Dear Martin, 

@ runs Ion 348-351 you will find Euaggelia's 11 Chipseq samples as well as Maroussa's 6 ChIPseq samples (ION 350-351).

Euaggelia, please advise Martin how to perform the analysis for Maroussa's samples.

Martin please note @ run Ion 351, wrong bc assignment:
ITC270-Mar7 is BC14
ITC271-Mar8 is BC15
ITC272-Mar-Imput7 is BC16
ITC273-Mar-Imput8 is BC17

Thank you,
Vaggelis


Dear Ioannis

at 
http://genomics-lab.fleming.gr/cgi-bin/hgTracks?db=hg38&hubUrl=http://genomics-lab.fleming.gr/fleming/ITlab/run351/hub.txt
you will find tracks for Maroussa's samples integrated in our UCSC genome browser mirror.
These tracks are sampled to smallest library (ITC268-Mar5  with  14704621 reads).
Sample            n_reads
ITC268-Mar5       14704621
ITC269-Mar6       16009596
ITC270-Mar7       17169750
ITC271-Mar8       17287813
ITC272-Mar-Input7 20610443
ITC273-Mar-Input8 24845923

At http://genomics-lab.fleming.gr/fleming/ITlab/run351
are the bam files for further analysis. Please let me know
if you need additional analysis.

Best wishes,
Martin


Dear Martin, 

@ runs Ion 348-351 you will find Euaggelia's 11 Chipseq samples as well as Maroussa's 6 ChIPseq samples (ION 350-351).

Euaggelia, please advise Martin how to perform the analysis for Maroussa's samples.

Martin please note @ run Ion 351, wrong bc assignment:
ITC270-Mar7 is BC14
ITC271-Mar8 is BC15
ITC272-Mar-Imput7 is BC16
ITC273-Mar-Imput8 is BC17

Thank you,
Vaggelis

Maroussa is hg38