MT Cufflinks exon 1 16720 0 + . gene_id "mask_1"; transcript_id "mask_id1/+"; MT Cufflinks exon 1 16720 0 - . gene_id "mask_1"; transcript_id "mask_id1/-"; GL000220.1 Cufflinks exon 95627 161949 0 + . gene_id "mask_2"; transcript_id "mask_id2/+"; GL000220.1 Cufflinks exon 95627 161949 0 - . gene_id "mask_2"; transcript_id "mask_id2/-";