/data/images/proton/run90/pairings/bams/GM-untr-0h.-merged.bam	/data/images/proton/run90/pairings/untr_VS_tr_wt/cuffdiff_GM-tr-0h-a_vs_GM-untr-0h-a/gene_exp.diff.minlen100.biotype.top100-GM-untr-0h.bed	"GM-untr-0h-TOP100untr-DOWN"
/data/images/proton/run90/pairings/bams/GM-tr-0h.-merged.bam	/data/images/proton/run90/pairings/untr_VS_tr_wt/cuffdiff_GM-tr-0h-a_vs_GM-untr-0h-a/gene_exp.diff.minlen100.biotype.top100-GM-untr-0h.bed	"GM-tr-0h-TOP100untr-DOWN"
/data/images/proton/run90/pairings/bams/GM-tr-1h.-merged.bam	/data/images/proton/run90/pairings/untr_VS_tr_wt/cuffdiff_GM-tr-0h-a_vs_GM-untr-0h-a/gene_exp.diff.minlen100.biotype.top100-GM-untr-0h.bed	"GM-tr-1h-TOP100untr-DOWN"
/data/images/proton/run90/pairings/bams/GM-tr-3h.-merged.bam	/data/images/proton/run90/pairings/untr_VS_tr_wt/cuffdiff_GM-tr-0h-a_vs_GM-untr-0h-a/gene_exp.diff.minlen100.biotype.top100-GM-untr-0h.bed	"GM-tr-3h-TOP100untr-DOWN"