	1
../bams/GM-tr-0h-b.bam2	GM-tr-0h-a	1	3.75333e+07	3.28203e+07	1.05406	1
../bams/GM-tr-1h-a.bam2	GM-tr-0h-a	2	3.12043e+07	3.28203e+07	0.907657	1
../bams/GM-tr-1h-b.bam2	GM-tr-0h-a	3	3.54935e+07	3.28203e+07	1.14821	1
../bams/GM-tr-3h-a.bam2	GM-tr-0h-a	4	3.15459e+07	3.28203e+07	1.03905	1
../bams/GM-tr-3h-b.bam2	GM-tr-0h-a	5	3.25983e+07	3.28203e+07	1.15035	1
../bams/GM-untr-0h-a.bam2	GM-untr-0h-a	0	3.41473e+07	3.28203e+07	1.04939	1
../bams/GM-untr-0h-b.bam2	GM-untr-0h-a	1	3.78816e+07	3.28203e+07	1.01281	1

ID	bam	Barcode Name	Sample	Bases	>=Q20 Bases	Reads	Mean Read Length
GM-tr-0h-a.bam 	 /data/images/proton/run43/tophat_002b/sort_uniq.bam	IonXpressRNA_002	MF2-51	3324365716	2951049014	33659748	98 bp
GM-tr-0h-b.bam 	 /data/images/proton/run97/tophat_015/sort_uniq.bam	IonXpressRNA_015	MFR18r-51	6249320688	5193737374	45550561	137 bp 
GM-tr-1h-a.bam 	 /data/images/proton/run42/tophat_003b/sort_uniq.bam	IonXpressRNA_003	MF3-52	4262132596	3757551063	38965064	109 bp
GM-tr-1h-b.bam 	 /data/images/proton/run93/tophat_007/sort_uniq.bam	IonXpressRNA_007	MFR15-58	4779110542	3780821341	43422554	110 bp
GM-tr-3h-a.bam 	 /data/images/proton/run43/tophat_004b/sort_uniq.bam	IonXpressRNA_004	MF4-53	3919898291	3464187268	41668757	94 bp
GM-tr-3h-b.bam 	 /data/images/proton/run93/tophat_008/sort_uniq.bam	IonXpressRNA_008	MFR16-59	4391462316	3431668757	40611615	108 bp 
GM-untr-0h-a.bam 	 /data/images/proton/run42/tophat_001b/sort_uniq.bam	IonXpressRNA_001	MF1-50	4407705011	3886573248	44425278	99 bp
GM-untr-0h-b.bam 	 /data/images/proton/run97/tophat_009/sort_uniq.bam	IonXpressRNA_009	MFR17r-50	6191992705	5124995287	45193015	137 bp