Dear Panagiotis

at
http://genomics-lab.fleming.gr/fleming/ITlab/run149
you'll find alignments for Panagiota's 12 FAIREseq
samples:

R_2015_02_11_12_25_40_user_ION-145-ITLab_150211_Faire_ITF1-4.ITF1-Input-E181.IonXpress_001.sort_uniq.bam -> /data/images/proton/run145/bowtie2_001/sort_uniq.bam
R_2015_02_11_12_25_40_user_ION-145-ITLab_150211_Faire_ITF1-4.ITF2-Input-P601.IonXpress_003.sort_uniq.bam -> /data/images/proton/run145/bowtie2_003/sort_uniq.bam
R_2015_02_11_12_25_40_user_ION-145-ITLab_150211_Faire_ITF1-4.ITF3-Input-CEBPaKO1.IonXpress_004.sort_uniq.bam -> /data/images/proton/run145/bowtie2_004/sort_uniq.bam
R_2015_02_18_12_16_37_user_ION-147-ITLab_150218_Faire_ITF5-7-9-11.ITF11-Faire-HNF4aKO1.IonXpress_015.sort_uniq.bam -> /data/images/proton/run147/bowtie2_015/sort_uniq.bam
R_2015_02_18_12_16_37_user_ION-147-ITLab_150218_Faire_ITF5-7-9-11.ITF5-Faire-E181.IonXpress_002.sort_uniq.bam -> /data/images/proton/run147/bowtie2_002/sort_uniq.bam
R_2015_02_18_12_16_37_user_ION-147-ITLab_150218_Faire_ITF5-7-9-11.ITF7-Faire-P601.IonXpress_005.sort_uniq.bam -> /data/images/proton/run147/bowtie2_005/sort_uniq.bam
R_2015_02_18_12_16_37_user_ION-147-ITLab_150218_Faire_ITF5-7-9-11.ITF9-Faire-CEBPaKO1.IonXpress_007.sort_uniq.bam -> /data/images/proton/run147/bowtie2_007/sort_uniq.bam
R_2015_02_19_12_20_02_user_ION-148-ITLab_150219_Faire_ITF6-8-10-12.ITF10-Faire-CEBPaKO2.IonXpress_013.sort_uniq.bam -> /data/images/proton/run148/bowtie2_013/sort_uniq.bam
R_2015_02_19_12_20_02_user_ION-148-ITLab_150219_Faire_ITF6-8-10-12.ITF12-Faire-HNFaKO2.IonXpress_014.sort_uniq.bam -> /data/images/proton/run148/bowtie2_014/sort_uniq.bam
R_2015_02_19_12_20_02_user_ION-148-ITLab_150219_Faire_ITF6-8-10-12.ITF6-Faire-E182.IonXpress_008.sort_uniq.bam -> /data/images/proton/run148/bowtie2_008/sort_uniq.bam
R_2015_02_19_12_20_02_user_ION-148-ITLab_150219_Faire_ITF6-8-10-12.ITF8-Faire-P602.IonXpress_009.sort_uniq.bam -> /data/images/proton/run148/bowtie2_009/sort_uniq.bam
R_2015_02_20_12_55_13_user_ION-149-ITLab_DrMatis_150220_ITF4r_IMP1-3_.ITF4r-InputHNFaKO1.IonXpress_006.sort_uniq.bam -> /data/images/proton/run149/bowtie2_006/sort_uniq.bam

BW,
Martin