Dear Yiota,

your alignments and tracks are ready.
The tracks are at:
http://genomics-lab.fleming.gr/cgi-bin/hgTracks?db=mm10&hubUrl=http://genomics-lab.fleming.gr/fleming/ITlab/run293/hub.txt

The tracks are normalized to the second smallest sample:
ITC147-E15-2.bam wiht 14766791 reads.
The smallest sample
ITC149-P0-2.bam with 9389193 reads has not been normalized.

The sample sizes are as follows:
Sample 			n_reads
ITC146-E15-1.bam	20990269
ITC147-E15-2.bam	14766791
ITC148-P0-1.bam 	20852686
ITC149-P0-2.bam 	9389193
ITC150-P14-1.bam	16776880
ITC151-P14-2.bam	22482930
ITC152-P60-1.bam	17817439
ITC153-P60-2.bam	16917510

Bam files with the alignments (*.bam) are in the dir:
http://genomics-lab.fleming.gr/fleming/ITlab/run293

BW,
Martin