reczko@max:/data/images/proton/run320$ ../chipSeq-pip5-mm10.sh reczko@max:/data/images/proton/run320$ ./chippip.sh &> chippip.log & reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run323/bowtie2_019/sort_uniq.bam ITC213-wt1Me3.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run323/bowtie2_020/sort_uniq.bam ITC214-wt1TCPMe3.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run323/bowtie2_021/sort_uniq.bam ITC215-wt3Me1.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run323/bowtie2_022/sort_uniq.bam ITC216-wt3TCPMe1.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run323/bowtie2_025/sort_uniq.bam ITC219-SET8ko2TCPINPUT.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run320/bowtie2_013/sort_uniq.bam ITC207-wt1TCPAIC.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run320/bowtie2_014/sort_uniq.bam ITC208-wt2TCPAIC.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run320/bowtie2_016/sort_uniq.bam ITC210-SET8ko1TCPAIC.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run320/bowtie2_017/sort_uniq.bam ITC211-SET8ko2TCPAIC.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run319/bowtie2_001/sort_uniq.bam ITC195-wt1B1.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run319/bowtie2_002/sort_uniq.bam ITC196-wt2B1.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run319/bowtie2_004/sort_uniq.bam ITC198-wt1TCPB1.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run319/bowtie2_005/sort_uniq.bam ITC199-wt2TCPB1.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run319/bowtie2_023/sort_uniq.bam ITC217-wt2INPUT.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run318/bowtie2_007/sort_uniq.bam ITC201-SET8ko1B1.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run318/bowtie2_008/sort_uniq.bam ITC202-SET8ko2B1.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run318/bowtie2_010/sort_uniq.bam ITC204-wt1AIC.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run318/bowtie2_011/sort_uniq.bam ITC205-wt2AIC.bam reczko@max:/data/images/proton/run323/www$ ln -s /data/images/proton/run318/bowtie2_024/sort_uniq.bam ITC218-wt2TCPINPUT.bam reczko@max:/data/images/proton/run323/www$ awk -f ../../link-bam-files-to-sample-ids1.awk ../samples.txt reczko@max:/data/images/proton/run323/www$ awk -f ../../link-bam-files-to-sample-ids1.awk ../../run320/samples.txt reczko@max:/data/images/proton/run323/www$ awk -f ../../link-bam-files-to-sample-ids1.awk ../../run319/samples.txt reczko@max:/data/images/proton/run323/www$ awk -f ../../link-bam-files-to-sample-ids1.awk ../../run318/samples.txt awk -f /data/images/proton/make-unstranded-sampled-mm10-tracks2.awk reads.txt > make-unstranded-sampled-mm10-tracks.sh