#!/bin/bash
# Sampling to 15000000 reads

/data/results/tools/proton/tophat2unstranded-sampled-bigwig1.sh ITC62-Set8KO1POL2.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.717732
/data/results/tools/proton/tophat2unstranded-sampled-bigwig1.sh ITC63-Set8KO2POL2.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.799883
/data/results/tools/proton/tophat2unstranded-sampled-bigwig1.sh ITC61-wt2POL2.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.782648
/data/results/tools/proton/tophat2unstranded-sampled-bigwig1.sh ITC60-wt1POL2.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.680996