#!/bin/bash
# Sampling to 15000000 reads

/data/results/tools/proton/tophat2unstranded-sampled-bigwig1.sh ITC68-Set8KO1ME1.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.762926
/data/results/tools/proton/tophat2unstranded-sampled-bigwig1.sh ITC55-wt2Input.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.610388
/data/results/tools/proton/tophat2unstranded-sampled-bigwig1.sh ITC54-wt1Input.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.859198