PeakID (cmd=annotatePeaks.pl Atac153_MAPQ30_summits.bak.bed hg19) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type Atac153_MAPQ30_peak_4055 chr20 26190006 26190006 + 81.11253 NA promoter-TSS (NR_040095) promoter-TSS (NR_040095) -137 NR_040095 284801 Hs.370699 NR_040095 ENSG00000227195 MIR663AHG - MIR663A host gene (non-protein coding) ncRNA Atac153_MAPQ30_peak_3743 chr2 133026754 133026754 + 39.81639 NA Intergenic Intergenic -11212 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_5769 chr6 119558607 119558607 + 37.19290 NA intron (NM_005907, intron 6 of 12) intron (NM_005907, intron 6 of 12) -88249 NM_001100411 79632 Hs.443789 NM_024581 HPRD:09856 FAM184A C6orf60 family with sequence similarity 184, member A protein-coding Atac153_MAPQ30_peak_4054 chr20 26189072 26189072 + 36.25480 NA promoter-TSS (NR_030386) promoter-TSS (NR_030386) -158 NR_030386 724033 NR_030386 miRBase:MI0003672 MIR663A MIR663|MIRN663|hsa-mir-663|hsa-mir-663a microRNA 663a ncRNA Atac153_MAPQ30_peak_4221 chr21 9826036 9826036 + 33.00643 NA promoter-TSS (NR_037458) promoter-TSS (NR_037458) -167 NR_037458 100500815 NR_037458 miRBase:MI0016088 MIR3687-1 MIR3687 microRNA 3687-1 ncRNA Atac153_MAPQ30_peak_4222 chr21 9827082 9827082 + 32.79297 NA TTS (NR_037458) TTS (NR_037458) 879 NR_037458 100500815 NR_037458 miRBase:MI0016088 MIR3687-1 MIR3687 microRNA 3687-1 ncRNA Atac153_MAPQ30_peak_3739 chr2 133015232 133015232 + 32.76637 NA promoter-TSS (NR_031608) promoter-TSS (NR_031608) 310 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_3289 chr19 36066545 36066545 + 30.27412 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -11985 NM_000704 495 Hs.36992 NM_000704 HPRD:00668 ATP4A ATP6A ATPase, H+/K+ exchanging, alpha polypeptide protein-coding Atac153_MAPQ30_peak_1290 chr11 85195115 85195115 + 28.15464 NA intron (NM_001142699, intron 3 of 27) LSU-rRNA_Hsa|rRNA|rRNA 143199 NM_001142699 1740 Hs.367656 NM_001364 HPRD:04663 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs, large homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_301 chr1 91852867 91852867 + 27.58120 NA intron (NM_001017975, intron 4 of 38) LSU-rRNA_Hsa|rRNA|rRNA 17559 NM_001017975 164045 Hs.454818 NM_001017975 HPRD:13423 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_3748 chr2 133033285 133033285 + 27.48239 NA Intergenic Intergenic -17743 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_2825 chr17 41381805 41381805 + 26.06758 NA promoter-TSS (NR_047479) promoter-TSS (NR_047479) -743 NR_047479 100874261 Hs.546898 NR_047479 ENSG00000236383 LINC00854 TMEM106A-AS1 long intergenic non-protein coding RNA 854 ncRNA Atac153_MAPQ30_peak_3742 chr2 133023149 133023149 + 25.82534 NA Intergenic Intergenic -7607 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_2485 chr16 33959524 33959524 + 25.51736 NA Intergenic Intergenic 2979 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA Atac153_MAPQ30_peak_388 chr1 156186298 156186298 + 23.38366 NA intron (NM_001199664, intron 1 of 4) CpG 3519 NM_001199663 100527963 Hs.530479 NM_001199661 ENSG00000260238 PMF1-BGLAP PMF1 PMF1-BGLAP readthrough protein-coding Atac153_MAPQ30_peak_3746 chr2 133030625 133030625 + 21.04067 NA Intergenic L1PREC2|LINE|L1 -15083 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_3737 chr2 133011916 133011916 + 20.44286 NA intron (NR_027020, intron 1 of 4) intron (NR_027020, intron 1 of 4) 2737 NR_031608 100313824 NR_031608 miRBase:MI0006336 MIR663B MIRN663B microRNA 663b ncRNA Atac153_MAPQ30_peak_5325 chr5 71146907 71146907 + 18.80413 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA 131917 NM_004291 9607 Hs.1707 NM_004291 HPRD:04006 CARTPT CART CART prepropeptide protein-coding Atac153_MAPQ30_peak_1780 chr13 28033778 28033778 + 18.31494 NA Intergenic Intergenic -9039 NM_152912 219402 Hs.534582 NM_152912 HPRD:17609 MTIF3 IF3mt mitochondrial translational initiation factor 3 protein-coding Atac153_MAPQ30_peak_7153 chrX 108297766 108297766 + 18.23836 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA 317996 NR_110652 101928358 Hs.722300 NR_110652 LOC101928358 - uncharacterized LOC101928358 ncRNA Atac153_MAPQ30_peak_1468 chr12 20704430 20704430 + 17.46071 NA intron (NM_000921, intron 1 of 15) SSU-rRNA_Hsa|rRNA|rRNA -20368 NM_001244683 5139 Hs.386791 NM_000921 HPRD:00441 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A phosphodiesterase 3A, cGMP-inhibited protein-coding Atac153_MAPQ30_peak_4057 chr20 29653245 29653245 + 17.33816 NA Intergenic HERVL74-int|LTR|ERVL -15107 NR_045115 140678 Hs.653099 NR_045115 MLLT10P1 MLLT10L|bA348I14.3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 pseudogene 1 pseudo Atac153_MAPQ30_peak_2011 chr14 88237662 88237662 + 16.91673 NA Intergenic Intergenic 221953 NM_001201401 2581 Hs.513439 NM_000153 HPRD:06057 GALC - galactosylceramidase protein-coding Atac153_MAPQ30_peak_2757 chr17 21212348 21212348 + 15.93027 NA intron (NM_002756, intron 9 of 11) MLT1H1|LTR|ERVL-MaLR 21000 NM_002756 5606 Hs.514012 NM_002756 HPRD:03816 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding Atac153_MAPQ30_peak_7233 chrX 136520458 136520458 + 15.72059 NA Intergenic L1PA7|LINE|L1 -127888 NM_003413 7547 Hs.111227 NM_003413 HPRD:02225 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding Atac153_MAPQ30_peak_2413 chr16 14580952 14580952 + 15.51585 NA intron (NM_001134477, intron 21 of 23) intron (NM_001134477, intron 21 of 23) 143176 NM_002582 5073 Hs.253197 NM_002582 HPRD:07250 PARN DAN poly(A)-specific ribonuclease protein-coding Atac153_MAPQ30_peak_7301 chrY 13461065 13461065 + 14.64293 NA Intergenic BSR/Beta|Satellite|Satellite 1072324 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_3256 chr19 24184973 24184973 + 14.33009 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -31234 NM_001278661 9534 Hs.434406 NM_004876 HPRD:05304 ZNF254 BMZF-5|HD-ZNF1|ZNF539|ZNF91L zinc finger protein 254 protein-coding Atac153_MAPQ30_peak_3196 chr19 3902689 3902689 + 14.32564 NA intron (NM_033064, intron 3 of 12) intron (NM_033064, intron 3 of 12) 22071 NM_033064 85300 Hs.418055 NM_033064 HPRD:10491 ATCAY BNIP-H|CLAC ataxia, cerebellar, Cayman type protein-coding Atac153_MAPQ30_peak_7308 chrY 13488899 13488899 + 14.32564 NA Intergenic CpG 1044490 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_2365 chr16 5009334 5009334 + 14.32564 NA exon (NM_014692, exon 2 of 16) exon (NM_014692, exon 2 of 16) 1016 NM_014692 9717 Hs.512856 NM_014692 ENSG00000103184 SEC14L5 PRELID4B SEC14-like 5 (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_2483 chr16 33953208 33953208 + 14.18377 NA Intergenic AluSz|SINE|Alu 9295 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA Atac153_MAPQ30_peak_7300 chrY 10037863 10037863 + 14.03369 NA Intergenic Intergenic 289456 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 (non-protein coding) ncRNA Atac153_MAPQ30_peak_6389 chr8 58122547 58122547 + 13.91115 NA Intergenic MER50-int|LTR|ERV1 -8288 NR_038235 100507651 Hs.371831 NR_038235 ENSG00000253301 LOC100507651 - uncharacterized LOC100507651 ncRNA Atac153_MAPQ30_peak_3738 chr2 133012783 133012783 + 13.69828 NA intron (NR_027020, intron 1 of 4) SSU-rRNA_Hsa|rRNA|rRNA 1870 NR_031608 100313824 NR_031608 miRBase:MI0006336 MIR663B MIRN663B microRNA 663b ncRNA Atac153_MAPQ30_peak_2804 chr17 33478191 33478191 + 13.23506 NA intron (NM_001267052, intron 4 of 19) LSU-rRNA_Hsa|rRNA|rRNA 3355 NM_001267052 146862 Hs.379636 NM_173167 HPRD:10840 UNC45B CMYA4|SMUNC45|UNC45 unc-45 homolog B (C. elegans) protein-coding Atac153_MAPQ30_peak_2 chr1 569436 569436 + 13.19939 NA Intergenic Intergenic -1643 NR_106781 102465432 NR_106781 MIR6723 hsa-mir-6723 microRNA 6723 ncRNA Atac153_MAPQ30_peak_3744 chr2 133029282 133029282 + 13.13844 NA Intergenic GA-rich|Low_complexity|Low_complexity -13740 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_3271 chr19 31203754 31203754 + 13.08685 NA Intergenic Intergenic 340426 NM_014717 9745 Hs.378901 NM_014717 HPRD:15825 ZNF536 - zinc finger protein 536 protein-coding Atac153_MAPQ30_peak_7309 chrY 13489729 13489729 + 12.99165 NA Intergenic LSAU|Satellite|Satellite 1043660 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_7305 chrY 13476566 13476566 + 12.90349 NA Intergenic Intergenic 1056823 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_3895 chr2 230045557 230045557 + 12.79120 NA intron (NM_001100818, intron 1 of 2) LSU-rRNA_Hsa|rRNA|rRNA 90500 NM_017933 55022 Hs.745038 NM_017933 HPRD:07944 PID1 NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding Atac153_MAPQ30_peak_6586 chr9 8765665 8765665 + 12.60208 NA intron (NM_002839, intron 11 of 45) MLT1F1|LTR|ERVL-MaLR -31719 NM_130391 5789 Hs.446083 NM_002839 HPRD:03358 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase, receptor type, D protein-coding Atac153_MAPQ30_peak_363 chr1 142538643 142538643 + 12.39255 NA Intergenic (GAATG)n|Satellite|Satellite 174962 NR_046228 100874392 Hs.648245 NR_046228 ANKRD20A12P - ankyrin repeat domain 20 family, member A12, pseudogene pseudo Atac153_MAPQ30_peak_1271 chr11 76489822 76489822 + 11.85263 NA Intergenic L2c|LINE|L2 -3535 NM_001258210 25987 Hs.8361 NM_015516 HPRD:12152 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding Atac153_MAPQ30_peak_696 chr10 25996927 25996927 + 11.85263 NA intron (NR_108067, intron 3 of 4) MLT1D|LTR|ERVL-MaLR 56286 NR_108067 101929052 Hs.128298 NR_108067 LINC00836 - long intergenic non-protein coding RNA 836 ncRNA Atac153_MAPQ30_peak_6056 chr7 70843354 70843354 + 11.85263 NA intron (NM_022479, intron 2 of 10) intron (NM_022479, intron 2 of 10) -70598 NR_037477 100500836 NR_037477 miRBase:MI0016419 MIR3914-1 - microRNA 3914-1 ncRNA Atac153_MAPQ30_peak_6121 chr7 127757513 127757513 + 11.85263 NA Intergenic MSTD|LTR|ERVL-MaLR 35600 NR_030324 693178 NR_030324 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA Atac153_MAPQ30_peak_3415 chr2 11860718 11860718 + 11.85263 NA intron (NM_001261428, intron 2 of 21) L2c|LINE|L2 -3742 NM_001261427 23175 Hs.467740 NM_145693 HPRD:09271 LPIN1 PAP1 lipin 1 protein-coding Atac153_MAPQ30_peak_1640 chr12 111154380 111154380 + 11.75954 NA Intergenic AluSz|SINE|Alu 26403 NM_001244974 5501 Hs.79081 NM_002710 HPRD:08911 PPP1CC PP-1G|PP1C|PPP1G protein phosphatase 1, catalytic subunit, gamma isozyme protein-coding Atac153_MAPQ30_peak_3819 chr2 192870943 192870943 + 10.99470 NA intron (NM_016192, intron 5 of 9) intron (NM_016192, intron 5 of 9) -158937 NM_004657 8436 Hs.26530 NM_004657 HPRD:09470 SDPR CAVIN2|PS-p68|SDR|cavin-2 serum deprivation response protein-coding Atac153_MAPQ30_peak_7298 chrY 10019394 10019394 + 10.99470 NA Intergenic L1PREC2|LINE|L1 270987 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 (non-protein coding) ncRNA Atac153_MAPQ30_peak_1401 chr11 132091997 132091997 + 10.64987 NA intron (NM_001144059, intron 3 of 5) intron (NM_001144059, intron 3 of 5) -62199 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript (non-protein coding) ncRNA Atac153_MAPQ30_peak_249 chr1 47648615 47648615 + 10.64987 NA TTS (NM_005764) TTS (NM_005764) 3693 NR_047498 100874253 Hs.435758 NR_047498 ENSG00000224805 LINC00853 PDZK1IP1-AS1|ncRNA-a4 long intergenic non-protein coding RNA 853 ncRNA Atac153_MAPQ30_peak_7079 chrX 68138873 68138873 + 10.64987 NA Intergenic MLT1L|LTR|ERVL-MaLR 90033 NM_004429 1947 Hs.144700 NM_004429 HPRD:02072 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin-B1 protein-coding Atac153_MAPQ30_peak_105 chr1 17773889 17773889 + 10.64987 NA Intergenic AluSx1|SINE|Alu -7639 NM_018715 55920 Hs.380857 NM_018715 HPRD:18171 RCC2 TD-60 regulator of chromosome condensation 2 protein-coding Atac153_MAPQ30_peak_942 chr10 123369069 123369069 + 10.64987 NA Intergenic AluSg|SINE|Alu -11097 NR_073009 2263 Hs.533683 NM_000141 HPRD:01492 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding Atac153_MAPQ30_peak_2677 chr17 5576264 5576264 + 10.64987 NA Intergenic Intergenic -88432 NM_033007 22861 Hs.652273 NM_014922 HPRD:07364 NLRP1 CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family, pyrin domain containing 1 protein-coding Atac153_MAPQ30_peak_6259 chr8 5032297 5032297 + 10.64987 NA Intergenic Intergenic -179969 NM_033225 64478 Hs.571466 NM_033225 HPRD:10523 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding Atac153_MAPQ30_peak_2802 chr17 32786544 32786544 + 10.64987 NA Intergenic Intergenic -96292 NM_002981 6346 Hs.72918 NM_002981 HPRD:01654 CCL1 I-309|P500|SCYA1|SISe|TCA3 chemokine (C-C motif) ligand 1 protein-coding Atac153_MAPQ30_peak_4401 chr22 31671193 31671193 + 10.64987 NA exon (NM_005569, exon 15 of 16) exon (NM_005569, exon 15 of 16) 17327 NM_001135911 113791 Hs.26670 NM_052880 HPRD:17518 PIK3IP1 HGFL|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding Atac153_MAPQ30_peak_5668 chr6 39798113 39798113 + 10.64987 NA intron (NM_015345, intron 1 of 24) intron (NM_015345, intron 1 of 24) 37340 NM_015345 23500 Hs.357128 NM_015345 HPRD:09434 DAAM2 dJ90A20A.1 dishevelled associated activator of morphogenesis 2 protein-coding Atac153_MAPQ30_peak_360 chr1 121485043 121485043 + 9.86852 NA Intergenic ALR/Alpha|Satellite|centr 224133 NR_003955 647121 Hs.697682 NR_003955 EMBP1 - embigin pseudogene 1 pseudo Atac153_MAPQ30_peak_2486 chr16 33963781 33963781 + 9.69210 NA Intergenic SSU-rRNA_Hsa|rRNA|rRNA -1278 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA Atac153_MAPQ30_peak_2827 chr17 41400468 41400468 + 9.65795 NA Intergenic Intergenic -19406 NR_047479 100874261 Hs.546898 NR_047479 ENSG00000236383 LINC00854 TMEM106A-AS1 long intergenic non-protein coding RNA 854 ncRNA Atac153_MAPQ30_peak_5756 chr6 110042402 110042402 + 9.48005 NA intron (NM_014845, intron 3 of 22) intron (NM_014845, intron 3 of 22) 29978 NM_014845 9896 Hs.529959 NM_014845 HPRD:11073 FIG4 ALS11|CMT4J|KIAA0274|SAC3|YVS|dJ249I4.1 FIG4 phosphoinositide 5-phosphatase protein-coding Atac153_MAPQ30_peak_1750 chr12 133184930 133184930 + 9.48005 NA intron (NM_001195520, intron 1 of 5) intron (NM_001195520, intron 1 of 5) 2107 NM_001195520 100507055 Hs.282811 NM_001195520 LRCOL1 - leucine rich colipase-like 1 protein-coding Atac153_MAPQ30_peak_1417 chr11 134533482 134533482 + 9.48005 NA Intergenic MLT1A0|LTR|ERVL-MaLR 227106 NR_033852 283177 Hs.504390 NR_033852 LOC283177 - uncharacterized LOC283177 ncRNA Atac153_MAPQ30_peak_6313 chr8 22586435 22586435 + 9.48005 NA intron (NM_144962, intron 4 of 6) intron (NM_144962, intron 4 of 6) -35620 NM_004430 1960 Hs.534313 NM_004430 HPRD:03881 EGR3 EGR-3|PILOT early growth response 3 protein-coding Atac153_MAPQ30_peak_1585 chr12 95171711 95171711 + 9.48005 NA Intergenic Intergenic -56463 NR_030171 574449 NR_030171 miRBase:MI0003131 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA Atac153_MAPQ30_peak_6862 chr9 139080017 139080017 + 9.48005 NA Intergenic AluJr|SINE|Alu 14987 NM_014564 8022 Hs.148427 NM_014564 HPRD:02783 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding Atac153_MAPQ30_peak_2269 chr15 78504268 78504268 + 9.48005 NA intron (NM_015162, intron 1 of 13) intron (NM_015162, intron 1 of 13) 22781 NM_015162 23205 Hs.655760 NM_015162 ACSBG1 BG|BG1|BGM|GR-LACS|LPD acyl-CoA synthetase bubblegum family member 1 protein-coding Atac153_MAPQ30_peak_4318 chr21 45913903 45913903 + 9.48005 NA Intergenic LTR23|LTR|ERV1 -12024 NR_103707 54082 Hs.570444 NR_103707 TSPEAR-AS1 C21orf31 TSPEAR antisense RNA 1 ncRNA Atac153_MAPQ30_peak_96 chr1 16573587 16573587 + 9.48005 NA Intergenic Intergenic -9928 NM_030907 79363 Hs.546430 NM_030907 HPRD:14399 RSG1 C1orf89 REM2 and RAB-like small GTPase 1 protein-coding Atac153_MAPQ30_peak_979 chr10 128375191 128375191 + 9.48005 NA Intergenic Intergenic -165181 NM_001004298 118611 Hs.587663 NM_001004298 HPRD:16587 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding Atac153_MAPQ30_peak_6016 chr7 52433563 52433563 + 9.48005 NA Intergenic Intergenic -669786 NM_182595 285877 Hs.381970 NM_182595 HPRD:13212 POM121L12 - POM121 transmembrane nucleoporin-like 12 protein-coding Atac153_MAPQ30_peak_4849 chr3 134123581 134123581 + 9.48005 NA Intergenic Intergenic -29322 NM_001278683 51421 Hs.426312 NM_016201 HPRD:16485 AMOTL2 LCCP angiomotin like 2 protein-coding Atac153_MAPQ30_peak_1494 chr12 38543866 38543866 + 9.48005 NA Intergenic FordPrefect|DNA|hAT-Tip100 -166691 NM_001013620 144245 Hs.259305 NM_001013620 ALG10B ALG10|KCR1 ALG10B, alpha-1,2-glucosyltransferase protein-coding Atac153_MAPQ30_peak_2981 chr18 109315 109315 + 9.45124 NA non-coding (NR_033770, exon 1 of 5) non-coding (NR_033770, exon 1 of 5) 250 NR_033770 727758 Hs.585843 NR_033770 ROCK1P1 - Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1 pseudo Atac153_MAPQ30_peak_1776 chr13 26801243 26801243 + 9.43903 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -4735 NM_005977 6049 Hs.136885 NM_005977 HPRD:05027 RNF6 - ring finger protein (C3H2C3 type) 6 protein-coding Atac153_MAPQ30_peak_6169 chr7 139055519 139055519 + 9.11683 NA intron (NM_016019, intron 1 of 9) intron (NM_016019, intron 1 of 9) 10927 NM_001270643 51631 Hs.731488 NM_016019 HPRD:17456 LUC7L2 CGI-74|LUC7B2 LUC7-like 2 (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_6585 chr9 7375537 7375537 + 9.05131 NA Intergenic Intergenic 424262 NM_033428 90871 Hs.7517 NM_033428 HPRD:12939 TMEM261 C9orf123 transmembrane protein 261 protein-coding Atac153_MAPQ30_peak_361 chr1 142535839 142535839 + 8.94291 NA Intergenic (GAATG)n|Satellite|Satellite 177766 NR_046228 100874392 Hs.648245 NR_046228 ANKRD20A12P - ankyrin repeat domain 20 family, member A12, pseudogene pseudo Atac153_MAPQ30_peak_4331 chr22 17416014 17416014 + 8.90793 NA Intergenic Intergenic 73098 NM_001037814 128954 Hs.434113 NM_001037814 ENSG00000215568 GAB4 - GRB2-associated binding protein family, member 4 protein-coding Atac153_MAPQ30_peak_2678 chr17 5758751 5758751 + 8.90793 NA intron (NR_040000, intron 2 of 3) MER68|LTR|ERVL 83197 NR_040000 339166 Hs.736088 NR_040000 ENSG00000179314 LOC339166 - uncharacterized LOC339166 ncRNA Atac153_MAPQ30_peak_2173 chr15 58712304 58712304 + 8.80948 NA Intergenic Intergenic -11871 NM_000236 3990 Hs.654472 NM_000236 HPRD:01058 LIPC HDLCQ12|HL|HTGL|LIPH lipase, hepatic protein-coding Atac153_MAPQ30_peak_6518 chr8 139302206 139302206 + 8.37457 NA intron (NM_015912, intron 3 of 19) intron (NM_015912, intron 3 of 19) 206859 NM_015912 51059 Hs.126024 NM_015912 HPRD:14230 FAM135B C8ORFK32 family with sequence similarity 135, member B protein-coding Atac153_MAPQ30_peak_5144 chr4 124528266 124528266 + 8.35468 NA Intergenic Intergenic -45674 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA Atac153_MAPQ30_peak_6238 chr8 756214 756214 + 8.35468 NA intron (NR_073397, intron 1 of 3) MLT1K|LTR|ERVL-MaLR 68609 NR_073397 619343 Hs.667939 NR_073397 ERICH1-AS1 C8orf68 ERICH1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_15 chr1 2907063 2907063 + 8.35468 NA Intergenic Intergenic -30983 NM_080431 140625 Hs.236635 NM_080431 HPRD:12254 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin-related protein T2 protein-coding Atac153_MAPQ30_peak_6912 chrX 13646320 13646320 + 8.35468 NA intron (NM_001167890, intron 11 of 11) MER77|LTR|ERVL -24905 NM_001297564 170082 Hs.222855 NM_152634 ENSG00000176896 TCEANC - transcription elongation factor A (SII) N-terminal and central domain containing protein-coding Atac153_MAPQ30_peak_7192 chrX 122653722 122653722 + 8.35468 NA Intergenic LTR33A|LTR|ERVL 213182 NM_001081550 57187 Hs.149991 NM_020449 HPRD:02317 THOC2 CXorf3|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding Atac153_MAPQ30_peak_3863 chr2 217449535 217449535 + 8.35468 NA Intergenic Intergenic 22126 NR_110392 101928232 Hs.694592 NR_110392 ENSG00000224391 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA Atac153_MAPQ30_peak_1272 chr11 76750036 76750036 + 8.35468 NA intron (NM_138706, intron 1 of 3) MIRb|SINE|MIR 4651 NM_138706 192134 Hs.352622 NM_138706 HPRD:16534 B3GNT6 B3Gn-T6|BGnT-6|beta-1,3-Gn-T6|beta3Gn-T6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase) protein-coding Atac153_MAPQ30_peak_3300 chr19 41035493 41035493 + 8.35468 NA promoter-TSS (NM_025213) promoter-TSS (NM_025213) -902 NM_025213 57731 Hs.32706 NM_020971 HPRD:09372 SPTBN4 QV|SPNB4|SPTBN3 spectrin, beta, non-erythrocytic 4 protein-coding Atac153_MAPQ30_peak_124 chr1 20645839 20645839 + 8.35468 NA intron (NM_001039500, intron 6 of 21) intron (NM_001039500, intron 6 of 21) 28427 NM_001039500 127731 Hs.205178 NM_144623 HPRD:08732 VWA5B1 - von Willebrand factor A domain containing 5B1 protein-coding Atac153_MAPQ30_peak_6810 chr9 129502687 129502687 + 8.35468 NA Intergenic ERVL-E-int|LTR|ERVL -64598 NM_014007 23099 Hs.355581 NM_014007 HPRD:08346 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding Atac153_MAPQ30_peak_4340 chr22 20961120 20961120 + 8.35468 NA Intergenic Intergenic -82723 NR_024592 266697 Hs.558711 NR_024592 POM121L4P - POM121 transmembrane nucleoporin-like 4 pseudogene pseudo Atac153_MAPQ30_peak_3092 chr18 46277707 46277707 + 8.35468 NA intron (NM_014772, intron 7 of 11) intron (NM_014772, intron 7 of 11) 80736 NR_039897 100616366 NR_039897 MIR4743 - microRNA 4743 ncRNA Atac153_MAPQ30_peak_3925 chr2 237255361 237255361 + 8.35468 NA intron (NM_001270585, intron 15 of 18) MER50|LTR|ERV1 -82373 NM_212556 401036 Hs.639909 NM_212556 HPRD:16514 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding Atac153_MAPQ30_peak_3411 chr2 11265945 11265945 + 8.35468 NA intron (NR_040080, intron 3 of 8) AluSx|SINE|Alu 6357 NR_040080 285150 Hs.329841 NM_182586 HPRD:08158 FLJ33534 - uncharacterized LOC285150 ncRNA Atac153_MAPQ30_peak_7021 chrX 48612075 48612075 + 8.35468 NA Intergenic Intergenic -8079 NM_001080489 392465 Hs.437539 NM_001080489 ENSG00000171433 GLOD5 - glyoxalase domain containing 5 protein-coding Atac153_MAPQ30_peak_2773 chr17 22261609 22261609 + 8.35468 NA Intergenic ALR/Alpha|Satellite|centr 239172 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2-like 1 protein-coding Atac153_MAPQ30_peak_5546 chr5 180166568 180166568 + 8.35468 NA exon (NM_001001657, exon 1 of 1) exon (NM_001001657, exon 1 of 1) 490 NM_001001657 134083 Hs.554719 NM_001001657 HPRD:17716 OR2Y1 OR5-2 olfactory receptor, family 2, subfamily Y, member 1 protein-coding Atac153_MAPQ30_peak_1713 chr12 128230702 128230702 + 8.35468 NA Intergenic Intergenic -109690 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LOC101927637 - uncharacterized LOC101927637 ncRNA Atac153_MAPQ30_peak_1940 chr14 61644688 61644688 + 8.35468 NA Intergenic Intergenic 103842 NM_001017970 161291 Hs.146180 NM_001017970 HPRD:18567 TMEM30B CDC50B transmembrane protein 30B protein-coding Atac153_MAPQ30_peak_5265 chr5 11009521 11009521 + 8.35468 NA intron (NM_001288717, intron 17 of 20) intron (NM_001288717, intron 17 of 20) -248134 NM_001291963 1611 Hs.75189 NM_004394 HPRD:02977 DAP - death-associated protein protein-coding Atac153_MAPQ30_peak_6051 chr7 69331703 69331703 + 8.35468 NA intron (NM_001127231, intron 1 of 17) intron (NM_001127231, intron 1 of 17) 267798 NM_001127231 26053 Hs.21631 NM_015570 HPRD:06276 AUTS2 FBRSL2|MRD26 autism susceptibility candidate 2 protein-coding Atac153_MAPQ30_peak_3977 chr20 2421300 2421300 + 8.35468 NA Intergenic MamRep1527|LTR|LTR 22393 NR_003684 100113378 NR_003684 SNORD119 - small nucleolar RNA, C/D box 119 snoRNA Atac153_MAPQ30_peak_3334 chr19 49377739 49377739 + 8.35468 NA exon (NM_014330, exon 2 of 3) exon (NM_014330, exon 2 of 3) 2090 NM_014330 23645 Hs.631593 NM_014330 HPRD:06572 PPP1R15A GADD34 protein phosphatase 1, regulatory subunit 15A protein-coding Atac153_MAPQ30_peak_6480 chr8 128900795 128900795 + 8.35468 NA Intergenic MLT1D|LTR|ERVL-MaLR -2079 NR_003367 5820 Hs.133107 NR_003367 ENSG00000249859 PVT1 LINC00079|NCRNA00079 Pvt1 oncogene (non-protein coding) ncRNA Atac153_MAPQ30_peak_5430 chr5 140811596 140811596 + 8.35468 NA exon (NM_003735, exon 1 of 4) exon (NM_003735, exon 1 of 4) 1438 NM_003735 26025 Hs.368160 NM_003735 HPRD:07538 PCDHGA12 CDH21|FIB3|PCDH-GAMMA-A12 protocadherin gamma subfamily A, 12 protein-coding Atac153_MAPQ30_peak_7083 chrX 68332965 68332965 + 8.35468 NA Intergenic L3|LINE|CR1 52400 NM_145119 64219 Hs.522679 NM_022368 HPRD:02335 PJA1 PRAJA1|RNF70 praja ring finger 1, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_2949 chr17 76662408 76662408 + 8.35468 NA Intergenic LTR44|LTR|ERV1 -34269 NR_110849 101928710 Hs.464224 NR_110848 ENSG00000267123 LOC101928710 - uncharacterized LOC101928710 ncRNA Atac153_MAPQ30_peak_3960 chr2 242072164 242072164 + 8.35468 NA intron (NM_015148, intron 9 of 17) MIR|SINE|MIR 16755 NM_001252122 23178 Hs.397891 NM_015148 HPRD:06328 PASK PASKIN|STK37 PAS domain containing serine/threonine kinase protein-coding Atac153_MAPQ30_peak_4408 chr22 33140017 33140017 + 8.35468 NA intron (NM_001135774, intron 6 of 13) intron (NM_001135774, intron 6 of 13) -56785 NM_000362 7078 Hs.644633 NM_000362 HPRD:01785 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding Atac153_MAPQ30_peak_2488 chr16 33965582 33965582 + 8.35468 NA Intergenic CpG -3079 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA Atac153_MAPQ30_peak_1475 chr12 26422908 26422908 + 8.35468 NA Intergenic Intergenic 74402 NM_005086 8082 Hs.183428 NM_005086 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding Atac153_MAPQ30_peak_3501 chr2 37996777 37996777 + 8.35468 NA Intergenic Intergenic 60077 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA Atac153_MAPQ30_peak_4249 chr21 34421315 34421315 + 8.35468 NA Intergenic Intergenic -8820 NR_104056 101930746 Hs.580934 NR_104056 LINC00945 - long intergenic non-protein coding RNA 945 ncRNA Atac153_MAPQ30_peak_5709 chr6 57184343 57184343 + 8.35468 NA intron (NM_000947, intron 2 of 14) L2|LINE|L2 1928 NM_001282487 5558 Hs.654580 NM_000947 PRIM2 PRIM2A|p58 primase, DNA, polypeptide 2 (58kDa) protein-coding Atac153_MAPQ30_peak_1170 chr11 45408828 45408828 + 8.35468 NA non-coding (NR_122071, exon 4 of 5) non-coding (NR_122071, exon 4 of 5) 15880 NR_122071 399886 Hs.559970 NR_122071 HPRD:13453 LOC399886 - uncharacterized LOC399886 ncRNA Atac153_MAPQ30_peak_6553 chr8 143438202 143438202 + 8.35468 NA intron (NM_001291931, intron 1 of 10) MIR|SINE|MIR 46408 NM_145003 203062 Hs.370931 NM_145003 HPRD:08708 TSNARE1 - t-SNARE domain containing 1 protein-coding Atac153_MAPQ30_peak_4192 chr20 58672376 58672376 + 8.35468 NA intron (NR_109917, intron 2 of 4) intron (NR_109917, intron 2 of 4) 9635 NR_109918 729296 Hs.534781 NR_109916 LOC729296 - uncharacterized LOC729296 ncRNA Atac153_MAPQ30_peak_5684 chr6 42259889 42259889 + 8.35468 NA intron (NM_033502, intron 4 of 17) intron (NM_033502, intron 4 of 17) -74256 NM_018141 55173 Hs.380887 NM_018141 HPRD:14775 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding Atac153_MAPQ30_peak_726 chr10 44457256 44457256 + 8.35468 NA intron (NR_033846, intron 5 of 7) intron (NR_033846, intron 5 of 7) 52504 NR_033846 283033 Hs.730228 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA Atac153_MAPQ30_peak_5745 chr6 107384098 107384098 + 8.35468 NA Intergenic Intergenic 34722 NM_001142468 51250 Hs.486084 NM_016487 HPRD:12873 C6orf203 PRED31 chromosome 6 open reading frame 203 protein-coding Atac153_MAPQ30_peak_3209 chr19 7574367 7574367 + 8.35468 NA Intergenic Intergenic -6637 NM_018083 140467 Hs.133475 NM_018083 HPRD:10331 ZNF358 ZFEND zinc finger protein 358 protein-coding Atac153_MAPQ30_peak_4150 chr20 49307122 49307122 + 8.35468 NA intron (NM_001290268, intron 1 of 21) intron (NM_001290268, intron 1 of 21) 945 NR_110890 140876 Hs.372578 NM_080829 HPRD:12757 FAM65C C20orf175|C20orf176|dJ530I15.2|dJ530I15.3 family with sequence similarity 65, member C protein-coding Atac153_MAPQ30_peak_5071 chr4 46296949 46296949 + 8.35468 NA intron (NM_001286827, intron 7 of 9) HERVL-int|LTR|ERVL 94447 NM_001114175 2555 Hs.116250 NM_000807 HPRD:11747 GABRA2 - gamma-aminobutyric acid (GABA) A receptor, alpha 2 protein-coding Atac153_MAPQ30_peak_956 chr10 125602358 125602358 + 8.35468 NA intron (NM_198148, intron 3 of 13) L2c|LINE|L2 49142 NM_198148 119587 Hs.656887 NM_198148 HPRD:08517 CPXM2 CPX2|UNQ676 carboxypeptidase X (M14 family), member 2 protein-coding Atac153_MAPQ30_peak_3613 chr2 91803044 91803044 + 8.35036 NA Intergenic L2c|LINE|L2 44931 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_470 chr1 201343682 201343682 + 8.35036 NA intron (NM_001276347, intron 1 of 15) MIRb|SINE|MIR 3146 NM_001276346 7139 Hs.533613 NM_000364 HPRD:01844 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T type 2 (cardiac) protein-coding Atac153_MAPQ30_peak_869 chr10 98561328 98561328 + 8.34822 NA Intergenic Intergenic -30689 NM_001170765 84458 Hs.745068 NM_032440 HPRD:07609 LCOR MLR2 ligand dependent nuclear receptor corepressor protein-coding Atac153_MAPQ30_peak_1575 chr12 90448028 90448028 + 8.34822 NA Intergenic (TATG)n|Simple_repeat|Simple_repeat 345296 NR_028138 338758 Hs.601766 NR_028138 ENSG00000271614 LINC00936 - long intergenic non-protein coding RNA 936 ncRNA Atac153_MAPQ30_peak_3837 chr2 205223953 205223953 + 8.23104 NA Intergenic Intergenic -186563 NM_152526 117583 Hs.657382 NM_057177 HPRD:09795 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3LC|PAR3beta|Par3Lb par-3 family cell polarity regulator beta protein-coding Atac153_MAPQ30_peak_5741 chr6 100016662 100016662 + 8.23104 NA promoter-TSS (NM_005190) promoter-TSS (NM_005190) 28 NM_005190 892 Hs.430646 NM_005190 HPRD:00456 CCNC CycC cyclin C protein-coding Atac153_MAPQ30_peak_2329 chr15 98675352 98675352 + 8.23104 NA Intergenic Intergenic -43370 NR_120325 101927332 NR_120325 LOC101927332 - uncharacterized LOC101927332 ncRNA Atac153_MAPQ30_peak_1800 chr13 40680686 40680686 + 8.23104 NA Intergenic Intergenic -75260 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA Atac153_MAPQ30_peak_2112 chr15 28065538 28065538 + 7.93759 NA intron (NM_001300984, intron 22 of 22) L1MC3|LINE|L1 278920 NM_001300984 4948 Hs.654411 NM_000275 HPRD:01945 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 oculocutaneous albinism II protein-coding Atac153_MAPQ30_peak_6388 chr8 58118355 58118355 + 7.91468 NA Intergenic Intergenic -12480 NR_038235 100507651 Hs.371831 NR_038235 ENSG00000253301 LOC100507651 - uncharacterized LOC100507651 ncRNA Atac153_MAPQ30_peak_6605 chr9 29149792 29149792 + 7.91468 NA intron (NM_001258282, intron 1 of 6) L1PA16|LINE|L1 63206 NM_001258282 158038 Hs.662661 NM_152570 HPRD:08715 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding Atac153_MAPQ30_peak_5320 chr5 65951522 65951522 + 7.88976 NA intron (NM_198828, intron 1 of 5) intron (NM_198828, intron 1 of 5) 59346 NM_198828 375449 Hs.595458 NM_015183 HPRD:14195 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding Atac153_MAPQ30_peak_2845 chr17 45266566 45266566 + 7.88976 NA 5' UTR (NM_001293091, exon 1 of 18) 5' UTR (NM_001293091, exon 1 of 18) 112 NM_001293091 996 Hs.463295 NM_001256 HPRD:00304 CDC27 ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2 cell division cycle 27 protein-coding Atac153_MAPQ30_peak_5372 chr5 111057082 111057082 + 7.64953 NA intron (NR_040093, intron 2 of 6) intron (NR_040093, intron 2 of 6) 34866 NM_001142483 9315 Hs.36053 NM_004772 HPRD:09545 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding Atac153_MAPQ30_peak_1859 chr13 103669920 103669920 + 7.64953 NA Intergenic Intergenic 49276 NM_000452 6555 Hs.194783 NM_000452 HPRD:03189 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 (sodium/bile acid cotransporter), member 2 protein-coding Atac153_MAPQ30_peak_5307 chr5 53922536 53922536 + 7.53905 NA Intergenic MER20|DNA|hAT-Charlie 76616 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA Atac153_MAPQ30_peak_1325 chr11 114005714 114005714 + 7.30142 NA intron (NM_001018011, intron 2 of 6) intron (NM_001018011, intron 2 of 6) 74426 NM_001018011 7704 Hs.591945 NM_006006 HPRD:11762 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding Atac153_MAPQ30_peak_6100 chr7 105314456 105314456 + 7.28788 NA intron (NM_020725, intron 3 of 11) intron (NM_020725, intron 3 of 11) 5153 NM_138495 222255 Hs.745056 NM_020725 HPRD:12508 ATXN7L1 ATXN7L4 ataxin 7-like 1 protein-coding Atac153_MAPQ30_peak_953 chr10 125458130 125458130 + 7.28788 NA Intergenic MIR|SINE|MIR 32259 NM_153442 2849 Hs.12751 NM_153442 GPR26 - G protein-coupled receptor 26 protein-coding Atac153_MAPQ30_peak_6777 chr9 119816761 119816761 + 7.28788 NA intron (NM_014010, intron 4 of 21) L2b|LINE|L2 126719 NR_003708 100124538 Hs.693445 NR_003708 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA Atac153_MAPQ30_peak_6785 chr9 122919275 122919275 + 7.28788 NA Intergenic Intergenic 88053 NR_029604 406939 NR_029604 miRBase:MI0000262 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA Atac153_MAPQ30_peak_5457 chr5 153515267 153515267 + 7.28788 NA Intergenic Intergenic -55028 NM_198321 55568 Hs.631797 NM_017540 HPRD:12157 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding Atac153_MAPQ30_peak_6327 chr8 27319072 27319072 + 7.28788 NA 3' UTR (NM_001282455, exon 7 of 7) 3' UTR (NM_001282455, exon 7 of 7) 17741 NM_000742 1135 Hs.57718 NM_000742 HPRD:00332 CHRNA2 - cholinergic receptor, nicotinic, alpha 2 (neuronal) protein-coding Atac153_MAPQ30_peak_7115 chrX 81637792 81637792 + 7.28788 NA Intergenic L1MA4A|LINE|L1 -1125477 NM_000307 5456 Hs.2229 NM_000307 HPRD:02076 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding Atac153_MAPQ30_peak_6386 chr8 56835922 56835922 + 7.28788 NA intron (NM_001111097, intron 1 of 12) intron (NM_001111097, intron 1 of 12) 43536 NM_002350 4067 Hs.491767 NM_002350 HPRD:01301 LYN JTK8|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding Atac153_MAPQ30_peak_5499 chr5 171994148 171994148 + 7.28788 NA Intergenic Intergenic -74128 NM_001142651 54492 Hs.91521 NM_001142651 ENSG00000214357 NEURL1B NEURL3|hNeur2|neur2 neuralized E3 ubiquitin protein ligase 1B protein-coding Atac153_MAPQ30_peak_4097 chr20 39513432 39513432 + 7.28788 NA Intergenic MIRb|SINE|MIR -144030 NM_003286 7150 Hs.472737 NM_003286 HPRD:00535 TOP1 TOPI topoisomerase (DNA) I protein-coding Atac153_MAPQ30_peak_3361 chr19 58757389 58757389 + 7.28788 NA intron (NM_014480, intron 4 of 6) MLT1A|LTR|ERVL-MaLR 17319 NM_014480 27300 Hs.438994 NM_014480 HPRD:15830 ZNF544 - zinc finger protein 544 protein-coding Atac153_MAPQ30_peak_800 chr10 75277120 75277120 + 7.28788 NA exon (NM_152586, exon 18 of 22) exon (NM_152586, exon 18 of 22) -21338 NM_001289968 5532 Hs.500067 NM_021132 HPRD:00235 PPP3CB CALNA2|CALNB|CNA2|PP2Bbeta protein phosphatase 3, catalytic subunit, beta isozyme protein-coding Atac153_MAPQ30_peak_6894 chrX 4256135 4256135 + 7.28788 NA Intergenic Intergenic 295478 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA Atac153_MAPQ30_peak_4114 chr20 42168400 42168400 + 7.28788 NA intron (NM_032107, intron 19 of 21) intron (NM_032107, intron 19 of 21) -19235 NM_170693 10110 Hs.300863 NM_016276 HPRD:06348 SGK2 H-SGK2|dJ138B7.2 serum/glucocorticoid regulated kinase 2 protein-coding Atac153_MAPQ30_peak_5359 chr5 95193549 95193549 + 7.28788 NA intron (NR_026936, intron 2 of 2) MIR|SINE|MIR 5613 NR_026936 202299 Hs.8373 NM_175616 HPRD:16896 C5orf27 FIS chromosome 5 open reading frame 27 ncRNA Atac153_MAPQ30_peak_1252 chr11 70827863 70827863 + 7.28788 NA intron (NM_012309, intron 3 of 22) MSTB|LTR|ERVL-MaLR 107979 NM_012309 22941 Hs.268726 NM_012309 HPRD:04479 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding Atac153_MAPQ30_peak_885 chr10 104373330 104373330 + 7.28788 NA intron (NM_016169, intron 8 of 11) intron (NM_016169, intron 8 of 11) -30922 NM_030912 81603 Hs.336810 NM_030912 HPRD:06934 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding Atac153_MAPQ30_peak_3216 chr19 9691997 9691997 + 7.28788 NA intron (NM_001008727, intron 1 of 3) LTR10D|LTR|ERV1 3212 NM_001008727 7675 Hs.501537 NM_001008727 HPRD:15952 ZNF121 D19S204|ZHC32|ZNF20 zinc finger protein 121 protein-coding Atac153_MAPQ30_peak_6013 chr7 51393336 51393336 + 7.28788 NA Intergenic Intergenic -8821 NM_001287436 23242 Hs.99141 NM_015198 HPRD:10843 COBL - cordon-bleu WH2 repeat protein protein-coding Atac153_MAPQ30_peak_647 chr10 4878032 4878032 + 7.28788 NA intron (NM_001271025, intron 4 of 6) intron (NM_001271025, intron 4 of 6) 9663 NM_001040177 83592 Hs.657944 NM_031436 HPRD:07472 AKR1E2 AKR1CL2|AKRDC1|LoopADR|hTSP|htAKR aldo-keto reductase family 1, member E2 protein-coding Atac153_MAPQ30_peak_4669 chr3 48631726 48631726 + 7.28788 NA intron (NM_000094, intron 2 of 117) intron (NM_000094, intron 2 of 117) 867 NM_000094 1294 Hs.476218 NM_000094 HPRD:00358 COL7A1 EBD1|EBDCT|EBR1 collagen, type VII, alpha 1 protein-coding Atac153_MAPQ30_peak_1315 chr11 112593264 112593264 + 7.28788 NA Intergenic L2b|LINE|L2 -166739 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LOC387810 - uncharacterized LOC387810 ncRNA Atac153_MAPQ30_peak_1605 chr12 104742294 104742294 + 7.28788 NA 3' UTR (NM_182729, exon 15 of 15) 3' UTR (NM_182729, exon 15 of 15) 44784 NM_001008394 493861 Hs.659857 NM_001008394 HPRD:17415 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding Atac153_MAPQ30_peak_5852 chr6 167816987 167816987 + 7.28788 NA Intergenic Intergenic -18989 NM_004610 6953 Hs.351 NM_004610 TCP10 TCP10A t-complex 10 protein-coding Atac153_MAPQ30_peak_5711 chr6 58776961 58776961 + 7.28788 NA Intergenic ALR/Alpha|Satellite|centr -489237 NR_125728 375513 Hs.561539 NM_206908 GUSBP4 C6orf216|GUSBL2|SMA3-L|SMAC3L|b55C20.2 glucuronidase, beta pseudogene 4 pseudo Atac153_MAPQ30_peak_5371 chr5 110217784 110217784 + 7.28788 NA Intergenic MER57-int|LTR|ERV1 143030 NM_138773 91137 Hs.75639 NM_138773 HPRD:14283 SLC25A46 - solute carrier family 25, member 46 protein-coding Atac153_MAPQ30_peak_2463 chr16 27419488 27419488 + 7.28788 NA intron (NM_181079, intron 2 of 9) L2b|LINE|L2 6005 NM_181078 50615 Hs.210546 NM_021798 IL21R CD360|NILR interleukin 21 receptor protein-coding Atac153_MAPQ30_peak_504 chr1 205344101 205344101 + 7.28788 NA intron (NR_038425, intron 1 of 3) intron (NR_038425, intron 1 of 3) 1721 NR_038425 284576 Hs.585440 NR_038425 ENSG00000226235 LEMD1-AS1 - LEMD1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2118 chr15 29366341 29366341 + 7.28788 NA intron (NM_001130414, intron 3 of 12) L1MB3|LINE|L1 152501 NM_001130414 321 Hs.618112 NM_005503 HPRD:04090 APBA2 D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L amyloid beta (A4) precursor protein-binding, family A, member 2 protein-coding Atac153_MAPQ30_peak_6825 chr9 133418950 133418950 + 7.28788 NA Intergenic Intergenic 35931 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA Atac153_MAPQ30_peak_1355 chr11 120058324 120058324 + 7.28788 NA Intergenic Intergenic -23423 NM_178507 220323 Hs.445081 NM_178507 OAF NS5ATP13TP2 OAF homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_4845 chr3 133541687 133541687 + 7.28788 NA Intergenic Intergenic 38810 NM_021203 58477 Hs.12152 NM_021203 HPRD:18105 SRPRB APMCF1 signal recognition particle receptor, B subunit protein-coding Atac153_MAPQ30_peak_5846 chr6 166579214 166579214 + 7.28788 NA exon (NM_003181, exon 4 of 9) exon (NM_003181, exon 4 of 9) 2943 NM_001270484 6862 Hs.389457 NM_003181 HPRD:03236 T SAVA|TFT T, brachyury homolog (mouse) protein-coding Atac153_MAPQ30_peak_2026 chr14 91763610 91763610 + 7.28788 NA intron (NM_001080414, intron 22 of 29) intron (NM_001080414, intron 22 of 29) -43386 NM_003485 8111 Hs.8882 NM_003485 HPRD:03241 GPR68 GPR12A|OGR1 G protein-coupled receptor 68 protein-coding Atac153_MAPQ30_peak_5438 chr5 146435524 146435524 + 7.28788 NA 5' UTR (NM_181676, exon 1 of 9) 5' UTR (NM_181676, exon 1 of 9) 176 NM_181674 5521 Hs.627618 NM_181674 HPRD:05059 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2, regulatory subunit B, beta protein-coding Atac153_MAPQ30_peak_5015 chr4 8417618 8417618 + 7.28788 NA exon (NM_001101667, exon 3 of 17) exon (NM_001101667, exon 3 of 17) 24834 NM_001101667 8310 Hs.479122 NM_003501 HPRD:04552 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding Atac153_MAPQ30_peak_6922 chrX 17466753 17466753 + 7.28788 NA intron (NM_001291867, intron 1 of 8) intron (NM_001291867, intron 1 of 8) 22749 NR_039925 100616249 NR_039925 MIR4768 - microRNA 4768 ncRNA Atac153_MAPQ30_peak_126 chr1 20889962 20889962 + 7.28788 NA Intergenic Intergenic 11030 NM_207334 163933 Hs.429179 NM_207334 HPRD:16881 FAM43B - family with sequence similarity 43, member B protein-coding Atac153_MAPQ30_peak_1647 chr12 112974678 112974678 + 7.28788 NA Intergenic Intergenic 118142 NM_002834 5781 Hs.506852 NM_002834 HPRD:01470 PTPN11 BPTP3|CFC|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2 protein tyrosine phosphatase, non-receptor type 11 protein-coding Atac153_MAPQ30_peak_6588 chr9 14348319 14348319 + 7.28788 NA intron (NM_001190738, intron 1 of 8) intron (NM_001190738, intron 1 of 8) -34274 NM_001190737 4781 Hs.644095 NM_005596 HPRD:09008 NFIB CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I/B protein-coding Atac153_MAPQ30_peak_6211 chr7 154507215 154507215 + 7.28788 NA intron (NM_130797, intron 7 of 25) intron (NM_130797, intron 7 of 25) -213012 NR_024477 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1OS PAXIP1-AS2 PAXIP1 opposite strand ncRNA Atac153_MAPQ30_peak_2487 chr16 33964984 33964984 + 7.28788 NA Intergenic CpG -2481 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA Atac153_MAPQ30_peak_1962 chr14 68990093 68990093 + 7.28788 NA intron (NM_133509, intron 10 of 10) intron (NM_133509, intron 10 of 10) 270538 NM_004926 677 Hs.85155 NM_004926 HPRD:03041 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding Atac153_MAPQ30_peak_3065 chr18 42413266 42413266 + 7.28788 NA intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 136865 NR_036203 100422829 NR_036203 miRBase:MI0015848 MIR4319 - microRNA 4319 ncRNA Atac153_MAPQ30_peak_6692 chr9 94126840 94126840 + 7.28788 NA Intergenic MER52C|LTR|ERV1 -2634 NM_001698 549 Hs.175905 NM_001698 HPRD:08987 AUH - AU RNA binding protein/enoyl-CoA hydratase protein-coding Atac153_MAPQ30_peak_1623 chr12 108902240 108902240 + 7.28788 NA Intergenic Intergenic -6811 NM_007076 11153 Hs.661891 NM_007076 FICD HIP13|HYPE|UNQ3041 FIC domain containing protein-coding Atac153_MAPQ30_peak_6603 chr9 27806601 27806601 + 7.28788 NA Intergenic LTR46-int|LTR|ERV1 -232737 NM_001256054 203228 Hs.493639 NM_018325 HPRD:12975 C9orf72 ALSFTD|FTDALS chromosome 9 open reading frame 72 protein-coding Atac153_MAPQ30_peak_2703 chr17 10192382 10192382 + 7.28788 NA Intergenic MER5A|DNA|hAT-Charlie 83940 NM_003802 8735 Hs.711142 NM_003802 HPRD:04599 MYH13 MyHC-IIL|MyHC-eo myosin, heavy chain 13, skeletal muscle protein-coding Atac153_MAPQ30_peak_3817 chr2 192030958 192030958 + 7.28788 NA Intergenic Intergenic -14636 NM_001243835 6775 Hs.80642 NM_003151 HPRD:02779 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding Atac153_MAPQ30_peak_1966 chr14 69331059 69331059 + 7.28788 NA Intergenic Intergenic -68099 NM_001244701 677 Hs.85155 NM_004926 HPRD:03041 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding Atac153_MAPQ30_peak_5017 chr4 9556650 9556650 + 7.28788 NA Intergenic Intergenic 1287 NR_031688 100302277 NR_031688 miRBase:MI0006422 MIR548I2 MIR548I-2|MIRN548I2|hsa-mir-548i-2 microRNA 548i-2 ncRNA Atac153_MAPQ30_peak_4783 chr3 108054419 108054419 + 7.28788 NA intron (NM_001282557, intron 2 of 9) ERVL-E-int|LTR|ERVL 23787 NM_001282557 11148 Hs.252351 NM_007072 HPRD:05082 HHLA2 B7H7 HERV-H LTR-associating 2 protein-coding Atac153_MAPQ30_peak_3454 chr2 23498973 23498973 + 7.28788 NA Intergenic LTR16B2|LTR|ERVL -109325 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch-like family member 29 protein-coding Atac153_MAPQ30_peak_5540 chr5 178714582 178714582 + 7.28788 NA intron (NM_021599, intron 2 of 10) intron (NM_021599, intron 2 of 10) 57849 NM_021599 9509 Hs.23871 NM_014244 HPRD:05173 ADAMTS2 ADAM-TS2|ADAMTS-2|ADAMTS-3|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI ADAM metallopeptidase with thrombospondin type 1 motif, 2 protein-coding Atac153_MAPQ30_peak_2664 chr17 3457239 3457239 + 7.28788 NA intron (NM_145068, intron 2 of 17) intron (NM_145068, intron 2 of 17) 4050 NM_145068 162514 Hs.446255 NM_145068 HPRD:06141 TRPV3 OLMS|VRL3 transient receptor potential cation channel, subfamily V, member 3 protein-coding Atac153_MAPQ30_peak_3831 chr2 201609203 201609203 + 7.28788 NA intron (NR_001557, intron 9 of 30) intron (NR_001557, intron 9 of 30) -9303 NR_037886 100507140 Hs.382116 NR_037886 ENSG00000237166 LOC100507140 - uncharacterized LOC100507140 ncRNA Atac153_MAPQ30_peak_6739 chr9 110499718 110499718 + 7.28788 NA Intergenic Intergenic -247671 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel-like factor 4 (gut) protein-coding Atac153_MAPQ30_peak_6823 chr9 132220050 132220050 + 7.28788 NA Intergenic Intergenic -30889 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 - long intergenic non-protein coding RNA 963 ncRNA Atac153_MAPQ30_peak_5014 chr4 8305961 8305961 + 7.28788 NA exon (NM_053044, exon 8 of 9) exon (NM_053044, exon 8 of 9) 34469 NM_053044 94031 Hs.479119 NM_053044 HPRD:08821 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding Atac153_MAPQ30_peak_6780 chr9 120595798 120595798 + 7.28788 NA Intergenic L2a|LINE|L2 129345 NM_138554 7099 Hs.174312 NM_003266 HPRD:04325 TLR4 ARMD10|CD284|TLR-4|TOLL toll-like receptor 4 protein-coding Atac153_MAPQ30_peak_6933 chrX 18766795 18766795 + 7.28788 NA intron (NM_152226, intron 6 of 17) MLT1H|LTR|ERVL-MaLR -55989 NR_046642 100874004 NR_046642 PPEF1-AS1 - PPEF1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_7029 chrX 49762979 49762979 + 7.28788 NA intron (NM_001127898, intron 3 of 14) intron (NM_001127898, intron 3 of 14) -4775 NR_030241 693124 NR_030241 MIR532 MIRN532|hsa-mir-532 microRNA 532 ncRNA Atac153_MAPQ30_peak_4754 chr3 69734360 69734360 + 7.28788 NA Intergenic MIRc|SINE|MIR -54226 NM_198159 4286 Hs.166017 NM_000248 HPRD:01138 MITF CMM8|MI|WS2|WS2A|bHLHe32 microphthalmia-associated transcription factor protein-coding Atac153_MAPQ30_peak_7020 chrX 48419940 48419940 + 7.28788 NA 3' UTR (NM_002536, exon 6 of 6) 3' UTR (NM_002536, exon 6 of 6) -12801 NM_006743 5935 Hs.301404 NM_006743 RBM3 IS1-RNPL|RNPL RNA binding motif (RNP1, RRM) protein 3 protein-coding Atac153_MAPQ30_peak_2190 chr15 63619962 63619962 + 7.28788 NA intron (NM_001293642, intron 7 of 8) intron (NM_001293642, intron 7 of 8) 50213 NM_031301 83464 Hs.511703 NM_031301 HPRD:06361 APH1B APH-1B|PRO1328|PSFL|TAAV688 APH1B gamma secretase subunit protein-coding Atac153_MAPQ30_peak_1269 chr11 75286635 75286635 + 7.28788 NA Intergenic L2a|LINE|L2 13534 NM_001235 871 Hs.596449 NM_001235 HPRD:02968 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PPROM|RA-A47|SERPINH2|gp46 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) protein-coding Atac153_MAPQ30_peak_6410 chr8 81909096 81909096 + 7.28788 NA intron (NM_018440, intron 3 of 8) intron (NM_018440, intron 3 of 8) 115207 NM_018440 55824 Hs.266175 NM_018440 HPRD:05772 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding Atac153_MAPQ30_peak_7050 chrX 58024554 58024554 + 7.28788 NA Intergenic L1MA1|LINE|L1 -87487 NM_007156 7789 Hs.550094 NM_007156 HPRD:02210 ZXDA ZNF896 zinc finger, X-linked, duplicated A protein-coding Atac153_MAPQ30_peak_4948 chr3 196048978 196048978 + 7.28788 NA intron (NR_046724, intron 1 of 1) MSTB|LTR|ERVL-MaLR 3775 NR_046724 100874214 Hs.672105 NR_046724 TM4SF19-AS1 - TM4SF19 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5647 chr6 34530458 34530458 + 7.28788 NA Intergenic MIR|SINE|MIR -6348 NM_001252294 25803 Hs.485158 NM_012391 HPRD:12176 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding Atac153_MAPQ30_peak_6609 chr9 33467278 33467278 + 7.28788 NA TTS (NR_106910) TTS (NR_106910) 655 NR_106910 102465512 NR_106910 MIR6851 hsa-mir-6851 microRNA 6851 ncRNA Atac153_MAPQ30_peak_141 chr1 23417030 23417030 + 7.28788 NA intron (NM_001142546, intron 3 of 3) intron (NM_001142546, intron 3 of 3) 46232 NR_036057 100422866 NR_036057 MIR3115 - microRNA 3115 ncRNA Atac153_MAPQ30_peak_5811 chr6 150899124 150899124 + 7.28788 NA Intergenic Intergenic -21875 NM_001029884 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 protein-coding Atac153_MAPQ30_peak_1682 chr12 122336066 122336066 + 7.28788 NA intron (NR_048555, intron 2 of 4) intron (NR_048555, intron 2 of 4) 9429 NM_002813 5715 Hs.131151 NM_002813 HPRD:04394 PSMD9 Rpn4|p27 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 protein-coding Atac153_MAPQ30_peak_4534 chr3 4829856 4829856 + 7.28788 NA intron (NM_001168272, intron 51 of 60) intron (NM_001168272, intron 51 of 60) -36582 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript (non-protein coding) ncRNA Atac153_MAPQ30_peak_3086 chr18 45612393 45612393 + 7.28788 NA intron (NM_001039360, intron 1 of 2) intron (NM_001039360, intron 1 of 2) 51287 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding Atac153_MAPQ30_peak_5442 chr5 148725099 148725099 + 7.28788 NA 5' UTR (NM_152407, exon 1 of 4) 5' UTR (NM_152407, exon 1 of 4) 122 NM_152407 134266 Hs.511816 NM_152407 HPRD:17079 GRPEL2 Mt-GrpE#2 GrpE-like 2, mitochondrial (E. coli) protein-coding Atac153_MAPQ30_peak_1432 chr12 3200036 3200036 + 7.28788 NA intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 13515 NM_006675 10867 Hs.504517 NM_006675 HPRD:14823 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding Atac153_MAPQ30_peak_5596 chr6 13299990 13299990 + 7.28788 NA Intergenic Intergenic -4172 NM_001242698 100130357 Hs.657498 NM_001242698 LOC100130357 - uncharacterized LOC100130357 protein-coding Atac153_MAPQ30_peak_5567 chr6 4942811 4942811 + 7.28788 NA intron (NR_026590, intron 6 of 8) intron (NR_026590, intron 6 of 8) 52585 NM_001143971 9425 Hs.269092 NM_004824 HPRD:04803 CDYL CDYL1 chromodomain protein, Y-like protein-coding Atac153_MAPQ30_peak_6964 chrX 30135805 30135805 + 7.28788 NA Intergenic MLT1G|LTR|ERVL-MaLR -97870 NM_002364 4113 Hs.113824 NM_002364 HPRD:02109 MAGEB2 CT3.2|DAM6|MAGE-XP-2 melanoma antigen family B, 2 protein-coding Atac153_MAPQ30_peak_3642 chr2 101728880 101728880 + 7.28788 NA intron (NM_001102426, intron 1 of 19) intron (NM_001102426, intron 1 of 19) 38966 NM_001102426 11138 Hs.442657 NM_007063 HPRD:06752 TBC1D8 AD3|HBLP1|TBC1D8A|VRP TBC1 domain family, member 8 (with GRAM domain) protein-coding Atac153_MAPQ30_peak_236 chr1 44763640 44763640 + 7.28788 NA intron (NM_024066, intron 6 of 8) intron (NM_024066, intron 6 of 8) -53685 NR_110056 100874278 Hs.132497 NR_046817 ERI3-IT1 - ERI3 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_348 chr1 117471863 117471863 + 7.28788 NA intron (NM_020440, intron 1 of 8) L2a|LINE|L2 19174 NM_020440 5738 Hs.418093 NM_020440 HPRD:03124 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding Atac153_MAPQ30_peak_6435 chr8 98776369 98776369 + 7.28788 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -11440 NM_018407 55353 Hs.492314 NM_018407 LAPTM4B LAPTM4beta|LC27 lysosomal protein transmembrane 4 beta protein-coding Atac153_MAPQ30_peak_4919 chr3 180402877 180402877 + 7.20949 NA Intergenic LTR41|LTR|ERVL -5594 NM_181426 339829 Hs.712820 NM_181426 ENSG00000145075 CCDC39 CILD14|FAP59 coiled-coil domain containing 39 protein-coding Atac153_MAPQ30_peak_5044 chr4 23037794 23037794 + 7.20949 NA Intergenic L1PA15-16|LINE|L1 322082 NM_001277225 57733 Hs.653107 NM_020973 HPRD:09428 GBA3 CBG|CBGL1|GLUC|KLRP glucosidase, beta, acid 3 protein-coding Atac153_MAPQ30_peak_5121 chr4 88586788 88586788 + 7.20949 NA Intergenic Intergenic 15334 NM_001079911 1758 Hs.652366 NM_004407 HPRD:02989 DMP1 ARHP|ARHR|DMP-1 dentin matrix acidic phosphoprotein 1 protein-coding Atac153_MAPQ30_peak_5704 chr6 52578502 52578502 + 7.20949 NA Intergenic MIRb|SINE|MIR 31455 NR_033760 730152 Hs.739662 NR_033760 GSTA7P GSTAP2|GSTAP6 glutathione S-transferase alpha 7, pseudogene pseudo Atac153_MAPQ30_peak_761 chr10 54700889 54700889 + 7.20949 NA Intergenic HUERS-P2-int|LTR|ERV1 -169429 NM_000242 4153 Hs.499674 NM_000242 HPRD:01107 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose-binding lectin (protein C) 2, soluble protein-coding Atac153_MAPQ30_peak_5418 chr5 138153907 138153907 + 7.09881 NA intron (NM_001290309, intron 4 of 16) AluJo|SINE|Alu -57012 NM_001290312 1495 Hs.445981 NM_001903 HPRD:00285 CTNNA1 CAP102 catenin (cadherin-associated protein), alpha 1, 102kDa protein-coding Atac153_MAPQ30_peak_4511 chr22 48959826 48959826 + 7.03203 NA intron (NM_001082967, intron 1 of 3) LTR16C|LTR|ERVL -12292 NM_015381 25817 Hs.436854 NM_015381 HPRD:13295 FAM19A5 QLLK5208|TAFA-5|TAFA5|UNQ5208 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 protein-coding Atac153_MAPQ30_peak_7294 chrX 154907326 154907326 + 7.03203 NA Intergenic LTR79|LTR|ERVL -64704 NM_001184797 55217 Hs.133321 NM_018196 HPRD:06743 TMLHE AUTSX6|BBOX2|TMLD|TMLH|TMLHED|XAP130 trimethyllysine hydroxylase, epsilon protein-coding Atac153_MAPQ30_peak_7273 chrX 149332574 149332574 + 7.03203 NA Intergenic Intergenic -63665 NR_031748 100313839 NR_031748 miRBase:MI0010633 MIR2114 - microRNA 2114 ncRNA Atac153_MAPQ30_peak_3608 chr2 91763748 91763748 + 7.03203 NA Intergenic Intergenic 84227 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_3416 chr2 11893089 11893089 + 7.03203 NA intron (NM_145693, intron 1 of 19) LTR90A|LTR|LTR 6367 NM_145693 23175 Hs.467740 NM_145693 HPRD:09271 LPIN1 PAP1 lipin 1 protein-coding Atac153_MAPQ30_peak_1570 chr12 78158922 78158922 + 6.99936 NA Intergenic Intergenic -66147 NM_001024383 89795 Hs.655301 NM_014903 HPRD:10114 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding Atac153_MAPQ30_peak_1105 chr11 16901048 16901048 + 6.98679 NA intron (NM_175058, intron 3 of 22) intron (NM_175058, intron 3 of 22) 134915 NM_175058 144100 Hs.12332 NM_175058 HPRD:15142 PLEKHA7 - pleckstrin homology domain containing, family A member 7 protein-coding Atac153_MAPQ30_peak_691 chr10 23821738 23821738 + 6.89008 NA Intergenic AluJb|SINE|Alu 93540 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding Atac153_MAPQ30_peak_6097 chr7 103894823 103894823 + 6.89008 NA Intergenic Intergenic -46328 NM_002553 5001 Hs.432948 NM_002553 HPRD:09086 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex, subunit 5 protein-coding Atac153_MAPQ30_peak_4225 chr21 11110084 11110084 + 6.78045 NA Intergenic Intergenic -11147 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding Atac153_MAPQ30_peak_4911 chr3 171476190 171476190 + 6.78045 NA intron (NM_001130081, intron 1 of 25) intron (NM_001130081, intron 1 of 25) 52094 NM_001130081 5337 Hs.382865 NM_002662 HPRD:03855 PLD1 - phospholipase D1, phosphatidylcholine-specific protein-coding Atac153_MAPQ30_peak_2484 chr16 33957190 33957190 + 6.76542 NA Intergenic Intergenic 5313 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA Atac153_MAPQ30_peak_2761 chr17 21245623 21245623 + 6.67608 NA Intergenic Intergenic -34076 NM_021012 3768 Hs.200629 NM_021012 HPRD:09083 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium inwardly-rectifying channel, subfamily J, member 12 protein-coding Atac153_MAPQ30_peak_2980 chr18 108238 108238 + 6.62838 NA promoter-TSS (NR_033770) promoter-TSS (NR_033770) -827 NR_033770 727758 Hs.585843 NR_033770 ROCK1P1 - Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1 pseudo Atac153_MAPQ30_peak_466 chr1 195869023 195869023 + 6.57771 NA Intergenic MLT1G3|LTR|ERVL-MaLR 682588 NR_039888 100616363 NR_039888 MIR4735 - microRNA 4735 ncRNA Atac153_MAPQ30_peak_7303 chrY 13468302 13468302 + 6.57632 NA Intergenic BSR/Beta|Satellite|Satellite 1065087 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_4032 chr20 23048245 23048245 + 6.57535 NA Intergenic Intergenic -17944 NM_000361 7056 Hs.2030 NM_000361 HPRD:01764 THBD AHUS6|BDCA3|CD141|THPH12|THRM|TM thrombomodulin protein-coding Atac153_MAPQ30_peak_6466 chr8 122165837 122165837 + 6.56871 NA Intergenic Intergenic -341528 NM_021021 6641 Hs.46701 NM_021021 HPRD:02490 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) protein-coding Atac153_MAPQ30_peak_6455 chr8 107841205 107841205 + 6.47590 NA Intergenic Intergenic -58733 NM_139166 137735 Hs.374668 NM_139166 HPRD:11608 ABRA STARS actin-binding Rho activating protein protein-coding Atac153_MAPQ30_peak_2772 chr17 22020718 22020718 + 6.41967 NA Intergenic Intergenic -1719 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2-like 1 protein-coding Atac153_MAPQ30_peak_3740 chr2 133016821 133016821 + 6.41967 NA Intergenic AluJb|SINE|Alu -1279 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_4037 chr20 24010920 24010920 + 6.40310 NA Intergenic MSTB1|LTR|ERVL-MaLR -41504 NM_178311 92086 Hs.355394 NM_080920 HPRD:17037 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding Atac153_MAPQ30_peak_3994 chr20 6948677 6948677 + 6.40310 NA Intergenic Intergenic 199932 NM_001200 650 Hs.73853 NM_001200 HPRD:00206 BMP2 BDA2|BMP2A bone morphogenetic protein 2 protein-coding Atac153_MAPQ30_peak_483 chr1 202960568 202960568 + 6.40310 NA intron (NR_036557, intron 1 of 4) intron (NR_036557, intron 1 of 4) 15825 NR_036557 100506747 Hs.642024 NR_036557 LOC100506747 - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein LOC641515 homolog pseudo Atac153_MAPQ30_peak_3542 chr2 56097905 56097905 + 6.40310 NA exon (NM_001039349, exon 10 of 11) exon (NM_001039349, exon 10 of 11) 53393 NM_001039349 2202 Hs.76224 NM_004105 HPRD:03331 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin-like extracellular matrix protein 1 protein-coding Atac153_MAPQ30_peak_6492 chr8 132039850 132039850 + 6.38241 NA intron (NM_001115, intron 1 of 17) intron (NM_001115, intron 1 of 17) 12985 NM_001115 114 Hs.591859 NM_001115 HPRD:00051 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 (brain) protein-coding Atac153_MAPQ30_peak_2829 chr17 41466414 41466414 + 6.35974 NA promoter-TSS (NR_027412) promoter-TSS (NR_027412) -148 NR_027413 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA Atac153_MAPQ30_peak_5629 chr6 30281886 30281886 + 6.29750 NA intron (NR_102326, intron 1 of 2).7 MLT1F1|LTR|ERVL-MaLR 12025 NR_052012 414778 Hs.485041 NR_052012 ENSG00000270604 HCG17 LINC00046|NCRNA00046 HLA complex group 17 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4398 chr22 30757478 30757478 + 6.29750 NA intron (NM_001017437, intron 1 of 11) MER39|LTR|ERV1 -4565 NM_005877 10291 Hs.406277 NM_005877 HPRD:06903 SF3A1 PRP21|PRPF21|SAP114|SF3A120 splicing factor 3a, subunit 1, 120kDa protein-coding Atac153_MAPQ30_peak_3354 chr19 55892319 55892319 + 6.29750 NA intron (NM_001190764, intron 1 of 1) intron (NM_001190764, intron 1 of 1) 3308 NM_001190764 388564 Hs.534672 NM_001190764 TMEM238 - transmembrane protein 238 protein-coding Atac153_MAPQ30_peak_7251 chrX 143497919 143497919 + 6.29750 NA Intergenic Intergenic 530746 NR_121210 389898 Hs.585177 NM_001012989 HPRD:18504 UBE2NL Li174 ubiquitin-conjugating enzyme E2N-like protein-coding Atac153_MAPQ30_peak_6959 chrX 28059454 28059454 + 6.29750 NA Intergenic MSTB|LTR|ERVL-MaLR -59888 NM_001017930 139425 Hs.447365 NM_001017930 HPRD:18551 DCAF8L1 WDR42B DDB1 and CUL4 associated factor 8-like 1 protein-coding Atac153_MAPQ30_peak_343 chr1 116295759 116295759 + 6.29750 NA intron (NM_001232, intron 1 of 10) intron (NM_001232, intron 1 of 10) 15667 NM_001232 845 Hs.57975 NM_001232 HPRD:00256 CASQ2 PDIB2 calsequestrin 2 (cardiac muscle) protein-coding Atac153_MAPQ30_peak_4799 chr3 119372703 119372703 + 6.29750 NA intron (NM_022135, intron 2 of 3) L2c|LINE|L2 6701 NM_022135 64091 Hs.534383 NM_022135 HPRD:16160 POPDC2 POP2 popeye domain containing 2 protein-coding Atac153_MAPQ30_peak_182 chr1 34256768 34256768 + 6.29750 NA intron (NM_052896, intron 11 of 69) intron (NM_052896, intron 11 of 69) -69308 NM_145205 127540 Hs.568628 NM_145205 HPRD:14038 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding Atac153_MAPQ30_peak_3871 chr2 219257409 219257409 + 6.29750 NA intron (NM_000578, intron 11 of 14) MIRc|SINE|MIR -5652 NM_001206878 58190 Hs.444468 NM_021198 HPRD:05615 CTDSP1 NIF3|NLI-IF|NLIIF|SCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 protein-coding Atac153_MAPQ30_peak_7052 chrX 58155188 58155188 + 6.29750 NA Intergenic HSAT4|Satellite|centr -218121 NM_007156 7789 Hs.550094 NM_007156 HPRD:02210 ZXDA ZNF896 zinc finger, X-linked, duplicated A protein-coding Atac153_MAPQ30_peak_572 chr1 229575730 229575730 + 6.29750 NA Intergenic Intergenic -5887 NM_001100 58 Hs.1288 NM_001100 HPRD:00030 ACTA1 ACTA|ASMA|CFTD|CFTD1|CFTDM|MPFD|NEM1|NEM2|NEM3 actin, alpha 1, skeletal muscle protein-coding Atac153_MAPQ30_peak_1071 chr11 8239678 8239678 + 6.29750 NA Intergenic Intergenic 45747 NR_073006 4004 Hs.654426 NM_002315 HPRD:01738 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 (rhombotin 1) protein-coding Atac153_MAPQ30_peak_7009 chrX 45305726 45305726 + 6.29750 NA Intergenic L2c|LINE|L2 -58907 NR_104645 101927528 Hs.550772 NR_104644 ENSG00000229563 LINC01204 - long intergenic non-protein coding RNA 1204 ncRNA Atac153_MAPQ30_peak_2998 chr18 7288995 7288995 + 6.29750 NA Intergenic Intergenic 57858 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding Atac153_MAPQ30_peak_2542 chr16 67797309 67797309 + 6.29750 NA intron (NM_020850, intron 3 of 13) intron (NM_020850, intron 3 of 13) 43246 NM_020850 57610 Hs.368569 NM_020850 HPRD:15207 RANBP10 - RAN binding protein 10 protein-coding Atac153_MAPQ30_peak_67 chr1 11209400 11209400 + 6.29750 NA non-coding (NR_046600, exon 4 of 4) non-coding (NR_046600, exon 4 of 4) 5445 NR_046600 100873935 Hs.679133 NR_046600 ENSG00000225602 MTOR-AS1 - MTOR antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6347 chr8 38831274 38831274 + 6.29750 NA promoter-TSS (NM_153692) promoter-TSS (NM_153692) -394 NM_153692 203100 Hs.661014 NM_153692 HPRD:08818 HTRA4 - HtrA serine peptidase 4 protein-coding Atac153_MAPQ30_peak_3385 chr2 3321015 3321015 + 6.29750 NA intron (NM_003310, intron 3 of 8) intron (NM_003310, intron 3 of 8) 60638 NM_003310 7260 Hs.502770 NM_003310 HPRD:10287 TSSC1 - tumor suppressing subtransferable candidate 1 protein-coding Atac153_MAPQ30_peak_3183 chr19 1888460 1888460 + 6.29750 NA Intergenic Intergenic -2942 NM_031213 81926 Hs.465542 NM_031213 HPRD:07475 ABHD17A C19orf27|FAM108A1 abhydrolase domain containing 17A protein-coding Atac153_MAPQ30_peak_2227 chr15 70703207 70703207 + 6.29750 NA Intergenic Intergenic 291413 NM_001008224 55075 Hs.108049 NM_018003 HPRD:11657 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding Atac153_MAPQ30_peak_1654 chr12 114232341 114232341 + 6.29750 NA Intergenic Intergenic -20853 NR_110025 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 - long intergenic non-protein coding RNA 1234 ncRNA Atac153_MAPQ30_peak_5225 chr5 3253334 3253334 + 6.29750 NA Intergenic Intergenic 75385 NR_104617 102467074 Hs.575250 NR_104617 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA Atac153_MAPQ30_peak_3409 chr2 10643790 10643790 + 6.29750 NA Intergenic Intergenic 53936 NR_110597 101929715 Hs.634550 NR_110597 LOC101929715 - uncharacterized LOC101929715 ncRNA Atac153_MAPQ30_peak_1456 chr12 7473328 7473328 + 6.29750 NA exon (NM_001080454, exon 6 of 13) exon (NM_001080454, exon 6 of 13) 16400 NM_001080454 341392 Hs.450804 NM_001080454 ENSG00000215009 ACSM4 - acyl-CoA synthetase medium-chain family member 4 protein-coding Atac153_MAPQ30_peak_1895 chr14 23592227 23592227 + 6.29750 NA Intergenic Intergenic -3407 NM_001805 1053 Hs.558308 NM_001805 HPRD:02852 CEBPE C/EBP-epsilon|CRP1 CCAAT/enhancer binding protein (C/EBP), epsilon protein-coding Atac153_MAPQ30_peak_2411 chr16 14322019 14322019 + 6.29750 NA intron (NM_014048, intron 8 of 16) L1MB3|LINE|L1 -75805 NR_030177 574455 NR_030177 miRBase:MI0003137 MIR193B MIRN193B microRNA 193b ncRNA Atac153_MAPQ30_peak_6664 chr9 85833716 85833716 + 6.29750 NA Intergenic Intergenic 48486 NM_001244962 257019 Hs.127535 NM_174938 HPRD:07402 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Atac153_MAPQ30_peak_226 chr1 42621473 42621473 + 6.29750 NA TTS (NM_007102) TTS (NM_007102) 2381 NM_007102 2981 Hs.32966 NM_007102 HPRD:03170 GUCA2B GCAP-II|UGN guanylate cyclase activator 2B (uroguanylin) protein-coding Atac153_MAPQ30_peak_1763 chr13 22519918 22519918 + 6.29750 NA Intergenic THE1D|LTR|ERVL-MaLR -67619 NR_047040 100874182 Hs.148951 NR_047040 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA Atac153_MAPQ30_peak_809 chr10 78059217 78059217 + 6.29750 NA intron (NM_032024, intron 4 of 5) intron (NM_032024, intron 4 of 5) 516698 NM_032024 83938 Hs.118161 NM_032024 HPRD:12560 C10orf11 OCA5|OCA7 chromosome 10 open reading frame 11 protein-coding Atac153_MAPQ30_peak_2537 chr16 67029685 67029685 + 6.29750 NA exon (NM_173815, exon 2 of 12) exon (NM_173815, exon 2 of 12) -4731 NM_001190202 283848 Hs.346947 NM_173815 HPRD:07116 CES4A CES6|CES8 carboxylesterase 4A protein-coding Atac153_MAPQ30_peak_2320 chr15 92646456 92646456 + 6.29750 NA intron (NM_013272, intron 3 of 9) intron (NM_013272, intron 3 of 9) 249518 NM_013272 28232 Hs.311187 NM_013272 HPRD:07502 SLCO3A1 OATP-D|OATP3A1|OATPD|SLC21A11 solute carrier organic anion transporter family, member 3A1 protein-coding Atac153_MAPQ30_peak_243 chr1 46034707 46034707 + 6.29750 NA intron (NM_153326, intron 7 of 8) intron (NM_153326, intron 7 of 8) -14953 NM_152298 4678 Hs.319334 NM_002482 HPRD:04423 NASP FLB7527|PRO1999 nuclear autoantigenic sperm protein (histone-binding) protein-coding Atac153_MAPQ30_peak_4250 chr21 34577348 34577348 + 6.29750 NA Intergenic Intergenic -24852 NM_001289126 3455 Hs.708195 NM_000874 HPRD:03850 IFNAR2 IFN-R|IFN-alpha-REC|IFNABR|IFNARB interferon (alpha, beta and omega) receptor 2 protein-coding Atac153_MAPQ30_peak_3848 chr2 207932336 207932336 + 6.29750 NA Intergenic Intergenic 42461 NR_036227 100423036 NR_036227 MIR2355 - microRNA 2355 ncRNA Atac153_MAPQ30_peak_7008 chrX 44583978 44583978 + 6.29750 NA Intergenic L1MC4|LINE|L1 -119271 NM_022076 63904 Hs.534478 NM_022076 HPRD:06494 DUSP21 LMWDSP21 dual specificity phosphatase 21 protein-coding Atac153_MAPQ30_peak_2092 chr14 105837985 105837985 + 6.29750 NA intron (NM_001243127, intron 8 of 23) intron (NM_001243127, intron 8 of 23) -26935 NM_001195082 647310 Hs.729499 NM_001195082 ENSG00000226174 TEX22 - testis expressed 22 protein-coding Atac153_MAPQ30_peak_917 chr10 115280878 115280878 + 6.29750 NA Intergenic L2a|LINE|L2 -29712 NM_001177660 3026 Hs.422542 NM_004132 HPRD:04890 HABP2 FSAP|HABP|HGFAL|PHBP hyaluronan binding protein 2 protein-coding Atac153_MAPQ30_peak_7037 chrX 53239110 53239110 + 6.29750 NA intron (NM_001282622, intron 12 of 25) MLT1J|LTR|ERVL-MaLR -10983 NR_106954 102466759 NR_106954 MIR6894 hsa-mir-6894 microRNA 6894 ncRNA Atac153_MAPQ30_peak_4282 chr21 40334928 40334928 + 6.29750 NA Intergenic MLT1C|LTR|ERVL-MaLR 14772 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LOC101928435 - uncharacterized LOC101928435 ncRNA Atac153_MAPQ30_peak_706 chr10 32357567 32357567 + 6.29750 NA Intergenic Intergenic -12196 NM_004521 3799 Hs.327736 NM_004521 HPRD:07214 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding Atac153_MAPQ30_peak_6567 chr8 145559175 145559175 + 6.29750 NA intron (NM_031309, intron 1 of 1) CpG 768 NM_031309 83482 Hs.31746 NM_031309 HPRD:16166 SCRT1 SCRT|ZNF898 scratch family zinc finger 1 protein-coding Atac153_MAPQ30_peak_326 chr1 112553350 112553350 + 6.29750 NA Intergenic MIR3|SINE|MIR 20160 NM_001270945 643355 Hs.279714 NM_001270945 LOC643355 - uncharacterized LOC643355 protein-coding Atac153_MAPQ30_peak_1388 chr11 129567012 129567012 + 6.29750 NA Intergenic L2c|LINE|L2 -79848 NR_120582 101929557 Hs.385785 NR_120582 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA Atac153_MAPQ30_peak_4363 chr22 26237619 26237619 + 6.29750 NA intron (NM_032608, intron 17 of 43) intron (NM_032608, intron 17 of 43) 99499 NM_032608 84700 Hs.417959 NM_032608 HPRD:09529 MYO18B - myosin XVIIIB protein-coding Atac153_MAPQ30_peak_3535 chr2 48758305 48758305 + 6.29750 NA intron (NM_001198595, intron 2 of 4) intron (NM_001198595, intron 2 of 4) 997 NM_006873 11037 Hs.44385 NM_006873 HPRD:16100 STON1 SALF|SBLF|STN1|STNB1 stonin 1 protein-coding Atac153_MAPQ30_peak_4956 chr4 960701 960701 + 6.29750 NA intron (NM_001347, intron 10 of 22) CpG-19392 6647 NM_001347 1609 Hs.584858 NM_001347 HPRD:03127 DGKQ DAGK|DAGK4|DAGK7 diacylglycerol kinase, theta 110kDa protein-coding Atac153_MAPQ30_peak_2602 chr16 84151255 84151255 + 6.29750 NA promoter-TSS (NM_003791) promoter-TSS (NM_003791) -707 NM_003791 8720 Hs.75890 NM_003791 HPRD:04522 MBTPS1 PCSK8|S1P|SKI-1 membrane-bound transcription factor peptidase, site 1 protein-coding Atac153_MAPQ30_peak_749 chr10 49496484 49496484 + 6.29750 NA Intergenic Intergenic -13543 NM_001018071 143162 Hs.664786 NM_152428 HPRD:17019 FRMPD2 PDZD5C|PDZK4|PDZK5C FERM and PDZ domain containing 2 protein-coding Atac153_MAPQ30_peak_4403 chr22 32049484 32049484 + 6.29750 NA Intergenic Intergenic -22674 NM_014338 23761 Hs.420559 NM_014338 HPRD:17854 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding Atac153_MAPQ30_peak_7283 chrX 151770590 151770590 + 6.29750 NA Intergenic MIRc|SINE|MIR -36047 NM_018558 55879 Hs.283081 NM_018558 GABRQ THETA gamma-aminobutyric acid (GABA) A receptor, theta protein-coding Atac153_MAPQ30_peak_476 chr1 201711561 201711561 + 6.29750 NA intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) 2598 NM_001167738 89796 Hs.585374 NM_020443 HPRD:10113 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding Atac153_MAPQ30_peak_2924 chr17 72545764 72545764 + 6.29750 NA Intergenic Intergenic -3454 NM_006678 10871 Hs.2605 NM_006678 HPRD:09491 CD300C CLM-6|CMRF-35|CMRF-35A|CMRF35|CMRF35-A1|CMRF35A|CMRF35A1|IGSF16|LIR CD300c molecule protein-coding Atac153_MAPQ30_peak_6961 chrX 28334237 28334237 + 6.29750 NA Intergenic L1MA4A|LINE|L1 179543 NR_106750 102465140 NR_106750 MIR6134 hsa-mir-6134 microRNA 6134 ncRNA Atac153_MAPQ30_peak_488 chr1 203605584 203605584 + 6.29750 NA intron (NM_001684, intron 1 of 20) intron (NM_001684, intron 1 of 20) 9669 NM_001684 493 Hs.343522 NM_001684 HPRD:00159 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase, Ca++ transporting, plasma membrane 4 protein-coding Atac153_MAPQ30_peak_3370 chr2 1159447 1159447 + 6.29750 NA intron (NM_018968, intron 6 of 16) intron (NM_018968, intron 6 of 16) 212893 NM_018968 54221 Hs.595069 NM_018968 HPRD:16374 SNTG2 G2SYN|SYN5 syntrophin, gamma 2 protein-coding Atac153_MAPQ30_peak_5826 chr6 158458851 158458851 + 6.29750 NA intron (NM_003898, intron 4 of 26) intron (NM_003898, intron 4 of 26) 20771 NM_001178088 8871 Hs.434494 NM_003898 HPRD:10259 SYNJ2 INPP5H synaptojanin 2 protein-coding Atac153_MAPQ30_peak_4391 chr22 30131751 30131751 + 6.29750 NA intron (NM_001003692, intron 5 of 5) intron (NM_001003692, intron 5 of 5) 15407 NM_182527 164633 Hs.643608 NM_182527 HPRD:12995 CABP7 CALN2 calcium binding protein 7 protein-coding Atac153_MAPQ30_peak_5446 chr5 149599537 149599537 + 6.29750 NA 3' UTR (NM_015981, exon 19 of 19) 3' UTR (NM_015981, exon 19 of 19) 30017 NM_014228 6534 Hs.241597 NM_014228 HPRD:09371 SLC6A7 PROT solute carrier family 6 (neurotransmitter transporter), member 7 protein-coding Atac153_MAPQ30_peak_6706 chr9 96443995 96443995 + 6.29750 NA Intergenic MIRb|SINE|MIR 105086 NM_005392 5253 Hs.211441 NM_005392 HPRD:05071 PHF2 CENP-35|GRC5|JHDM1E PHD finger protein 2 protein-coding Atac153_MAPQ30_peak_1864 chr13 109444152 109444152 + 6.29750 NA intron (NM_015011, intron 5 of 34) intron (NM_015011, intron 5 of 34) 162581 NM_001198950 23026 Hs.656587 NM_015011 HPRD:14795 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding Atac153_MAPQ30_peak_5894 chr7 2642200 2642200 + 6.29750 NA intron (NM_001287501, intron 16 of 19) intron (NM_001287501, intron 16 of 19) -29403 NM_025250 80727 Hs.440899 NM_025250 HPRD:12333 TTYH3 - tweety family member 3 protein-coding Atac153_MAPQ30_peak_4088 chr20 36831373 36831373 + 6.29750 NA Intergenic Intergenic -37673 NM_198951 7052 Hs.517033 NM_004613 HPRD:01825 TGM2 G-ALPHA-h|GNAH|HEL-S-45|TG2|TGC transglutaminase 2 protein-coding Atac153_MAPQ30_peak_633 chr10 1352364 1352364 + 6.29750 NA intron (NM_018702, intron 3 of 9) L2a|LINE|L2 146656 NR_015376 399706 Hs.721191 NM_001010910 HPRD:17990 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA Atac153_MAPQ30_peak_367 chr1 148551780 148551780 + 6.29750 NA intron (NR_104217, intron 2 of 17) L1MDa|LINE|L1 -6408 NM_001170755 284565 Hs.523572 NM_173638 HPRD:14710 NBPF15 AB14|AG3|NBPF16 neuroblastoma breakpoint family, member 15 protein-coding Atac153_MAPQ30_peak_1615 chr12 106651661 106651661 + 6.29750 NA Intergenic L1MA2|LINE|L1 -9948 NM_006825 10970 Hs.74368 NM_006825 HPRD:16717 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton-associated protein 4 protein-coding Atac153_MAPQ30_peak_3528 chr2 47081864 47081864 + 6.29750 NA intron (NR_024452, intron 1 of 2) MamRep605|Unknown|Unknown 26861 NR_024452 100134259 Hs.114449 NR_024452 ENSG00000239332 LINC01119 - long intergenic non-protein coding RNA 1119 ncRNA Atac153_MAPQ30_peak_7299 chrY 10036473 10036473 + 6.29750 NA Intergenic SSU-rRNA_Hsa|rRNA|rRNA 288066 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 (non-protein coding) ncRNA Atac153_MAPQ30_peak_739 chr10 47048966 47048966 + 6.29750 NA Intergenic MIRc|SINE|MIR -34568 NM_005972 5540 Hs.524719 NM_005972 HPRD:03476 NPY4R NPY4-R|PP1|PPYR1|Y4 neuropeptide Y receptor Y4 protein-coding Atac153_MAPQ30_peak_4379 chr22 28007460 28007460 + 6.29750 NA Intergenic Intergenic 190026 NM_002430 4330 Hs.268515 NM_002430 HPRD:08862 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 meningioma (disrupted in balanced translocation) 1 protein-coding Atac153_MAPQ30_peak_985 chr10 130160671 130160671 + 6.29750 NA Intergenic L2c|LINE|L2 76457 NR_120619 101927381 Hs.523342 NR_120619 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA Atac153_MAPQ30_peak_407 chr1 160331677 160331677 + 6.29750 NA Intergenic Intergenic -5184 NM_005598 4807 Hs.30956 NM_005598 HPRD:01212 NHLH1 HEN1|NSCL|NSCL1|bHLHa35 nescient helix loop helix 1 protein-coding Atac153_MAPQ30_peak_467 chr1 197178353 197178353 + 6.29750 NA intron (NM_001257965, intron 1 of 14) L1PB1|LINE|L1 7761 NM_001257965 23418 Hs.126135 NM_012076 HPRD:05019 CRB1 LCA8|RP12 crumbs family member 1, photoreceptor morphogenesis associated protein-coding Atac153_MAPQ30_peak_3087 chr18 45780628 45780628 + 6.29750 NA Intergenic LTR9|LTR|ERV1 -116948 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding Atac153_MAPQ30_peak_4006 chr20 16360696 16360696 + 6.29750 NA exon (NM_001199866, exon 19 of 23) exon (NM_001199866, exon 19 of 23) 193383 NM_024704 55614 Hs.101774 NM_024704 HPRD:10731 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding Atac153_MAPQ30_peak_4176 chr20 55574672 55574672 + 6.29750 NA Intergenic AluJr|SINE|Alu -214080 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2042 chr14 95787209 95787209 + 6.29750 NA promoter-TSS (NM_024734) promoter-TSS (NM_024734) -964 NM_024734 79789 Hs.301478 NM_024734 HPRD:13076 CLMN - calmin (calponin-like, transmembrane) protein-coding Atac153_MAPQ30_peak_5154 chr4 141600093 141600093 + 6.29750 NA intron (NM_015130, intron 5 of 20) intron (NM_015130, intron 5 of 20) -35859 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - TNRC18P1 pseudo Atac153_MAPQ30_peak_5766 chr6 118287430 118287430 + 6.29750 NA intron (NM_001029858, intron 1 of 7) LTR12D|LTR|ERV1 58741 NM_001029858 222553 Hs.654841 NM_001029858 HPRD:18751 SLC35F1 C6orf169|dJ230I3.1 solute carrier family 35, member F1 protein-coding Atac153_MAPQ30_peak_6874 chr9 140903298 140903298 + 6.29750 NA intron (NM_000718, intron 16 of 45) MER20|DNA|hAT-Charlie 36225 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA Atac153_MAPQ30_peak_4958 chr4 1220843 1220843 + 6.29750 NA intron (NM_001328, intron 3 of 8) intron (NM_001328, intron 3 of 8) 16935 NR_104331 285463 Hs.707614 NR_104331 CTBP1-AS PCAT10 CTBP1 antisense RNA ncRNA Atac153_MAPQ30_peak_5790 chr6 136102513 136102513 + 6.29750 NA Intergenic L1PA13|LINE|L1 -70321 NM_018945 27115 Hs.744230 NM_018945 HPRD:06870 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding Atac153_MAPQ30_peak_5462 chr5 154201007 154201007 + 6.29750 NA intron (NM_032385, intron 7 of 8) intron (NM_032385, intron 7 of 8) 29206 NM_032385 10826 Hs.519694 NM_016348 HPRD:12832 FAXDC2 C5orf4 fatty acid hydroxylase domain containing 2 protein-coding Atac153_MAPQ30_peak_3055 chr18 35043504 35043504 + 6.29750 NA intron (NM_001025087, intron 2 of 12) MIRc|SINE|MIR 102496 NM_001025089 56853 Hs.435976 NM_020180 HPRD:12534 CELF4 BRUNOL-4|BRUNOL4 CUGBP, Elav-like family member 4 protein-coding Atac153_MAPQ30_peak_4680 chr3 50386113 50386113 + 6.29750 NA intron (NM_006545, intron 6 of 10) intron (NM_006545, intron 6 of 10) -2013 NM_007022 11068 Hs.149443 NM_007022 HPRD:06143 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family, member D2 protein-coding Atac153_MAPQ30_peak_4983 chr4 4688303 4688303 + 6.29750 NA intron (NR_037888, intron 4 of 5) MIR|SINE|MIR 144445 NR_037888 100507266 Hs.276795 NR_037888 ENSG00000247708 STX18-AS1 - STX18 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_76 chr1 12754385 12754385 + 6.29750 NA Intergenic Intergenic -21733 NM_001103170 126767 Hs.464705 NM_001103169 ENSG00000188984 AADACL3 - arylacetamide deacetylase-like 3 protein-coding Atac153_MAPQ30_peak_7187 chrX 120871164 120871164 + 6.29750 NA Intergenic L1M1|LINE|L1 689702 NM_012084 2747 Hs.368538 NM_012084 HPRD:02143 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding Atac153_MAPQ30_peak_40 chr1 6543177 6543177 + 6.29750 NA intron (NM_198681, intron 2 of 21) intron (NM_198681, intron 2 of 21) 2352 NM_001265593 57449 Hs.284232 NM_020631 HPRD:11104 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology domain containing, family G (with RhoGef domain) member 5 protein-coding Atac153_MAPQ30_peak_4240 chr21 26452345 26452345 + 6.29750 NA Intergenic LTR16A|LTR|ERVL 239481 NR_046198 339622 Hs.616316 NR_046198 ENSG00000226983 LOC339622 - uncharacterized LOC339622 ncRNA Atac153_MAPQ30_peak_1883 chr13 113411532 113411532 + 6.29750 NA intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) -2487 NR_046661 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4113 chr20 42167862 42167862 + 6.29750 NA intron (NM_032107, intron 19 of 21) intron (NM_032107, intron 19 of 21) -19773 NM_170693 10110 Hs.300863 NM_016276 HPRD:06348 SGK2 H-SGK2|dJ138B7.2 serum/glucocorticoid regulated kinase 2 protein-coding Atac153_MAPQ30_peak_2587 chr16 81496713 81496713 + 6.29750 NA intron (NM_198390, intron 1 of 20) intron (NM_198390, intron 1 of 20) 17938 NM_198390 80790 Hs.594095 NM_030629 HPRD:10839 CMIP TCMIP c-Maf inducing protein protein-coding Atac153_MAPQ30_peak_4292 chr21 42506717 42506717 + 6.29750 NA Intergenic Intergenic 13274 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA Atac153_MAPQ30_peak_3830 chr2 201534924 201534924 + 6.29750 NA intron (NM_001159, intron 34 of 34) intron (NM_001159, intron 34 of 34) -25522 NR_001557 344454 Hs.148269 NR_001557 AOX2P AOH2|AOX2 aldehyde oxidase 2 pseudogene pseudo Atac153_MAPQ30_peak_4371 chr22 26982470 26982470 + 6.29750 NA intron (NM_003595, intron 1 of 6) AluJo|SINE|Alu 3619 NM_003595 8459 Hs.632768 NM_003595 HPRD:07217 TPST2 TANGO13B tyrosylprotein sulfotransferase 2 protein-coding Atac153_MAPQ30_peak_702 chr10 30248493 30248493 + 6.29750 NA Intergenic Intergenic 99995 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 KIAA1462 JCAD KIAA1462 protein-coding Atac153_MAPQ30_peak_1047 chr11 4532698 4532698 + 6.29750 NA Intergenic Intergenic 22589 NM_001005171 390036 Hs.553726 NM_001005171 HPRD:15018 OR52K1 OR11-8 olfactory receptor, family 52, subfamily K, member 1 protein-coding Atac153_MAPQ30_peak_815 chr10 79922994 79922994 + 6.29750 NA Intergenic MLT1I|LTR|ERVL-MaLR -85388 NR_038985 100132987 Hs.55047 NR_038985 ENSG00000230417 LINC00856 - long intergenic non-protein coding RNA 856 ncRNA Atac153_MAPQ30_peak_3856 chr2 216922667 216922667 + 6.29750 NA intron (NM_018441, intron 4 of 7) MLT1K|LTR|ERVL-MaLR 23872 NM_018441 55825 Hs.281680 NM_018441 HPRD:09320 PECR DCRRP|HPDHASE|HSA250303|PVIARL|SDR29C1|TERP peroxisomal trans-2-enoyl-CoA reductase protein-coding Atac153_MAPQ30_peak_4059 chr20 30532866 30532866 + 6.29750 NA 3' UTR (NM_030815, exon 5 of 5) 3' UTR (NM_030815, exon 5 of 5) 7017 NM_030815 81572 Hs.435755 NM_030815 HPRD:17833 PDRG1 C20orf126|PDRG p53 and DNA-damage regulated 1 protein-coding Atac153_MAPQ30_peak_4081 chr20 34781818 34781818 + 6.29750 NA intron (NM_001258331, intron 11 of 19) MIR|SINE|MIR 39156 NM_012156 2036 Hs.437422 NM_012156 HPRD:04193 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1-like 1 protein-coding Atac153_MAPQ30_peak_4353 chr22 23627997 23627997 + 6.29750 NA intron (NM_004327, intron 10 of 22) MER54B|LTR|ERVL 23043 NR_033408 26226 Hs.729589 NR_033408 FBXW4P1 FBW3|FBXW3|SHFM3P1 F-box and WD repeat domain containing 4 pseudogene 1 pseudo Atac153_MAPQ30_peak_6439 chr8 101341143 101341143 + 6.29750 NA intron (NM_001280539, intron 1 of 10) intron (NM_001280539, intron 1 of 10) 7303 NM_001280539 25897 Hs.292882 NM_015435 HPRD:06176 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_4539 chr3 6279762 6279762 + 6.29750 NA Intergenic MSTD-int|LTR|ERVL-MaLR 567374 NR_110123 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA Atac153_MAPQ30_peak_512 chr1 208217161 208217161 + 6.29750 NA intron (NM_025179, intron 20 of 31) intron (NM_025179, intron 20 of 31) -132478 NM_001773 947 Hs.374990 NM_001773 HPRD:00790 CD34 - CD34 molecule protein-coding Atac153_MAPQ30_peak_5561 chr6 3506422 3506422 + 6.29750 NA Intergenic Intergenic -49629 NM_015482 63027 Hs.713588 NM_015482 HPRD:12904 SLC22A23 C6orf85 solute carrier family 22, member 23 protein-coding Atac153_MAPQ30_peak_5027 chr4 10372586 10372586 + 6.29750 NA Intergenic Intergenic 86446 NM_053042 85460 Hs.455089 NM_053042 HPRD:13889 ZNF518B - zinc finger protein 518B protein-coding Atac153_MAPQ30_peak_37 chr1 5781053 5781053 + 6.29750 NA Intergenic Intergenic 141748 NR_039838 100616421 NR_039838 miRBase:MI0017322 MIR4689 - microRNA 4689 ncRNA Atac153_MAPQ30_peak_2776 chr17 25893099 25893099 + 6.29750 NA intron (NM_014238, intron 3 of 20) intron (NM_014238, intron 3 of 20) -65075 NR_024043 3965 Hs.81337 NM_002308 LGALS9 HUAT|LGALS9A lectin, galactoside-binding, soluble, 9 protein-coding Atac153_MAPQ30_peak_4017 chr20 19384303 19384303 + 6.29750 NA intron (NM_020689, intron 2 of 16) L2c|LINE|L2 -119063 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA Atac153_MAPQ30_peak_4188 chr20 57541239 57541239 + 6.29750 NA Intergenic FRAM|SINE|Alu -15024 NM_198976 51497 Hs.517148 NM_016397 HPRD:16096 NELFCD NELF-C|NELF-D|TH1|TH1L negative elongation factor complex member C/D protein-coding Atac153_MAPQ30_peak_6575 chr9 2873927 2873927 + 6.29750 NA Intergenic Intergenic -29797 NM_014878 9933 Hs.493309 NM_014878 HPRD:08822 KIAA0020 HA-8|HLA-HA8|PEN|PUF6|XTP5|hPUF-A KIAA0020 protein-coding Atac153_MAPQ30_peak_1416 chr11 134484336 134484336 + 6.29750 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 177960 NR_033852 283177 Hs.504390 NR_033852 LOC283177 - uncharacterized LOC283177 ncRNA Atac153_MAPQ30_peak_4384 chr22 28424995 28424995 + 6.29750 NA intron (NM_001145418, intron 13 of 22) intron (NM_001145418, intron 13 of 22) -108395 NR_036169 100423034 NR_036169 miRBase:MI0014247 MIR3199-1 - microRNA 3199-1 ncRNA Atac153_MAPQ30_peak_513 chr1 208244003 208244003 + 6.29750 NA intron (NM_025179, intron 12 of 31) MIR|SINE|MIR -159320 NM_001773 947 Hs.374990 NM_001773 HPRD:00790 CD34 - CD34 molecule protein-coding Atac153_MAPQ30_peak_430 chr1 172018369 172018369 + 6.29750 NA intron (NM_001136127, intron 10 of 19) MIR|SINE|MIR -89579 NR_036066 100422882 NR_036066 MIR3120 - microRNA 3120 ncRNA Atac153_MAPQ30_peak_4753 chr3 69571163 69571163 + 6.29750 NA Intergenic Intergenic -135708 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding Atac153_MAPQ30_peak_1867 chr13 111038303 111038303 + 6.29750 NA intron (NM_001846, intron 4 of 47) CpG 44998 NR_107040 102465872 NR_107040 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA Atac153_MAPQ30_peak_1688 chr12 124309887 124309887 + 6.29750 NA intron (NM_207437, intron 23 of 77) L1ME1|LINE|L1 62845 NM_207437 196385 Hs.622654 NM_207437 HPRD:13473 DNAH10 - dynein, axonemal, heavy chain 10 protein-coding Atac153_MAPQ30_peak_7223 chrX 134989731 134989731 + 6.29750 NA intron (NM_018666, intron 9 of 19) intron (NM_018666, intron 9 of 19) 13946 NM_018666 55511 Hs.195292 NM_018666 HPRD:02290 SAGE1 CT14|SAGE sarcoma antigen 1 protein-coding Atac153_MAPQ30_peak_5479 chr5 167303319 167303319 + 6.29750 NA intron (NM_001122679, intron 3 of 28) intron (NM_001122679, intron 3 of 28) 356058 NR_109894 101927862 Hs.659376 NR_109894 ENSG00000253978 CTB-178M22.2 - uncharacterized LOC101927862 ncRNA Atac153_MAPQ30_peak_1421 chr12 1500723 1500723 + 6.29750 NA intron (NM_001301248, intron 15 of 18) L1MDa|LINE|L1 -108934 NR_028415 100292680 Hs.391695 NR_028415 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA Atac153_MAPQ30_peak_1743 chr12 132515572 132515572 + 6.29750 NA promoter-TSS (NR_002979) promoter-TSS (NR_002979) -197 NR_002979 677829 Hs.742405 NR_002979 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA Atac153_MAPQ30_peak_6485 chr8 129050896 129050896 + 6.29750 NA intron (NR_003367, intron 4 of 7) intron (NR_003367, intron 4 of 7) -10502 NR_031612 100302175 NR_031612 miRBase:MI0006340 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA Atac153_MAPQ30_peak_3560 chr2 66457607 66457607 + 6.29750 NA Intergenic MER115|DNA|hAT-Tip100 127853 NR_039938 100616464 NR_039938 miRBase:MI0017422 MIR4778 - microRNA 4778 ncRNA Atac153_MAPQ30_peak_2333 chr15 99256341 99256341 + 6.29750 NA intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) 64573 NM_001291858 3480 Hs.643120 NM_000875 HPRD:00932 IGF1R CD221|IGFIR|IGFR|JTK13 insulin-like growth factor 1 receptor protein-coding Atac153_MAPQ30_peak_4473 chr22 45059948 45059948 + 6.29750 NA Intergenic Intergenic -4479 NM_001017528 55615 Hs.102336 NM_015366 HPRD:18696 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 (renal) protein-coding Atac153_MAPQ30_peak_3584 chr2 75277063 75277063 + 6.29750 NA intron (NM_001058, intron 4 of 4) intron (NM_001058, intron 4 of 4) -40876 NR_049796 100846995 NR_049796 miRBase:MI0017866 MIR5000 - microRNA 5000 ncRNA Atac153_MAPQ30_peak_2153 chr15 46285446 46285446 + 6.29750 NA Intergenic Intergenic 358508 NM_021199 58472 Hs.511251 NM_021199 HPRD:18102 SQRDL PRO1975 sulfide quinone reductase-like (yeast) protein-coding Atac153_MAPQ30_peak_6085 chr7 98883907 98883907 + 6.29750 NA intron (NR_002147, intron 8 of 15) AluJb|SINE|Alu 12983 NR_002147 84176 Hs.621401 NR_002147 ENSG00000002079 MYH16 MHC20|MYH16P|MYH5 myosin, heavy chain 16 pseudogene pseudo Atac153_MAPQ30_peak_575 chr1 230256042 230256042 + 6.29750 NA intron (NM_004481, intron 1 of 15) intron (NM_004481, intron 1 of 15) 53100 NM_004481 2590 Hs.743964 NM_004481 HPRD:03782 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding Atac153_MAPQ30_peak_5098 chr4 67265814 67265814 + 6.29750 NA Intergenic L1MA3|LINE|L1 -729601 NM_001281767 2044 Hs.654492 NM_004439 HPRD:02474 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding Atac153_MAPQ30_peak_2510 chr16 52906862 52906862 + 6.29750 NA Intergenic Intergenic -182083 NM_025134 80205 Hs.59159 NM_025134 HPRD:08570 CHD9 AD013|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding Atac153_MAPQ30_peak_988 chr10 130184295 130184295 + 6.29750 NA Intergenic L1MB3|LINE|L1 100081 NR_120619 101927381 Hs.523342 NR_120619 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA Atac153_MAPQ30_peak_4552 chr3 10511852 10511852 + 6.29750 NA intron (NM_001001331, intron 1 of 22) intron (NM_001001331, intron 1 of 22) 35416 NM_001001331 491 Hs.268942 NM_001683 HPRD:00160 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase, Ca++ transporting, plasma membrane 2 protein-coding Atac153_MAPQ30_peak_1482 chr12 31030747 31030747 + 6.29750 NA Intergenic Intergenic -49091 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding Atac153_MAPQ30_peak_4 chr1 834774 834774 + 6.29750 NA Intergenic Intergenic 20298 NR_026874 100130417 Hs.200644 NM_175912 LOC100130417 - uncharacterized LOC100130417 ncRNA Atac153_MAPQ30_peak_5089 chr4 57178806 57178806 + 6.29750 NA intron (NM_020722, intron 6 of 10) L2c|LINE|L2 74868 NM_001286669 132949 Hs.104347 NM_181806 HPRD:12398 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding Atac153_MAPQ30_peak_6213 chr7 155380822 155380822 + 6.29750 NA Intergenic Intergenic -54283 NM_001103176 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding Atac153_MAPQ30_peak_445 chr1 178736279 178736279 + 6.29750 NA intron (NM_001286247, intron 1 of 18) L1PA15|LINE|L1 41997 NM_152663 55103 Hs.632485 NM_018037 HPRD:15206 RALGPS2 dJ595C2.1 Ral GEF with PH domain and SH3 binding motif 2 protein-coding Atac153_MAPQ30_peak_7031 chrX 50298963 50298963 + 6.29750 NA Intergenic Intergenic -85226 NM_001013742 139189 Hs.38132 NM_001013742 DGKK - diacylglycerol kinase, kappa protein-coding Atac153_MAPQ30_peak_2452 chr16 26373377 26373377 + 6.29750 NA Intergenic L1MB1|LINE|L1 670030 NM_006040 9951 Hs.655275 NM_006040 HPRD:04960 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 protein-coding Atac153_MAPQ30_peak_2610 chr16 85263737 85263737 + 6.29750 NA Intergenic MIRb|SINE|MIR -52827 NR_038859 197196 Hs.679002 NM_153238 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA Atac153_MAPQ30_peak_5619 chr6 26140555 26140555 + 6.29750 NA Intergenic Intergenic -16004 NM_005321 3008 Hs.248133 NM_005321 HPRD:07513 HIST1H1E H1.4|H1E|H1F4|H1s-4|dJ221C16.5 histone cluster 1, H1e protein-coding Atac153_MAPQ30_peak_5805 chr6 146402095 146402095 + 6.29750 NA intron (NM_001278065, intron 2 of 9) intron (NM_001278065, intron 2 of 9) 51761 NM_001278064 2911 Hs.32945 NM_000838 HPRD:05129 GRM1 GPRC1A|MGLU1|MGLUR1|PPP1R85|SCAR13 glutamate receptor, metabotropic 1 protein-coding Atac153_MAPQ30_peak_3772 chr2 150147642 150147642 + 6.29750 NA Intergenic Intergenic -38857 NM_001195685 130574 Hs.21929 NM_194317 HPRD:14676 LYPD6 - LY6/PLAUR domain containing 6 protein-coding Atac153_MAPQ30_peak_255 chr1 49151223 49151223 + 6.29750 NA intron (NM_032785, intron 6 of 13) intron (NM_032785, intron 6 of 13) 91324 NM_024603 79656 Hs.475348 NM_024603 BEND5 C1orf165 BEN domain containing 5 protein-coding Atac153_MAPQ30_peak_5940 chr7 27345104 27345104 + 6.29750 NA Intergenic Intergenic -58256 NR_120507 101410536 Hs.687800 NR_120507 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA Atac153_MAPQ30_peak_4760 chr3 73148658 73148658 + 6.29750 NA Intergenic MER5A|DNA|hAT-Charlie 37848 NM_018029 55096 Hs.658858 NM_018029 HPRD:07654 EBLN2 EBLN-2 endogenous Bornavirus-like nucleoprotein 2 protein-coding Atac153_MAPQ30_peak_6573 chr9 480745 480745 + 6.29750 NA intron (NM_001256876, intron 3 of 15) L3|LINE|CR1 10451 NM_001256876 23189 Hs.306764 NM_015158 HPRD:09651 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding Atac153_MAPQ30_peak_3771 chr2 149284857 149284857 + 6.29750 NA Intergenic Intergenic -117703 NM_015630 26122 Hs.23270 NM_015630 HPRD:13274 EPC2 EPC-LIKE enhancer of polycomb homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_6834 chr9 135450995 135450995 + 6.29750 NA Intergenic Intergenic -6998 NM_020064 56751 Hs.283809 NM_020064 HPRD:05554 BARHL1 - BarH-like homeobox 1 protein-coding Atac153_MAPQ30_peak_3873 chr2 219524824 219524824 + 6.29750 NA promoter-TSS (NM_001105537) promoter-TSS (NM_001105537) 445 NM_001257342 617 Hs.471401 NM_004328 HPRD:04708 BCS1L BCS|BCS1|BJS|FLNMS|GRACILE|Hs.6719|MC3DN1|PTD|h-BCS BC1 (ubiquinol-cytochrome c reductase) synthesis-like protein-coding Atac153_MAPQ30_peak_1312 chr11 111131500 111131500 + 6.29750 NA intron (NM_198498, intron 1 of 3) MLT1D|LTR|ERVL-MaLR 4793 NM_198498 341032 Hs.298685 NM_198498 HPRD:14663 C11orf53 - chromosome 11 open reading frame 53 protein-coding Atac153_MAPQ30_peak_2275 chr15 79707900 79707900 + 6.29750 NA Intergenic Intergenic -16958 NM_015206 23251 Hs.301654 NM_015206 HPRD:17206 KIAA1024 - KIAA1024 protein-coding Atac153_MAPQ30_peak_4224 chr21 11108162 11108162 + 6.29750 NA Intergenic AluJb|SINE|Alu -9225 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding Atac153_MAPQ30_peak_169 chr1 30935341 30935341 + 6.29750 NA Intergenic Intergenic -256278 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1710 chr12 126701816 126701816 + 6.29750 NA Intergenic Intergenic 121278 NR_110053 101927464 Hs.443932 NR_110053 ENSG00000256342 LOC101927464 - uncharacterized LOC101927464 ncRNA Atac153_MAPQ30_peak_1554 chr12 64544291 64544291 + 6.29750 NA Intergenic Intergenic 71785 NM_001300940 144577 Hs.444671 NM_152440 HPRD:08727 C12orf66 - chromosome 12 open reading frame 66 protein-coding Atac153_MAPQ30_peak_1589 chr12 96252023 96252023 + 6.29750 NA promoter-TSS (NM_003095) promoter-TSS (NM_003095) -686 NM_003095 6636 Hs.105465 NM_003095 SNRPF SMF|Sm-F|snRNP-F small nuclear ribonucleoprotein polypeptide F protein-coding Atac153_MAPQ30_peak_738 chr10 46998857 46998857 + 6.29750 NA intron (NM_014696, intron 2 of 2) intron (NM_014696, intron 2 of 2) 5311 NM_014696 9721 Hs.523375 NM_014696 GPRIN2 GRIN2|KIAA0514 G protein regulated inducer of neurite outgrowth 2 protein-coding Atac153_MAPQ30_peak_266 chr1 54155828 54155828 + 6.29750 NA intron (NM_147193, intron 1 of 9) intron (NM_147193, intron 1 of 9) 44049 NM_147193 148979 Hs.306691 NM_147193 HPRD:13581 GLIS1 - GLIS family zinc finger 1 protein-coding Atac153_MAPQ30_peak_2535 chr16 66287776 66287776 + 6.29750 NA Intergenic MLT2B1|LTR|ERVL -112749 NM_001795 1003 Hs.76206 NM_001795 HPRD:03075 CDH5 7B4|CD144 cadherin 5, type 2 (vascular endothelium) protein-coding Atac153_MAPQ30_peak_625 chr1 247496614 247496614 + 6.29750 NA Intergenic Intergenic -1569 NM_032752 84838 Hs.654803 NM_032752 HPRD:15805 ZNF496 NIZP1|ZFP496|ZKSCAN17|ZSCAN49 zinc finger protein 496 protein-coding Atac153_MAPQ30_peak_5004 chr4 7403260 7403260 + 6.29750 NA intron (NM_020777, intron 2 of 26) intron (NM_020777, intron 2 of 26) 33440 NM_001085382 768239 Hs.662523 NM_001085382 ENSG00000178597 PSAPL1 - prosaposin-like 1 (gene/pseudogene) protein-coding Atac153_MAPQ30_peak_2855 chr17 47920473 47920473 + 6.29750 NA intron (NM_170685, intron 2 of 4) L1MC4a|LINE|L1 -2799 NM_001242791 729220 Hs.434138 NM_001242791 FLJ45513 - uncharacterized LOC729220 protein-coding Atac153_MAPQ30_peak_7006 chrX 43740920 43740920 + 6.29750 NA intron (NM_000898, intron 1 of 14) intron (NM_000898, intron 1 of 14) 801 NM_000898 4129 Hs.654473 NM_000898 HPRD:02401 MAOB - monoamine oxidase B protein-coding Atac153_MAPQ30_peak_1639 chr12 111133391 111133391 + 6.29750 NA Intergenic Intergenic -5774 NM_001040107 84329 Hs.211511 NM_032369 HPRD:17507 HVCN1 HV1|VSOP hydrogen voltage-gated channel 1 protein-coding Atac153_MAPQ30_peak_923 chr10 118529275 118529275 + 6.29750 NA Intergenic Intergenic -27190 NM_025015 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock 70kDa protein 12A protein-coding Atac153_MAPQ30_peak_1667 chr12 116071079 116071079 + 6.29750 NA Intergenic LTR16A1|LTR|ERVL 515380 NR_030351 693205 NR_030351 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA Atac153_MAPQ30_peak_871 chr10 98963644 98963644 + 6.29750 NA intron (NR_037909, intron 11 of 14) MIRb|SINE|MIR -17961 NM_003061 6585 Hs.632082 NM_003061 HPRD:04773 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit homolog 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_5931 chr7 25495424 25495424 + 6.29750 NA Intergenic L2b|LINE|L2 -227319 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding Atac153_MAPQ30_peak_6857 chr9 138296594 138296594 + 6.29750 NA Intergenic Intergenic 61499 NM_173520 157927 Hs.559511 NM_173520 ENSG00000178243 C9orf62 - chromosome 9 open reading frame 62 protein-coding Atac153_MAPQ30_peak_4442 chr22 38565683 38565683 + 6.29750 NA intron (NM_001199562, intron 1 of 15) intron (NM_001199562, intron 1 of 15) 12078 NM_001004426 8398 Hs.170479 NM_003560 HPRD:04675 PLA2G6 CaI-PLA2|GVI|INAD1|IPLA2-VIA|NBIA2|NBIA2A|NBIA2B|PARK14|PLA2|PNPLA9|iPLA2|iPLA2beta phospholipase A2, group VI (cytosolic, calcium-independent) protein-coding Atac153_MAPQ30_peak_39 chr1 6055768 6055768 + 6.29750 NA intron (NM_001199861, intron 1 of 15) intron (NM_001199861, intron 1 of 15) -3235 NM_001291593 261734 Hs.462348 NM_015102 HPRD:06238 NPHP4 POC10|SLSN4 nephronophthisis 4 protein-coding Atac153_MAPQ30_peak_2088 chr14 105188497 105188497 + 6.29750 NA Intergenic Intergenic -2037 NM_152328 122622 Hs.592327 NM_152328 HPRD:12433 ADSSL1 - adenylosuccinate synthase like 1 protein-coding Atac153_MAPQ30_peak_2356 chr16 1717754 1717754 + 6.29750 NA intron (NM_020825, intron 16 of 19) intron (NM_020825, intron 16 of 19) -10524 NM_144570 90861 Hs.513261 NM_144570 HPRD:12674 HN1L C16orf34|L11 hematological and neurological expressed 1-like protein-coding Atac153_MAPQ30_peak_2820 chr17 39970764 39970764 + 6.29750 NA intron (NM_021939, intron 1 of 9) intron (NM_021939, intron 1 of 9) 1802 NM_021939 60681 Hs.463035 NM_021939 HPRD:09522 FKBP10 FKBP65|OI11|OI6|PPIASE|hFKBP65 FK506 binding protein 10, 65 kDa protein-coding Atac153_MAPQ30_peak_1275 chr11 77399981 77399981 + 6.29750 NA intron (NM_016578, intron 9 of 15) intron (NM_016578, intron 9 of 15) -51130 NM_001293 1207 Hs.430733 NM_001293 HPRD:03694 CLNS1A CLCI|CLNS1B|ICln chloride channel, nucleotide-sensitive, 1A protein-coding Atac153_MAPQ30_peak_5047 chr4 24059256 24059256 + 6.29750 NA Intergenic Intergenic -167556 NM_013261 10891 Hs.527078 NM_013261 HPRD:05155 PPARGC1A LEM6|PGC-1(alpha)|PGC-1v|PGC1|PGC1A|PPARGC1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha protein-coding Atac153_MAPQ30_peak_3761 chr2 137085092 137085092 + 6.29750 NA Intergenic Intergenic -209367 NM_003467 7852 Hs.593413 NM_003467 HPRD:01217 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM chemokine (C-X-C motif) receptor 4 protein-coding Atac153_MAPQ30_peak_2336 chr15 99465454 99465454 + 6.29750 NA exon (NM_000875, exon 11 of 21) exon (NM_000875, exon 11 of 21) 83431 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I-like protein-coding Atac153_MAPQ30_peak_2013 chr14 88289778 88289778 + 6.28611 NA Intergenic Intergenic 169837 NM_001201401 2581 Hs.513439 NM_000153 HPRD:06057 GALC - galactosylceramidase protein-coding Atac153_MAPQ30_peak_6422 chr8 95956823 95956823 + 6.28611 NA intron (NM_033285, intron 1 of 3) intron (NM_033285, intron 1 of 3) 4792 NM_033285 94241 Hs.492261 NM_033285 HPRD:09367 TP53INP1 SIP|TP53DINP1|TP53INP1A|TP53INP1B|Teap|p53DINP1 tumor protein p53 inducible nuclear protein 1 protein-coding Atac153_MAPQ30_peak_4232 chr21 11145697 11145697 + 6.21959 NA Intergenic Intergenic -46760 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding Atac153_MAPQ30_peak_5480 chr5 167361724 167361724 + 6.21164 NA intron (NM_001122679, intron 3 of 28) intron (NM_001122679, intron 3 of 28) 297653 NR_109894 101927862 Hs.659376 NR_109894 ENSG00000253978 CTB-178M22.2 - uncharacterized LOC101927862 ncRNA Atac153_MAPQ30_peak_2108 chr15 27584981 27584981 + 6.21164 NA intron (NM_033223, intron 5 of 9) intron (NM_033223, intron 5 of 9) -178515 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 LOC101928869 - uncharacterized LOC101928869 ncRNA Atac153_MAPQ30_peak_603 chr1 236304288 236304288 + 6.21164 NA Intergenic L2c|LINE|L2 -1544 NM_003272 7107 Hs.498160 NM_003272 HPRD:06878 GPR137B TM7SF1 G protein-coupled receptor 137B protein-coding Atac153_MAPQ30_peak_1604 chr12 104682577 104682577 + 6.21164 NA intron (NM_001261445, intron 1 of 14) intron (NM_001261445, intron 1 of 14) 2117 NM_182729 7296 Hs.654922 NM_003330 HPRD:03068 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding Atac153_MAPQ30_peak_5395 chr5 131973748 131973748 + 6.21164 NA intron (NM_005732, intron 22 of 24) intron (NM_005732, intron 22 of 24) -20117 NM_002188 3596 Hs.845 NM_002188 HPRD:00981 IL13 IL-13|P600 interleukin 13 protein-coding Atac153_MAPQ30_peak_6308 chr8 21416033 21416033 + 6.21164 NA Intergenic MIR|SINE|MIR 230313 NM_001495 2675 Hs.441202 NM_001495 HPRD:11801 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding Atac153_MAPQ30_peak_307 chr1 94807912 94807912 + 6.21164 NA Intergenic Intergenic -76021 NM_002858 5825 Hs.700576 NM_002858 HPRD:01368 ABCD3 ABC43|PMP70|PXMP1|ZWS2 ATP-binding cassette, sub-family D (ALD), member 3 protein-coding Atac153_MAPQ30_peak_3806 chr2 177646749 177646749 + 6.21164 NA Intergenic Intergenic 144267 NR_110599 102724224 Hs.663125 NR_110599 LOC102724224 - uncharacterized LOC102724224 ncRNA Atac153_MAPQ30_peak_5041 chr4 21175221 21175221 + 6.19224 NA intron (NM_147182, intron 2 of 8) MIR3|SINE|MIR 130308 NM_147183 80333 Hs.655705 NM_025221 HPRD:12184 KCNIP4 CALP|KCHIP4 Kv channel interacting protein 4 protein-coding Atac153_MAPQ30_peak_5961 chr7 34692839 34692839 + 6.19224 NA intron (NR_033664, intron 2 of 4) MSTB|LTR|ERVL-MaLR -5012 NM_001300934 387129 Hs.652373 NM_207172 HPRD:10547 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding Atac153_MAPQ30_peak_1048 chr11 5025637 5025637 + 6.09174 NA Intergenic Intergenic 5424 NM_001004755 119682 Hs.553559 NM_001004755 HPRD:11810 OR51L1 OR11-31 olfactory receptor, family 51, subfamily L, member 1 protein-coding Atac153_MAPQ30_peak_2532 chr16 62052497 62052497 + 6.08796 NA intron (NM_001796, intron 2 of 11) intron (NM_001796, intron 2 of 11) 18242 NM_001796 1006 Hs.368322 NM_001796 HPRD:04306 CDH8 Nbla04261 cadherin 8, type 2 protein-coding Atac153_MAPQ30_peak_1810 chr13 48408099 48408099 + 6.08796 NA Intergenic Intergenic 167363 NM_003850 8803 Hs.743361 NM_003850 HPRD:06798 SUCLA2 A-BETA|MTDPS5|SCS-betaA succinate-CoA ligase, ADP-forming, beta subunit protein-coding Atac153_MAPQ30_peak_2596 chr16 82673001 82673001 + 6.08796 NA exon (NM_001220488, exon 2 of 15) exon (NM_001220488, exon 2 of 15) 12602 NM_001220488 1012 Hs.654386 NM_001257 HPRD:03219 CDH13 CDHH|P105 cadherin 13 protein-coding Atac153_MAPQ30_peak_5768 chr6 119402211 119402211 + 5.99857 NA intron (NM_001288576, intron 1 of 15) MSTA|LTR|ERVL-MaLR -2399 NM_024581 79632 Hs.443789 NM_024581 HPRD:09856 FAM184A C6orf60 family with sequence similarity 184, member A protein-coding Atac153_MAPQ30_peak_1460 chr12 12655200 12655200 + 5.98899 NA intron (NM_030640, intron 3 of 6) intron (NM_030640, intron 3 of 6) 60248 NM_030640 80824 Hs.536535 NM_030640 DUSP16 MKP-7|MKP7 dual specificity phosphatase 16 protein-coding Atac153_MAPQ30_peak_1937 chr14 60002539 60002539 + 5.98899 NA intron (NM_001164399, intron 13 of 19) ERV3-16A3_LTR|LTR|ERVL 41010 NM_001164399 729665 Hs.29706 NM_001164399 ENSG00000151838 CCDC175 C14orf38|c14_5395 coiled-coil domain containing 175 protein-coding Atac153_MAPQ30_peak_913 chr10 114413285 114413285 + 5.98899 NA intron (NM_145206, intron 5 of 7) MIRb|SINE|MIR 19356 NR_036177 100422909 NR_036177 MIR4295 - microRNA 4295 ncRNA Atac153_MAPQ30_peak_4784 chr3 109829976 109829976 + 5.92987 NA Intergenic L2a|LINE|L2 701139 NR_109841 401082 Hs.477089 NM_001145553 LINC01205 - long intergenic non-protein coding RNA 1205 ncRNA Atac153_MAPQ30_peak_900 chr10 107874983 107874983 + 5.88768 NA Intergenic L1PA10|LINE|L1 -294892 NR_120625 101927549 Hs.556885 NR_120625 ENSG00000229466 LOC101927549 - uncharacterized LOC101927549 ncRNA Atac153_MAPQ30_peak_6666 chr9 86189671 86189671 + 5.88768 NA Intergenic Intergenic -36323 NM_174938 257019 Hs.127535 NM_174938 HPRD:07402 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Atac153_MAPQ30_peak_1563 chr12 70132165 70132165 + 5.79253 NA promoter-TSS (NM_022456) promoter-TSS (NM_022456) 183 NR_110072 101928002 Hs.569096 NR_110072 ENSG00000247131 LOC101928002 - uncharacterized LOC101928002 ncRNA Atac153_MAPQ30_peak_6149 chr7 132498696 132498696 + 5.79253 NA intron (NM_017812, intron 6 of 7) UCON2|Unknown|Unknown 165143 NR_046323 286023 Hs.671875 NM_173682 HPRD:08276 FLJ40288 - uncharacterized FLJ40288 ncRNA Atac153_MAPQ30_peak_2287 chr15 81899252 81899252 + 5.79253 NA Intergenic Intergenic -232834 NM_001080532 342125 Hs.253489 NM_001080532 TMC3 - transmembrane channel-like 3 protein-coding Atac153_MAPQ30_peak_3146 chr18 73168022 73168022 + 5.79253 NA Intergenic Intergenic -28433 NM_001037331 284274 Hs.666744 NM_001037331 SMIM21 C18orf62 small integral membrane protein 21 protein-coding Atac153_MAPQ30_peak_318 chr1 110156175 110156175 + 5.78082 NA promoter-TSS (NM_005272) promoter-TSS (NM_005272) -470 NM_005272 2780 Hs.36973 NM_005272 HPRD:00762 GNAT2 ACHM4|GNATC guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 protein-coding Atac153_MAPQ30_peak_3222 chr19 12489210 12489210 + 5.78082 NA Intergenic Tigger7|DNA|TcMar-Tigger -12735 NM_030824 79973 Hs.253193 NM_030824 HPRD:15795 ZNF442 - zinc finger protein 442 protein-coding Atac153_MAPQ30_peak_6669 chr9 86894971 86894971 + 5.69888 NA exon (NM_001199633, exon 16 of 18) exon (NM_001199633, exon 16 of 18) 60723 NM_001199633 64078 Hs.535966 NM_022127 HPRD:12200 SLC28A3 CNT3 solute carrier family 28 (concentrative nucleoside transporter), member 3 protein-coding Atac153_MAPQ30_peak_5386 chr5 126709537 126709537 + 5.69888 NA intron (NM_001256545, intron 5 of 24) LTR41|LTR|ERVL 83081 NM_032446 84466 Hs.438709 NM_032446 HPRD:14384 MEGF10 EMARDD multiple EGF-like-domains 10 protein-coding Atac153_MAPQ30_peak_5927 chr7 24349382 24349382 + 5.66623 NA Intergenic L2b|LINE|L2 25575 NM_000905 4852 Hs.1832 NM_000905 HPRD:01214 NPY PYY4 neuropeptide Y protein-coding Atac153_MAPQ30_peak_3679 chr2 115849325 115849325 + 5.60571 NA intron (NM_001178037, intron 1 of 25) intron (NM_001178037, intron 1 of 25) 27078 NM_001178037 57628 Hs.580539 NM_020868 HPRD:07083 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl-peptidase 10 (non-functional) protein-coding Atac153_MAPQ30_peak_901 chr10 107970916 107970916 + 5.60571 NA Intergenic LTR16E2|LTR|ERVL -390825 NR_120625 101927549 Hs.556885 NR_120625 ENSG00000229466 LOC101927549 - uncharacterized LOC101927549 ncRNA Atac153_MAPQ30_peak_4226 chr21 11113325 11113325 + 5.59322 NA Intergenic Intergenic -14388 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding Atac153_MAPQ30_peak_2557 chr16 70194630 70194630 + 5.58375 NA 3' UTR (NM_017990, exon 19 of 19) 3' UTR (NM_017990, exon 19 of 19) -13298 NM_173619 283971 Hs.556045 NM_173619 HPRD:14587 CLEC18C MRCL|MRCL3 C-type lectin domain family 18, member C protein-coding Atac153_MAPQ30_peak_3010 chr18 9552628 9552628 + 5.58375 NA intron (NR_052003, intron 16 of 19) L1MB5|LINE|L1 61977 NM_005134 9989 Hs.743236 NM_005134 ENSG00000154845 PPP4R1 MEG1|PP4(Rmeg)|PP4R1 protein phosphatase 4, regulatory subunit 1 protein-coding Atac153_MAPQ30_peak_3262 chr19 29520230 29520230 + 5.58375 NA Intergenic Intergenic 26768 NR_040036 100505835 Hs.176539 NR_040036 ENSG00000267014 LOC100505835 - uncharacterized LOC100505835 ncRNA Atac153_MAPQ30_peak_5080 chr4 53915429 53915429 + 5.58375 NA intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 186934 NM_023940 65997 Hs.8035 NM_023940 HPRD:15216 RASL11B - RAS-like, family 11, member B protein-coding Atac153_MAPQ30_peak_6197 chr7 151180056 151180056 + 5.58375 NA intron (NM_005614, intron 3 of 7) intron (NM_005614, intron 3 of 7) 36954 NM_005614 6009 Hs.283521 NM_005614 HPRD:03188 RHEB RHEB2 Ras homolog enriched in brain protein-coding Atac153_MAPQ30_peak_850 chr10 88178588 88178588 + 5.51995 NA Intergenic L1ME3C|LINE|L1 -52338 NM_017551 2894 Hs.530653 NM_017551 HPRD:17078 GRID1 GluD1 glutamate receptor, ionotropic, delta 1 protein-coding Atac153_MAPQ30_peak_5775 chr6 125326463 125326463 + 5.51995 NA intron (NR_104440, intron 2 of 6) intron (NR_104440, intron 2 of 6) 21953 NR_104440 154214 Hs.368639 NM_152553 HPRD:17125 RNF217 C6orf172|IBRDC1|dJ84N20.1 ring finger protein 217 protein-coding Atac153_MAPQ30_peak_416 chr1 163024220 163024220 + 5.51781 NA Intergenic LTR16A2|LTR|ERVL -14176 NM_001102445 5999 Hs.386726 NM_005613 HPRD:03947 RGS4 RGP4|SCZD9 regulator of G-protein signaling 4 protein-coding Atac153_MAPQ30_peak_2286 chr15 81798744 81798744 + 5.42629 NA Intergenic L2b|LINE|L2 -132326 NM_001080532 342125 Hs.253489 NM_001080532 TMC3 - transmembrane channel-like 3 protein-coding Atac153_MAPQ30_peak_5728 chr6 86844289 86844289 + 5.42629 NA Intergenic L1PB1|LINE|L1 -455838 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG|bA33E24.2 small nucleolar RNA host gene 5 (non-protein coding) ncRNA Atac153_MAPQ30_peak_3823 chr2 198123561 198123561 + 5.42629 NA intron (NR_046837, intron 5 of 5) L1MB3|LINE|L1 43682 NR_046837 101927547 Hs.687027 NR_046837 ANKRD44-IT1 - ANKRD44 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_6399 chr8 65755935 65755935 + 5.42629 NA Intergenic FAM|SINE|Alu -44587 NM_004820 9420 Hs.667720 NM_004820 HPRD:04753 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450, family 7, subfamily B, polypeptide 1 protein-coding Atac153_MAPQ30_peak_1005 chr10 132050430 132050430 + 5.42629 NA Intergenic MLT1C|LTR|ERVL-MaLR 115791 NM_001199868 10539 Hs.42644 NM_006541 HPRD:10153 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding Atac153_MAPQ30_peak_2008 chr14 84112581 84112581 + 5.42629 NA Intergenic Intergenic -1747642 NR_102737 100996280 Hs.135735 NR_102737 ENSG00000259107 LINC00911 - long intergenic non-protein coding RNA 911 ncRNA Atac153_MAPQ30_peak_2961 chr17 78678021 78678021 + 5.42629 NA intron (NM_020761, intron 3 of 33) intron (NM_020761, intron 3 of 33) 101411 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA Atac153_MAPQ30_peak_3138 chr18 69699510 69699510 + 5.42629 NA Intergenic L1MA2|LINE|L1 -453318 NR_038326 100505776 Hs.202072 NR_038325 ENSG00000260676 LOC100505776 - uncharacterized LOC100505776 ncRNA Atac153_MAPQ30_peak_2767 chr17 21305782 21305782 + 5.42629 NA intron (NM_021012, intron 1 of 2) intron (NM_021012, intron 1 of 2) -2666 NM_001194958 100134444 Hs.200629 NM_001194958 KCNJ18 KIR2.6|TTPP2 potassium inwardly-rectifying channel, subfamily J, member 18 protein-coding Atac153_MAPQ30_peak_6460 chr8 119723965 119723965 + 5.42629 NA intron (NR_038210, intron 3 of 4) intron (NR_038210, intron 3 of 4) -89731 NR_109794 401474 Hs.359393 NM_207506 HPRD:15293 SAMD12 - sterile alpha motif domain containing 12 protein-coding Atac153_MAPQ30_peak_5137 chr4 110793479 110793479 + 5.42629 NA TTS (NM_198506) TTS (NM_198506) 24139 NM_198506 345193 Hs.308127 NM_198506 HPRD:13495 LRIT3 CSNB1F|FIGLER4 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3 protein-coding Atac153_MAPQ30_peak_1578 chr12 92967086 92967086 + 5.42629 NA Intergenic MIRb|SINE|MIR -129533 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000214215 C12orf74 - chromosome 12 open reading frame 74 protein-coding Atac153_MAPQ30_peak_3747 chr2 133032651 133032651 + 5.42611 NA Intergenic Intergenic -17109 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_6967 chrX 31104291 31104291 + 5.39242 NA Intergenic L2c|LINE|L2 -14121 NM_031894 53940 Hs.333125 NM_031894 HPRD:02254 FTHL17 CT38 ferritin, heavy polypeptide-like 17 protein-coding Atac153_MAPQ30_peak_7156 chrX 109280494 109280494 + 5.39242 NA intron (NM_032227, intron 2 of 6) intron (NM_032227, intron 2 of 6) 34152 NM_032227 84187 Hs.496572 NM_017698 HPRD:06539 TMEM164 bB360B22.3 transmembrane protein 164 protein-coding Atac153_MAPQ30_peak_461 chr1 185291455 185291455 + 5.39242 NA Intergenic MER20|DNA|hAT-Charlie -4994 NM_006469 10625 Hs.497183 NM_006469 HPRD:10004 IVNS1ABP FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP influenza virus NS1A binding protein protein-coding Atac153_MAPQ30_peak_3297 chr19 38687622 38687622 + 5.39242 NA intron (NM_015073, intron 18 of 21) MIR|SINE|MIR 27268 NM_001289978 8193 Hs.631576 NM_004647 HPRD:03393 DPF1 BAF45b|NEUD4|neuro-d4 D4, zinc and double PHD fingers family 1 protein-coding Atac153_MAPQ30_peak_4759 chr3 72377502 72377502 + 5.39242 NA Intergenic L2b|LINE|L2 118272 NM_012234 23429 Hs.7910 NM_012234 RYBP AAP1|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding Atac153_MAPQ30_peak_2907 chr17 65895350 65895350 + 5.39242 NA intron (NM_182641, intron 7 of 27) intron (NM_182641, intron 7 of 27) 73570 NM_182641 2186 Hs.444200 NM_004459 HPRD:03490 BPTF FAC1|FALZ|NURF301 bromodomain PHD finger transcription factor protein-coding Atac153_MAPQ30_peak_4056 chr20 29652612 29652612 + 5.39242 NA Intergenic AluJo|SINE|Alu -14474 NR_045115 140678 Hs.653099 NR_045115 MLLT10P1 MLLT10L|bA348I14.3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 pseudogene 1 pseudo Atac153_MAPQ30_peak_4790 chr3 112969752 112969752 + 5.39242 NA intron (NM_033254, intron 4 of 19) intron (NM_033254, intron 4 of 19) 38377 NM_033254 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding Atac153_MAPQ30_peak_6994 chrX 39911465 39911465 + 5.39242 NA exon (NM_001123383, exon 15 of 15) exon (NM_001123383, exon 15 of 15) 45254 NM_017745 54880 Hs.659681 NM_017745 HPRD:06458 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding Atac153_MAPQ30_peak_7078 chrX 68084549 68084549 + 5.39242 NA Intergenic MIR|SINE|MIR 35709 NM_004429 1947 Hs.144700 NM_004429 HPRD:02072 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin-B1 protein-coding Atac153_MAPQ30_peak_1945 chr14 63740549 63740549 + 5.39242 NA intron (NM_020663, intron 2 of 4) intron (NM_020663, intron 2 of 4) 45044 NM_145171 122876 Hs.375028 NM_145171 GPHB5 B5|GPB5|ZLUT1 glycoprotein hormone beta 5 protein-coding Atac153_MAPQ30_peak_468 chr1 200039457 200039457 + 5.39242 NA intron (NM_205860, intron 5 of 7) intron (NM_205860, intron 5 of 7) 27504 NM_001276464 2494 Hs.33446 NM_003822 HPRD:06830 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5, group A, member 2 protein-coding Atac153_MAPQ30_peak_5177 chr4 163982911 163982911 + 5.39242 NA Intergenic Intergenic 105162 NM_138386 92345 Hs.129095 NM_138386 HPRD:10054 NAF1 - nuclear assembly factor 1 ribonucleoprotein protein-coding Atac153_MAPQ30_peak_707 chr10 32504058 32504058 + 5.39242 NA Intergenic AluJb|SINE|Alu 131918 NM_001272019 80314 Hs.167805 NM_025209 HPRD:09941 EPC1 Epl1 enhancer of polycomb homolog 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_6714 chr9 98141350 98141350 + 5.39242 NA Intergenic AluJr|SINE|Alu -61359 NM_001243744 2176 Hs.494529 NM_000136 HPRD:01967 FANCC FA3|FAC|FACC Fanconi anemia, complementation group C protein-coding Atac153_MAPQ30_peak_6633 chr9 72116208 72116208 + 5.39242 NA intron (NM_001163, intron 2 of 12) intron (NM_001163, intron 2 of 12) 171067 NM_001163 320 Hs.171939 NM_001163 HPRD:03879 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta (A4) precursor protein-binding, family A, member 1 protein-coding Atac153_MAPQ30_peak_1431 chr12 3165858 3165858 + 5.39242 NA Intergenic MER5A|DNA|hAT-Charlie -20663 NM_001168320 10867 Hs.504517 NM_006675 HPRD:14823 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding Atac153_MAPQ30_peak_527 chr1 214084952 214084952 + 5.39242 NA Intergenic Intergenic -13140 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA Atac153_MAPQ30_peak_1059 chr11 6480562 6480562 + 5.39242 NA intron (NM_001248007, intron 1 of 10) intron (NM_001248007, intron 1 of 10) 14652 NM_006458 10612 Hs.591992 NM_006458 ENSG00000110171 TRIM3 BERP|HAC1|RNF22|RNF97 tripartite motif containing 3 protein-coding Atac153_MAPQ30_peak_1264 chr11 73359266 73359266 + 5.39242 NA promoter-TSS (NM_001130036) promoter-TSS (NM_001130036) -469 NM_001130036 58473 Hs.445489 NM_021200 HPRD:09630 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing, family B (evectins) member 1 protein-coding Atac153_MAPQ30_peak_1023 chr10 134215553 134215553 + 5.39242 NA intron (NM_001098637, intron 1 of 2) intron (NM_001098637, intron 1 of 2) 4851 NM_001098637 170394 Hs.527751 NM_138499 HPRD:11465 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding Atac153_MAPQ30_peak_4671 chr3 48697362 48697362 + 5.39242 NA exon (NM_001407, exon 1 of 35) exon (NM_001407, exon 1 of 35) 2986 NM_001407 1951 Hs.631926 NM_001407 HPRD:09179 CELSR3 CDHF11|EGFL1|FMI1|HFMI1|MEGF2|RESDA1 cadherin, EGF LAG seven-pass G-type receptor 3 protein-coding Atac153_MAPQ30_peak_1356 chr11 120146623 120146623 + 5.39242 NA intron (NM_014352, intron 3 of 12) intron (NM_014352, intron 3 of 12) -9982 NR_038829 649133 Hs.568902 NR_038829 ENSG00000259541 LOC649133 - uncharacterized LOC649133 ncRNA Atac153_MAPQ30_peak_2660 chr17 2902699 2902699 + 5.39242 NA intron (NM_015085, intron 14 of 24) Charlie4z|DNA|hAT-Charlie -33510 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA Atac153_MAPQ30_peak_4135 chr20 46523564 46523564 + 5.39242 NA Intergenic D20S16|Satellite|Satellite -88406 NR_109942 101060004 Hs.129970 NR_109942 LINC01523 - long intergenic non-protein coding RNA 1523 ncRNA Atac153_MAPQ30_peak_4295 chr21 42863740 42863740 + 5.39242 NA intron (NM_005656, intron 3 of 13) intron (NM_005656, intron 3 of 13) 16252 NM_001135099 7113 Hs.439309 NM_005656 HPRD:03637 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Atac153_MAPQ30_peak_1540 chr12 57014798 57014798 + 5.39242 NA intron (NM_013449, intron 1 of 28) intron (NM_013449, intron 1 of 28) 9317 NM_001300905 11176 Hs.314263 NM_013449 HPRD:10417 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain, 2A protein-coding Atac153_MAPQ30_peak_4581 chr3 14173113 14173113 + 5.39242 NA exon (NM_024334, exon 4 of 12) exon (NM_024334, exon 4 of 12) 6673 NM_024334 79188 Hs.517817 NM_024334 HPRD:15541 TMEM43 ARVC5|ARVD5|EDMD7|LUMA transmembrane protein 43 protein-coding Atac153_MAPQ30_peak_4074 chr20 33842383 33842383 + 5.39242 NA exon (NM_006690, exon 4 of 9) exon (NM_006690, exon 4 of 9) 23577 NR_102706 101410538 Hs.356273 NR_102705 MMP24-AS1 - MMP24 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6193 chr7 150776916 150776916 + 5.39242 NA exon (NM_006712, exon 2 of 10) exon (NM_006712, exon 2 of 10) 1054 NM_001258461 10922 Hs.647094 NM_006712 HPRD:07368 FASTK FAST Fas-activated serine/threonine kinase protein-coding Atac153_MAPQ30_peak_7260 chrX 146402357 146402357 + 5.39242 NA Intergenic MER5A|DNA|hAT-Charlie -36111 NR_030239 574517 NR_030239 miRBase:MI0003199 MIR514A2 MIR514-2|MIRN514-2|hsa-mir-514a-2 microRNA 514a-2 ncRNA Atac153_MAPQ30_peak_5783 chr6 133594213 133594213 + 5.39242 NA intron (NM_001301013, intron 1 of 19) MLT2A1|LTR|ERVL 31576 NM_001301013 2070 Hs.596680 NM_004100 HPRD:04648 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding Atac153_MAPQ30_peak_6715 chr9 98161474 98161474 + 5.39242 NA Intergenic L1MEd|LINE|L1 -64417 NR_038982 100507346 Hs.661847 NR_038982 LOC100507346 - uncharacterized LOC100507346 ncRNA Atac153_MAPQ30_peak_7271 chrX 149010946 149010946 + 5.39242 NA intron (NM_005364, intron 1 of 2) intron (NM_005364, intron 1 of 2) 1005 NM_001166401 4107 Hs.522803 NM_005364 HPRD:02278 MAGEA8 CT1.8|MAGE8 melanoma antigen family A, 8 protein-coding Atac153_MAPQ30_peak_2832 chr17 41877070 41877070 + 5.39242 NA Intergenic Intergenic 19267 NM_001136483 284067 Hs.252707 NM_001136483 C17orf105 - chromosome 17 open reading frame 105 protein-coding Atac153_MAPQ30_peak_1805 chr13 43713199 43713199 + 5.39242 NA intron (NR_047013, intron 1 of 2) intron (NR_047013, intron 1 of 2) 25898 NR_047013 100874159 Hs.633241 NR_047013 LINC00400 - long intergenic non-protein coding RNA 400 ncRNA Atac153_MAPQ30_peak_3859 chr2 217203126 217203126 + 5.39242 NA intron (NM_020814, intron 1 of 3) LTR33A_|LTR|ERVL 33624 NM_020814 57574 Hs.170388 NM_020814 HPRD:16299 MARCH4 MARCH-IV|RNF174 membrane-associated ring finger (C3HC4) 4, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_122 chr1 20494338 20494338 + 5.39242 NA intron (NM_001105572, intron 2 of 2) L2a|LINE|L2 7349 NM_001105572 391013 Hs.512512 NM_001105572 ENSG00000187980 PLA2G2C - phospholipase A2, group IIC protein-coding Atac153_MAPQ30_peak_2690 chr17 7744634 7744634 + 5.39242 NA intron (NM_001080424, intron 1 of 21) intron (NM_001080424, intron 1 of 21) 1399 NM_001080424 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine (K)-specific demethylase 6B protein-coding Atac153_MAPQ30_peak_6774 chr9 119074079 119074079 + 5.39242 NA intron (NM_002581, intron 10 of 21) intron (NM_002581, intron 10 of 21) 88806 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA Atac153_MAPQ30_peak_882 chr10 104233670 104233670 + 5.39242 NA exon (NM_024789, exon 9 of 10) exon (NM_024789, exon 9 of 10) 12500 NM_024789 79847 Hs.309069 NM_024789 HPRD:12589 TMEM180 C10orf77|bA18I14.8 transmembrane protein 180 protein-coding Atac153_MAPQ30_peak_6243 chr8 1402607 1402607 + 5.39242 NA Intergenic Intergenic -46925 NM_001277161 9228 Hs.113287 NM_004745 HPRD:09258 DLGAP2 DAP2|SAPAP2 discs, large (Drosophila) homolog-associated protein 2 protein-coding Atac153_MAPQ30_peak_4528 chr22 51156995 51156995 + 5.39242 NA intron (NM_033517, intron 20 of 21) intron (NM_033517, intron 20 of 21) -19657 NM_001097 49 Hs.370870 NM_001097 HPRD:06342 ACR - acrosin protein-coding Atac153_MAPQ30_peak_3376 chr2 2398797 2398797 + 5.39242 NA Intergenic Intergenic -63752 NM_015025 23040 Hs.434418 NM_015025 HPRD:14797 MYT1L NZF1|ZC2HC4B myelin transcription factor 1-like protein-coding Atac153_MAPQ30_peak_6606 chr9 32709861 32709861 + 5.39242 NA Intergenic L3|LINE|CR1 -73636 NM_212558 401498 Hs.522063 NM_212558 TMEM215 - transmembrane protein 215 protein-coding Atac153_MAPQ30_peak_5910 chr7 6198939 6198939 + 5.39242 NA intron (NM_032172, intron 16 of 17) intron (NM_032172, intron 16 of 17) 54389 NM_032172 84132 Hs.31856 NM_032172 ENSG00000106346 USP42 - ubiquitin specific peptidase 42 protein-coding Atac153_MAPQ30_peak_669 chr10 13158715 13158715 + 5.39242 NA intron (NM_001008211, intron 7 of 15) intron (NM_001008211, intron 7 of 15) 16633 NM_001008211 10133 Hs.332706 NM_021980 HPRD:03891 OPTN ALS12|FIP2|GLC1E|HIP7|HYPL|NRP|TFIIIA-INTP optineurin protein-coding Atac153_MAPQ30_peak_5930 chr7 25329978 25329978 + 5.39242 NA Intergenic Intergenic -61873 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding Atac153_MAPQ30_peak_2683 chr17 6682766 6682766 + 5.39242 NA intron (NM_153230, intron 1 of 3) L2c|LINE|L2 3214 NM_153230 162517 Hs.368364 NM_153230 HPRD:16444 FBXO39 CT144|Fbx39 F-box protein 39 protein-coding Atac153_MAPQ30_peak_6989 chrX 39027542 39027542 + 5.39242 NA Intergenic Intergenic 159074 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA Atac153_MAPQ30_peak_4721 chr3 57132519 57132519 + 5.39242 NA exon (NM_017563, exon 12 of 13) exon (NM_017563, exon 12 of 13) -19183 NM_001128615 50650 Hs.476402 NM_019555 HPRD:12480 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor (GEF) 3 protein-coding Atac153_MAPQ30_peak_3337 chr19 50134316 50134316 + 5.39242 NA Intergenic Intergenic 9084 NM_006270 6237 Hs.515536 NM_006270 HPRD:01299 RRAS - related RAS viral (r-ras) oncogene homolog protein-coding Atac153_MAPQ30_peak_6615 chr9 35599422 35599422 + 5.39242 NA Intergenic MER52A|LTR|ERV1 -5859 NM_006285 7016 Hs.708096 NM_006285 HPRD:03470 TESK1 - testis-specific kinase 1 protein-coding Atac153_MAPQ30_peak_4976 chr4 3633441 3633441 + 5.39242 NA Intergenic Intergenic 46141 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LOC100133461 - uncharacterized LOC100133461 ncRNA Atac153_MAPQ30_peak_1008 chr10 132295085 132295085 + 5.39242 NA Intergenic Intergenic 360446 NM_001199868 10539 Hs.42644 NM_006541 HPRD:10153 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding Atac153_MAPQ30_peak_6982 chrX 38263966 38263966 + 5.39242 NA intron (NM_000531, intron 6 of 9) LTR16A2|LTR|ERVL 52230 NM_000531 5009 Hs.117050 NM_000531 HPRD:02408 OTC OCTD ornithine carbamoyltransferase protein-coding Atac153_MAPQ30_peak_7235 chrX 136683423 136683423 + 5.39242 NA Intergenic L1MA2|LINE|L1 35077 NM_003413 7547 Hs.111227 NM_003413 HPRD:02225 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding Atac153_MAPQ30_peak_4453 chr22 41640368 41640368 + 5.39242 NA TTS (NM_002883) TTS (NM_002883) -3433 NM_138481 150356 Hs.344488 NM_138481 ENSG00000100399 CHADL SLRR4B chondroadherin-like protein-coding Atac153_MAPQ30_peak_6160 chr7 135499925 135499925 + 5.39242 NA Intergenic MLT1F1|LTR|ERVL-MaLR -66331 NM_205855 389558 Hs.55200 NM_205855 HPRD:15613 FAM180A UNQ1940 family with sequence similarity 180, member A protein-coding Atac153_MAPQ30_peak_3594 chr2 85407866 85407866 + 5.39242 NA intron (NM_031283, intron 3 of 11) MIR|SINE|MIR 47283 NM_031283 83439 Hs.516297 NM_031283 HPRD:06874 TCF7L1 TCF-3|TCF3 transcription factor 7-like 1 (T-cell specific, HMG-box) protein-coding Atac153_MAPQ30_peak_7101 chrX 71605753 71605753 + 5.39242 NA intron (NR_051952, intron 8 of 9) intron (NR_051952, intron 8 of 9) -78716 NM_001144886 4435 Hs.40403 NM_004143 HPRD:02146 CITED1 MSG1 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 protein-coding Atac153_MAPQ30_peak_7080 chrX 68158287 68158287 + 5.39242 NA Intergenic Plat_L3|LINE|CR1 109447 NM_004429 1947 Hs.144700 NM_004429 HPRD:02072 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin-B1 protein-coding Atac153_MAPQ30_peak_5172 chr4 155410206 155410206 + 5.39242 NA intron (NM_001142552, intron 1 of 7) intron (NM_001142552, intron 1 of 7) 2671 NM_001142552 54798 Hs.655664 NM_017639 HPRD:10858 DCHS2 CDH27|CDHJ|CDHR7|PCDH23|PCDHJ dachsous cadherin-related 2 protein-coding Atac153_MAPQ30_peak_6294 chr8 19364590 19364590 + 5.39242 NA intron (NR_024040, intron 2 of 9) intron (NR_024040, intron 2 of 9) 95466 NM_001130518 55790 Hs.613729 NM_018371 HPRD:13114 CSGALNACT1 CSGalNAcT-1|ChGn|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding Atac153_MAPQ30_peak_3421 chr2 12474653 12474653 + 5.39242 NA intron (NR_110196, intron 4 of 5) intron (NR_110196, intron 4 of 5) 327411 NR_110196 100506457 Hs.197824 NR_110196 ENSG00000224184 LOC100506457 - uncharacterized LOC100506457 ncRNA Atac153_MAPQ30_peak_4043 chr20 24400294 24400294 + 5.39242 NA Intergenic L2a|LINE|L2 -49541 NM_024893 79953 Hs.124638 NM_024893 HPRD:12766 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding Atac153_MAPQ30_peak_3006 chr18 8794339 8794339 + 5.39242 NA intron (NM_015210, intron 8 of 16) intron (NM_015210, intron 8 of 16) 76970 NM_015210 23255 Hs.707920 NM_015210 HPRD:11110 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding Atac153_MAPQ30_peak_3176 chr19 1086231 1086231 + 5.39242 NA TTS (NM_002695) TTS (NM_002695) 9160 NM_002695 5434 Hs.24301 NM_002695 POLR2E RPABC1|RPB5|XAP4|hRPB25|hsRPB5 polymerase (RNA) II (DNA directed) polypeptide E, 25kDa protein-coding Atac153_MAPQ30_peak_6433 chr8 98265999 98265999 + 5.39242 NA intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) 24177 NM_033512 85453 Hs.173094 NM_033512 HPRD:15576 TSPYL5 - TSPY-like 5 protein-coding Atac153_MAPQ30_peak_6547 chr8 143189878 143189878 + 5.39242 NA Intergenic Intergenic -67822 NR_039682 100616268 NR_039682 miRBase:MI0016823 MIR4472-1 - microRNA 4472-1 ncRNA Atac153_MAPQ30_peak_4514 chr22 49282782 49282782 + 5.39242 NA intron (NR_038944, intron 2 of 6) intron (NR_038944, intron 2 of 6) 20200 NR_038944 100128946 Hs.535676 NR_038944 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA Atac153_MAPQ30_peak_270 chr1 55393625 55393625 + 5.39242 NA Intergenic Intergenic -40704 NM_014762 1718 Hs.498727 NM_014762 HPRD:05916 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding Atac153_MAPQ30_peak_6860 chr9 138708257 138708257 + 5.39242 NA intron (NM_015447, intron 14 of 16) intron (NM_015447, intron 14 of 16) 90748 NM_015447 157922 Hs.522493 NM_015447 HPRD:13001 CAMSAP1 PRO2405|bA100C15.1 calmodulin regulated spectrin-associated protein 1 protein-coding Atac153_MAPQ30_peak_1836 chr13 84740222 84740222 + 5.39242 NA intron (NR_046871, intron 1 of 6) MSTA|LTR|ERVL-MaLR 25485 NR_046871 100874128 Hs.578060 NR_046871 LINC00333 NCRNA00333 long intergenic non-protein coding RNA 333 ncRNA Atac153_MAPQ30_peak_6429 chr8 97311388 97311388 + 5.39242 NA intron (NM_001290225, intron 3 of 10) intron (NM_001290225, intron 3 of 10) 37274 NM_001290225 9791 Hs.292579 NM_014754 PTDSS1 LMHD|PSS1|PSSA phosphatidylserine synthase 1 protein-coding Atac153_MAPQ30_peak_7143 chrX 104014725 104014725 + 5.39242 NA intron (NM_017416, intron 2 of 10) intron (NM_017416, intron 2 of 10) 203729 NM_017416 26280 Hs.675519 NM_017416 HPRD:02231 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein-like 2 protein-coding Atac153_MAPQ30_peak_4700 chr3 52558092 52558092 + 5.39242 NA TTS (NM_022908) TTS (NM_022908) 9701 NM_001134231 64943 Hs.84753 NM_022908 HPRD:07770 NT5DC2 - 5'-nucleotidase domain containing 2 protein-coding Atac153_MAPQ30_peak_6526 chr8 140383950 140383950 + 5.39242 NA Intergenic Intergenic 331349 NR_104210 51305 Hs.493037 NM_001282534 HPRD:16167 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium channel, subfamily K, member 9 protein-coding Atac153_MAPQ30_peak_2323 chr15 93860230 93860230 + 5.39242 NA Intergenic Intergenic -227787 NM_020211 56963 Hs.271277 NM_020211 HPRD:09560 RGMA RGM repulsive guidance molecule family member a protein-coding Atac153_MAPQ30_peak_4500 chr22 47737185 47737185 + 5.39242 NA Intergenic Intergenic 145675 NR_109967 101927722 Hs.589927 NR_109967 ENSG00000218357 LOC101927722 - uncharacterized LOC101927722 ncRNA Atac153_MAPQ30_peak_1840 chr13 95338454 95338454 + 5.39242 NA Intergenic Intergenic 22286 NR_120417 101927248 Hs.626095 NR_120417 LOC101927248 - uncharacterized LOC101927248 ncRNA Atac153_MAPQ30_peak_772 chr10 64219351 64219351 + 5.39242 NA intron (NM_199450, intron 3 of 4) intron (NM_199450, intron 3 of 4) -60856 NM_199452 22891 Hs.22653 NM_014951 HPRD:06380 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding Atac153_MAPQ30_peak_2479 chr16 33293991 33293991 + 5.39242 NA Intergenic (GCTG)n|Simple_repeat|Simple_repeat 4711 NR_033866 390705 Hs.278513 NR_033866 LOC390705 - protein phosphatase 2, regulatory subunit B'', beta pseudogene pseudo Atac153_MAPQ30_peak_2351 chr16 390659 390659 + 5.39242 NA intron (NM_003502, intron 2 of 10) intron (NM_003502, intron 2 of 10) 12017 NM_003502 8312 Hs.592082 NM_003502 HPRD:04819 AXIN1 AXIN|PPP1R49 axin 1 protein-coding Atac153_MAPQ30_peak_1590 chr12 96338006 96338006 + 5.39242 NA intron (NM_152435, intron 1 of 8) intron (NM_152435, intron 1 of 8) 935 NM_152435 144193 Hs.424907 NM_152435 HPRD:14605 AMDHD1 - amidohydrolase domain containing 1 protein-coding Atac153_MAPQ30_peak_3105 chr18 49307189 49307189 + 5.39242 NA Intergenic L3|LINE|CR1 388777 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LOC100287225 - uncharacterized LOC100287225 ncRNA Atac153_MAPQ30_peak_6539 chr8 142406139 142406139 + 5.39242 NA Intergenic Intergenic -25349 NM_007079 11156 Hs.43666 NM_007079 PTP4A3 PRL-3|PRL-R|PRL3 protein tyrosine phosphatase type IVA, member 3 protein-coding Atac153_MAPQ30_peak_1427 chr12 2708256 2708256 + 5.39242 NA intron (NM_001129832, intron 22 of 47) intron (NM_001129832, intron 22 of 47) 73130 NR_046579 100874235 Hs.667644 NR_046579 CACNA1C-AS2 - CACNA1C antisense RNA 2 ncRNA Atac153_MAPQ30_peak_2890 chr17 61903372 61903372 + 5.39242 NA intron (NM_017647, intron 5 of 20) intron (NM_017647, intron 5 of 20) -1398 NM_002805 5705 Hs.79387 NM_002805 HPRD:03400 PSMC5 S8|SUG-1|SUG1|TBP10|TRIP1|p45|p45/SUG proteasome (prosome, macropain) 26S subunit, ATPase, 5 protein-coding Atac153_MAPQ30_peak_6670 chr9 86971342 86971342 + 5.39242 NA intron (NM_022127, intron 1 of 18) intron (NM_022127, intron 1 of 18) 12071 NM_022127 64078 Hs.535966 NM_022127 HPRD:12200 SLC28A3 CNT3 solute carrier family 28 (concentrative nucleoside transporter), member 3 protein-coding Atac153_MAPQ30_peak_1357 chr11 120170862 120170862 + 5.39242 NA intron (NM_014352, intron 5 of 12) intron (NM_014352, intron 5 of 12) -24976 NM_174926 219902 Hs.643516 NM_174926 HPRD:14461 TMEM136 - transmembrane protein 136 protein-coding Atac153_MAPQ30_peak_6297 chr8 20277784 20277784 + 5.39242 NA Intergenic Intergenic 144500 NR_047509 100874051 Hs.385799 NR_047509 ENSG00000253733 LZTS1-AS1 - LZTS1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5051 chr4 25910993 25910993 + 5.39242 NA Intergenic Intergenic -4821 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52 small integral membrane protein 20 protein-coding Atac153_MAPQ30_peak_6201 chr7 151513668 151513668 + 5.39242 NA intron (NM_016203, intron 1 of 15) intron (NM_016203, intron 1 of 15) -1711 NM_001040633 51422 Hs.647072 NM_016203 HPRD:04119 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding Atac153_MAPQ30_peak_2366 chr16 5113069 5113069 + 5.39242 NA intron (NM_152459, intron 1 of 7) MER91B|DNA|hAT-Tip100 3077 NM_001098514 146556 Hs.11782 NM_152459 HPRD:11353 C16orf89 - chromosome 16 open reading frame 89 protein-coding Atac153_MAPQ30_peak_4148 chr20 49073772 49073772 + 5.39242 NA Intergenic MER47A|DNA|TcMar-Tigger -53086 NM_002827 5770 Hs.417549 NM_002827 HPRD:01477 PTPN1 PTP1B protein tyrosine phosphatase, non-receptor type 1 protein-coding Atac153_MAPQ30_peak_1738 chr12 132075515 132075515 + 5.39242 NA Intergenic Intergenic -120117 NM_004592 6433 Hs.308171 NM_004592 HPRD:09055 SFSWAP SFRS8|SWAP splicing factor, suppressor of white-apricot family protein-coding Atac153_MAPQ30_peak_4289 chr21 41502275 41502275 + 5.39242 NA intron (NR_073202, intron 19 of 32) intron (NR_073202, intron 19 of 32) 82083 NR_039917 100616148 NR_039917 MIR4760 - microRNA 4760 ncRNA Atac153_MAPQ30_peak_1354 chr11 119984859 119984859 + 5.39242 NA intron (NM_012101, intron 8 of 8) intron (NM_012101, intron 8 of 8) 24004 NM_012101 23650 Hs.504115 NM_012101 HPRD:10280 TRIM29 ATDC tripartite motif containing 29 protein-coding Atac153_MAPQ30_peak_4705 chr3 53260021 53260021 + 5.39242 NA intron (NR_047580, intron 13 of 13) intron (NR_047580, intron 13 of 13) 30109 NM_001135055 7086 Hs.89643 NM_001064 HPRD:06001 TKT HEL107|TK|TKT1 transketolase protein-coding Atac153_MAPQ30_peak_4925 chr3 183544208 183544208 + 5.39242 NA promoter-TSS (NM_024871) promoter-TSS (NM_024871) -815 NM_024871 79929 Hs.478465 NM_024871 HPRD:07793 MAP6D1 MAPO6D1|SL21 MAP6 domain containing 1 protein-coding Atac153_MAPQ30_peak_3153 chr18 74022652 74022652 + 5.39242 NA Intergenic Intergenic 184494 NM_014643 9658 Hs.436973 NM_014643 ENSG00000101493 ZNF516 HsT287 zinc finger protein 516 protein-coding Atac153_MAPQ30_peak_6699 chr9 95484156 95484156 + 5.39242 NA intron (NM_001003800, intron 3 of 6) intron (NM_001003800, intron 3 of 6) 42927 NM_015250 23299 Hs.436939 NM_015250 HPRD:09826 BICD2 SMALED2|bA526D8.1 bicaudal D homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_1162 chr11 44815143 44815143 + 5.39242 NA intron (NM_130783, intron 1 of 8) MIR|SINE|MIR 29167 NM_130783 90139 Hs.385634 NM_130783 HPRD:17435 TSPAN18 TSPAN tetraspanin 18 protein-coding Atac153_MAPQ30_peak_5491 chr5 170200396 170200396 + 5.39242 NA Intergenic Intergenic -10327 NM_001291985 2568 Hs.26225 NM_014211 HPRD:04105 GABRP - gamma-aminobutyric acid (GABA) A receptor, pi protein-coding Atac153_MAPQ30_peak_5020 chr4 9919588 9919588 + 5.39242 NA intron (NM_001001290, intron 8 of 12) intron (NM_001001290, intron 8 of 12) 103526 NM_020041 56606 Hs.656895 NM_020041 HPRD:05848 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 (facilitated glucose transporter), member 9 protein-coding Atac153_MAPQ30_peak_6021 chr7 55590802 55590802 + 5.39242 NA intron (NM_030796, intron 1 of 4) MIR3|SINE|MIR 14607 NM_001284284 81552 Hs.488307 NM_030796 HPRD:08526 VOPP1 ECOP|GASP vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding Atac153_MAPQ30_peak_5387 chr5 126755036 126755036 + 5.39242 NA intron (NM_001256545, intron 11 of 24) MIR3|SINE|MIR -98265 NM_130809 133619 Hs.483259 NM_130809 HPRD:14052 PRRC1 - proline-rich coiled-coil 1 protein-coding Atac153_MAPQ30_peak_905 chr10 110479637 110479637 + 5.39242 NA Intergenic L1PA17|LINE|L1 -450778 NR_046928 100873762 NR_046928 RNU6-53P RNU6-53 RNA, U6 small nuclear 53, pseudogene snRNA Atac153_MAPQ30_peak_2976 chr17 80663011 80663011 + 5.39242 NA Intergenic Intergenic -6413 NM_006822 10966 Hs.484068 NM_006822 RAB40B RAR|SEC4L RAB40B, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_163 chr1 30331001 30331001 + 5.39242 NA Intergenic Intergenic 179458 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LOC101929406 - uncharacterized LOC101929406 ncRNA Atac153_MAPQ30_peak_5099 chr4 71373396 71373396 + 5.39242 NA Intergenic Intergenic -10893 NM_212557 401138 Hs.453069 NM_212557 HPRD:18270 AMTN UNQ689 amelotin protein-coding Atac153_MAPQ30_peak_7174 chrX 117857294 117857294 + 5.39242 NA Intergenic L2c|LINE|L2 -4265 NM_001560 3597 Hs.496646 NM_001560 HPRD:02125 IL13RA1 CD213A1|IL-13Ra|NR4 interleukin 13 receptor, alpha 1 protein-coding Atac153_MAPQ30_peak_2078 chr14 102687974 102687974 + 5.39242 NA intron (NM_001242416, intron 2 of 2) intron (NM_001242416, intron 2 of 2) 18984 NR_073542 5891 Hs.104119 NM_014226 HPRD:09310 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding Atac153_MAPQ30_peak_45 chr1 7514847 7514847 + 5.39242 NA intron (NM_015215, intron 5 of 22) intron (NM_015215, intron 5 of 22) -316482 NM_004781 9341 Hs.66708 NM_004781 HPRD:04711 VAMP3 CEB vesicle-associated membrane protein 3 protein-coding Atac153_MAPQ30_peak_1588 chr12 96181112 96181112 + 5.39242 NA exon (NM_021229, exon 2 of 10) exon (NM_021229, exon 2 of 10) 3424 NM_021229 59277 Hs.201034 NM_021229 HPRD:10121 NTN4 PRO3091 netrin 4 protein-coding Atac153_MAPQ30_peak_6387 chr8 56897261 56897261 + 5.39242 NA intron (NM_001111097, intron 10 of 12) L2a|LINE|L2 89199 NR_002437 26795 NR_002437 SNORD54 RNU54|U54 small nucleolar RNA, C/D box 54 snoRNA Atac153_MAPQ30_peak_5617 chr6 24924593 24924593 + 5.39242 NA intron (NM_001286446, intron 1 of 13) intron (NM_001286446, intron 1 of 13) 11687 NM_001286445 9750 Hs.559459 NM_014722 HPRD:12881 FAM65B C6orf32|DIFF40|DIFF48|MYONAP|PL48 family with sequence similarity 65, member B protein-coding Atac153_MAPQ30_peak_1655 chr12 114421333 114421333 + 5.39242 NA Intergenic Intergenic -17157 NM_001146699 9904 Hs.7482 NM_016196 HPRD:15225 RBM19 - RNA binding motif protein 19 protein-coding Atac153_MAPQ30_peak_4549 chr3 9835318 9835318 + 5.39242 NA promoter-TSS (NM_001278270) promoter-TSS (NM_001278270) 517 NM_001198780 10093 Hs.323342 NM_005718 HPRD:10368 ARPC4 ARC20|P20-ARC actin related protein 2/3 complex, subunit 4, 20kDa protein-coding Atac153_MAPQ30_peak_6248 chr8 1891817 1891817 + 5.39242 NA intron (NM_014629, intron 26 of 28) intron (NM_014629, intron 26 of 28) -30227 NM_014867 9920 Hs.5333 NM_014867 HPRD:17195 KBTBD11 KLHDC7C kelch repeat and BTB (POZ) domain containing 11 protein-coding Atac153_MAPQ30_peak_2921 chr17 71842617 71842617 + 5.39242 NA Intergenic Intergenic -17941 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA Atac153_MAPQ30_peak_5070 chr4 45587549 45587549 + 5.39242 NA Intergenic L1MA4|LINE|L1 538533 NM_173536 2565 Hs.375051 NM_173536 HPRD:15923 GABRG1 - gamma-aminobutyric acid (GABA) A receptor, gamma 1 protein-coding Atac153_MAPQ30_peak_3295 chr19 38647987 38647987 + 5.39242 NA intron (NM_015073, intron 13 of 21) MIRb|SINE|MIR 66903 NM_001289978 8193 Hs.631576 NM_004647 HPRD:03393 DPF1 BAF45b|NEUD4|neuro-d4 D4, zinc and double PHD fingers family 1 protein-coding Atac153_MAPQ30_peak_3802 chr2 175822474 175822474 + 5.39242 NA intron (NR_038133, intron 1 of 11) intron (NR_038133, intron 1 of 11) 47507 NM_001822 1123 Hs.380138 NM_001822 HPRD:00319 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding Atac153_MAPQ30_peak_5171 chr4 155408111 155408111 + 5.39242 NA intron (NM_001142552, intron 1 of 7) intron (NM_001142552, intron 1 of 7) 4766 NM_001142552 54798 Hs.655664 NM_017639 HPRD:10858 DCHS2 CDH27|CDHJ|CDHR7|PCDH23|PCDHJ dachsous cadherin-related 2 protein-coding Atac153_MAPQ30_peak_6409 chr8 81863413 81863413 + 5.39242 NA Intergenic Intergenic -76397 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding Atac153_MAPQ30_peak_666 chr10 12393767 12393767 + 5.39242 NA intron (NM_020397, intron 1 of 9) intron (NM_020397, intron 1 of 9) 2184 NM_153498 57118 Hs.659517 NM_020397 HPRD:06409 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin-dependent protein kinase ID protein-coding Atac153_MAPQ30_peak_2580 chr16 77413664 77413664 + 5.39242 NA intron (NM_199355, intron 3 of 22) AluSz|SINE|Alu 55347 NM_199355 170692 Hs.188746 NM_139054 HPRD:06333 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif, 18 protein-coding Atac153_MAPQ30_peak_3691 chr2 121336748 121336748 + 5.39242 NA Intergenic Intergenic -112823 NR_027181 84931 Hs.334519 NM_032845 HPRD:08604 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA Atac153_MAPQ30_peak_6849 chr9 137748289 137748289 + 5.39242 NA intron (NR_103451, intron 1 of 1) intron (NR_103451, intron 1 of 1) -5636 NR_039696 100616212 NR_039696 miRBase:MI0016837 MIR3689F - microRNA 3689f ncRNA Atac153_MAPQ30_peak_6742 chr9 110947963 110947963 + 5.39242 NA Intergenic MLT1D|LTR|ERVL-MaLR 670312 NM_006686 10880 Hs.534390 NM_006686 ACTL7B Tact1 actin-like 7B protein-coding Atac153_MAPQ30_peak_6683 chr9 91758839 91758839 + 5.39242 NA intron (NM_016848, intron 1 of 11) intron (NM_016848, intron 1 of 11) 34843 NM_016848 53358 Hs.292737 NM_016848 SHC3 N-Shc|NSHC|RAI|SHCC SHC (Src homology 2 domain containing) transforming protein 3 protein-coding Atac153_MAPQ30_peak_1863 chr13 107912124 107912124 + 5.39242 NA intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) 575682 NR_046848 100874375 Hs.653972 NR_046848 FAM155A-IT1 - FAM155A intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_1484 chr12 31188205 31188205 + 5.39242 NA intron (NR_038927, intron 2 of 2) AluJr4|SINE|Alu -38574 NM_004399 1663 Hs.443960 NM_004399 HPRD:03095 DDX11 CHL1|CHLR1|KRG2|WABS DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 protein-coding Atac153_MAPQ30_peak_4632 chr3 38135409 38135409 + 5.39242 NA intron (NM_007337, intron 12 of 35) intron (NM_007337, intron 12 of 35) 43324 NR_024024 30 Hs.643487 NM_001607 HPRD:06815 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding Atac153_MAPQ30_peak_3893 chr2 229325675 229325675 + 5.39242 NA Intergenic L1PA15|LINE|L1 -279314 NM_030623 80309 Hs.436306 NM_030623 HPRD:18052 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding Atac153_MAPQ30_peak_4386 chr22 29442705 29442705 + 5.39242 NA exon (NM_001206998, exon 6 of 9) exon (NM_001206998, exon 6 of 9) 15202 NM_015370 25770 Hs.50891 NM_015370 HPRD:11031 C22orf31 HS747E2A|bK747E2.1 chromosome 22 open reading frame 31 protein-coding Atac153_MAPQ30_peak_3577 chr2 72234591 72234591 + 5.39242 NA Intergenic Intergenic 140400 NM_001277742 56603 Hs.91546 NM_019885 HPRD:05550 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450, family 26, subfamily B, polypeptide 1 protein-coding Atac153_MAPQ30_peak_6838 chr9 136232992 136232992 + 5.39242 NA intron (NM_001280793, intron 2 of 4) intron (NM_001280793, intron 2 of 4) 9571 NM_001278928 6835 Hs.159448 NM_017503 HPRD:15948 SURF2 SURF-2 surfeit 2 protein-coding Atac153_MAPQ30_peak_2119 chr15 29581467 29581467 + 5.39242 NA intron (NM_015307, intron 2 of 10) L1ME3|LINE|L1 -19447 NM_138704 56160 Hs.94011 NM_138704 HPRD:10503 NDNL2 HCA4|MAGEG1|MAGEL3|NSE3|NSMCE3 necdin-like 2 protein-coding Atac153_MAPQ30_peak_6151 chr7 134008785 134008785 + 5.39242 NA Intergenic L1PB4|LINE|L1 -6958 NM_032826 84912 Hs.490181 NM_032826 HPRD:11578 SLC35B4 YEA|YEA4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4 protein-coding Atac153_MAPQ30_peak_6914 chrX 14725338 14725338 + 5.39242 NA intron (NM_002063, intron 8 of 8) MIRb|SINE|MIR 165846 NM_001018113 2187 Hs.554740 NM_152633 HPRD:06557 FANCB FA2|FAAP90|FAAP95|FAB|FACB Fanconi anemia, complementation group B protein-coding Atac153_MAPQ30_peak_5295 chr5 35193577 35193577 + 5.39242 NA intron (NM_000949, intron 1 of 9) intron (NM_000949, intron 1 of 9) 37114 NM_000949 5618 Hs.368587 NM_000949 HPRD:01457 PRLR HPRL|MFAB|hPRLrI prolactin receptor protein-coding Atac153_MAPQ30_peak_1425 chr12 2457140 2457140 + 5.39242 NA intron (NM_001129832, intron 3 of 47) intron (NM_001129832, intron 3 of 47) 78198 NR_046769 100874370 Hs.653548 NR_046769 CACNA1C-IT3 - CACNA1C intronic transcript 3 (non-protein coding) ncRNA Atac153_MAPQ30_peak_1280 chr11 78472784 78472784 + 5.39242 NA intron (NM_001098816, intron 18 of 33) L1MEd|LINE|L1 -186875 NM_024678 79731 Hs.503389 NM_024678 HPRD:08026 NARS2 SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial (putative) protein-coding Atac153_MAPQ30_peak_1553 chr12 63281607 63281607 + 5.39242 NA intron (NM_020700, intron 1 of 9) L2a|LINE|L2 47058 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent, 1H protein-coding Atac153_MAPQ30_peak_6083 chr7 98251821 98251821 + 5.39242 NA intron (NM_002523, intron 2 of 4) intron (NM_002523, intron 2 of 4) 5224 NM_002523 4885 Hs.3281 NM_002523 HPRD:02853 NPTX2 NARP|NP-II|NP2 neuronal pentraxin II protein-coding Atac153_MAPQ30_peak_1030 chr10 134931191 134931191 + 5.39242 NA intron (NM_001083909, intron 5 of 6) intron (NM_001083909, intron 5 of 6) 15441 NM_001291085 84435 Hs.435183 NM_032422 HPRD:17058 GPR123 - G protein-coupled receptor 123 protein-coding Atac153_MAPQ30_peak_975 chr10 128022982 128022982 + 5.39242 NA intron (NM_001288975, intron 1 of 18) intron (NM_001288975, intron 1 of 18) 54145 NM_001288975 8038 Hs.594351 NM_003474 HPRD:04092 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding Atac153_MAPQ30_peak_927 chr10 120380805 120380805 + 5.39242 NA Intergenic Intergenic -25645 NM_004248 2834 Hs.248119 NM_004248 HPRD:02937 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding Atac153_MAPQ30_peak_3502 chr2 38057074 38057074 + 5.39242 NA promoter-TSS (NR_110011) promoter-TSS (NR_110011) -220 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA Atac153_MAPQ30_peak_3387 chr2 3454677 3454677 + 5.39242 NA intron (NM_016030, intron 6 of 11) intron (NM_016030, intron 6 of 11) 68673 NM_018269 55256 Hs.502773 NM_018269 HPRD:17607 ADI1 APL1|ARD|Fe-ARD|MTCBP1|Ni-ARD|SIPL|mtnD acireductone dioxygenase 1 protein-coding Atac153_MAPQ30_peak_6032 chr7 64349268 64349268 + 5.39242 NA Intergenic Intergenic -14352 NR_003099 10793 Hs.520889 NM_021148 ZNF273 HZF9 zinc finger protein 273 protein-coding Atac153_MAPQ30_peak_4155 chr20 49813096 49813096 + 5.39242 NA Intergenic Intergenic -173421 NM_002237 3755 Hs.118695 NM_002237 HPRD:04809 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel, subfamily G, member 1 protein-coding Atac153_MAPQ30_peak_6440 chr8 101792092 101792092 + 5.39242 NA Intergenic L3|LINE|CR1 -57777 NM_002568 26986 Hs.387804 NM_002568 HPRD:05247 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein, cytoplasmic 1 protein-coding Atac153_MAPQ30_peak_2324 chr15 93896090 93896090 + 5.39242 NA Intergenic L2c|LINE|L2 -263647 NM_020211 56963 Hs.271277 NM_020211 HPRD:09560 RGMA RGM repulsive guidance molecule family member a protein-coding Atac153_MAPQ30_peak_3030 chr18 20844023 20844023 + 5.39242 NA Intergenic Intergenic 108234 NM_138375 91768 Hs.11108 NM_138375 HPRD:16461 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding Atac153_MAPQ30_peak_5039 chr4 20495984 20495984 + 5.39242 NA intron (NM_001289135, intron 9 of 35) L2c|LINE|L2 -33914 NR_029631 407000 NR_029631 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA Atac153_MAPQ30_peak_6265 chr8 6386458 6386458 + 5.39242 NA intron (NM_001118888, intron 1 of 7) intron (NM_001118888, intron 1 of 7) 34326 NM_001118888 285 Hs.583870 NM_001147 HPRD:03563 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding Atac153_MAPQ30_peak_3986 chr20 3667734 3667734 + 5.39242 NA 3' UTR (NM_023068, exon 21 of 21) 3' UTR (NM_023068, exon 21 of 21) -4956 NM_153202 80332 Hs.173716 NM_025220 HPRD:06173 ADAM33 C20orf153|DJ964F7.1 ADAM metallopeptidase domain 33 protein-coding Atac153_MAPQ30_peak_137 chr1 22942204 22942204 + 5.39242 NA Intergenic Intergenic 17655 NR_106742 102466615 NR_106742 MIR6127 hsa-mir-6127 microRNA 6127 ncRNA Atac153_MAPQ30_peak_5889 chr7 1791183 1791183 + 5.39242 NA Intergenic Intergenic -9237 NR_120508 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4049 chr20 24849062 24849062 + 5.39242 NA Intergenic MLT1H|LTR|ERVL-MaLR -80804 NM_003650 8530 Hs.143212 NM_003650 HPRD:04458 CST7 CMAP cystatin F (leukocystatin) protein-coding Atac153_MAPQ30_peak_6629 chr9 71069349 71069349 + 5.39242 NA intron (NM_021965, intron 6 of 10) intron (NM_021965, intron 6 of 10) 86434 NM_153237 169693 Hs.663056 NM_153237 HPRD:18569 TMEM252 C9orf71 transmembrane protein 252 protein-coding Atac153_MAPQ30_peak_5793 chr6 136915139 136915139 + 5.39242 NA intron (NM_005923, intron 21 of 29) intron (NM_005923, intron 21 of 29) -43182 NM_003980 9053 Hs.486548 NM_003980 HPRD:04982 MAP7 E-MAP-115|EMAP115 microtubule-associated protein 7 protein-coding Atac153_MAPQ30_peak_6561 chr8 144450017 144450017 + 5.39242 NA non-coding (NR_026785, exon 1 of 1) non-coding (NR_026785, exon 1 of 1) 788 NR_026785 78998 Hs.245886 NM_024035 HPRD:08328 RHPN1-AS1 C8orf51 RHPN1 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_1336 chr11 116468003 116468003 + 5.39242 NA Intergenic L2b|LINE|L2 175711 NM_032725 84811 Hs.437341 NM_032725 HPRD:11307 BUD13 Cwc26|fSAP71 BUD13 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_2712 chr17 12676170 12676170 + 5.39242 NA intron (NR_104607, intron 1 of 1) L2b|LINE|L2 -16659 NM_014859 9912 Hs.499758 NM_014859 HPRD:13810 ARHGAP44 NPC-A-10|RICH2 Rho GTPase activating protein 44 protein-coding Atac153_MAPQ30_peak_7292 chrX 153759355 153759355 + 5.39242 NA TTS (NM_000402) TTS (NM_000402) -11104 NM_001099856 8517 Hs.43505 NM_003639 HPRD:02217 IKBKG AMCBX1|FIP-3|FIP3|Fip3p|IKK-gamma|IP|IP1|IP2|IPD2|NEMO|ZC2HC9 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma protein-coding Atac153_MAPQ30_peak_2607 chr16 85103048 85103048 + 5.39242 NA intron (NM_001297766, intron 2 of 7) intron (NM_001297766, intron 2 of 7) 6230 NM_001286565 9764 Hs.301658 NM_014732 HPRD:17192 KIAA0513 - KIAA0513 protein-coding Atac153_MAPQ30_peak_1858 chr13 102606412 102606412 + 5.39242 NA intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) 13684 NR_039603 100616110 NR_039603 MIR2681 - microRNA 2681 ncRNA Atac153_MAPQ30_peak_6987 chrX 38799564 38799564 + 5.39242 NA Intergenic MLT1F2|LTR|ERVL-MaLR -136428 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5497 chr5 171785233 171785233 + 5.39242 NA intron (NM_001017995, intron 8 of 12) intron (NM_001017995, intron 8 of 12) -74438 NM_152277 92181 Hs.131570 NM_152277 HPRD:13118 UBTD2 DCUBP ubiquitin domain containing 2 protein-coding Atac153_MAPQ30_peak_2672 chr17 4619710 4619710 + 5.39242 NA exon (NM_199004, exon 4 of 14) exon (NM_199004, exon 4 of 14) 5921 NM_001257328 409 Hs.435811 NM_004313 HPRD:00147 ARRB2 ARB2|ARR2|BARR2 arrestin, beta 2 protein-coding Atac153_MAPQ30_peak_4591 chr3 14905432 14905432 + 5.39242 NA intron (NM_152536, intron 1 of 19) L2b|LINE|L2 44963 NM_152536 152273 Hs.412406 NM_152536 HPRD:13322 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding Atac153_MAPQ30_peak_4543 chr3 8680071 8680071 + 5.39242 NA intron (NM_001256749, intron 1 of 11) intron (NM_001256749, intron 1 of 11) 6413 NR_046358 51066 Hs.736935 NM_015931 HPRD:11267 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog (C. elegans) protein-coding Atac153_MAPQ30_peak_4654 chr3 43123337 43123337 + 5.39242 NA intron (NM_032806, intron 1 of 1) MLT1H2|LTR|ERVL-MaLR 24238 NM_032806 84892 Hs.745002 NM_032806 HPRD:07863 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding Atac153_MAPQ30_peak_3244 chr19 17298482 17298482 + 5.39242 NA intron (NM_001130065, intron 18 of 39) AluJr|SINE|Alu -27673 NM_018467 55850 Hs.16187 NM_018467 HPRD:11299 USE1 P31|SLT1 unconventional SNARE in the ER 1 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_1239 chr11 69140341 69140341 + 5.39242 NA Intergenic Intergenic 78736 NM_001300924 26579 Hs.523848 NM_138768 HPRD:16130 MYEOV OCIM myeloma overexpressed protein-coding Atac153_MAPQ30_peak_2957 chr17 78119827 78119827 + 5.39242 NA intron (NM_014740, intron 1 of 11) L2b|LINE|L2 1155 NM_014740 9775 Hs.389649 NM_014740 HPRD:06482 EIF4A3 DDX48|MUK34|NMP265|NUK34|RCPS|eIF4AIII eukaryotic translation initiation factor 4A3 protein-coding Atac153_MAPQ30_peak_6749 chr9 112277635 112277635 + 5.39242 NA Intergenic Intergenic -17042 NM_001145368 5774 Hs.436429 NM_002829 HPRD:06767 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase, non-receptor type 3 protein-coding Atac153_MAPQ30_peak_2442 chr16 23925688 23925688 + 5.39242 NA intron (NM_212535, intron 2 of 16) intron (NM_212535, intron 2 of 16) 78388 NM_212535 5579 Hs.460355 NM_002738 HPRD:01499 PRKCB PKC-beta|PKCB|PRKCB1|PRKCB2 protein kinase C, beta protein-coding Atac153_MAPQ30_peak_2138 chr15 41062379 41062379 + 5.39242 NA 5' UTR (NM_001130448, exon 1 of 1) 5' UTR (NM_001130448, exon 1 of 1) 220 NM_001130448 643338 Hs.631715 NM_001130448 ENSG00000188277 C15orf62 - chromosome 15 open reading frame 62 protein-coding Atac153_MAPQ30_peak_6170 chr7 139112722 139112722 + 5.39242 NA promoter-TSS (NR_033999) promoter-TSS (NR_033999) -450 NR_033999 100129148 Hs.744449 NR_033999 LOC100129148 - uncharacterized LOC100129148 ncRNA Atac153_MAPQ30_peak_6695 chr9 94583936 94583936 + 5.39242 NA intron (NM_004560, intron 1 of 8) intron (NM_004560, intron 1 of 8) 128508 NM_004560 4920 Hs.98255 NM_004560 HPRD:03822 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase-like orphan receptor 2 protein-coding Atac153_MAPQ30_peak_6304 chr8 20985502 20985502 + 5.39242 NA Intergenic MER6|DNA|TcMar-Tigger 154005 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LOC286114 - uncharacterized LOC286114 ncRNA Atac153_MAPQ30_peak_1923 chr14 54748814 54748814 + 5.39242 NA Intergenic MER52A|LTR|ERV1 -114859 NM_001130851 1033 Hs.84113 NM_005192 HPRD:00450 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin-dependent kinase inhibitor 3 protein-coding Atac153_MAPQ30_peak_5573 chr6 5853644 5853644 + 5.39242 NA Intergenic Intergenic 150633 NM_001278711 51299 Hs.103291 NM_016588 HPRD:07592 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding Atac153_MAPQ30_peak_2284 chr15 81228902 81228902 + 5.39242 NA intron (NM_018689, intron 22 of 28) intron (NM_018689, intron 22 of 28) 53303 NM_015154 23184 Hs.578450 NM_015154 HPRD:12129 MESDC2 BOCA|MESD mesoderm development candidate 2 protein-coding Atac153_MAPQ30_peak_2045 chr14 96267650 96267650 + 5.39242 NA Intergenic Intergenic -75459 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA Atac153_MAPQ30_peak_4942 chr3 189667502 189667502 + 5.39242 NA Intergenic MIR3|SINE|MIR 119791 NR_030642 100126340 NR_030642 MIR944 MIRN944|hsa-mir-944 microRNA 944 ncRNA Atac153_MAPQ30_peak_5585 chr6 7806329 7806329 + 5.39242 NA intron (NM_001718, intron 1 of 6) intron (NM_001718, intron 1 of 6) 79318 NM_001718 654 Hs.285671 NM_001718 HPRD:00211 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding Atac153_MAPQ30_peak_2904 chr17 64704292 64704292 + 5.39242 NA intron (NM_002737, intron 8 of 16) intron (NM_002737, intron 8 of 16) -78898 NR_030364 693219 NR_030364 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA Atac153_MAPQ30_peak_5303 chr5 41124852 41124852 + 5.39242 NA Intergenic Intergenic -53408 NM_173489 133558 Hs.97714 NM_173489 HPRD:08808 MROH2B HEATR7B2 maestro heat-like repeat family member 2B protein-coding Atac153_MAPQ30_peak_4818 chr3 126513957 126513957 + 5.39242 NA intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) 90894 NM_032343 84303 Hs.518119 NM_032343 HPRD:13047 CHCHD6 CHCM1|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding Atac153_MAPQ30_peak_5507 chr5 173986601 173986601 + 5.39242 NA Intergenic MIRb|SINE|MIR -164974 NM_002449 4488 Hs.89404 NM_002449 HPRD:00421 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding Atac153_MAPQ30_peak_5609 chr6 20443328 20443328 + 5.39242 NA intron (NM_001243076, intron 1 of 6) intron (NM_001243076, intron 1 of 6) 39418 NM_001243076 1871 Hs.269408 NM_001949 HPRD:02693 E2F3 E2F-3 E2F transcription factor 3 protein-coding Atac153_MAPQ30_peak_3849 chr2 208956361 208956361 + 5.39242 NA Intergenic Intergenic -27492 NR_038437 100507443 Hs.570295 NR_038437 LOC100507443 - uncharacterized LOC100507443 ncRNA Atac153_MAPQ30_peak_2992 chr18 6376733 6376733 + 5.39242 NA intron (NM_173464, intron 1 of 19) AluJb|SINE|Alu -2309 NR_036205 100422840 NR_036205 MIR4317 - microRNA 4317 ncRNA Atac153_MAPQ30_peak_2637 chr16 88637562 88637562 + 5.39242 NA intron (NM_144604, intron 1 of 17) intron (NM_144604, intron 1 of 17) 773 NM_001294340 124245 Hs.93670 NM_144604 HPRD:11232 ZC3H18 NHN1 zinc finger CCCH-type containing 18 protein-coding Atac153_MAPQ30_peak_4664 chr3 47042889 47042889 + 5.39242 NA exon (NM_015175, exon 29 of 54) exon (NM_015175, exon 29 of 54) -10143 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo Atac153_MAPQ30_peak_228 chr1 43448568 43448568 + 5.39242 NA intron (NR_033967, intron 3 of 3) intron (NR_033967, intron 3 of 3) -23721 NM_006516 6513 Hs.473721 NM_006516 HPRD:00683 SLC2A1 DYT17|DYT18|DYT9|EIG12|GLUT|GLUT1|GLUT1DS|HTLVR|PED solute carrier family 2 (facilitated glucose transporter), member 1 protein-coding Atac153_MAPQ30_peak_1525 chr12 53590787 53590787 + 5.39242 NA intron (NR_104181, intron 4 of 11) intron (NR_104181, intron 4 of 11) 10304 NR_104181 3695 Hs.654470 NM_000889 HPRD:00948 ITGB7 - integrin, beta 7 protein-coding Atac153_MAPQ30_peak_6960 chrX 28060530 28060530 + 5.39242 NA Intergenic Intergenic -60964 NM_001017930 139425 Hs.447365 NM_001017930 HPRD:18551 DCAF8L1 WDR42B DDB1 and CUL4 associated factor 8-like 1 protein-coding Atac153_MAPQ30_peak_2422 chr16 17927975 17927975 + 5.39242 NA Intergenic Intergenic -363237 NM_022166 64131 Hs.22907 NM_022166 HPRD:12168 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI xylosyltransferase I protein-coding Atac153_MAPQ30_peak_5802 chr6 143654357 143654357 + 5.39242 NA intron (NM_001286587, intron 5 of 6) intron (NM_001286587, intron 5 of 6) 109457 NM_001286259 134637 Hs.709561 NM_182503 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase, tRNA-specific 2 protein-coding Atac153_MAPQ30_peak_3888 chr2 225317724 225317724 + 5.39242 NA Intergenic Intergenic -51013 NM_001122779 79843 Hs.147585 NM_024785 HPRD:08663 FAM124B - family with sequence similarity 124B protein-coding Atac153_MAPQ30_peak_4215 chr20 62031745 62031745 + 5.39242 NA Intergenic CpG -38997 NM_001256573 1137 Hs.10734 NM_000744 HPRD:00333 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) protein-coding Atac153_MAPQ30_peak_4905 chr3 170150473 170150473 + 5.39242 NA exon (NM_005602, exon 3 of 3) exon (NM_005602, exon 3 of 3) 9582 NR_106886 102465497 NR_106886 MIR6828 hsa-mir-6828 microRNA 6828 ncRNA Atac153_MAPQ30_peak_4633 chr3 38163254 38163254 + 5.39242 NA TTS (NM_001607) TTS (NM_001607) 15479 NR_024024 30 Hs.643487 NM_001607 HPRD:06815 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding Atac153_MAPQ30_peak_4310 chr21 45164563 45164563 + 5.39242 NA intron (NM_003681, intron 4 of 10) L1MB4|LINE|L1 25585 NM_003681 8566 Hs.284491 NM_003681 HPRD:01526 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK pyridoxal (pyridoxine, vitamin B6) kinase protein-coding Atac153_MAPQ30_peak_965 chr10 126705065 126705065 + 5.39242 NA intron (NM_001329, intron 3 of 10) intron (NM_001329, intron 3 of 10) 11388 NM_022802 1488 Hs.501345 NM_001329 HPRD:04016 CTBP2 - C-terminal binding protein 2 protein-coding Atac153_MAPQ30_peak_6951 chrX 22113705 22113705 + 5.39242 NA intron (NM_001282754, intron 7 of 20) intron (NM_001282754, intron 7 of 20) 63143 NM_001282754 5251 Hs.495834 NM_000444 HPRD:02387 PHEX HPDR|HPDR1|HYP|HYP1|LXHR|PEX|XLH phosphate regulating endopeptidase homolog, X-linked protein-coding Atac153_MAPQ30_peak_6913 chrX 13977659 13977659 + 5.39242 NA Intergenic MER5A|DNA|hAT-Charlie -20828 NM_001001994 2824 Hs.495710 NM_005278 HPRD:02082 GPM6B M6B glycoprotein M6B protein-coding Atac153_MAPQ30_peak_4519 chr22 49584885 49584885 + 5.39242 NA Intergenic Intergenic 322303 NR_038944 100128946 Hs.535676 NR_038944 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA Atac153_MAPQ30_peak_3174 chr19 462612 462612 + 5.39242 NA TTS (NM_182577) TTS (NM_182577) -1616 NM_012435 25759 Hs.30965 NM_012435 ENSG00000129946 SHC2 SCK|SHCB|SLI SHC (Src homology 2 domain containing) transforming protein 2 protein-coding Atac153_MAPQ30_peak_1208 chr11 62768169 62768169 + 5.39242 NA intron (NM_004254, intron 3 of 10) intron (NM_004254, intron 3 of 10) 15148 NM_001184733 9376 Hs.266223 NM_004254 ENSG00000149452 SLC22A8 OAT3 solute carrier family 22 (organic anion transporter), member 8 protein-coding Atac153_MAPQ30_peak_3646 chr2 102726658 102726658 + 5.39242 NA intron (NM_001288706, intron 1 of 11) intron (NM_001288706, intron 1 of 11) -32578 NM_000877 3554 Hs.701982 NM_000877 HPRD:00994 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor, type I protein-coding Atac153_MAPQ30_peak_5383 chr5 121854991 121854991 + 5.39242 NA Intergenic MLT1G3|LTR|ERVL-MaLR -40209 NR_051996 153163 Hs.679757 NR_051996 ENSG00000250328 MGC32805 - uncharacterized LOC153163 ncRNA Atac153_MAPQ30_peak_4390 chr22 30086061 30086061 + 5.39242 NA intron (NM_181832, intron 16 of 16) intron (NM_181832, intron 16 of 16) -30283 NM_182527 164633 Hs.643608 NM_182527 HPRD:12995 CABP7 CALN2 calcium binding protein 7 protein-coding Atac153_MAPQ30_peak_5389 chr5 127120100 127120100 + 5.39242 NA Intergenic Intergenic 131393 NM_001127385 613212 Hs.66194 NM_001048252 ENSG00000205279 CTXN3 KABE cortexin 3 protein-coding Atac153_MAPQ30_peak_6239 chr8 786002 786002 + 5.39242 NA intron (NR_073397, intron 2 of 3) intron (NR_073397, intron 2 of 3) 98397 NR_073397 619343 Hs.667939 NR_073397 ERICH1-AS1 C8orf68 ERICH1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5338 chr5 75573115 75573115 + 5.39242 NA intron (NM_001297716, intron 4 of 12) L1ME1|LINE|L1 -125965 NM_006633 10788 Hs.291030 NM_006633 HPRD:09253 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding Atac153_MAPQ30_peak_7197 chrX 124037912 124037912 + 5.39242 NA intron (NM_001163278, intron 1 of 31) (TG)n|Simple_repeat|Simple_repeat 59754 NM_001163279 10178 Hs.23796 NM_014253 HPRD:06669 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1 teneurin transmembrane protein 1 protein-coding Atac153_MAPQ30_peak_7278 chrX 150439628 150439628 + 5.39242 NA Intergenic FordPrefect|DNA|hAT-Tip100 94572 NM_004224 9248 Hs.567390 NM_004224 HPRD:02194 GPR50 H9|Mel1c G protein-coupled receptor 50 protein-coding Atac153_MAPQ30_peak_600 chr1 235148547 235148547 + 5.39242 NA Intergenic Intergenic 142705 NR_002956 677802 Hs.744743 NR_002956 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA Atac153_MAPQ30_peak_2958 chr17 78185790 78185790 + 5.39242 NA intron (NM_000199, intron 7 of 7) MIRb|SINE|MIR 8409 NM_000199 6448 Hs.31074 NM_000199 HPRD:05590 SGSH HSS|MPS3A|SFMD N-sulfoglucosamine sulfohydrolase protein-coding Atac153_MAPQ30_peak_2307 chr15 90580651 90580651 + 5.39242 NA intron (NM_198526, intron 1 of 4) intron (NM_198526, intron 1 of 4) 35928 NM_198526 374655 Hs.459311 NM_198526 HPRD:13329 ZNF710 - zinc finger protein 710 protein-coding Atac153_MAPQ30_peak_3677 chr2 114016477 114016477 + 5.39242 NA intron (NR_015377, intron 3 of 5) intron (NR_015377, intron 3 of 5) 20021 NM_013952 7849 Hs.469728 NM_003466 HPRD:01335 PAX8 - paired box 8 protein-coding Atac153_MAPQ30_peak_2383 chr16 9058300 9058300 + 5.39242 NA promoter-TSS (NM_003470) promoter-TSS (NM_003470) -959 NM_003470 7874 Hs.386939 NM_003470 HPRD:03950 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 (herpes virus-associated) protein-coding Atac153_MAPQ30_peak_6144 chr7 132063005 132063005 + 5.39242 NA intron (NM_020911, intron 3 of 31) intron (NM_020911, intron 3 of 31) 198318 NM_020911 91584 Hs.511454 NM_020911 HPRD:10901 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding Atac153_MAPQ30_peak_2175 chr15 59283973 59283973 + 5.39242 NA intron (NM_001270530, intron 1 of 13) intron (NM_001270530, intron 1 of 13) 3628 NM_001270530 54778 Hs.404423 NM_017610 HPRD:09318 RNF111 ARK ring finger protein 111 protein-coding Atac153_MAPQ30_peak_74 chr1 12628160 12628160 + 5.39242 NA 3' UTR (NM_004753, exon 6 of 6) 3' UTR (NM_004753, exon 6 of 6) 10891 NR_106788 102466722 NR_106788 MIR6730 hsa-mir-6730 microRNA 6730 ncRNA Atac153_MAPQ30_peak_6519 chr8 139357755 139357755 + 5.39242 NA intron (NM_015912, intron 2 of 19) intron (NM_015912, intron 2 of 19) 151310 NM_015912 51059 Hs.126024 NM_015912 HPRD:14230 FAM135B C8ORFK32 family with sequence similarity 135, member B protein-coding Atac153_MAPQ30_peak_5448 chr5 150425143 150425143 + 5.39242 NA intron (NM_001258454, intron 9 of 17) intron (NM_001258454, intron 9 of 17) 19549 NM_001258456 10318 Hs.355141 NM_006058 HPRD:09216 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding Atac153_MAPQ30_peak_2706 chr17 10672097 10672097 + 5.39242 NA TTS (NR_073457) TTS (NR_073457) 35319 NR_036581 100289255 Hs.306721 NR_036581 ENSG00000263429 LINC00675 - long intergenic non-protein coding RNA 675 ncRNA Atac153_MAPQ30_peak_6893 chrX 4175935 4175935 + 5.39242 NA Intergenic MER52A|LTR|ERV1 375678 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA Atac153_MAPQ30_peak_3193 chr19 3696367 3696367 + 5.39242 NA intron (NM_001300849, intron 1 of 16) L2a|LINE|L2 4110 NM_012398 23396 Hs.282177 NM_012398 HPRD:05834 PIP5K1C LCCS3|PIP5K-GAMMA|PIP5K1-gamma|PIP5Kgamma phosphatidylinositol-4-phosphate 5-kinase, type I, gamma protein-coding Atac153_MAPQ30_peak_5817 chr6 154080667 154080667 + 5.39242 NA Intergenic L1PBa|LINE|L1 -250964 NM_001145280 4988 Hs.2353 NM_000914 HPRD:02484 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor, mu 1 protein-coding Atac153_MAPQ30_peak_7133 chrX 98529252 98529252 + 5.39242 NA Intergenic L1MA2|LINE|L1 665589 NR_024608 442459 Hs.706599 NM_001127438 XRCC6P5 - X-ray repair complementing defective repair in Chinese hamster cells 6 pseudogene 5 pseudo Atac153_MAPQ30_peak_6787 chr9 123236888 123236888 + 5.39242 NA intron (NM_001011649, intron 15 of 36) intron (NM_001011649, intron 15 of 36) 105560 NR_073556 55755 Hs.269560 NM_018249 HPRD:09740 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding Atac153_MAPQ30_peak_5655 chr6 36353655 36353655 + 5.39242 NA intron (NM_001207038, intron 1 of 6) intron (NM_001207038, intron 1 of 6) 1913 NM_001207038 51513 Hs.272398 NM_016135 HPRD:16095 ETV7 TEL-2|TEL2|TELB ets variant 7 protein-coding Atac153_MAPQ30_peak_38 chr1 5908931 5908931 + 5.39242 NA Intergenic Intergenic 13870 NR_039838 100616421 NR_039838 miRBase:MI0017322 MIR4689 - microRNA 4689 ncRNA Atac153_MAPQ30_peak_481 chr1 202203530 202203530 + 5.39242 NA intron (NM_001017403, intron 3 of 17) intron (NM_001017403, intron 3 of 17) 20247 NM_001017404 59352 Hs.497402 NM_021636 HPRD:05974 LGR6 GPCR|VTS20631 leucine-rich repeat containing G protein-coupled receptor 6 protein-coding Atac153_MAPQ30_peak_3733 chr2 131131486 131131486 + 5.39242 NA 3' UTR (NM_001142370, exon 11 of 11) 3' UTR (NM_001142370, exon 11 of 11) 17906 NM_001142370 26469 Hs.516390 NM_014369 HPRD:05961 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase, non-receptor type 18 (brain-derived) protein-coding Atac153_MAPQ30_peak_2662 chr17 3269004 3269004 + 5.39242 NA Intergenic MLT1J1|LTR|ERVL-MaLR 32700 NM_003553 8387 Hs.278485 NM_003553 OR1E1 HGM071|OR13-66|OR17-2|OR17-32|OR1E5|OR1E6|OR1E8P|OR1E9P|OST547 olfactory receptor, family 1, subfamily E, member 1 protein-coding Atac153_MAPQ30_peak_3367 chr2 186466 186466 + 5.39242 NA Intergenic LTR35|LTR|ERV1 69874 NM_001282687 26751 Hs.515951 NM_015677 HPRD:15336 SH3YL1 RAY SH3 and SYLF domain containing 1 protein-coding Atac153_MAPQ30_peak_4644 chr3 40529328 40529328 + 5.39242 NA exon (NM_001145083, exon 4 of 4) exon (NM_001145083, exon 4 of 4) 10695 NM_001145083 285267 Hs.407159 NM_173656 HPRD:15877 ZNF619 - zinc finger protein 619 protein-coding Atac153_MAPQ30_peak_464 chr1 189683187 189683187 + 5.39242 NA Intergenic L1PA15|LINE|L1 763572 NM_199051 339479 Hs.65765 NM_199051 HPRD:16782 BRINP3 DBCCR1L|DBCCR1L1|FAM5C bone morphogenetic protein/retinoic acid inducible neural-specific 3 protein-coding Atac153_MAPQ30_peak_5838 chr6 164154299 164154299 + 5.39242 NA Intergenic MIR|SINE|MIR 318624 NM_001301085 9444 Hs.510324 NM_006775 HPRD:06691 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing, RNA binding protein-coding Atac153_MAPQ30_peak_3504 chr2 38324402 38324402 + 5.39242 NA Intergenic AT_rich|Low_complexity|Low_complexity -21079 NM_000104 1545 Hs.154654 NM_000104 HPRD:03464 CYP1B1 CP1B|CYPIB1|GLC3A|P4501B1 cytochrome P450, family 1, subfamily B, polypeptide 1 protein-coding Atac153_MAPQ30_peak_3238 chr19 15656754 15656754 + 5.39242 NA intron (NM_173483, intron 10 of 13) MER113|DNA|hAT-Charlie 37418 NM_173483 126410 Hs.156452 NM_173483 HPRD:08256 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450, family 4, subfamily F, polypeptide 22 protein-coding Atac153_MAPQ30_peak_5321 chr5 66265581 66265581 + 5.39242 NA intron (NM_001290226, intron 1 of 26) intron (NM_001290226, intron 1 of 26) 10883 NM_001290226 375449 Hs.595458 NM_015183 HPRD:14195 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding Atac153_MAPQ30_peak_2360 chr16 2816610 2816610 + 5.39242 NA exon (NM_016333, exon 11 of 15) exon (NM_016333, exon 11 of 15) 10687 NM_007108 6923 Hs.172772 NM_007108 HPRD:02874 TCEB2 ELOB|SIII transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) protein-coding Atac153_MAPQ30_peak_2237 chr15 74083184 74083184 + 5.39242 NA Intergenic Intergenic 22629 NR_120352 101929221 NR_120352 LOC101929221 - uncharacterized LOC101929221 ncRNA Atac153_MAPQ30_peak_2721 chr17 15295037 15295037 + 5.39242 NA Intergenic MSTB|LTR|ERVL-MaLR -50079 NM_031898 64518 Hs.414648 NM_031898 HPRD:18173 TEKT3 - tektin 3 protein-coding Atac153_MAPQ30_peak_4521 chr22 49731002 49731002 + 5.39242 NA Intergenic Intergenic 320188 NR_110522 348645 Hs.133159 NM_198851 HPRD:14180 C22orf34 - chromosome 22 open reading frame 34 protein-coding Atac153_MAPQ30_peak_6179 chr7 142962385 142962385 + 5.39242 NA exon (NM_001143679, exon 4 of 7) exon (NM_001143679, exon 4 of 7) 1863 NM_001143680 373156 Hs.390667 NM_015917 ENSG00000197448 GSTK1 GST|GST 13-13|GST13|GST13-13|GSTK1-1|hGSTK1 glutathione S-transferase kappa 1 protein-coding Atac153_MAPQ30_peak_796 chr10 73350758 73350758 + 5.39242 NA intron (NM_001171930, intron 9 of 30) intron (NM_001171930, intron 9 of 30) -79081 NR_120672 102723377 Hs.568789 NR_120672 LOC102723377 - uncharacterized LOC102723377 ncRNA Atac153_MAPQ30_peak_5878 chr7 154300 154300 + 5.39242 NA non-coding (NR_108065, exon 2 of 2) non-coding (NR_108065, exon 2 of 2) 4582 NR_108064 100507642 Hs.557780 NR_108064 LOC100507642 - uncharacterized LOC100507642 ncRNA Atac153_MAPQ30_peak_192 chr1 35305972 35305972 + 5.39242 NA Intergenic MIR3|SINE|MIR 18674 NM_001164824 113444 Hs.27160 NM_138428 SMIM12 C1orf212 small integral membrane protein 12 protein-coding Atac153_MAPQ30_peak_2851 chr17 46987581 46987581 + 5.39242 NA intron (NM_023079, intron 1 of 6) intron (NM_023079, intron 1 of 6) 1850 NM_023079 65264 Hs.514297 NM_023079 HPRD:08589 UBE2Z USE1 ubiquitin-conjugating enzyme E2Z protein-coding Atac153_MAPQ30_peak_5990 chr7 47327675 47327675 + 5.39242 NA intron (NM_022748, intron 27 of 30) intron (NM_022748, intron 27 of 30) 294067 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding Atac153_MAPQ30_peak_2959 chr17 78286794 78286794 + 5.39242 NA intron (NM_020954, intron 14 of 16) intron (NM_020954, intron 14 of 16) 52134 NM_020954 57674 Hs.195642 NM_020914 HPRD:10716 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding Atac153_MAPQ30_peak_5935 chr7 26141816 26141816 + 5.39242 NA Intergenic Intergenic -50031 NM_004289 9603 Hs.404741 NM_004289 HPRD:09162 NFE2L3 NRF3 nuclear factor, erythroid 2-like 3 protein-coding Atac153_MAPQ30_peak_5855 chr6 168106003 168106003 + 5.39242 NA Intergenic Intergenic -21536 NR_117092 441178 Hs.628956 NM_001025489 LOC441178 - uncharacterized LOC441178 ncRNA Atac153_MAPQ30_peak_6114 chr7 119883615 119883615 + 5.39242 NA Intergenic Intergenic -30107 NM_012281 3751 Hs.654739 NM_012281 HPRD:09254 KCND2 KV4.2|RK5 potassium voltage-gated channel, Shal-related subfamily, member 2 protein-coding Atac153_MAPQ30_peak_1223 chr11 64856188 64856188 + 5.39242 NA TTS (NM_006782) TTS (NM_006782) 393 NM_001242631 100130348 Hs.98170 NM_001242631 ENSG00000187066 TMEM262 - transmembrane protein 262 protein-coding Atac153_MAPQ30_peak_6551 chr8 143379514 143379514 + 5.39242 NA intron (NM_001291931, intron 8 of 10) intron (NM_001291931, intron 8 of 10) 99797 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA Atac153_MAPQ30_peak_3785 chr2 168700305 168700305 + 5.39242 NA intron (NM_020981, intron 1 of 1) intron (NM_020981, intron 1 of 1) 25123 NM_020981 8708 Hs.735833 NM_020981 HPRD:04369 B3GALT1 beta3Gal-T1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 protein-coding Atac153_MAPQ30_peak_1983 chr14 73799789 73799789 + 5.39242 NA intron (NM_001005745, intron 4 of 10) L1MB5|LINE|L1 95584 NM_173462 89932 Hs.509909 NM_173462 HPRD:15099 PAPLN - papilin, proteoglycan-like sulfated glycoprotein protein-coding Atac153_MAPQ30_peak_4626 chr3 37639280 37639280 + 5.39242 NA intron (NM_002207, intron 15 of 27) MLT1H|LTR|ERVL-MaLR 145467 NM_002207 3680 Hs.113157 NM_002207 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin, alpha 9 protein-coding Atac153_MAPQ30_peak_4449 chr22 40132063 40132063 + 5.39242 NA Intergenic L2a|LINE|L2 157731 NM_152512 150350 Hs.474869 NM_152512 HPRD:08063 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding Atac153_MAPQ30_peak_2917 chr17 70973957 70973957 + 5.39242 NA intron (NM_139177, intron 4 of 9) intron (NM_139177, intron 4 of 9) 114896 NM_139177 201266 Hs.221127 NM_139177 HPRD:15383 SLC39A11 C17orf26|ZIP11 solute carrier family 39, member 11 protein-coding Atac153_MAPQ30_peak_6632 chr9 71425252 71425252 + 5.39242 NA intron (NM_003558, intron 2 of 15) intron (NM_003558, intron 2 of 15) 30288 NM_138333 116224 Hs.655572 NM_138333 HPRD:10074 FAM122A C9orf42 family with sequence similarity 122A protein-coding Atac153_MAPQ30_peak_7142 chrX 103692691 103692691 + 5.39242 NA Intergenic Intergenic -118305 NM_017416 26280 Hs.675519 NM_017416 HPRD:02231 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein-like 2 protein-coding Atac153_MAPQ30_peak_3703 chr2 122757631 122757631 + 5.39242 NA Intergenic Intergenic 244510 NR_048557 7247 Hs.75066 NM_004622 HPRD:08993 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding Atac153_MAPQ30_peak_5314 chr5 61382491 61382491 + 5.39242 NA Intergenic Intergenic -219498 NM_001243953 3796 Hs.558351 NM_004520 KIF2A CDCBM3|HK2|KIF2 kinesin heavy chain member 2A protein-coding Atac153_MAPQ30_peak_5374 chr5 112526689 112526689 + 5.39242 NA intron (NM_001085377, intron 3 of 18) intron (NM_001085377, intron 3 of 18) 103923 NM_002387 4163 Hs.593171 NM_002387 HPRD:01157 MCC MCC1 mutated in colorectal cancers protein-coding Atac153_MAPQ30_peak_1891 chr14 21793938 21793938 + 5.39242 NA intron (NM_020366, intron 15 of 23) intron (NM_020366, intron 15 of 23) 37802 NM_020366 57096 Hs.126035 NM_020366 HPRD:05673 RPGRIP1 CORD13|LCA6|RGI1|RGRIP|RPGRIP|RPGRIP1d retinitis pigmentosa GTPase regulator interacting protein 1 protein-coding Atac153_MAPQ30_peak_322 chr1 111287489 111287489 + 5.39242 NA Intergenic Intergenic -69834 NM_002232 3738 Hs.169948 NM_002232 HPRD:15937 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel, shaker-related subfamily, member 3 protein-coding Atac153_MAPQ30_peak_2204 chr15 67040698 67040698 + 5.39242 NA intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 39768 NM_001142861 4091 Hs.153863 NM_005585 HPRD:04240 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding Atac153_MAPQ30_peak_3161 chr18 75569894 75569894 + 5.39242 NA Intergenic Intergenic 135789 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA Atac153_MAPQ30_peak_6145 chr7 132078347 132078347 + 5.39242 NA intron (NM_001105543, intron 3 of 3) L2b|LINE|L2 182976 NM_020911 91584 Hs.511454 NM_020911 HPRD:10901 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding Atac153_MAPQ30_peak_3430 chr2 16348914 16348914 + 5.39242 NA Intergenic L2c|LINE|L2 -267069 NR_110230 10408 Hs.651453 NM_006316 ENSG00000233718 MYCNOS MYCN-AS1|N-CYM|NCYM|NYCM MYCN opposite strand ncRNA Atac153_MAPQ30_peak_6316 chr8 23159074 23159074 + 5.39242 NA intron (NM_002318, intron 12 of 13) intron (NM_002318, intron 12 of 13) 13462 NM_001136108 203069 Hs.458644 NM_001136108 ENSG00000104679 R3HCC1 - R3H domain and coiled-coil containing 1 protein-coding Atac153_MAPQ30_peak_5996 chr7 48938486 48938486 + 5.39242 NA Intergenic Intergenic -25671 NR_003595 168448 Hs.567757 NM_152627 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C pseudo Atac153_MAPQ30_peak_6215 chr7 155815482 155815482 + 5.39242 NA Intergenic Intergenic 60156 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding Atac153_MAPQ30_peak_4917 chr3 179017699 179017699 + 5.39242 NA Intergenic MLT1F2|LTR|ERVL-MaLR -23852 NM_016331 51193 Hs.632578 NM_016331 HPRD:15882 ZNF639 6230400O18Rik|ANC-2H01|ANC_2H01|ZASC1 zinc finger protein 639 protein-coding Atac153_MAPQ30_peak_4027 chr20 22271216 22271216 + 5.39242 NA Intergenic Intergenic -7777 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA Atac153_MAPQ30_peak_3730 chr2 130569220 130569220 + 5.39242 NA Intergenic Intergenic -111530 NR_110285 101927924 Hs.570248 NR_110285 ENSG00000237574 LOC101927924 - uncharacterized LOC101927924 ncRNA Atac153_MAPQ30_peak_941 chr10 123329913 123329913 + 5.39242 NA intron (NM_001144913, intron 1 of 16) intron (NM_001144913, intron 1 of 16) 23568 NM_001144913 2263 Hs.533683 NM_000141 HPRD:01492 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding Atac153_MAPQ30_peak_5862 chr6 168747738 168747738 + 5.39242 NA Intergenic Intergenic -27304 NM_214462 168002 Hs.673059 NM_214462 HPRD:12345 DACT2 C6orf116|DAPPER2|DPR2|bA503C24.7 dishevelled-binding antagonist of beta-catenin 2 protein-coding Atac153_MAPQ30_peak_2250 chr15 75487707 75487707 + 5.39242 NA Intergenic Intergenic -6514 NM_015492 56905 Hs.17936 NM_015492 HPRD:13154 C15orf39 - chromosome 15 open reading frame 39 protein-coding Atac153_MAPQ30_peak_3280 chr19 33729533 33729533 + 5.39242 NA Intergenic Intergenic -12777 NM_019849 56301 Hs.58679 NM_019849 HPRD:12137 SLC7A10 HASC-1|asc-1 solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10 protein-coding Atac153_MAPQ30_peak_3287 chr19 35697234 35697234 + 5.39242 NA Intergenic MLT1K|LTR|ERVL-MaLR 22394 NM_152481 148109 Hs.128069 NM_152481 HPRD:08071 FAM187B TMEM162 family with sequence similarity 187, member B protein-coding Atac153_MAPQ30_peak_7279 chrX 150924034 150924034 + 5.39242 NA Intergenic Intergenic 20816 NM_005140 1260 Hs.447360 NM_005140 HPRD:08946 CNGA2 CNCA|CNCA1|CNG2|OCNC1|OCNCALPHA|OCNCa cyclic nucleotide gated channel alpha 2 protein-coding Atac153_MAPQ30_peak_4301 chr21 43700234 43700234 + 5.39242 NA intron (NM_207628, intron 7 of 16) intron (NM_207628, intron 7 of 16) 35472 NM_003226 7033 Hs.82961 NM_003226 HPRD:02797 TFF3 ITF|P1B|TFI trefoil factor 3 (intestinal) protein-coding Atac153_MAPQ30_peak_5534 chr5 178012693 178012693 + 5.39242 NA intron (NM_173465, intron 1 of 28) intron (NM_173465, intron 1 of 28) 4863 NM_173465 91522 Hs.660026 NM_173465 HPRD:16733 COL23A1 - collagen, type XXIII, alpha 1 protein-coding Atac153_MAPQ30_peak_2934 chr17 73912743 73912743 + 5.39242 NA intron (NM_001080542, intron 22 of 28) intron (NM_001080542, intron 22 of 28) -11562 NM_032478 64978 Hs.442609 NM_032478 HPRD:14758 MRPL38 L38MT|MRP-L3|MRP-L38|RPML3 mitochondrial ribosomal protein L38 protein-coding Atac153_MAPQ30_peak_1535 chr12 56226886 56226886 + 5.39242 NA non-coding (NR_036477, exon 3 of 4) non-coding (NR_036477, exon 3 of 4) -3466 NM_032364 85406 Hs.709320 NM_032364 HPRD:12082 DNAJC14 DNAJ|DRIP78|HDJ3|LIP6 DnaJ (Hsp40) homolog, subfamily C, member 14 protein-coding Atac153_MAPQ30_peak_3956 chr2 241169603 241169603 + 5.39242 NA Intergenic Intergenic -89530 NM_148961 150677 Hs.148586 NM_148961 HPRD:09714 OTOS OTOSP otospiralin protein-coding Atac153_MAPQ30_peak_6917 chrX 16220195 16220195 + 5.39242 NA Intergenic MLT1M|LTR|ERVL-MaLR 34591 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 - melanoma antigen family B, 17 protein-coding Atac153_MAPQ30_peak_5986 chr7 45621789 45621789 + 5.39242 NA intron (NM_001281768, intron 2 of 9) intron (NM_001281768, intron 2 of 9) 7664 NM_021116 107 Hs.192215 NM_021116 HPRD:00053 ADCY1 AC1|DFNB44 adenylate cyclase 1 (brain) protein-coding Atac153_MAPQ30_peak_5242 chr5 6525884 6525884 + 5.39242 NA Intergenic Intergenic -56365 NR_024423 255167 Hs.435515 NR_024423 ENSG00000250056 LINC01018 - long intergenic non-protein coding RNA 1018 ncRNA Atac153_MAPQ30_peak_4950 chr3 197250744 197250744 + 5.39242 NA intron (NM_004051, intron 4 of 6) intron (NM_004051, intron 4 of 6) 32114 NM_203314 622 Hs.274539 NM_004051 HPRD:04344 BDH1 BDH|SDR9C1 3-hydroxybutyrate dehydrogenase, type 1 protein-coding Atac153_MAPQ30_peak_73 chr1 12542104 12542104 + 5.39242 NA intron (NM_015378, intron 67 of 69) intron (NM_015378, intron 67 of 69) -25196 NR_003025 677885 Hs.658450 NR_003025 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA Atac153_MAPQ30_peak_2172 chr15 58575191 58575191 + 5.39242 NA Intergenic MLT2B1|LTR|ERVL 144783 NM_020980 366 Hs.104624 NM_020980 HPRD:04223 AQP9 AQP-9|HsT17287|SSC1 aquaporin 9 protein-coding Atac153_MAPQ30_peak_7111 chrX 80573423 80573423 + 5.39242 NA Intergenic L1MA3|LINE|L1 -115982 NM_030763 79366 Hs.282204 NM_030763 HPRD:02310 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding Atac153_MAPQ30_peak_1729 chr12 130359864 130359864 + 5.39242 NA intron (NM_133448, intron 1 of 8) intron (NM_133448, intron 1 of 8) 28348 NM_133448 121256 Hs.507268 NM_133448 HPRD:13906 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding Atac153_MAPQ30_peak_2605 chr16 84747131 84747131 + 5.39242 NA intron (NM_001272075, intron 2 of 14) L2a|LINE|L2 13576 NR_073578 9100 Hs.136778 NM_005153 HPRD:07029 USP10 UBPO ubiquitin specific peptidase 10 protein-coding Atac153_MAPQ30_peak_7185 chrX 120416361 120416361 + 5.39242 NA Intergenic L1M2|LINE|L1 234899 NM_012084 2747 Hs.368538 NM_012084 HPRD:02143 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding Atac153_MAPQ30_peak_1622 chr12 108859020 108859020 + 5.39242 NA intron (NR_120483, intron 2 of 3) intron (NR_120483, intron 2 of 3) 8446 NR_120483 102723562 Hs.455693 NR_120483 LINC01498 - long intergenic non-protein coding RNA 1498 ncRNA Atac153_MAPQ30_peak_928 chr10 120589952 120589952 + 5.39242 NA Intergenic Intergenic -75194 NM_153810 143384 Hs.420024 NM_153810 HPRD:12576 CACUL1 C10orf46|CAC1 CDK2-associated, cullin domain 1 protein-coding Atac153_MAPQ30_peak_510 chr1 207596379 207596379 + 5.39242 NA Intergenic HERVL18-int|LTR|ERVL -31266 NM_001006658 1380 Hs.445757 NM_001877 HPRD:00399 CR2 C3DR|CD21|CR|CVID7|SLEB9 complement component (3d/Epstein Barr virus) receptor 2 protein-coding Atac153_MAPQ30_peak_2704 chr17 10363655 10363655 + 5.39242 NA intron (NM_017533, intron 12 of 39) intron (NM_017533, intron 12 of 39) 9221 NM_017533 4622 Hs.711141 NM_017533 HPRD:08873 MYH4 MYH2B|MyHC-2B|MyHC-IIb myosin, heavy chain 4, skeletal muscle protein-coding Atac153_MAPQ30_peak_3073 chr18 44008487 44008487 + 5.39242 NA intron (NM_001256758, intron 1 of 5) intron (NM_001256758, intron 1 of 5) 90562 NM_001173129 125336 Hs.345877 NM_144612 HPRD:08316 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding Atac153_MAPQ30_peak_3115 chr18 55259206 55259206 + 5.39242 NA Intergenic Intergenic -5237 NM_000140 2235 Hs.365365 NM_000140 FECH EPP|FCE ferrochelatase protein-coding Atac153_MAPQ30_peak_3128 chr18 60294123 60294123 + 5.39242 NA Intergenic Intergenic -88549 NM_194449 23239 Hs.465337 NM_194449 HPRD:15145 PHLPP1 PHLPP|PLEKHE1|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding Atac153_MAPQ30_peak_1967 chr14 69389505 69389505 + 5.39242 NA intron (NM_001102, intron 2 of 20) MER5A|DNA|hAT-Charlie 56578 NM_001130004 87 Hs.509765 NM_001102 HPRD:00020 ACTN1 BDPLT15 actinin, alpha 1 protein-coding Atac153_MAPQ30_peak_701 chr10 29633060 29633060 + 5.39242 NA Intergenic Intergenic 55070 NM_032517 84569 Hs.558572 NM_032517 HPRD:14336 LYZL1 KAAG648|LYC2|PRO1278|bA534G20.1 lysozyme-like 1 protein-coding Atac153_MAPQ30_peak_5687 chr6 42966922 42966922 + 5.39242 NA intron (NM_006245, intron 2 of 15) intron (NM_006245, intron 2 of 15) 14685 NM_180977 5528 Hs.533308 NM_006245 HPRD:09039 PPP2R5D B56D protein phosphatase 2, regulatory subunit B', delta protein-coding Atac153_MAPQ30_peak_2040 chr14 95396583 95396583 + 5.39242 NA Intergenic MIRc|SINE|MIR -160084 NM_173849 145258 Hs.440438 NM_173849 HPRD:15928 GSC SAMS goosecoid homeobox protein-coding Atac153_MAPQ30_peak_6247 chr8 1845436 1845436 + 5.39242 NA intron (NM_014629, intron 14 of 28) intron (NM_014629, intron 14 of 28) 73287 NM_014629 9639 Hs.98594 NM_014629 HPRD:09735 ARHGEF10 GEF10 Rho guanine nucleotide exchange factor (GEF) 10 protein-coding Atac153_MAPQ30_peak_4930 chr3 184104749 184104749 + 5.39242 NA intron (NM_003741, intron 17 of 22) intron (NM_003741, intron 17 of 22) 6888 NM_003741 8646 Hs.166186 NM_003741 HPRD:04592 CHRD - chordin protein-coding Atac153_MAPQ30_peak_3284 chr19 34177075 34177075 + 5.39242 NA intron (NM_022467, intron 1 of 3) intron (NM_022467, intron 1 of 3) 1641 NM_022467 64377 Hs.165724 NM_022467 HPRD:07632 CHST8 GALNAC4ST1|GalNAc4ST carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 protein-coding Atac153_MAPQ30_peak_1630 chr12 109981764 109981764 + 5.39242 NA Intergenic Intergenic 29594 NM_052845 326625 Hs.12106 NM_052845 HPRD:07398 MMAB ATR|CFAP23|cblB|cob methylmalonic aciduria (cobalamin deficiency) cblB type protein-coding Atac153_MAPQ30_peak_5074 chr4 49657581 49657581 + 5.39242 NA Intergenic (GAATG)n|Satellite|Satellite 668922 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5991 chr7 47410805 47410805 + 5.39242 NA intron (NM_022748, intron 16 of 30) intron (NM_022748, intron 16 of 30) 210937 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding Atac153_MAPQ30_peak_3902 chr2 233141703 233141703 + 5.39242 NA intron (NR_046477, intron 12 of 18) intron (NR_046477, intron 12 of 18) -101645 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding Atac153_MAPQ30_peak_2282 chr15 80782508 80782508 + 5.39242 NA intron (NM_014862, intron 5 of 18) LTR16A1|LTR|ERVL 72777 NR_120363 101929586 Hs.569426 NR_120363 ENSG00000259175 LOC101929586 - uncharacterized LOC101929586 ncRNA Atac153_MAPQ30_peak_7196 chrX 124013373 124013373 + 5.39242 NA intron (NM_001163278, intron 3 of 31) L1MA4A|LINE|L1 84293 NM_001163279 10178 Hs.23796 NM_014253 HPRD:06669 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1 teneurin transmembrane protein 1 protein-coding Atac153_MAPQ30_peak_203 chr1 37754692 37754692 + 5.39242 NA Intergenic MLT1H|LTR|ERVL-MaLR 127528 NR_036217 100422898 NR_036217 miRBase:MI0015863 MIR4255 - microRNA 4255 ncRNA Atac153_MAPQ30_peak_3 chr1 825926 825926 + 5.39242 NA Intergenic Intergenic -13744 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41, member C ncRNA Atac153_MAPQ30_peak_4878 chr3 139779263 139779263 + 5.39242 NA intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 125236 NM_022131 64084 Hs.158529 NM_022131 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding Atac153_MAPQ30_peak_317 chr1 109678833 109678833 + 5.39242 NA intron (NM_001284352, intron 1 of 20) MLT1C|LTR|ERVL-MaLR 22248 NM_001267048 57535 Hs.708190 NM_020775 KIAA1324 EIG121 KIAA1324 protein-coding Atac153_MAPQ30_peak_2309 chr15 91372763 91372763 + 5.39242 NA Intergenic Intergenic -39059 NM_002569 5045 Hs.513153 NM_002569 HPRD:00653 FURIN FUR|PACE|PCSK3|SPC1 furin (paired basic amino acid cleaving enzyme) protein-coding Atac153_MAPQ30_peak_6146 chr7 132134952 132134952 + 5.39242 NA intron (NM_001105543, intron 3 of 3) MIR3|SINE|MIR 126371 NM_020911 91584 Hs.511454 NM_020911 HPRD:10901 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding Atac153_MAPQ30_peak_279 chr1 58903590 58903590 + 5.39242 NA Intergenic Intergenic 108856 NM_145243 115209 Hs.425769 NM_145243 HPRD:14879 OMA1 2010001O09Rik|DAB1|MPRP-1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding Atac153_MAPQ30_peak_4577 chr3 13852935 13852935 + 5.39242 NA Intergenic Intergenic 68683 NM_004625 7476 Hs.72290 NM_004625 WNT7A - wingless-type MMTV integration site family, member 7A protein-coding Atac153_MAPQ30_peak_4733 chr3 62372846 62372846 + 5.39242 NA Intergenic Intergenic -13656 NM_018008 55079 Hs.241523 NM_018008 HPRD:07596 FEZF2 FEZ|FEZL|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding Atac153_MAPQ30_peak_5212 chr5 1175738 1175738 + 5.39242 NA non-coding (NR_109911, exon 3 of 5) non-coding (NR_109911, exon 3 of 5) 2982 NR_109911 101928857 Hs.593732 NR_109911 ENSG00000249201 CTD-3080P12.3 - uncharacterized LOC101928857 ncRNA Atac153_MAPQ30_peak_2391 chr16 10757703 10757703 + 5.39242 NA intron (NM_144674, intron 5 of 6) MER20|DNA|hAT-Charlie 31099 NM_144674 146279 Hs.143519 NM_144674 HPRD:08736 TEKT5 CT149 tektin 5 protein-coding Atac153_MAPQ30_peak_1671 chr12 119303950 119303950 + 5.39242 NA Intergenic MIR|SINE|MIR -115350 NM_194286 84530 Hs.744964 NM_194286 HPRD:13897 SRRM4 KIAA1853|MU-MB-2.76|nSR100 serine/arginine repetitive matrix 4 protein-coding Atac153_MAPQ30_peak_940 chr10 123304563 123304563 + 5.39242 NA intron (NR_073009, intron 3 of 16) AluJb|SINE|Alu 48918 NM_001144913 2263 Hs.533683 NM_000141 HPRD:01492 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding Atac153_MAPQ30_peak_101 chr1 17251792 17251792 + 5.39242 NA intron (NM_014675, intron 3 of 36) MIRb|SINE|MIR 3347 NM_014675 9696 Hs.309403 NM_014675 HPRD:16758 CROCC ROLT ciliary rootlet coiled-coil, rootletin protein-coding Atac153_MAPQ30_peak_5478 chr5 167256439 167256439 + 5.39242 NA intron (NM_001122679, intron 2 of 28) Charlie4z|DNA|hAT-Charlie 402938 NR_109894 101927862 Hs.659376 NR_109894 ENSG00000253978 CTB-178M22.2 - uncharacterized LOC101927862 ncRNA Atac153_MAPQ30_peak_2933 chr17 73868779 73868779 + 5.39242 NA Intergenic Intergenic 5877 NM_033452 91107 Hs.293660 NM_033452 HPRD:15564 TRIM47 GOA|RNF100 tripartite motif containing 47 protein-coding Atac153_MAPQ30_peak_5313 chr5 56974571 56974571 + 5.39242 NA Intergenic Intergenic 28084 NR_104668 101928505 Hs.119998 NR_104668 LOC101928505 - uncharacterized LOC101928505 ncRNA Atac153_MAPQ30_peak_4876 chr3 139668013 139668013 + 5.39242 NA intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 13986 NM_022131 64084 Hs.158529 NM_022131 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding Atac153_MAPQ30_peak_5959 chr7 33771147 33771147 + 5.39242 NA Intergenic MLT1C|LTR|ERVL-MaLR -173376 NM_133468 168667 Hs.660998 NM_133468 HPRD:16368 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding Atac153_MAPQ30_peak_4427 chr22 36653174 36653174 + 5.39242 NA exon (NM_003661, exon 3 of 6) exon (NM_003661, exon 3 of 6) 4057 NM_003661 8542 Hs.114309 NM_003661 HPRD:04774 APOL1 APO-L|APOL|APOL-I|FSGS4 apolipoprotein L, 1 protein-coding Atac153_MAPQ30_peak_283 chr1 64088830 64088830 + 5.39242 NA promoter-TSS (NM_001172818) promoter-TSS (NM_001172818) -57 NM_001172818 5236 Hs.1869 NM_002633 HPRD:01389 PGM1 CDG1T|GSD14 phosphoglucomutase 1 protein-coding Atac153_MAPQ30_peak_6916 chrX 15899681 15899681 + 5.39242 NA Intergenic Intergenic -26544 NM_003916 8905 Hs.121592 NM_003916 HPRD:04636 AP1S2 MGC:1902|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B adaptor-related protein complex 1, sigma 2 subunit protein-coding Atac153_MAPQ30_peak_4187 chr20 57322048 57322048 + 5.39242 NA Intergenic Intergenic 54186 NM_024663 79716 Hs.654868 NM_024663 HPRD:07496 NPEPL1 bA261P9.2 aminopeptidase-like 1 protein-coding Atac153_MAPQ30_peak_4180 chr20 55766095 55766095 + 5.39242 NA intron (NM_001719, intron 3 of 6) MER20|DNA|hAT-Charlie -22657 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3808 chr2 179075885 179075885 + 5.39242 NA intron (NM_001201482, intron 1 of 23) AluJo|SINE|Alu 16677 NM_032523 114880 Hs.318775 NM_032523 HPRD:09476 OSBPL6 ORP6 oxysterol binding protein-like 6 protein-coding Atac153_MAPQ30_peak_6082 chr7 98087378 98087378 + 5.39242 NA Intergenic Intergenic -56951 NM_018842 55971 Hs.656063 NM_018842 HPRD:11270 BAIAP2L1 IRTKS BAI1-associated protein 2-like 1 protein-coding Atac153_MAPQ30_peak_748 chr10 48456025 48456025 + 5.39242 NA Intergenic Intergenic -16887 NM_004962 2662 Hs.2171 NM_004962 HPRD:03218 GDF10 BMP-3b|BMP3B growth differentiation factor 10 protein-coding Atac153_MAPQ30_peak_390 chr1 156540137 156540137 + 5.39242 NA intron (NM_178229, intron 1 of 37) AluJb|SINE|Alu 2259 NM_178229 128239 Hs.591495 NM_178229 HPRD:11051 IQGAP3 - IQ motif containing GTPase activating protein 3 protein-coding Atac153_MAPQ30_peak_2021 chr14 90758923 90758923 + 5.39242 NA intron (NM_017970, intron 9 of 13) intron (NM_017970, intron 9 of 13) 36029 NM_002802 5700 Hs.356654 NM_002802 HPRD:04084 PSMC1 P26S4|S4|p56 proteasome (prosome, macropain) 26S subunit, ATPase, 1 protein-coding Atac153_MAPQ30_peak_311 chr1 108050577 108050577 + 5.39242 NA Intergenic Tigger1|DNA|TcMar-Tigger 180549 NM_001079874 10451 Hs.267659 NM_006113 HPRD:05706 VAV3 - vav 3 guanine nucleotide exchange factor protein-coding Atac153_MAPQ30_peak_1721 chr12 129442843 129442843 + 5.39242 NA intron (NM_144669, intron 7 of 7) MIR|SINE|MIR 104762 NM_144669 144423 Hs.655668 NM_144669 HPRD:08115 GLT1D1 - glycosyltransferase 1 domain containing 1 protein-coding Atac153_MAPQ30_peak_3477 chr2 28817841 28817841 + 5.39242 NA intron (NM_001170585, intron 32 of 56) intron (NM_001170585, intron 32 of 56) 98903 NM_153021 151056 Hs.444933 NM_153021 HPRD:15141 PLB1 PLB|PLB/LIP|hPLB phospholipase B1 protein-coding Atac153_MAPQ30_peak_5230 chr5 3857993 3857993 + 5.39242 NA Intergenic L2a|LINE|L2 261825 NM_024337 79192 Hs.424156 NM_024337 HPRD:16203 IRX1 IRX-5|IRXA1 iroquois homeobox 1 protein-coding Atac153_MAPQ30_peak_1209 chr11 62924533 62924533 + 5.39242 NA Intergenic L1MA4A|LINE|L1 -12840 NM_001136506 283238 Hs.375139 NM_173586 HPRD:14591 SLC22A24 NET46 solute carrier family 22, member 24 protein-coding Atac153_MAPQ30_peak_4710 chr3 53775127 53775127 + 5.39242 NA intron (NM_000720, intron 22 of 48) intron (NM_000720, intron 22 of 48) 105293 NM_018397 55349 Hs.126688 NM_018397 CHDH - choline dehydrogenase protein-coding Atac153_MAPQ30_peak_5901 chr7 3881938 3881938 + 5.39242 NA intron (NM_152744, intron 5 of 44) intron (NM_152744, intron 5 of 44) -287379 NM_001079653 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_4872 chr3 138974361 138974361 + 5.39242 NA Intergenic Intergenic -21997 NR_027070 140464 Hs.721270 NR_027070 PISRT1 NCRNA00195 polled intersex syndrome regulated transcript 1 (non-protein coding RNA) ncRNA Atac153_MAPQ30_peak_2046 chr14 96353000 96353000 + 5.39242 NA intron (NR_038861, intron 1 of 1) intron (NR_038861, intron 1 of 1) 9891 NR_038861 100507043 Hs.455955 NR_038861 ENSG00000250366 TUNAR LINC00617|TUNA TCL1 upstream neural differentiation-associated RNA ncRNA Atac153_MAPQ30_peak_2729 chr17 17577342 17577342 + 5.39242 NA Intergenic MSTD|LTR|ERVL-MaLR -7445 NM_030665 10743 Hs.655395 NM_030665 HPRD:07406 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding Atac153_MAPQ30_peak_3308 chr19 42384423 42384423 + 5.39242 NA intron (NM_021601, intron 3 of 4) AluJr|SINE|Alu -2844 NM_004706 9138 Hs.631550 NM_004706 HPRD:03511 ARHGEF1 GEF1|LBCL2|LSC|P115-RHOGEF|SUB1.5 Rho guanine nucleotide exchange factor (GEF) 1 protein-coding Atac153_MAPQ30_peak_5731 chr6 88003401 88003401 + 5.39242 NA intron (NM_198568, intron 2 of 2) intron (NM_198568, intron 2 of 2) -28905 NM_020425 57150 Hs.70769 NM_020425 HPRD:12862 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding Atac153_MAPQ30_peak_3673 chr2 110430600 110430600 + 5.39242 NA Intergenic Intergenic 58689 NM_023016 65124 Hs.355455 NM_023016 HPRD:08643 SOWAHC ANKRD57|C2orf26 sosondowah ankyrin repeat domain family member C protein-coding Atac153_MAPQ30_peak_4344 chr22 22326191 22326191 + 5.39242 NA intron (NM_001282112, intron 5 of 17) intron (NM_001282112, intron 5 of 17) 11049 NM_001282112 8940 Hs.436401 NM_003935 HPRD:04662 TOP3B TOP3B1 topoisomerase (DNA) III beta protein-coding Atac153_MAPQ30_peak_7168 chrX 114653453 114653453 + 5.39242 NA Intergenic Intergenic 129170 NM_016383 51213 Hs.242183 NM_016383 HPRD:06589 LUZP4 CT-28|CT-8|CT28|HOM-TES-85 leucine zipper protein 4 protein-coding Atac153_MAPQ30_peak_1203 chr11 61100328 61100328 + 5.39242 NA promoter-TSS (NM_015533) promoter-TSS (NM_015533) -326 NM_015533 26007 Hs.6278 NM_015533 HPRD:13180 DAK NET45 dihydroxyacetone kinase 2 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5024 chr4 10162697 10162697 + 5.39242 NA Intergenic Intergenic -44124 NM_017491 9948 Hs.128548 NM_005112 HPRD:09199 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding Atac153_MAPQ30_peak_3114 chr18 54795584 54795584 + 5.39242 NA Intergenic Intergenic -18709 NM_001257964 284257 Hs.127882 NM_001257964 ENSG00000228075 BOD1L2 BOD1P|FAM44C biorientation of chromosomes in cell division 1-like 2 protein-coding Atac153_MAPQ30_peak_1331 chr11 115648726 115648726 + 5.39242 NA Intergenic Intergenic -17808 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA Atac153_MAPQ30_peak_1464 chr12 14713894 14713894 + 5.39242 NA intron (NM_024829, intron 1 of 10) LTR16E2|LTR|ERVL -6772 NR_120465 101928290 Hs.131933 NR_120465 ENSG00000256751 PLBD1-AS1 - PLBD1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4885 chr3 141165978 141165978 + 5.39242 NA 3' UTR (NM_001080412, exon 8 of 8) 3' UTR (NM_001080412, exon 8 of 8) -39948 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding Atac153_MAPQ30_peak_61 chr1 9854132 9854132 + 5.39242 NA intron (NM_001009566, intron 1 of 18) intron (NM_001009566, intron 1 of 18) 30418 NM_001009566 22883 Hs.29665 NM_014944 HPRD:10837 CLSTN1 ALC-ALPHA|CDHR12|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding Atac153_MAPQ30_peak_2041 chr14 95658313 95658313 + 5.39242 NA intron (NM_024734, intron 12 of 12) MIR3|SINE|MIR -33966 NM_030621 23405 Hs.87889 NM_030621 HPRD:05875 DICER1 DCR1|Dicer|HERNA|MNG1|RMSE2 dicer 1, ribonuclease type III protein-coding Atac153_MAPQ30_peak_2524 chr16 57785834 57785834 + 5.39242 NA intron (NM_005886, intron 7 of 19) intron (NM_005886, intron 7 of 19) 16174 NM_005886 10300 Hs.275675 NM_005886 HPRD:04081 KATNB1 KAT katanin p80 (WD repeat containing) subunit B 1 protein-coding Atac153_MAPQ30_peak_2666 chr17 3655197 3655197 + 5.39242 NA intron (NM_002208, intron 14 of 30) intron (NM_002208, intron 14 of 30) 28000 NM_031965 83903 Hs.534059 NM_031965 HPRD:17083 GSG2 HASPIN germ cell associated 2 (haspin) protein-coding Atac153_MAPQ30_peak_5184 chr4 169999041 169999041 + 5.39242 NA Intergenic Intergenic -67573 NM_032783 84869 Hs.659311 NM_032783 HPRD:07859 CBR4 SDR45C1 carbonyl reductase 4 protein-coding Atac153_MAPQ30_peak_7183 chrX 119873883 119873883 + 5.39242 NA Intergenic Intergenic -109878 NM_152692 29071 Hs.643920 NM_152692 HPRD:06462 C1GALT1C1 C1GALT2|C38H2-L1|COSMC|MST143|TNPS C1GALT1-specific chaperone 1 protein-coding Atac153_MAPQ30_peak_3991 chr20 5451687 5451687 + 5.39242 NA promoter-TSS (NR_029405) promoter-TSS (NR_029405) -155 NR_029405 643406 Hs.431161 NM_175877 LOC643406 - uncharacterized LOC643406 ncRNA Atac153_MAPQ30_peak_3148 chr18 73338304 73338304 + 5.39242 NA Intergenic Intergenic -198715 NM_001037331 284274 Hs.666744 NM_001037331 SMIM21 C18orf62 small integral membrane protein 21 protein-coding Atac153_MAPQ30_peak_3067 chr18 42821288 42821288 + 5.39242 NA intron (NM_001242692, intron 1 of 20) L2b|LINE|L2 28341 NM_001242692 8170 Hs.710927 NM_007163 HPRD:03366 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 (urea transporter), member 2 protein-coding Atac153_MAPQ30_peak_2025 chr14 91261203 91261203 + 5.39242 NA intron (NM_001010854, intron 1 of 19) intron (NM_001010854, intron 1 of 19) 21558 NM_001010854 145567 Hs.655697 NM_001010854 HPRD:18503 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding Atac153_MAPQ30_peak_1122 chr11 20378915 20378915 + 5.39242 NA Intergenic Intergenic -6316 NM_006410 10553 Hs.90753 NM_006410 HPRD:09288 HTATIP2 CC3|SDR44U1|TIP30 HIV-1 Tat interactive protein 2, 30kDa protein-coding Atac153_MAPQ30_peak_4694 chr3 51737168 51737168 + 5.39242 NA intron (NM_001243725, intron 4 of 4) intron (NM_001243725, intron 4 of 4) -3913 NM_001130063 2912 Hs.121510 NM_000839 HPRD:04977 GRM2 GLUR2|GPRC1B|MGLUR2|mGlu2 glutamate receptor, metabotropic 2 protein-coding Atac153_MAPQ30_peak_6116 chr7 122332700 122332700 + 5.39242 NA intron (NM_001009571, intron 2 of 27) HERVL18-int|LTR|ERVL 6508 NM_139175 168433 Hs.126730 NM_139175 HPRD:11505 RNF133 - ring finger protein 133 protein-coding Atac153_MAPQ30_peak_3283 chr19 34162314 34162314 + 5.39242 NA intron (NM_001127895, intron 2 of 4) L2a|LINE|L2 -13120 NM_022467 64377 Hs.165724 NM_022467 HPRD:07632 CHST8 GALNAC4ST1|GalNAc4ST carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 protein-coding Atac153_MAPQ30_peak_6650 chr9 81891842 81891842 + 5.39242 NA Intergenic Intergenic -131261 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA Atac153_MAPQ30_peak_6196 chr7 151110643 151110643 + 5.39242 NA TTS (NR_034013) TTS (NR_034013) -2852 NM_001284261 349136 Hs.647083 NM_198285 HPRD:14183 WDR86 - WD repeat domain 86 protein-coding Atac153_MAPQ30_peak_5059 chr4 33964746 33964746 + 5.39242 NA Intergenic L1PA10|LINE|L1 -2280992 NR_122079 439933 Hs.591071 NR_122079 ENSG00000247193 LOC439933 - uncharacterized LOC439933 ncRNA Atac153_MAPQ30_peak_4728 chr3 58674418 58674418 + 5.39242 NA Intergenic Intergenic -21857 NM_138805 131177 Hs.61265 NM_138805 HPRD:12271 FAM3D EF7|OIT1 family with sequence similarity 3, member D protein-coding Atac153_MAPQ30_peak_252 chr1 48356217 48356217 + 5.39242 NA intron (NM_001194986, intron 2 of 6) intron (NM_001194986, intron 2 of 6) 106345 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding Atac153_MAPQ30_peak_3282 chr19 33923928 33923928 + 5.39242 NA intron (NM_001166056, intron 7 of 12) intron (NM_001166056, intron 7 of 12) 58498 NM_001252296 1054 Hs.429666 NM_001806 HPRD:00738 CEBPG GPE1BP|IG/EBP-1 CCAAT/enhancer binding protein (C/EBP), gamma protein-coding Atac153_MAPQ30_peak_7267 chrX 148172640 148172640 + 5.39242 NA Intergenic ERVL-E-int|LTR|ERVL 372025 NM_001170628 2334 Hs.496911 NM_002025 HPRD:02397 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family, member 2 protein-coding Atac153_MAPQ30_peak_1521 chr12 53039768 53039768 + 5.39242 NA intron (NM_000423, intron 7 of 8) intron (NM_000423, intron 7 of 8) 6191 NM_000423 3849 Hs.707 NM_000423 HPRD:02560 KRT2 CK-2e|K2e|KRT2A|KRT2E|KRTE keratin 2 protein-coding Atac153_MAPQ30_peak_4206 chr20 60548633 60548633 + 5.39242 NA Intergenic Intergenic -19915 NR_031658 100302168 NR_031658 miRBase:MI0006391 MIR1257 MIRN1257|hsa-mir-1257 microRNA 1257 ncRNA Atac153_MAPQ30_peak_3208 chr19 6766271 6766271 + 5.39242 NA intron (NM_005490, intron 1 of 9) intron (NM_005490, intron 1 of 9) 1252 NM_005490 10045 Hs.439645 NM_005490 HPRD:05283 SH2D3A NSP1 SH2 domain containing 3A protein-coding Atac153_MAPQ30_peak_6728 chr9 101498575 101498575 + 5.39242 NA 3' UTR (NM_173551, exon 15 of 15) 3' UTR (NM_173551, exon 15 of 15) -27096 NM_005458 9568 Hs.198612 NM_005458 HPRD:09552 GABBR2 GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099 gamma-aminobutyric acid (GABA) B receptor, 2 protein-coding Atac153_MAPQ30_peak_377 chr1 153582328 153582328 + 5.39242 NA intron (NM_080388, intron 1 of 2) intron (NM_080388, intron 1 of 2) 3186 NM_080388 140576 Hs.515714 NM_080388 HPRD:11529 S100A16 DT1P1A7|S100F S100 calcium binding protein A16 protein-coding Atac153_MAPQ30_peak_6949 chrX 21821307 21821307 + 5.39242 NA Intergenic Intergenic -36349 NM_015884 51360 Hs.443490 NM_015884 HPRD:02243 MBTPS2 BRESEK|IFAP|KFSD|KFSDX|OLMSX|S2P membrane-bound transcription factor peptidase, site 2 protein-coding Atac153_MAPQ30_peak_3391 chr2 5470298 5470298 + 5.39242 NA Intergenic Intergenic 360952 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA Atac153_MAPQ30_peak_5870 chr6 169732372 169732372 + 5.39242 NA Intergenic Intergenic -78163 NM_003247 7058 Hs.371147 NM_003247 HPRD:01766 THBS2 TSP2 thrombospondin 2 protein-coding Atac153_MAPQ30_peak_3987 chr20 3753397 3753397 + 5.39242 NA Intergenic MLT2B4|LTR|ERVL -4362 NR_047675 54976 Hs.274422 NM_017874 HPRD:16648 C20orf27 - chromosome 20 open reading frame 27 protein-coding Atac153_MAPQ30_peak_2631 chr16 87750129 87750129 + 5.39242 NA intron (NM_001184854, intron 5 of 9) L1MC3|LINE|L1 49469 NM_017566 54758 Hs.123450 NM_017566 HPRD:11180 KLHDC4 - kelch domain containing 4 protein-coding Atac153_MAPQ30_peak_2438 chr16 22885272 22885272 + 5.39242 NA intron (NM_006043, intron 1 of 1) MLT1H|LTR|ERVL-MaLR 59412 NM_006043 9956 Hs.115830 NM_006043 HPRD:04957 HS3ST2 30ST2|3OST2 heparan sulfate (glucosamine) 3-O-sulfotransferase 2 protein-coding Atac153_MAPQ30_peak_6622 chr9 37042421 37042421 + 5.39242 NA Intergenic Intergenic -7945 NR_103999 5079 Hs.654464 NM_016734 HPRD:01334 PAX5 ALL3|BSAP paired box 5 protein-coding Atac153_MAPQ30_peak_6882 chrX 1714914 1714914 + 5.39242 NA intron (NM_004043, intron 1 of 9).2 intron (NM_004043, intron 1 of 9).2 566 NM_004043 438 Hs.522572 NM_004043 HPRD:02058 ASMT ASMTY|HIOMT|HIOMTY acetylserotonin O-methyltransferase protein-coding Atac153_MAPQ30_peak_2620 chr16 86506361 86506361 + 5.39242 NA Intergenic MLT1J|LTR|ERVL-MaLR 36105 NR_036444 400550 Hs.448825 NR_033925 ENSG00000268388 FENDRR FOXF1-AS1|TCONS_00024240|lincFOXF1 FOXF1 adjacent non-coding developmental regulatory RNA ncRNA Atac153_MAPQ30_peak_4822 chr3 127114631 127114631 + 5.39242 NA Intergenic Intergenic -5118 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LOC101927123 - uncharacterized LOC101927123 ncRNA Atac153_MAPQ30_peak_6300 chr8 20434426 20434426 + 5.39242 NA Intergenic Intergenic 301142 NR_047509 100874051 Hs.385799 NR_047509 ENSG00000253733 LZTS1-AS1 - LZTS1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3941 chr2 239552823 239552823 + 5.39242 NA Intergenic Intergenic -88683 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA Atac153_MAPQ30_peak_4075 chr20 34061917 34061917 + 5.39242 NA intron (NM_007186, intron 14 of 34) intron (NM_007186, intron 14 of 34) 18694 NM_007186 11190 Hs.443976 NM_007186 HPRD:09877 CEP250 C-NAP1|CEP2|CNAP1 centrosomal protein 250kDa protein-coding Atac153_MAPQ30_peak_81 chr1 14689578 14689578 + 5.39242 NA Intergenic Intergenic -235635 NM_015209 23254 Hs.368823 NM_015209 HPRD:11122 KAZN KAZ kazrin, periplakin interacting protein protein-coding Atac153_MAPQ30_peak_6450 chr8 104191958 104191958 + 5.39242 NA intron (NM_001024372, intron 1 of 1) L2b|LINE|L2 -7590 NR_109954 100499183 Hs.654812 NR_034092 ENSG00000247081 BAALC-AS1 - BAALC antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4443 chr22 38692266 38692266 + 5.39242 NA intron (NM_001289912, intron 11 of 14) intron (NM_001289912, intron 11 of 14) 21147 NM_152221 1454 Hs.474833 NM_001894 HPRD:02919 CSNK1E CKIepsilon|HCKIE casein kinase 1, epsilon protein-coding Atac153_MAPQ30_peak_4270 chr21 38676989 38676989 + 5.39242 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -37156 NM_006052 10311 Hs.369488 NM_006052 HPRD:10390 DSCR3 DCRA|DSCRA Down syndrome critical region gene 3 protein-coding Atac153_MAPQ30_peak_3357 chr19 57001919 57001919 + 5.39242 NA intron (NR_036521, intron 1 of 1) MLT1D|LTR|ERVL-MaLR 12426 NR_036522 100128252 Hs.23133 NM_198879 ENSG00000166770 ZNF667-AS1 - ZNF667 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_3870 chr2 218612783 218612783 + 5.39242 NA intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 8533 NR_026597 729582 Hs.572788 NR_026597 ENSG00000231672 DIRC3 - disrupted in renal carcinoma 3 ncRNA Atac153_MAPQ30_peak_4191 chr20 58562588 58562588 + 5.39242 NA exon (NM_177980, exon 8 of 18) exon (NM_177980, exon 8 of 18) -8829 NM_021810 60437 Hs.729046 NM_021810 HPRD:13020 CDH26 VR20 cadherin 26 protein-coding Atac153_MAPQ30_peak_1834 chr13 80857921 80857921 + 5.39242 NA Intergenic Intergenic 57165 NM_005842 10253 Hs.18676 NM_005842 HPRD:03916 SPRY2 hSPRY2 sprouty homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_3826 chr2 200604490 200604490 + 5.39242 NA Intergenic Intergenic 111406 NR_034096 348751 Hs.734578 NR_034096 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like ncRNA Atac153_MAPQ30_peak_5081 chr4 53917485 53917485 + 5.39242 NA intron (NM_152540, intron 5 of 8) MLT1J2|LTR|ERVL-MaLR 188990 NM_023940 65997 Hs.8035 NM_023940 HPRD:15216 RASL11B - RAS-like, family 11, member B protein-coding Atac153_MAPQ30_peak_3273 chr19 31307702 31307702 + 5.39242 NA Intergenic Intergenic 444374 NM_014717 9745 Hs.378901 NM_014717 HPRD:15825 ZNF536 - zinc finger protein 536 protein-coding Atac153_MAPQ30_peak_3684 chr2 119767613 119767613 + 5.39242 NA Intergenic L2|LINE|L2 67868 NM_006770 8685 Hs.67726 NM_006770 HPRD:05337 MARCO SCARA2 macrophage receptor with collagenous structure protein-coding Atac153_MAPQ30_peak_4984 chr4 4745713 4745713 + 5.39242 NA Intergenic Intergenic -100451 NR_125765 103695434 Hs.550830 NR_125765 LINC01396 - long intergenic non-protein coding RNA 1396 ncRNA Atac153_MAPQ30_peak_5673 chr6 40488551 40488551 + 5.39242 NA intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 66575 NM_020737 57497 Hs.250015 NM_020737 HPRD:17444 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding Atac153_MAPQ30_peak_2716 chr17 14127991 14127991 + 5.39242 NA Intergenic Intergenic 12159 NM_001007530 146822 Hs.735172 NM_001007530 CDRT15 - CMT1A duplicated region transcript 15 protein-coding Atac153_MAPQ30_peak_2050 chr14 97064110 97064110 + 5.39242 NA Intergenic Intergenic 94908 NM_001293628 10914 Hs.253726 NM_032632 HPRD:10407 PAPOLA PAP poly(A) polymerase alpha protein-coding Atac153_MAPQ30_peak_5844 chr6 166353895 166353895 + 5.39242 NA non-coding (NR_026860, exon 2 of 2) non-coding (NR_026860, exon 2 of 2) -47144 NR_027284 441177 Hs.708964 NM_001013720 LINC00602 - long intergenic non-protein coding RNA 602 ncRNA Atac153_MAPQ30_peak_5531 chr5 177790413 177790413 + 5.39242 NA intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) -130590 NR_103509 85007 Hs.248746 NM_153373 HPRD:18482 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding Atac153_MAPQ30_peak_784 chr10 71721189 71721189 + 5.39242 NA Intergenic Intergenic -91168 NM_018649 55506 Hs.499953 NM_018649 HPRD:13625 H2AFY2 macroH2A2 H2A histone family, member Y2 protein-coding Atac153_MAPQ30_peak_5984 chr7 44752621 44752621 + 5.39242 NA Intergenic Intergenic -35544 NM_001300959 83637 Hs.77978 NM_031449 HPRD:13225 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger, MIZ-type containing 2 protein-coding Atac153_MAPQ30_peak_6730 chr9 101941578 101941578 + 5.39242 NA Intergenic Intergenic 42668 NM_033087 85365 Hs.40919 NM_033087 ALG2 CDGIi|NET38|hALPG2 ALG2, alpha-1,3/1,6-mannosyltransferase protein-coding Atac153_MAPQ30_peak_1530 chr12 54133984 54133984 + 5.39242 NA Intergenic Intergenic 11635 NR_104333 102216268 Hs.742074 NR_104332 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA Atac153_MAPQ30_peak_4726 chr3 58632349 58632349 + 5.39242 NA intron (NM_138805, intron 4 of 9) intron (NM_138805, intron 4 of 9) -19012 NM_001282714 11170 Hs.506357 NM_007177 HPRD:09753 FAM107A DRR1|TU3A family with sequence similarity 107, member A protein-coding Atac153_MAPQ30_peak_1709 chr12 126641830 126641830 + 5.39242 NA Intergenic Intergenic 61292 NR_110053 101927464 Hs.443932 NR_110053 ENSG00000256342 LOC101927464 - uncharacterized LOC101927464 ncRNA Atac153_MAPQ30_peak_1651 chr12 113752081 113752081 + 5.39242 NA intron (NM_024959, intron 11 of 15) intron (NM_024959, intron 11 of 15) 20844 NM_024959 80024 Hs.286194 NM_024959 HPRD:15354 SLC8B1 NCKX6|NCLX|SLC24A6 solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 protein-coding Atac153_MAPQ30_peak_4045 chr20 24458735 24458735 + 5.39242 NA intron (NM_024893, intron 1 of 3) intron (NM_024893, intron 1 of 3) 8900 NM_024893 79953 Hs.124638 NM_024893 HPRD:12766 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding Atac153_MAPQ30_peak_6516 chr8 139248740 139248740 + 5.39242 NA intron (NM_015912, intron 7 of 19) intron (NM_015912, intron 7 of 19) 260325 NM_015912 51059 Hs.126024 NM_015912 HPRD:14230 FAM135B C8ORFK32 family with sequence similarity 135, member B protein-coding Atac153_MAPQ30_peak_6965 chrX 30578336 30578336 + 5.39242 NA exon (NM_025159, exon 3 of 3) exon (NM_025159, exon 3 of 3) 17697 NM_025159 80231 Hs.665009 NM_025159 HPRD:06518 CXorf21 - chromosome X open reading frame 21 protein-coding Atac153_MAPQ30_peak_3240 chr19 16699292 16699292 + 5.39242 NA intron (NM_004831, intron 1 of 2) intron (NM_004831, intron 1 of 2) -16099 NM_024881 79939 Hs.620596 NM_024881 HPRD:15373 SLC35E1 - solute carrier family 35, member E1 protein-coding Atac153_MAPQ30_peak_725 chr10 43607843 43607843 + 5.39242 NA intron (NM_020630, intron 8 of 18) intron (NM_020630, intron 8 of 18) -26050 NM_018590 55454 Hs.657569 NM_018590 HPRD:11348 CSGALNACT2 CHGN2|GALNACT-2|GALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding Atac153_MAPQ30_peak_6883 chrX 1761601 1761601 + 5.39242 NA intron (NM_004043, intron 9 of 9).2 intron (NM_004043, intron 9 of 9).2 27575 NM_001171039 438 Hs.522572 NM_004043 HPRD:02058 ASMT ASMTY|HIOMT|HIOMTY acetylserotonin O-methyltransferase protein-coding Atac153_MAPQ30_peak_6249 chr8 1972486 1972486 + 5.39242 NA Intergenic Intergenic -20672 NM_003970 9172 Hs.443683 NM_003970 HPRD:04619 MYOM2 TTNAP myomesin 2 protein-coding Atac153_MAPQ30_peak_2753 chr17 21125617 21125617 + 5.39242 NA Intergenic Intergenic -7709 NM_003876 8834 Hs.592945 NM_003876 TMEM11 C17orf35|PM1|PMI transmembrane protein 11 protein-coding Atac153_MAPQ30_peak_4994 chr4 6367017 6367017 + 5.39242 NA intron (NM_020416, intron 5 of 8) intron (NM_020416, intron 5 of 8) 16580 NM_181876 5522 Hs.479069 NM_020416 HPRD:09345 PPP2R2C B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2, regulatory subunit B, gamma protein-coding Atac153_MAPQ30_peak_4833 chr3 128653756 128653756 + 5.39242 NA Intergenic Intergenic 55423 NM_014049 28976 Hs.567482 NM_014049 HPRD:12412 ACAD9 NPD002 acyl-CoA dehydrogenase family, member 9 protein-coding Atac153_MAPQ30_peak_1755 chr13 21094207 21094207 + 5.39242 NA intron (NM_015974, intron 1 of 7) L1MC5|LINE|L1 5805 NM_015974 51084 Hs.370703 NM_015974 HPRD:16762 CRYL1 GDH|HEL30|lambda-CRY crystallin, lambda 1 protein-coding Atac153_MAPQ30_peak_4062 chr20 31510062 31510062 + 5.39242 NA Intergenic L1MC|LINE|L1 82177 NM_080675 140732 Hs.375186 NM_080675 HPRD:15422 SUN5 SPAG4L|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding Atac153_MAPQ30_peak_7065 chrX 63666369 63666369 + 5.39242 NA Intergenic MIR|SINE|MIR -51036 NM_017677 55613 Hs.442892 NM_017677 HPRD:06664 MTMR8 - myotubularin related protein 8 protein-coding Atac153_MAPQ30_peak_2740 chr17 18180672 18180672 + 5.39242 NA intron (NM_004618, intron 18 of 18) MIRb|SINE|MIR 16248 NM_148886 125170 Hs.655555 NM_139162 HPRD:18074 MIEF2 MID49|SMCR7 mitochondrial elongation factor 2 protein-coding Atac153_MAPQ30_peak_4527 chr22 50682991 50682991 + 5.39242 NA TTS (NM_032019) TTS (NM_032019) 409 NM_020461 85378 Hs.336431 NM_020461 HPRD:15589 TUBGCP6 GCP-6|GCP6|MCCRP|MCPHCR tubulin, gamma complex associated protein 6 protein-coding Atac153_MAPQ30_peak_1433 chr12 3281650 3281650 + 5.39242 NA intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 95129 NM_006675 10867 Hs.504517 NM_006675 HPRD:14823 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding Atac153_MAPQ30_peak_3634 chr2 98273997 98273997 + 5.39242 NA intron (NM_005735, intron 8 of 10) intron (NM_005735, intron 8 of 10) 6564 NM_005735 10120 Hs.98791 NM_005735 HPRD:05508 ACTR1B ARP1B|CTRN2|PC3 ARP1 actin-related protein 1 homolog B, centractin beta (yeast) protein-coding Atac153_MAPQ30_peak_221 chr1 41920610 41920610 + 5.39242 NA Intergenic MIR|SINE|MIR 29734 NM_001956 1907 Hs.1407 NM_001956 HPRD:07173 EDN2 ET2|PPET2 endothelin 2 protein-coding Atac153_MAPQ30_peak_4211 chr20 61382225 61382225 + 5.39242 NA intron (NM_002531, intron 1 of 3) L1MA9|LINE|L1 25983 NR_046224 100652730 Hs.254951 NR_046224 LINC00659 - long intergenic non-protein coding RNA 659 ncRNA Atac153_MAPQ30_peak_5174 chr4 159305145 159305145 + 5.39242 NA Intergenic L2c|LINE|L2 -137721 NM_001253730 59350 Hs.591686 NM_021634 HPRD:05975 RXFP1 LGR7|RXFPR1 relaxin/insulin-like family peptide receptor 1 protein-coding Atac153_MAPQ30_peak_3173 chr18 77998728 77998728 + 5.39242 NA intron (NM_032510, intron 1 of 2) intron (NM_032510, intron 1 of 2) 6669 NM_032510 84552 Hs.654920 NM_032510 HPRD:10138 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding Atac153_MAPQ30_peak_3026 chr18 13837448 13837448 + 5.39242 NA Intergenic Intergenic 11905 NM_005913 4161 Hs.248145 NM_005913 HPRD:08965 MC5R MC2 melanocortin 5 receptor protein-coding Atac153_MAPQ30_peak_2023 chr14 90986508 90986508 + 5.39242 NA Intergenic Intergenic 64934 NR_033986 400238 Hs.131037 NR_033986 ENSG00000233208 LINC00642 - long intergenic non-protein coding RNA 642 ncRNA Atac153_MAPQ30_peak_3578 chr2 72319390 72319390 + 5.39242 NA Intergenic Intergenic 55601 NM_001277742 56603 Hs.91546 NM_019885 HPRD:05550 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450, family 26, subfamily B, polypeptide 1 protein-coding Atac153_MAPQ30_peak_3470 chr2 27680316 27680316 + 5.39242 NA intron (NM_015662, intron 29 of 47) AluJb|SINE|Alu 15083 NM_173853 200634 Hs.59509 NM_173853 HPRD:17254 KRTCAP3 KCP3|MRV222|PRO9898 keratinocyte associated protein 3 protein-coding Atac153_MAPQ30_peak_3313 chr19 42868473 42868473 + 5.39242 NA intron (NM_001271938, intron 35 of 41) intron (NM_001271938, intron 35 of 41) 13190 NR_107044 102465875 NR_107044 MIR8077 hsa-mir-8077 microRNA 8077 ncRNA Atac153_MAPQ30_peak_6942 chrX 20040961 20040961 + 5.39242 NA intron (NM_001168467, intron 9 of 15) MER3|DNA|hAT-Charlie -5656 NR_037414 100500809 NR_037414 MIR23C hsa-mir-23c microRNA 23c ncRNA Atac153_MAPQ30_peak_6487 chr8 131453213 131453213 + 5.39242 NA intron (NM_018482, intron 1 of 29) L2b|LINE|L2 2693 NM_001247996 50807 Hs.655552 NM_018482 HPRD:05809 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding Atac153_MAPQ30_peak_6953 chrX 23024800 23024800 + 5.39242 NA intron (NR_073010, intron 3 of 5) THE1B-int|LTR|ERVL-MaLR 6722 NM_182699 168400 Hs.434416 NM_182699 HPRD:06466 DDX53 CAGE|CT26 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 protein-coding Atac153_MAPQ30_peak_4236 chr21 19255518 19255518 + 5.39242 NA intron (NR_024354, intron 1 of 2) L4|LINE|RTE 2407 NR_024354 54075 Hs.404306 NR_024354 CHODL-AS1 C21orf39|NCRNA00157 CHODL antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3929 chr2 237940208 237940208 + 5.39242 NA Intergenic Intergenic -53876 NM_198189 10920 Hs.531713 NM_006710 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding Atac153_MAPQ30_peak_3317 chr19 44257339 44257339 + 5.39242 NA intron (NM_019108, intron 1 of 13) intron (NM_019108, intron 1 of 13) 1803 NM_019108 56006 Hs.466875 NM_019108 HPRD:07800 SMG9 C19orf61|F17127_1 SMG9 nonsense mediated mRNA decay factor protein-coding Atac153_MAPQ30_peak_656 chr10 7447507 7447507 + 5.39242 NA intron (NM_001029880, intron 1 of 20) intron (NM_001029880, intron 1 of 20) 3796 NM_001018039 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm-like with four mbt domains 2 protein-coding Atac153_MAPQ30_peak_6258 chr8 4705855 4705855 + 5.39242 NA intron (NM_033225, intron 1 of 69) Tigger3b|DNA|TcMar-Tigger 146473 NM_033225 64478 Hs.571466 NM_033225 HPRD:10523 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding Atac153_MAPQ30_peak_2135 chr15 40857322 40857322 + 5.39242 NA promoter-TSS (NM_052849) promoter-TSS (NM_052849) -66 NM_001080791 90416 Hs.654661 NM_052849 HPRD:14473 C15orf57 CCDC32 chromosome 15 open reading frame 57 protein-coding Atac153_MAPQ30_peak_7041 chrX 54027034 54027034 + 5.39242 NA intron (NM_001184897, intron 10 of 21) intron (NM_001184897, intron 10 of 21) 42593 NM_001184898 23133 Hs.133352 NM_015107 HPRD:06599 PHF8 JHDM1F|MRXSSD|ZNF422 PHD finger protein 8 protein-coding Atac153_MAPQ30_peak_23 chr1 4411235 4411235 + 5.39242 NA Intergenic Intergenic -60876 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LOC284661 - uncharacterized LOC284661 ncRNA Atac153_MAPQ30_peak_458 chr1 183754942 183754942 + 5.35620 NA intron (NM_001297670, intron 2 of 17) AluJr|SINE|Alu -19273 NM_001297671 23179 Hs.497148 NM_015149 HPRD:12032 RGL1 RGL ral guanine nucleotide dissociation stimulator-like 1 protein-coding Atac153_MAPQ30_peak_1908 chr14 36215085 36215085 + 5.35620 NA intron (NM_194301, intron 10 of 39) AluJr4|SINE|Alu 63265 NR_104269 26134 Hs.113150 NR_104269 RALGAPA1P GARNL2|GARNL2P|bA235C23.1 Ral GTPase activating protein, alpha subunit 1 (catalytic) pseudogene pseudo Atac153_MAPQ30_peak_4601 chr3 26056566 26056566 + 5.35620 NA Intergenic MIRb|SINE|MIR -141380 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA Atac153_MAPQ30_peak_5464 chr5 154974915 154974915 + 5.35620 NA Intergenic MLT1K|LTR|ERVL-MaLR 581655 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding Atac153_MAPQ30_peak_3832 chr2 201661492 201661492 + 5.35620 NA intron (NR_110275, intron 2 of 3) intron (NR_110275, intron 2 of 3) -14777 NM_014670 9689 Hs.355983 NM_014670 HPRD:16570 BZW1 BZAP45|Nbla10236 basic leucine zipper and W2 domains 1 protein-coding Atac153_MAPQ30_peak_690 chr10 23820469 23820469 + 5.35620 NA Intergenic Intergenic 92271 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding Atac153_MAPQ30_peak_6601 chr9 25641883 25641883 + 5.35440 NA Intergenic MLT1D|LTR|ERVL-MaLR 36973 NM_001004125 286319 Hs.26268 NM_001004125 HPRD:18247 TUSC1 TSG-9|TSG9 tumor suppressor candidate 1 protein-coding Atac153_MAPQ30_peak_719 chr10 42357740 42357740 + 5.33564 NA Intergenic (CATTC)n|Satellite|Satellite 505753 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo Atac153_MAPQ30_peak_5142 chr4 123393809 123393809 + 5.31519 NA Intergenic Tigger1|DNA|TcMar-Tigger -16159 NM_000586 3558 Hs.89679 NM_000586 IL2 IL-2|TCGF|lymphokine interleukin 2 protein-coding Atac153_MAPQ30_peak_3790 chr2 170017734 170017734 + 5.31519 NA intron (NM_004525, intron 63 of 78) MIRc|SINE|MIR 80117 NM_001142271 10170 Hs.179608 NM_005771 HPRD:09916 DHRS9 3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4 dehydrogenase/reductase (SDR family) member 9 protein-coding Atac153_MAPQ30_peak_6596 chr9 17862377 17862377 + 5.31082 NA Intergenic Intergenic 283425 NM_003026 6456 Hs.75149 NM_003026 HPRD:05125 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3-domain GRB2-like 2 protein-coding Atac153_MAPQ30_peak_1920 chr14 52654186 52654186 + 5.27992 NA Intergenic Intergenic -80245 NM_001281469 5729 Hs.306831 NM_000953 HPRD:05254 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor (DP) protein-coding Atac153_MAPQ30_peak_3784 chr2 168314970 168314970 + 5.27992 NA Intergenic L1MB3|LINE|L1 271177 NM_001199145 129446 Hs.73680 NM_152381 HPRD:10267 XIRP2 CMYA3 xin actin-binding repeat containing 2 protein-coding Atac153_MAPQ30_peak_212 chr1 38995414 38995414 + 5.26124 NA Intergenic Intergenic -314975 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA Atac153_MAPQ30_peak_315 chr1 109290092 109290092 + 5.26124 NA intron (NM_007269, intron 1 of 18) intron (NM_007269, intron 1 of 18) 807 NM_007269 6814 Hs.530436 NM_007269 HPRD:10517 STXBP3 MUNC18-3|MUNC18C|PSP|UNC-18C syntaxin binding protein 3 protein-coding Atac153_MAPQ30_peak_4796 chr3 117115333 117115333 + 5.26124 NA Intergenic L2a|LINE|L2 475055 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA Atac153_MAPQ30_peak_3126 chr18 59237124 59237124 + 5.26124 NA Intergenic Intergenic 79349 NM_031891 28316 Hs.671510 NM_031891 HPRD:10429 CDH20 CDH7L3|Cdh7 cadherin 20, type 2 protein-coding Atac153_MAPQ30_peak_5140 chr4 113322580 113322580 + 5.26124 NA intron (NM_001102406, intron 4 of 15) L2a|LINE|L2 104081 NM_025144 80216 Hs.652825 NM_025144 HPRD:09554 ALPK1 8430410J10Rik|LAK alpha-kinase 1 protein-coding Atac153_MAPQ30_peak_6773 chr9 117770676 117770676 + 5.26124 NA Intergenic Intergenic -77801 NM_001252290 944 Hs.494901 NM_001244 TNFSF8 CD153|CD30L|CD30LG tumor necrosis factor (ligand) superfamily, member 8 protein-coding Atac153_MAPQ30_peak_835 chr10 84640790 84640790 + 5.26124 NA intron (NM_001010848, intron 4 of 8) intron (NM_001010848, intron 4 of 8) -648114 NR_120666 101929590 Hs.733268 NR_120666 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_463 chr1 187366237 187366237 + 5.26124 NA Intergenic L1PA7|LINE|L1 568205 NM_024420 5321 Hs.497200 NM_024420 HPRD:08986 PLA2G4A PLA2G4|cPLA2-alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding Atac153_MAPQ30_peak_4618 chr3 34890327 34890327 + 5.20793 NA Intergenic AluJb|SINE|Alu 545188 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA Atac153_MAPQ30_peak_4863 chr3 137232533 137232533 + 5.16755 NA Intergenic Intergenic -250601 NM_004189 8403 Hs.248184 NM_004189 SOX14 SOX28 SRY (sex determining region Y)-box 14 protein-coding Atac153_MAPQ30_peak_4719 chr3 56309553 56309553 + 5.16755 NA intron (NM_015576, intron 3 of 16) MIRb|SINE|MIR 192838 NM_015576 26059 Hs.476389 NM_015576 HPRD:10810 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding Atac153_MAPQ30_peak_5085 chr4 54921419 54921419 + 5.16755 NA intron (NM_012110, intron 1 of 5) FLAM_A|SINE|Alu 9396 NM_012110 26511 Hs.335393 NM_012110 HPRD:10373 CHIC2 BTL cysteine-rich hydrophobic domain 2 protein-coding Atac153_MAPQ30_peak_2129 chr15 35078551 35078551 + 5.16755 NA intron (NR_120329, intron 2 of 2) intron (NR_120329, intron 2 of 2) 9376 NM_005159 70 Hs.118127 NM_005159 HPRD:00015 ACTC1 ACTC|ASD5|CMD1R|CMH11|LVNC4 actin, alpha, cardiac muscle 1 protein-coding Atac153_MAPQ30_peak_6741 chr9 110905195 110905195 + 5.16755 NA Intergenic Intergenic -653148 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel-like factor 4 (gut) protein-coding Atac153_MAPQ30_peak_1560 chr12 67411675 67411675 + 5.16755 NA Intergenic MLT1H|LTR|ERVL-MaLR 78389 NR_120490 102724421 Hs.135774 NR_120490 LOC102724421 - uncharacterized LOC102724421 ncRNA Atac153_MAPQ30_peak_3645 chr2 102354312 102354312 + 5.16755 NA intron (NM_145686, intron 2 of 30) intron (NM_145686, intron 2 of 30) 39774 NM_145687 9448 Hs.701013 NM_004834 HPRD:05235 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding Atac153_MAPQ30_peak_4909 chr3 170856663 170856663 + 5.16755 NA intron (NM_001161565, intron 13 of 30) intron (NM_001161565, intron 13 of 30) -32115 NR_030295 693154 NR_030295 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA Atac153_MAPQ30_peak_6574 chr9 986225 986225 + 5.16755 NA intron (NM_021240, intron 1 of 1) intron (NM_021240, intron 1 of 1) 9257 NM_021240 58524 Hs.189174 NM_021240 HPRD:16827 DMRT3 DMRTA3 doublesex and mab-3 related transcription factor 3 protein-coding Atac153_MAPQ30_peak_4768 chr3 76123288 76123288 + 5.15255 NA Intergenic Intergenic -288554 NM_001290210 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 X17|ZNF838 zinc finger protein 717 protein-coding Atac153_MAPQ30_peak_903 chr10 109659116 109659116 + 5.15255 NA intron (NR_125760, intron 4 of 4) intron (NR_125760, intron 4 of 4) 169935 NR_125760 103695365 Hs.648991 NR_125760 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA Atac153_MAPQ30_peak_4229 chr21 11126138 11126138 + 5.09074 NA Intergenic AluSx1|SINE|Alu -27201 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding Atac153_MAPQ30_peak_5043 chr4 22742851 22742851 + 5.07629 NA intron (NR_102356, intron 2 of 2) MLT1D|LTR|ERVL-MaLR 27139 NM_001277225 57733 Hs.653107 NM_020973 HPRD:09428 GBA3 CBG|CBGL1|GLUC|KLRP glucosidase, beta, acid 3 protein-coding Atac153_MAPQ30_peak_5702 chr6 51576183 51576183 + 5.07629 NA intron (NM_138694, intron 60 of 66) LTR16E2|LTR|ERVL 376240 NM_170724 5314 Hs.662050 NM_138694 HPRD:05987 PKHD1 ARPKD|FCYT|TIGM1 polycystic kidney and hepatic disease 1 (autosomal recessive) protein-coding Atac153_MAPQ30_peak_938 chr10 123066686 123066686 + 5.07629 NA Intergenic LTR16E2|LTR|ERVL 286795 NM_001144913 2263 Hs.533683 NM_000141 HPRD:01492 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding Atac153_MAPQ30_peak_5322 chr5 66303756 66303756 + 5.07629 NA intron (NM_001290227, intron 2 of 25) intron (NM_001290227, intron 2 of 25) 3308 NM_001290227 375449 Hs.595458 NM_015183 HPRD:14195 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding Atac153_MAPQ30_peak_806 chr10 77636873 77636873 + 5.07629 NA intron (NM_032024, intron 1 of 5) MIRb|SINE|MIR 94354 NM_032024 83938 Hs.118161 NM_032024 HPRD:12560 C10orf11 OCA5|OCA7 chromosome 10 open reading frame 11 protein-coding Atac153_MAPQ30_peak_3894 chr2 229829858 229829858 + 5.07575 NA Intergenic Intergenic 306199 NM_017933 55022 Hs.745038 NM_017933 HPRD:07944 PID1 NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding Atac153_MAPQ30_peak_906 chr10 110706717 110706717 + 5.06875 NA Intergenic Intergenic -223698 NR_046928 100873762 NR_046928 RNU6-53P RNU6-53 RNA, U6 small nuclear 53, pseudogene snRNA Atac153_MAPQ30_peak_3037 chr18 24955408 24955408 + 4.99616 NA Intergenic Intergenic -190106 NM_031422 83539 Hs.44584 NM_031422 ENSG00000154080 CHST9 GALNAC4ST-2 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 protein-coding Atac153_MAPQ30_peak_4593 chr3 16493424 16493424 + 4.98980 NA intron (NM_015150, intron 2 of 9) MER44C|DNA|TcMar-Tigger 61798 NM_015150 23180 Hs.98910 NM_015150 HPRD:17950 RFTN1 PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding Atac153_MAPQ30_peak_6119 chr7 127193423 127193423 + 4.98980 NA Intergenic L2|LINE|L2 32231 NM_024523 79571 Hs.521168 NM_024523 HPRD:07599 GCC1 GCC1P|GCC88 GRIP and coiled-coil domain containing 1 protein-coding Atac153_MAPQ30_peak_693 chr10 24457515 24457515 + 4.98980 NA intron (NM_001098500, intron 2 of 18) intron (NM_001098500, intron 2 of 18) -40205 NM_001282767 56243 Hs.445885 NM_019590 HPRD:11132 KIAA1217 SKT KIAA1217 protein-coding Atac153_MAPQ30_peak_4743 chr3 66633548 66633548 + 4.98980 NA Intergenic Intergenic -82703 NM_015541 26018 Hs.518055 NM_015541 HPRD:10057 LRIG1 LIG-1|LIG1 leucine-rich repeats and immunoglobulin-like domains 1 protein-coding Atac153_MAPQ30_peak_3125 chr18 59216867 59216867 + 4.98980 NA intron (NM_031891, intron 9 of 10) intron (NM_031891, intron 9 of 10) 59092 NM_031891 28316 Hs.671510 NM_031891 HPRD:10429 CDH20 CDH7L3|Cdh7 cadherin 20, type 2 protein-coding Atac153_MAPQ30_peak_3774 chr2 154086848 154086848 + 4.91990 NA Intergenic Intergenic 248474 NM_019845 56475 Hs.100890 NM_019845 HPRD:18002 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator candidate protein-coding Atac153_MAPQ30_peak_1305 chr11 105342137 105342137 + 4.90242 NA Intergenic Intergenic -138663 NM_000829 2893 Hs.503743 NM_000829 HPRD:00694 GRIA4 GLUR4|GLUR4C|GLURD|GluA4 glutamate receptor, ionotropic, AMPA 4 protein-coding Atac153_MAPQ30_peak_6598 chr9 18488219 18488219 + 4.90242 NA intron (NM_001040272, intron 1 of 28) intron (NM_001040272, intron 1 of 28) 14140 NM_001040272 92949 Hs.741483 NM_052866 HPRD:16462 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS-like 1 protein-coding Atac153_MAPQ30_peak_6635 chr9 74119456 74119456 + 4.90242 NA Intergenic Intergenic 264344 NM_013390 23670 Hs.494146 NM_013390 HPRD:09317 TMEM2 - transmembrane protein 2 protein-coding Atac153_MAPQ30_peak_5662 chr6 38532144 38532144 + 4.90242 NA intron (NM_001172418, intron 5 of 10) L2c|LINE|L2 31699 NM_001172418 114781 Hs.603858 NM_052893 HPRD:12543 BTBD9 dJ322I12.1 BTB (POZ) domain containing 9 protein-coding Atac153_MAPQ30_peak_431 chr1 172301867 172301867 + 4.90242 NA intron (NM_015569, intron 17 of 20) MLT1I|LTR|ERVL-MaLR -87961 NM_139240 92346 Hs.517991 NM_139240 HPRD:14291 C1orf105 - chromosome 1 open reading frame 105 protein-coding Atac153_MAPQ30_peak_5236 chr5 5928723 5928723 + 4.90242 NA Intergenic Intergenic 408682 NR_028351 401172 Hs.376760 NM_001001702 HPRD:16934 FLJ33360 - FLJ33360 protein ncRNA Atac153_MAPQ30_peak_5765 chr6 118096269 118096269 + 4.90242 NA Intergenic MIRb|SINE|MIR 99652 NM_138459 116150 Hs.289008 NM_138459 HPRD:12894 NUS1 C6orf68|MGC:7199|NgBR|TANGO14 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_1909 chr14 36523276 36523276 + 4.89773 NA Intergenic Intergenic -16357 NR_073454 101101773 Hs.640678 NR_073454 ENSG00000257585 LINC00609 - long intergenic non-protein coding RNA 609 ncRNA Atac153_MAPQ30_peak_5813 chr6 151284913 151284913 + 4.89773 NA intron (NM_001242768, intron 18 of 27) intron (NM_001242768, intron 18 of 27) 97444 NM_001242768 25902 Hs.591343 NM_015440 HPRD:09967 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein-coding Atac153_MAPQ30_peak_3745 chr2 133029686 133029686 + 4.86765 NA Intergenic AluSx|SINE|Alu -14144 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_4095 chr20 38421737 38421737 + 4.84616 NA Intergenic Intergenic -211366 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 - long intergenic non-protein coding RNA 1370 ncRNA Atac153_MAPQ30_peak_5712 chr6 63151372 63151372 + 4.84616 NA Intergenic L1PB1|LINE|L1 -155272 NM_152688 202559 Hs.519794 NM_152688 HPRD:13775 KHDRBS2 SLM-1|SLM1|bA535F17.1 KH domain containing, RNA binding, signal transduction associated 2 protein-coding Atac153_MAPQ30_peak_1372 chr11 125258012 125258012 + 4.84616 NA intron (NM_022062, intron 6 of 12) intron (NM_022062, intron 6 of 12) 108194 NM_005103 9638 Hs.224008 NM_005103 HPRD:09212 FEZ1 - fasciculation and elongation protein zeta 1 (zygin I) protein-coding Atac153_MAPQ30_peak_3812 chr2 181669822 181669822 + 4.84616 NA intron (NR_104324, intron 3 of 4) intron (NR_104324, intron 3 of 4) 112991 NR_104320 101669767 NR_104319 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_2803 chr17 33298540 33298540 + 4.84616 NA Intergenic L2c|LINE|L2 -8977 NM_002311 3980 Hs.100299 NM_002311 HPRD:02966 LIG3 LIG2 ligase III, DNA, ATP-dependent protein-coding Atac153_MAPQ30_peak_5574 chr6 5929873 5929873 + 4.84616 NA Intergenic Intergenic 74404 NM_001278711 51299 Hs.103291 NM_016588 HPRD:07592 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding Atac153_MAPQ30_peak_2299 chr15 88305540 88305540 + 4.82240 NA Intergenic Intergenic 185380 NR_026869 145978 Hs.350808 NM_152454 HPRD:08101 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA Atac153_MAPQ30_peak_5306 chr5 52054912 52054912 + 4.82240 NA Intergenic Intergenic -28862 NM_015946 53918 Hs.644352 NM_015946 PELO PRO1770 pelota homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_7312 chrY 58993965 58993965 + 4.82108 NA Intergenic BSR/Beta|Satellite|Satellite -106492 NM_005840 10251 Hs.381912 NM_005840 HPRD:03917 SPRY3 HSPRY3|spry-3 sprouty homolog 3 (Drosophila) protein-coding Atac153_MAPQ30_peak_3592 chr2 82103547 82103547 + 4.77433 NA Intergenic Intergenic -409477 NR_110161 100507201 Hs.98589 NR_110161 LOC100507201 - uncharacterized LOC100507201 ncRNA Atac153_MAPQ30_peak_613 chr1 243514421 243514421 + 4.77433 NA intron (NM_006642, intron 12 of 17) intron (NM_006642, intron 12 of 17) 4943 NR_039824 100616343 NR_039824 MIR4677 - microRNA 4677 ncRNA Atac153_MAPQ30_peak_417 chr1 164381844 164381844 + 4.73661 NA Intergenic MLT1A0-int|LTR|ERVL-MaLR -146753 NM_001204963 5087 Hs.557097 NM_002585 HPRD:08889 PBX1 - pre-B-cell leukemia homeobox 1 protein-coding Atac153_MAPQ30_peak_765 chr10 61034161 61034161 + 4.73661 NA intron (NM_001001971, intron 6 of 11) intron (NM_001001971, intron 6 of 11) 88191 NM_001001971 220965 Hs.607594 NM_198215 HPRD:16875 FAM13C FAM13C1 family with sequence similarity 13, member C protein-coding Atac153_MAPQ30_peak_1291 chr11 86117352 86117352 + 4.73661 NA intron (NM_021827, intron 6 of 13) L1MEe|LINE|L1 31574 NM_021827 60494 Hs.144913 NM_021827 HPRD:08032 CCDC81 - coiled-coil domain containing 81 protein-coding Atac153_MAPQ30_peak_836 chr10 85340568 85340568 + 4.73661 NA Intergenic L1PA16|LINE|L1 -558617 NM_014394 27069 Hs.352656 NM_014394 HPRD:17038 GHITM DERP2|HSPC282|MICS1|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding Atac153_MAPQ30_peak_5277 chr5 15487400 15487400 + 4.65257 NA Intergenic L2c|LINE|L2 -12905 NM_012304 23194 Hs.433057 NM_012304 HPRD:05740 FBXL7 FBL6|FBL7 F-box and leucine-rich repeat protein 7 protein-coding Atac153_MAPQ30_peak_2717 chr17 14629662 14629662 + 4.65257 NA Intergenic Intergenic -304630 NR_033371 94150 Hs.147654 NR_033371 ENSG00000259944 CDRT7 LINC00025|NCRNA00025 CMT1A duplicated region transcript 7 (non-protein coding) ncRNA Atac153_MAPQ30_peak_6677 chr9 90578023 90578023 + 4.65257 NA Intergenic Intergenic 11672 NM_001039803 23552 Hs.522274 NM_012119 HPRD:13010 CDK20 CCRK|CDCH|P42|PNQALRE cyclin-dependent kinase 20 protein-coding Atac153_MAPQ30_peak_1279 chr11 78420617 78420617 + 4.65257 NA intron (NM_001098816, intron 26 of 33) MER5A1|DNA|hAT-Charlie -134708 NM_024678 79731 Hs.503389 NM_024678 HPRD:08026 NARS2 SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial (putative) protein-coding Atac153_MAPQ30_peak_496 chr1 204742768 204742768 + 4.65257 NA Intergenic Intergenic -55014 NM_015090 23114 Hs.13349 NM_015090 HPRD:12372 NFASC NF|NRCAML neurofascin protein-coding Atac153_MAPQ30_peak_4612 chr3 33038302 33038302 + 4.65257 NA 3' UTR (NM_001135602, exon 13 of 13) 3' UTR (NM_001135602, exon 13 of 13) 45236 NM_005508 1233 Hs.184926 NM_005508 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 chemokine (C-C motif) receptor 4 protein-coding Atac153_MAPQ30_peak_2419 chr16 16726846 16726846 + 4.65257 NA Intergenic Intergenic 253744 NM_001282511 101059953 Hs.636569 NM_001282511 NPIPA8 LCR16a9 nuclear pore complex interacting protein family, member A8 protein-coding Atac153_MAPQ30_peak_3576 chr2 72119938 72119938 + 4.65257 NA Intergenic Kanga1a|DNA|TcMar-Tc2 255053 NM_001277742 56603 Hs.91546 NM_019885 HPRD:05550 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450, family 26, subfamily B, polypeptide 1 protein-coding Atac153_MAPQ30_peak_2150 chr15 44245641 44245641 + 4.65257 NA intron (NR_104455, intron 1 of 14) intron (NR_104455, intron 1 of 14) -75272 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 pseudogene 1 pseudo Atac153_MAPQ30_peak_2796 chr17 32321390 32321390 + 4.65257 NA intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 162435 NM_001094 40 Hs.368417 NM_001094 HPRD:03471 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid-sensing (proton-gated) ion channel 2 protein-coding Atac153_MAPQ30_peak_3537 chr2 50499321 50499321 + 4.65257 NA intron (NM_001135659, intron 18 of 23) intron (NM_001135659, intron 18 of 23) 75573 NM_138735 9378 Hs.637685 NM_004801 HPRD:11858 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding Atac153_MAPQ30_peak_6379 chr8 53620233 53620233 + 4.65257 NA intron (NM_001083617, intron 1 of 23) intron (NM_001083617, intron 1 of 23) 6793 NM_001083617 9821 Hs.196102 NM_014781 HPRD:06019 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1-inducible coiled-coil 1 protein-coding Atac153_MAPQ30_peak_5947 chr7 29023290 29023290 + 4.65257 NA intron (NR_038965, intron 1 of 4) intron (NR_038965, intron 1 of 4) 3707 NR_038965 100506497 Hs.586328 NR_038965 ENSG00000272568 LOC100506497 - uncharacterized LOC100506497 ncRNA Atac153_MAPQ30_peak_6419 chr8 95262941 95262941 + 4.65257 NA intron (NM_005261, intron 4 of 4) intron (NM_005261, intron 4 of 4) 11606 NM_181702 2669 Hs.654463 NM_005261 HPRD:11553 GEM KIR GTP binding protein overexpressed in skeletal muscle protein-coding Atac153_MAPQ30_peak_3081 chr18 44991516 44991516 + 4.65257 NA Intergenic Intergenic -215962 NM_001278063 652991 Hs.585834 NM_001037802 ENSG00000215474 SKOR2 CORL2|FUSSEL18 SKI family transcriptional corepressor 2 protein-coding Atac153_MAPQ30_peak_2530 chr16 60161433 60161433 + 4.65257 NA Intergenic MER21-int|LTR|ERVL 232234 NM_001282301 729159 NM_001282301 LOC729159 - UPF0607 protein ENSP00000381418-like protein-coding Atac153_MAPQ30_peak_3040 chr18 29783852 29783852 + 4.65257 NA intron (NM_005925, intron 6 of 14) MSTA|LTR|ERVL-MaLR 13865 NM_005925 4225 Hs.194777 NM_005925 HPRD:02667 MEP1B - meprin A, beta protein-coding Atac153_MAPQ30_peak_6400 chr8 66861598 66861598 + 4.65257 NA Intergenic Intergenic -72193 NM_033105 85479 Hs.491885 NM_033105 HPRD:07474 DNAJC5B CSP-beta DnaJ (Hsp40) homolog, subfamily C, member 5 beta protein-coding Atac153_MAPQ30_peak_5763 chr6 115520865 115520865 + 4.65257 NA Intergenic THE1D|LTR|ERVL-MaLR -839029 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo Atac153_MAPQ30_peak_5857 chr6 168167756 168167756 + 4.65257 NA Intergenic Intergenic 29783 NR_026773 26238 Hs.520583 NM_014356 HPRD:12846 C6orf123 HGC6.2|dJ431P23.4 chromosome 6 open reading frame 123 ncRNA Atac153_MAPQ30_peak_3028 chr18 19015486 19015486 + 4.65257 NA intron (NM_001142966, intron 7 of 32) L2c|LINE|L2 165207 NM_052911 114799 Hs.464733 NM_052911 HPRD:16868 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding Atac153_MAPQ30_peak_4967 chr4 2893679 2893679 + 4.65257 NA intron (NM_001286645, intron 5 of 17) L3|LINE|CR1 42285 NM_001120 10227 Hs.632581 NM_001120 HPRD:10265 MFSD10 TETRAN|TETTRAN major facilitator superfamily domain containing 10 protein-coding Atac153_MAPQ30_peak_1942 chr14 62186569 62186569 + 4.65257 NA intron (NM_001243084, intron 1 of 14) intron (NM_001243084, intron 1 of 14) 22229 NM_001243084 3091 Hs.597216 NM_001530 HPRD:04517 HIF1A HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) protein-coding Atac153_MAPQ30_peak_3783 chr2 167574746 167574746 + 4.65257 NA Intergenic L1MB1|LINE|L1 -170251 NM_001199143 129446 Hs.73680 NM_152381 HPRD:10267 XIRP2 CMYA3 xin actin-binding repeat containing 2 protein-coding Atac153_MAPQ30_peak_902 chr10 109029155 109029155 + 4.65257 NA Intergenic Intergenic -104689 NM_001013031 114815 Hs.591915 NM_052918 HPRD:12098 SORCS1 hSorCS sortilin-related VPS10 domain containing receptor 1 protein-coding Atac153_MAPQ30_peak_1289 chr11 83537239 83537239 + 4.65257 NA intron (NM_001364, intron 12 of 22) intron (NM_001364, intron 12 of 22) -143771 NM_001142702 1740 Hs.367656 NM_001364 HPRD:04663 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs, large homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_6036 chr7 67017293 67017293 + 4.65257 NA Intergenic Intergenic 216330 NR_108104 101929736 Hs.634050 NR_108104 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA Atac153_MAPQ30_peak_1052 chr11 5876575 5876575 + 4.65257 NA Intergenic Intergenic 2357 NM_001005168 390079 Hs.553738 NM_001005168 HPRD:15013 OR52E8 OR11-54 olfactory receptor, family 52, subfamily E, member 8 protein-coding Atac153_MAPQ30_peak_2709 chr17 10785318 10785318 + 4.65257 NA Intergenic L2a|LINE|L2 -43900 NM_001101387 644139 Hs.553909 NM_001101387 ENSG00000233670 PIRT - phosphoinositide-interacting regulator of transient receptor potential channels protein-coding Atac153_MAPQ30_peak_6473 chr8 125815073 125815073 + 4.65257 NA Intergenic Intergenic -74325 NM_001282974 9788 Hs.336994 NM_014751 HPRD:12243 MTSS1 MIM|MIMA|MIMB metastasis suppressor 1 protein-coding Atac153_MAPQ30_peak_5913 chr7 7951204 7951204 + 4.65257 NA Intergenic Intergenic -57170 NM_138426 113263 Hs.131673 NM_138426 HPRD:17043 GLCCI1 FAM117C|GCTR|GIG18|TSSN1 glucocorticoid induced transcript 1 protein-coding Atac153_MAPQ30_peak_4227 chr21 11115594 11115594 + 4.61535 NA Intergenic AluSx3|SINE|Alu -16657 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding Atac153_MAPQ30_peak_1827 chr13 62516191 62516191 + 4.58134 NA Intergenic SATR1|Satellite|Satellite 87490 NR_046995 100874143 Hs.552684 NR_046995 LINC00358 - long intergenic non-protein coding RNA 358 ncRNA Atac153_MAPQ30_peak_4861 chr3 136965385 136965385 + 4.58134 NA Intergenic Intergenic 288678 NM_144717 53833 Hs.61232 NM_144717 HPRD:14594 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor beta protein-coding Atac153_MAPQ30_peak_1579 chr12 93303525 93303525 + 4.57314 NA intron (NM_003566, intron 1 of 28) AluJb|SINE|Alu 19582 NM_003566 8411 Hs.567367 NM_003566 HPRD:05460 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding Atac153_MAPQ30_peak_5824 chr6 158398870 158398870 + 4.57314 NA Intergenic Intergenic -4018 NM_003898 8871 Hs.434494 NM_003898 HPRD:10259 SYNJ2 INPP5H synaptojanin 2 protein-coding Atac153_MAPQ30_peak_920 chr10 117730585 117730585 + 4.57314 NA Intergenic Intergenic 301234 NM_145793 2674 Hs.388347 NM_005264 HPRD:03291 GFRA1 GDNFR|GDNFRA|GFR-ALPHA-1|RET1L|RETL1|TRNR1 GDNF family receptor alpha 1 protein-coding Atac153_MAPQ30_peak_5319 chr5 65518898 65518898 + 4.57314 NA Intergenic L1PA8|LINE|L1 78235 NM_139168 140890 Hs.49367 NM_139168 HPRD:18043 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamine/lysine-rich protein 1 protein-coding Atac153_MAPQ30_peak_562 chr1 228467730 228467730 + 4.57314 NA exon (NM_052843, exon 28 of 81) exon (NM_052843, exon 28 of 81) -66365 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 C1orf145 - chromosome 1 open reading frame 145 ncRNA Atac153_MAPQ30_peak_4613 chr3 33360200 33360200 + 4.57314 NA intron (NM_012157, intron 2 of 14) intron (NM_012157, intron 2 of 14) 41263 NM_001171713 25827 Hs.475872 NM_012157 HPRD:05736 FBXL2 FBL2|FBL3 F-box and leucine-rich repeat protein 2 protein-coding Atac153_MAPQ30_peak_5432 chr5 142309683 142309683 + 4.57314 NA intron (NM_015071, intron 10 of 22) MER5A|DNA|hAT-Charlie -61208 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2015 chr14 88992254 88992254 + 4.57314 NA intron (NM_007039, intron 2 of 18) L1MB5|LINE|L1 28869 NM_007039 11099 Hs.437040 NM_007039 HPRD:04468 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase, non-receptor type 21 protein-coding Atac153_MAPQ30_peak_5854 chr6 168064754 168064754 + 4.57314 NA Intergenic Intergenic 15149 NR_117091 401286 Hs.487182 NR_117091 LOC401286 - uncharacterized LOC401286 ncRNA Atac153_MAPQ30_peak_6527 chr8 140514677 140514677 + 4.57314 NA Intergenic Intergenic 200622 NR_104210 51305 Hs.493037 NM_001282534 HPRD:16167 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium channel, subfamily K, member 9 protein-coding Atac153_MAPQ30_peak_3878 chr2 220481230 220481230 + 4.57314 NA TTS (NM_052902) TTS (NM_052902) -11062 NM_005070 6508 Hs.1176 NM_005070 HPRD:00109 SLC4A3 AE3|SLC2C solute carrier family 4 (anion exchanger), member 3 protein-coding Atac153_MAPQ30_peak_3697 chr2 121612153 121612153 + 4.57314 NA intron (NM_005270, intron 1 of 12) intron (NM_005270, intron 1 of 12) 57286 NM_005270 2736 Hs.111867 NM_005270 HPRD:01312 GLI2 HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding Atac153_MAPQ30_peak_1137 chr11 33944410 33944410 + 4.57314 NA Intergenic Intergenic -30574 NM_005574 4005 Hs.34560 NM_005574 HPRD:01586 LMO2 RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 (rhombotin-like 1) protein-coding Atac153_MAPQ30_peak_4927 chr3 183758452 183758452 + 4.57314 NA Intergenic Intergenic 7833 NM_001163646 200909 Hs.448004 NM_182537 HPRD:17121 HTR3D 5HT3D 5-hydroxytryptamine (serotonin) receptor 3D, ionotropic protein-coding Atac153_MAPQ30_peak_6363 chr8 42911160 42911160 + 4.57314 NA promoter-TSS (NM_002027) promoter-TSS (NM_002027) -282 NR_033698 2339 Hs.370312 NM_002027 HPRD:00607 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding Atac153_MAPQ30_peak_2266 chr15 77946548 77946548 + 4.57314 NA intron (NM_001301195, intron 3 of 3) MLT1I|LTR|ERVL-MaLR -5845 NR_120361 101929478 Hs.569510 NR_120361 ENSG00000259281 LOC101929478 - uncharacterized LOC101929478 ncRNA Atac153_MAPQ30_peak_5023 chr4 10091476 10091476 + 4.57314 NA intron (NM_005112, intron 2 of 11) MLT1C|LTR|ERVL-MaLR -11160 NR_036090 100423011 NR_036090 MIR3138 - microRNA 3138 ncRNA Atac153_MAPQ30_peak_2686 chr17 7124634 7124634 + 4.57314 NA intron (NM_001270447, intron 7 of 20) intron (NM_001270447, intron 7 of 20) -1265 NM_001365 1742 Hs.463928 NM_001365 HPRD:04199 DLG4 PSD95|SAP-90|SAP90 discs, large homolog 4 (Drosophila) protein-coding Atac153_MAPQ30_peak_5427 chr5 140021500 140021500 + 4.57314 NA exon (NM_001300980, exon 4 of 12) exon (NM_001300980, exon 4 of 12) 2488 NM_001300982 55374 Hs.534333 NM_018502 HPRD:15177 TMCO6 - transmembrane and coiled-coil domains 6 protein-coding Atac153_MAPQ30_peak_4780 chr3 107544720 107544720 + 4.57314 NA Intergenic Intergenic 52195 NR_024276 151658 Hs.159043 NR_015414 ENSG00000241469 LINC00635 - long intergenic non-protein coding RNA 635 ncRNA Atac153_MAPQ30_peak_648 chr10 5415633 5415633 + 4.57314 NA intron (NM_053049, intron 1 of 1) intron (NM_053049, intron 1 of 1) 8657 NM_053049 114131 Hs.511775 NM_053049 HPRD:12066 UCN3 SCP|SPC|UCNIII urocortin 3 protein-coding Atac153_MAPQ30_peak_6272 chr8 9409837 9409837 + 4.57314 NA Intergenic Intergenic -3608 NM_003747 8658 Hs.370267 NM_003747 HPRD:04490 TNKS ARTD5|PARP-5a|PARP5A|PARPL|TIN1|TINF1|TNKS1|pART5 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein-coding Atac153_MAPQ30_peak_5390 chr5 127277316 127277316 + 4.57314 NA Intergenic Intergenic 141450 NR_015360 644873 Hs.340623 NR_015360 ENSG00000245937 LINC01184 - long intergenic non-protein coding RNA 1184 ncRNA Atac153_MAPQ30_peak_6541 chr8 142486640 142486640 + 4.57314 NA intron (NM_207414, intron 12 of 29) L2a|LINE|L2 30690 NM_207414 389690 Hs.689547 NM_207414 HPRD:13480 MROH5 - maestro heat-like repeat family member 5 protein-coding Atac153_MAPQ30_peak_34 chr1 5562676 5562676 + 4.57314 NA Intergenic Intergenic -61455 NR_039612 100616489 NR_039612 miRBase:MI0016753 MIR4417 - microRNA 4417 ncRNA Atac153_MAPQ30_peak_487 chr1 203272847 203272847 + 4.57314 NA intron (NR_034150, intron 1 of 2) intron (NR_034150, intron 1 of 2) 1606 NR_034151 730227 Hs.293928 NR_034150 ENSG00000233791 LINC01136 - long intergenic non-protein coding RNA 1136 ncRNA Atac153_MAPQ30_peak_6404 chr8 74348264 74348264 + 4.57314 NA intron (NM_001164381, intron 12 of 13) intron (NM_001164381, intron 12 of 13) 15955 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6946 chrX 21000086 21000086 + 4.57314 NA Intergenic Intergenic -392450 NM_001168649 22866 Hs.555917 NM_014927 HPRD:06473 CNKSR2 CNK2|KSR2|MAGUIN connector enhancer of kinase suppressor of Ras 2 protein-coding Atac153_MAPQ30_peak_4100 chr20 40666319 40666319 + 4.57314 NA Intergenic Intergenic -419186 NM_032221 84181 Hs.740645 NM_032221 HPRD:13049 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding Atac153_MAPQ30_peak_893 chr10 106021722 106021722 + 4.57314 NA intron (NM_001191002, intron 3 of 4) MLT1N2|LTR|ERVL-MaLR 6441 NR_039702 100616323 NR_039702 MIR4482 MIR4482-1|hsa-mir-4482-1 microRNA 4482 ncRNA Atac153_MAPQ30_peak_2162 chr15 53852163 53852163 + 4.57314 NA intron (NR_102334, intron 18 of 19) intron (NR_102334, intron 18 of 19) -18863 NR_102335 256764 Hs.122125 NM_182758 HPRD:10987 WDR72 AI2A3 WD repeat domain 72 protein-coding Atac153_MAPQ30_peak_5153 chr4 141270874 141270874 + 4.57314 NA intron (NM_001153635, intron 2 of 4) L2b|LINE|L2 6259 NM_001153690 60592 Hs.480815 NM_032547 HPRD:18027 SCOC SCOCO short coiled-coil protein protein-coding Atac153_MAPQ30_peak_4245 chr21 32997662 32997662 + 4.57314 NA Intergenic Intergenic -34273 NM_000454 6647 Hs.443914 NM_000454 HPRD:00937 SOD1 ALS|ALS1|HEL-S-44|IPOA|SOD|hSod1|homodimer superoxide dismutase 1, soluble protein-coding Atac153_MAPQ30_peak_1626 chr12 109641417 109641417 + 4.57314 NA intron (NM_001093, intron 18 of 51) L2a|LINE|L2 64215 NM_001093 32 Hs.234898 NM_001093 HPRD:07044 ACACB ACC2|ACCB|HACC275 acetyl-CoA carboxylase beta protein-coding Atac153_MAPQ30_peak_2856 chr17 47990770 47990770 + 4.57314 NA Intergenic Intergenic -55792 NM_138281 1748 Hs.591167 NM_001934 HPRD:03553 DLX4 BP1|DLX7|DLX8|DLX9 distal-less homeobox 4 protein-coding Atac153_MAPQ30_peak_3637 chr2 98960703 98960703 + 4.57314 NA Intergenic Intergenic -1915 NM_001079878 1261 Hs.234785 NM_001298 HPRD:02504 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding Atac153_MAPQ30_peak_5366 chr5 107796726 107796726 + 4.57314 NA Intergenic Intergenic -78927 NM_001163315 64839 Hs.657225 NM_022824 HPRD:10950 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine-rich repeat protein 17 protein-coding Atac153_MAPQ30_peak_3061 chr18 35388570 35388570 + 4.57314 NA Intergenic MER21C|LTR|ERVL 151472 NR_036202 100422857 NR_036202 miRBase:MI0015847 MIR4318 - microRNA 4318 ncRNA Atac153_MAPQ30_peak_2459 chr16 27234124 27234124 + 4.57314 NA Intergenic Intergenic 18828 NM_001145348 79831 Hs.145717 NM_024773 HPRD:07836 KDM8 JMJD5 lysine (K)-specific demethylase 8 protein-coding Atac153_MAPQ30_peak_3328 chr19 47425426 47425426 + 4.57314 NA exon (NM_004491, exon 1 of 6) exon (NM_004491, exon 1 of 6) 3493 NM_004491 2909 Hs.509447 NM_004491 HPRD:05592 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding Atac153_MAPQ30_peak_2265 chr15 77862167 77862167 + 4.57314 NA Intergenic Intergenic 62702 NM_032808 84894 Hs.656765 NM_032808 HPRD:14322 LINGO1 LERN1|LRRN6A|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding Atac153_MAPQ30_peak_4388 chr22 30019728 30019728 + 4.57314 NA intron (NM_181831, intron 1 of 14) intron (NM_181831, intron 1 of 14) 20183 NM_181832 4771 Hs.187898 NM_000268 HPRD:06980 NF2 ACN|BANF|SCH neurofibromin 2 (merlin) protein-coding Atac153_MAPQ30_peak_2922 chr17 71997895 71997895 + 4.57314 NA Intergenic Intergenic -173219 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA Atac153_MAPQ30_peak_1850 chr13 98954502 98954502 + 4.57314 NA intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 93724 NR_036129 100422881 NR_036129 miRBase:MI0014201 MIR3170 - microRNA 3170 ncRNA Atac153_MAPQ30_peak_7064 chrX 63653627 63653627 + 4.57314 NA Intergenic Intergenic -38294 NM_017677 55613 Hs.442892 NM_017677 HPRD:06664 MTMR8 - myotubularin related protein 8 protein-coding Atac153_MAPQ30_peak_3678 chr2 114456795 114456795 + 4.57314 NA Intergenic Intergenic 22150 NR_039943 100616208 NR_039943 MIR4782 - microRNA 4782 ncRNA Atac153_MAPQ30_peak_3798 chr2 174412092 174412092 + 4.57314 NA Intergenic Intergenic 192531 NM_145810 83879 Hs.470654 NM_031942 HPRD:09874 CDCA7 JPO1 cell division cycle associated 7 protein-coding Atac153_MAPQ30_peak_3820 chr2 195022124 195022124 + 4.57314 NA Intergenic HERVP71A-int|LTR|ERV1 -186869 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LOC101927406 - uncharacterized LOC101927406 ncRNA Atac153_MAPQ30_peak_7088 chrX 69363272 69363272 + 4.57314 NA intron (NM_001551, intron 3 of 6) intron (NM_001551, intron 3 of 6) 9954 NM_001551 3476 Hs.496267 NM_001551 HPRD:02140 IGBP1 ALPHA-4|IBP1 immunoglobulin (CD79A) binding protein 1 protein-coding Atac153_MAPQ30_peak_529 chr1 214250312 214250312 + 4.57314 NA Intergenic Intergenic 88468 NM_002763 5629 Hs.741808 NM_002763 HPRD:03330 PROX1 - prospero homeobox 1 protein-coding Atac153_MAPQ30_peak_3024 chr18 13532574 13532574 + 4.57314 NA intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) 72628 NR_049822 100847080 NR_049822 MIR5190 - microRNA 5190 ncRNA Atac153_MAPQ30_peak_6765 chr9 117019089 117019089 + 4.57314 NA intron (NM_032888, intron 27 of 60) MIR|SINE|MIR 47375 NR_030255 619556 NR_030255 MIR455 MIRN455|hsa-mir-455 microRNA 455 ncRNA Atac153_MAPQ30_peak_2147 chr15 43784433 43784433 + 4.57314 NA intron (NM_001141979, intron 2 of 27) intron (NM_001141979, intron 2 of 27) 921 NM_001141980 7158 Hs.440968 NM_005657 HPRD:05569 TP53BP1 53BP1|p202 tumor protein p53 binding protein 1 protein-coding Atac153_MAPQ30_peak_4476 chr22 45445030 45445030 + 4.57314 NA Intergenic Intergenic -39221 NM_001135862 112885 Hs.254097 NM_138415 HPRD:13997 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding Atac153_MAPQ30_peak_1165 chr11 45131649 45131649 + 4.57314 NA intron (NR_046338, intron 2 of 7) intron (NR_046338, intron 2 of 7) 16085 NR_046338 56981 Hs.178715 NM_020229 HPRD:11456 PRDM11 PFM8 PR domain containing 11 protein-coding Atac153_MAPQ30_peak_1632 chr12 110070180 110070180 + 4.57314 NA Intergenic Intergenic 58680 NM_001114185 4598 Hs.130607 NM_000431 HPRD:02015 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding Atac153_MAPQ30_peak_6094 chr7 101418632 101418632 + 4.57314 NA Intergenic Intergenic -40552 NM_001913 1523 Hs.191482 NM_001913 HPRD:00295 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GOLIM6|Nbla10317|p100|p110|p200|p75 cut-like homeobox 1 protein-coding Atac153_MAPQ30_peak_5564 chr6 3746369 3746369 + 4.57314 NA intron (NM_183373, intron 1 of 4) intron (NM_183373, intron 1 of 4) 5877 NM_183373 221749 Hs.484500 NM_183373 HPRD:12854 PXDC1 C6orf145 PX domain containing 1 protein-coding Atac153_MAPQ30_peak_3936 chr2 238586800 238586800 + 4.57314 NA intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) -14007 NM_004735 9208 Hs.471779 NM_004735 HPRD:04460 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP leucine rich repeat (in FLII) interacting protein 1 protein-coding Atac153_MAPQ30_peak_3548 chr2 61400027 61400027 + 4.57314 NA Intergenic Intergenic -4528 NM_152392 130872 Hs.655602 NM_152392 HPRD:16479 AHSA2 Hch1 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) protein-coding Atac153_MAPQ30_peak_7181 chrX 119157059 119157059 + 4.57314 NA Intergenic Intergenic 54648 NM_001099685 727940 Hs.196956 NM_001099685 RHOXF2B - Rhox homeobox family, member 2B protein-coding Atac153_MAPQ30_peak_607 chr1 239971554 239971554 + 4.57314 NA intron (NM_000740, intron 3 of 4) intron (NM_000740, intron 3 of 4) -89135 NR_103776 100506915 Hs.667175 NR_103776 ENSG00000233355 CHRM3-AS2 - CHRM3 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_4464 chr22 43615980 43615980 + 4.57314 NA intron (NM_173050, intron 14 of 21) intron (NM_173050, intron 14 of 21) -32843 NM_015140 23170 Hs.517670 NM_015140 HPRD:13782 TTLL12 dJ526I14.2 tubulin tyrosine ligase-like family, member 12 protein-coding Atac153_MAPQ30_peak_851 chr10 88309195 88309195 + 4.57314 NA Intergenic MLT1A-int|LTR|ERVL-MaLR -27654 NM_015045 23063 Hs.203099 NM_015045 HPRD:11072 WAPAL FOE|KIAA0261|WAPL wings apart-like homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_4334 chr22 18422269 18422269 + 4.57314 NA intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) -32617 NM_001136004 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding Atac153_MAPQ30_peak_3519 chr2 45114130 45114130 + 4.57314 NA Intergenic MER117|DNA|hAT-Charlie 54516 NR_103785 100506108 Hs.503113 NR_103785 ENSG00000236502 SIX3-AS1 - SIX3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4649 chr3 41499057 41499057 + 4.57314 NA intron (NM_017886, intron 33 of 36) intron (NM_017886, intron 33 of 36) 258115 NM_001098209 1499 Hs.476018 NM_001904 HPRD:00286 CTNNB1 CTNNB|MRD19|armadillo catenin (cadherin-associated protein), beta 1, 88kDa protein-coding Atac153_MAPQ30_peak_491 chr1 204106950 204106950 + 4.57314 NA intron (NM_001297761, intron 4 of 6) MER5B|DNA|hAT-Charlie -3586 NR_123739 101929441 Hs.736889 NR_123739 LOC101929441 - uncharacterized LOC101929441 ncRNA Atac153_MAPQ30_peak_4410 chr22 33249182 33249182 + 4.57314 NA intron (NM_000362, intron 2 of 4) intron (NM_000362, intron 2 of 4) 52380 NM_000362 7078 Hs.644633 NM_000362 HPRD:01785 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding Atac153_MAPQ30_peak_5571 chr6 5142488 5142488 + 4.57314 NA intron (NR_104417, intron 2 of 3) MLT1G3|LTR|ERVL-MaLR 6068 NR_037462 100500900 NR_037462 MIR3691 - microRNA 3691 ncRNA Atac153_MAPQ30_peak_7090 chrX 70351372 70351372 + 4.57314 NA intron (NM_005120, intron 28 of 44) intron (NM_005120, intron 28 of 44) 12966 NM_005120 9968 Hs.409226 NM_005120 HPRD:02176 MED12 ARC240|CAGH45|FGS1|HOPA|MED12S|OHDOX|OKS|OPA1|TNRC11|TRAP230 mediator complex subunit 12 protein-coding Atac153_MAPQ30_peak_2316 chr15 92014045 92014045 + 4.57314 NA intron (NR_110106, intron 1 of 3) L2|LINE|L2 7476 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 LOC101926928 - uncharacterized LOC101926928 ncRNA Atac153_MAPQ30_peak_1120 chr11 19951472 19951472 + 4.57314 NA intron (NM_182964, intron 6 of 37) L2c|LINE|L2 -92630 NM_001111019 89797 Hs.64341 NM_145117 HPRD:07385 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding Atac153_MAPQ30_peak_4308 chr21 44276052 44276052 + 4.57314 NA intron (NR_048535, intron 6 of 10) intron (NR_048535, intron 6 of 10) 23333 NM_001260477 10785 Hs.248815 NM_018669 HPRD:09330 WDR4 TRM82|TRMT82 WD repeat domain 4 protein-coding Atac153_MAPQ30_peak_3758 chr2 135619834 135619834 + 4.57314 NA intron (NM_138326, intron 4 of 9) intron (NM_138326, intron 4 of 9) 23648 NM_138326 130013 Hs.655728 NM_138326 HPRD:12326 ACMSD - aminocarboxymuconate semialdehyde decarboxylase protein-coding Atac153_MAPQ30_peak_4862 chr3 137051493 137051493 + 4.57314 NA Intergenic MLT1H|LTR|ERVL-MaLR 374786 NM_144717 53833 Hs.61232 NM_144717 HPRD:14594 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor beta protein-coding Atac153_MAPQ30_peak_1838 chr13 91542341 91542341 + 4.57314 NA TTS (NR_027039) TTS (NR_027039) 36510 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA Atac153_MAPQ30_peak_1338 chr11 116996930 116996930 + 4.57314 NA Intergenic LTR88b|LTR|Gypsy? -18070 NR_110268 5049 Hs.728488 NM_002572 HPRD:03940 PAFAH1B2 HEL-S-303 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) protein-coding Atac153_MAPQ30_peak_4993 chr4 6349630 6349630 + 4.57314 NA exon (NM_181876, exon 6 of 9) exon (NM_181876, exon 6 of 9) 33967 NM_181876 5522 Hs.479069 NM_020416 HPRD:09345 PPP2R2C B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2, regulatory subunit B, gamma protein-coding Atac153_MAPQ30_peak_3077 chr18 44200652 44200652 + 4.57314 NA intron (NM_144612, intron 4 of 39) L3|LINE|CR1 36344 NM_144612 125336 Hs.345877 NM_144612 HPRD:08316 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding Atac153_MAPQ30_peak_792 chr10 72902040 72902040 + 4.57314 NA Intergenic ERVL-E-int|LTR|ERVL -70252 NM_001244889 219699 Hs.522997 NM_170744 HPRD:08487 UNC5B UNC5H2|p53RDL1 unc-5 homolog B (C. elegans) protein-coding Atac153_MAPQ30_peak_6693 chr9 94419084 94419084 + 4.57314 NA Intergenic LTR84b|LTR|ERVL -20457 NR_037489 100500902 NR_037489 MIR3910-2 - microRNA 3910-2 ncRNA Atac153_MAPQ30_peak_316 chr1 109677510 109677510 + 4.57314 NA intron (NM_001284352, intron 1 of 20) intron (NM_001284352, intron 1 of 20) 20925 NM_001267048 57535 Hs.708190 NM_020775 KIAA1324 EIG121 KIAA1324 protein-coding Atac153_MAPQ30_peak_2868 chr17 53443606 53443606 + 4.57314 NA Intergenic Intergenic 55735 NM_012329 23531 Hs.463483 NM_012329 HPRD:06835 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation-associated protein-coding Atac153_MAPQ30_peak_2888 chr17 61602512 61602512 + 4.57314 NA intron (NM_001278919, intron 2 of 12) MER5A|DNA|hAT-Charlie 1817 NM_173092 81033 Hs.591177 NM_030779 HPRD:16294 KCNH6 ERG-2|ERG2|HERG2|Kv11.2|hERG-2 potassium voltage-gated channel, subfamily H (eag-related), member 6 protein-coding Atac153_MAPQ30_peak_1695 chr12 124986721 124986721 + 4.57314 NA intron (NM_001077261, intron 2 of 47) intron (NM_001077261, intron 2 of 47) 65289 NM_006312 9612 Hs.137510 NM_006312 HPRD:02910 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding Atac153_MAPQ30_peak_5425 chr5 139491860 139491860 + 4.57314 NA Intergenic Intergenic -1848 NM_005859 5813 Hs.443121 NM_005859 PURA PUR-ALPHA|PUR1|PURALPHA purine-rich element binding protein A protein-coding Atac153_MAPQ30_peak_4158 chr20 50287311 50287311 + 4.57314 NA intron (NM_006045, intron 12 of 27) MIR|SINE|MIR 97597 NM_006045 10079 Hs.649234 NM_006045 HPRD:18541 ATP9A ATPIIA ATPase, class II, type 9A protein-coding Atac153_MAPQ30_peak_5477 chr5 167212775 167212775 + 4.57314 NA intron (NM_001122679, intron 2 of 28) intron (NM_001122679, intron 2 of 28) 446602 NR_109894 101927862 Hs.659376 NR_109894 ENSG00000253978 CTB-178M22.2 - uncharacterized LOC101927862 ncRNA Atac153_MAPQ30_peak_4968 chr4 2911966 2911966 + 4.57314 NA intron (NM_001286645, intron 14 of 17) intron (NM_001286645, intron 14 of 17) 23998 NM_001120 10227 Hs.632581 NM_001120 HPRD:10265 MFSD10 TETRAN|TETTRAN major facilitator superfamily domain containing 10 protein-coding Atac153_MAPQ30_peak_5440 chr5 147048068 147048068 + 4.57314 NA intron (NM_001282282, intron 1 of 20) intron (NM_001282282, intron 1 of 20) 108511 NR_038902 153469 Hs.184323 NR_038902 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_90 chr1 15812049 15812049 + 4.57314 NA intron (NM_015849, intron 5 of 7) MLT1K|LTR|ERVL-MaLR 9453 NM_015849 51032 Hs.631871 NM_015849 HPRD:06496 CELA2B ELA2B chymotrypsin-like elastase family, member 2B protein-coding Atac153_MAPQ30_peak_6627 chr9 38008021 38008021 + 4.57314 NA intron (NM_003028, intron 2 of 5) intron (NM_003028, intron 2 of 5) 61189 NM_003028 6461 Hs.521482 NM_003028 SHB bA3J10.2 Src homology 2 domain containing adaptor protein B protein-coding Atac153_MAPQ30_peak_2714 chr17 12945512 12945512 + 4.57314 NA Intergenic MER41E|LTR|ERV1 -24131 NM_001165962 60528 Hs.434232 NM_018127 HPRD:05641 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding Atac153_MAPQ30_peak_237 chr1 45038970 45038970 + 4.57314 NA intron (NM_018150, intron 2 of 14) intron (NM_018150, intron 2 of 14) 27805 NR_049849 100847089 NR_049849 MIR5584 - microRNA 5584 ncRNA Atac153_MAPQ30_peak_386 chr1 155249079 155249079 + 4.57314 NA intron (NR_073074, intron 1 of 7) intron (NR_073074, intron 1 of 7) 1861 NM_020897 57657 Hs.706960 NM_020897 HPRD:17093 HCN3 - hyperpolarization activated cyclic nucleotide-gated potassium channel 3 protein-coding Atac153_MAPQ30_peak_1903 chr14 24941934 24941934 + 4.57314 NA intron (NR_110032, intron 2 of 2) ERVL-B4-int|LTR|ERVL 29775 NR_110032 101927045 Hs.637772 NR_110032 LOC101927045 - uncharacterized LOC101927045 ncRNA Atac153_MAPQ30_peak_6848 chr9 137712707 137712707 + 4.57314 NA intron (NM_001278074, intron 58 of 65) intron (NM_001278074, intron 58 of 65) 28508 NR_039691 100616333 NR_039691 miRBase:MI0016832 MIR3689C - microRNA 3689c ncRNA Atac153_MAPQ30_peak_2159 chr15 51579669 51579669 + 4.57314 NA intron (NM_000103, intron 1 of 9) intron (NM_000103, intron 1 of 9) 45282 NR_039863 100616369 NR_039863 miRBase:MI0017347 MIR4713 - microRNA 4713 ncRNA Atac153_MAPQ30_peak_2222 chr15 70037922 70037922 + 4.57314 NA Intergenic MIRc|SINE|MIR -89651 NR_026764 414926 Hs.569502 NR_026764 ENSG00000259703 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA Atac153_MAPQ30_peak_5287 chr5 31706251 31706251 + 4.57314 NA Intergenic L2a|LINE|L2 -92780 NM_178140 23037 Hs.481819 NM_015022 HPRD:10142 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding Atac153_MAPQ30_peak_3914 chr2 235495093 235495093 + 4.57314 NA Intergenic MIR|SINE|MIR -89396 NM_001282431 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding Atac153_MAPQ30_peak_2588 chr16 81643062 81643062 + 4.57314 NA intron (NM_198390, intron 2 of 20) intron (NM_198390, intron 2 of 20) -1891 NR_106759 102465251 NR_106759 MIR6504 hsa-mir-6504 microRNA 6504 ncRNA Atac153_MAPQ30_peak_2758 chr17 21221582 21221582 + 4.57314 NA Intergenic Intergenic 30234 NM_002756 5606 Hs.514012 NM_002756 HPRD:03816 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding Atac153_MAPQ30_peak_5698 chr6 45985481 45985481 + 4.57314 NA intron (NM_001114086, intron 1 of 5) intron (NM_001114086, intron 1 of 5) -1855 NM_016929 53405 Hs.485489 NM_016929 HPRD:06292 CLIC5 MST130|MSTP130 chloride intracellular channel 5 protein-coding Atac153_MAPQ30_peak_6973 chrX 35162349 35162349 + 4.57314 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 201436 NM_152631 170062 Hs.197801 NM_152631 HPRD:06559 FAM47B - family with sequence similarity 47, member B protein-coding Atac153_MAPQ30_peak_3439 chr2 19024970 19024970 + 4.57314 NA Intergenic Intergenic -254124 NM_001199088 93034 Hs.744358 NM_033253 HPRD:11405 NT5C1B AIRP|CN-IB|CN1B 5'-nucleotidase, cytosolic IB protein-coding Atac153_MAPQ30_peak_4982 chr4 4372318 4372318 + 4.57314 NA Intergenic MLT1D|LTR|ERVL-MaLR -15665 NM_001040101 27065 Hs.518595 NM_014392 HPRD:09624 NSG1 D4S234|D4S234E|NEEP21|P21 neuron specific gene family member 1 protein-coding Atac153_MAPQ30_peak_298 chr1 90222730 90222730 + 4.57314 NA Intergenic Intergenic -63843 NM_001134479 55144 Hs.482087 NM_018103 HPRD:11287 LRRC8D LRRC5 leucine rich repeat containing 8 family, member D protein-coding Atac153_MAPQ30_peak_7034 chrX 52080103 52080103 + 4.57314 NA promoter-TSS (NR_107055) promoter-TSS (NR_107055) -319 NR_107055 102466880 NR_107055 MIR8088 hsa-mir-8088 microRNA 8088 ncRNA Atac153_MAPQ30_peak_2870 chr17 54908865 54908865 + 4.57314 NA intron (NM_001085430, intron 2 of 7) L2b|LINE|L2 2391 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding Atac153_MAPQ30_peak_4628 chr3 37945009 37945009 + 4.57314 NA intron (NM_001008392, intron 1 of 7) intron (NM_001008392, intron 1 of 7) 41340 NM_005808 10217 Hs.475963 NM_005808 ENSG00000144677 CTDSPL C3orf8|HYA22|PSR1|RBSP3|SCP3 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like protein-coding Atac153_MAPQ30_peak_4276 chr21 39531040 39531040 + 4.57314 NA Intergenic Intergenic 37495 NR_026839 84677 Hs.733345 NM_032589 HPRD:10924 DSCR8 C21orf65|CT25.1a|CT25.1b|MMA-1|MMA-1a|MMA-1b|MMA1|MTAG2 Down syndrome critical region gene 8 ncRNA Atac153_MAPQ30_peak_5087 chr4 55495283 55495283 + 4.57314 NA Intergenic AluSz|SINE|Alu -28812 NM_000222 3815 Hs.479754 NM_000222 HPRD:01287 KIT C-Kit|CD117|PBT|SCFR v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog protein-coding Atac153_MAPQ30_peak_6334 chr8 33667314 33667314 + 4.57314 NA Intergenic Intergenic -209875 NM_024025 78986 Hs.8719 NM_024025 HPRD:14421 DUSP26 DUSP24|LDP-4|MKP8|NATA1|SKRP3 dual specificity phosphatase 26 (putative) protein-coding Atac153_MAPQ30_peak_6340 chr8 36779394 36779394 + 4.57314 NA intron (NM_001031836, intron 23 of 26) MER5A1|DNA|hAT-Charlie 137552 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium channel, subfamily U, member 1 protein-coding Atac153_MAPQ30_peak_1815 chr13 51640040 51640040 + 4.57314 NA intron (NR_003923, intron 1 of 16) intron (NR_003923, intron 1 of 16) 253 NR_003923 2974 Hs.411573 NM_004129 HPRD:07542 GUCY1B2 GC-SB2 guanylate cyclase 1, soluble, beta 2 (pseudogene) pseudo Atac153_MAPQ30_peak_1931 chr14 57311023 57311023 + 4.57314 NA intron (NR_029385, intron 1 of 3) intron (NR_029385, intron 1 of 3) 31122 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_4494 chr22 47147067 47147067 + 4.57314 NA Intergenic Intergenic -11447 NM_001284303 25771 Hs.435044 NM_014346 HPRD:15474 TBC1D22A C22orf4|HSC79E021 TBC1 domain family, member 22A protein-coding Atac153_MAPQ30_peak_2674 chr17 5383058 5383058 + 4.57314 NA intron (NM_016041, intron 6 of 6) intron (NM_016041, intron 6 of 6) 6436 NM_016041 51009 Hs.286131 NM_016041 DERL2 F-LAN-1|F-LANa|FLANa derlin 2 protein-coding Atac153_MAPQ30_peak_1119 chr11 19883212 19883212 + 4.57314 NA intron (NM_182964, intron 3 of 37) MIRb|SINE|MIR -101583 NR_039843 100616426 NR_039843 miRBase:MI0017327 MIR4694 - microRNA 4694 ncRNA Atac153_MAPQ30_peak_2379 chr16 8589190 8589190 + 4.57314 NA intron (NR_110736, intron 1 of 1) intron (NR_110736, intron 1 of 1) -1362 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding Atac153_MAPQ30_peak_976 chr10 128152924 128152924 + 4.57314 NA intron (NM_001004298, intron 4 of 8) intron (NM_001004298, intron 4 of 8) -42476 NR_073453 101101772 Hs.562258 NR_073453 ENSG00000235180 LINC00601 - long intergenic non-protein coding RNA 601 ncRNA Atac153_MAPQ30_peak_1974 chr14 72216294 72216294 + 4.57314 NA Intergenic Intergenic 162006 NM_001284247 26037 Hs.654657 NM_015556 HPRD:11559 SIPA1L1 E6TP1 signal-induced proliferation-associated 1 like 1 protein-coding Atac153_MAPQ30_peak_5258 chr5 10157225 10157225 + 4.57314 NA Intergenic MSTD-int|LTR|ERVL-MaLR 92796 NR_047669 134145 Hs.481569 NM_199133 FAM173B JS-2 family with sequence similarity 173, member B protein-coding Atac153_MAPQ30_peak_1676 chr12 120624766 120624766 + 4.57314 NA intron (NM_006836, intron 2 of 57) intron (NM_006836, intron 2 of 57) 7747 NM_006836 10985 Hs.298716 NM_006836 HPRD:16127 GCN1L1 GCN1|GCN1L|PRIC295 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) protein-coding Atac153_MAPQ30_peak_948 chr10 124953763 124953763 + 4.57314 NA Intergenic Intergenic 40003 NM_004725 9184 Hs.418533 NM_004725 HPRD:04761 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding Atac153_MAPQ30_peak_4478 chr22 45655677 45655677 + 4.57314 NA Intergenic L2b|LINE|L2 -19027 NM_001009880 23313 Hs.592207 NM_015264 HPRD:12802 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding Atac153_MAPQ30_peak_4507 chr22 48536875 48536875 + 4.57314 NA Intergenic Intergenic -133301 NR_036172 100422916 NR_036172 miRBase:MI0014250 MIR3201 - microRNA 3201 ncRNA Atac153_MAPQ30_peak_50 chr1 7750982 7750982 + 4.57314 NA intron (NM_015215, intron 11 of 22) intron (NM_015215, intron 11 of 22) -80347 NM_004781 9341 Hs.66708 NM_004781 HPRD:04711 VAMP3 CEB vesicle-associated membrane protein 3 protein-coding Atac153_MAPQ30_peak_4939 chr3 187399315 187399315 + 4.57314 NA Intergenic Intergenic -11114 NM_001048 6750 Hs.12409 NM_001048 HPRD:08920 SST SMST somatostatin protein-coding Atac153_MAPQ30_peak_4561 chr3 11041170 11041170 + 4.57314 NA intron (NM_003042, intron 1 of 15) MIRb|SINE|MIR 6750 NM_003042 6529 Hs.443874 NM_003042 HPRD:00664 SLC6A1 GABATHG|GABATR|GAT1 solute carrier family 6 (neurotransmitter transporter), member 1 protein-coding Atac153_MAPQ30_peak_4004 chr20 15471670 15471670 + 4.57314 NA intron (NM_080676, intron 7 of 16) MIRb|SINE|MIR 294166 NM_001033087 140733 Hs.661576 NM_080676 HPRD:16640 MACROD2 C20orf133 MACRO domain containing 2 protein-coding Atac153_MAPQ30_peak_1987 chr14 74997234 74997234 + 4.57314 NA intron (NM_000428, intron 10 of 35) AluJb|SINE|Alu 36811 NM_194279 122961 Hs.291079 NM_194279 ISCA2 HBLD1|ISA2|c14_5557 iron-sulfur cluster assembly 2 protein-coding Atac153_MAPQ30_peak_3881 chr2 221705695 221705695 + 4.57314 NA Intergenic Intergenic 731315 NM_004438 2043 Hs.371218 NM_004438 HPRD:03719 EPHA4 HEK8|SEK|TYRO1 EPH receptor A4 protein-coding Atac153_MAPQ30_peak_1602 chr12 104063587 104063587 + 4.57314 NA intron (NM_017564, intron 21 of 68) intron (NM_017564, intron 21 of 68) 82518 NM_017564 55576 Hs.408249 NM_017564 HPRD:10542 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE stabilin 2 protein-coding Atac153_MAPQ30_peak_499 chr1 205019321 205019321 + 4.57314 NA intron (NM_005076, intron 1 of 22) intron (NM_005076, intron 1 of 22) 6981 NM_005076 6900 Hs.519220 NM_005076 HPRD:01826 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 (axonal) protein-coding Atac153_MAPQ30_peak_6210 chr7 153980881 153980881 + 4.57314 NA intron (NM_001290253, intron 1 of 5) intron (NM_001290253, intron 1 of 5) -21416 NM_001936 1804 Hs.490684 NM_001936 HPRD:00525 DPP6 DPPX|VF2 dipeptidyl-peptidase 6 protein-coding Atac153_MAPQ30_peak_5008 chr4 7705607 7705607 + 4.57314 NA intron (NM_020777, intron 13 of 26) intron (NM_020777, intron 13 of 26) -50210 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2073 chr14 101965975 101965975 + 4.57314 NA Intergenic MLT1J|LTR|ERVL-MaLR 56038 NR_002770 64150 Hs.525597 NR_002770 DIO3OS C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041 DIO3 opposite strand/antisense RNA (head to head) ncRNA Atac153_MAPQ30_peak_149 chr1 25501964 25501964 + 4.57314 NA Intergenic MIR|SINE|MIR 57049 NM_015484 25949 Hs.20013 NM_015484 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA-splicing factor protein-coding Atac153_MAPQ30_peak_819 chr10 80128162 80128162 + 4.57314 NA Intergenic Intergenic 101077 NR_073447 414243 Hs.55047 NR_073447 ENSG00000227136 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA Atac153_MAPQ30_peak_3842 chr2 206687061 206687061 + 4.57314 NA Intergenic MIR|SINE|MIR 139837 NM_201264 8828 Hs.471200 NM_003872 HPRD:03643 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding Atac153_MAPQ30_peak_935 chr10 122042485 122042485 + 4.57314 NA Intergenic Intergenic -173981 NM_001030059 196051 Hs.40479 NM_001030059 HPRD:18745 PPAPDC1A DPPL2|PPAPDC1 phosphatidic acid phosphatase type 2 domain containing 1A protein-coding Atac153_MAPQ30_peak_2908 chr17 66424922 66424922 + 4.57314 NA intron (NM_017983, intron 10 of 12) intron (NM_017983, intron 10 of 12) -4233 NR_030365 693220 NR_030365 MIR635 MIRN635|hsa-mir-635 microRNA 635 ncRNA Atac153_MAPQ30_peak_5954 chr7 32246307 32246307 + 4.57314 NA intron (NM_001191058, intron 2 of 18) intron (NM_001191058, intron 2 of 18) 92709 NM_001191058 5137 Hs.728862 NM_005020 HPRD:04287 PDE1C Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C, calmodulin-dependent 70kDa protein-coding Atac153_MAPQ30_peak_767 chr10 61438855 61438855 + 4.57314 NA intron (NM_194298, intron 2 of 5) intron (NM_194298, intron 2 of 5) 30794 NM_194298 220963 Hs.499709 NM_194298 HPRD:15348 SLC16A9 C10orf36|MCT9 solute carrier family 16, member 9 protein-coding Atac153_MAPQ30_peak_5545 chr5 179731422 179731422 + 4.57314 NA intron (NM_005110, intron 17 of 18) MER21C|LTR|ERVL -12351 NM_139068 5601 Hs.484371 NM_002752 HPRD:04206 MAPK9 JNK-55|JNK2|JNK2A|JNK2ALPHA|JNK2B|JNK2BETA|PRKM9|SAPK|SAPK1a|p54a|p54aSAPK mitogen-activated protein kinase 9 protein-coding Atac153_MAPQ30_peak_210 chr1 38727129 38727129 + 4.57314 NA Intergenic Intergenic -46690 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA Atac153_MAPQ30_peak_3368 chr2 776594 776594 + 4.57314 NA Intergenic Intergenic 87518 NR_033880 339822 Hs.651879 NR_033880 ENSG00000237667 LINC01115 - long intergenic non-protein coding RNA 1115 ncRNA Atac153_MAPQ30_peak_3516 chr2 43622406 43622406 + 4.57314 NA intron (NM_022065, intron 29 of 37) intron (NM_022065, intron 29 of 37) 168056 NR_027251 100129726 Hs.194480 NM_178529 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA Atac153_MAPQ30_peak_6130 chr7 129646625 129646625 + 4.57314 NA Intergenic Intergenic 44666 NM_001282190 51530 Hs.194157 NM_016478 ENSG00000091732 ZC3HC1 NIPA zinc finger, C3HC-type containing 1 protein-coding Atac153_MAPQ30_peak_7252 chrX 144249656 144249656 + 4.57314 NA Intergenic Intergenic -79451 NM_001009614 494118 Hs.551270 NM_001009614 SPANXN1 CT11.6 SPANX family, member N1 protein-coding Atac153_MAPQ30_peak_7261 chrX 147173949 147173949 + 4.57314 NA Intergenic L1PA16|LINE|L1 111100 NM_152578 158521 Hs.128580 NM_152578 HPRD:06546 FMR1NB CT37|NY-SAR-35|NYSAR35 fragile X mental retardation 1 neighbor protein-coding Atac153_MAPQ30_peak_5398 chr5 132487423 132487423 + 4.57314 NA Intergenic Intergenic 99761 NM_002154 3308 Hs.90093 NM_002154 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock 70kDa protein 4 protein-coding Atac153_MAPQ30_peak_4485 chr22 46691815 46691815 + 4.57314 NA promoter-TSS (NM_016426) promoter-TSS (NM_016426) 742 NR_024009 150384 Hs.348663 NR_024009 GTSE1-AS1 CN5H6.4 GTSE1 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_4073 chr20 33703414 33703414 + 4.57314 NA exon (NM_018217, exon 11 of 11) exon (NM_018217, exon 11 of 11) -22796 NM_015638 26133 Hs.168073 NM_015638 HPRD:09238 TRPC4AP C20orf188|PPP1R158|TRRP4AP|TRUSS transient receptor potential cation channel, subfamily C, member 4 associated protein protein-coding Atac153_MAPQ30_peak_5943 chr7 28190030 28190030 + 4.57314 NA intron (NM_175061, intron 1 of 4) Charlie18a|DNA|hAT-Charlie -30046 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2769 chr17 21313817 21313817 + 4.57314 NA intron (NM_021012, intron 2 of 2) intron (NM_021012, intron 2 of 2) 5369 NM_001194958 100134444 Hs.200629 NM_001194958 KCNJ18 KIR2.6|TTPP2 potassium inwardly-rectifying channel, subfamily J, member 18 protein-coding Atac153_MAPQ30_peak_5719 chr6 75917278 75917278 + 4.57314 NA Intergenic Intergenic -1655 NM_004370 1303 Hs.101302 NM_004370 HPRD:00377 COL12A1 BA209D8.1|COL12A1L|DJ234P15.1 collagen, type XII, alpha 1 protein-coding Atac153_MAPQ30_peak_3972 chr20 1967819 1967819 + 4.57314 NA intron (NM_001190899, intron 1 of 2) L2|LINE|L2 5633 NM_001190892 5173 Hs.22584 NM_024411 HPRD:08838 PDYN ADCA|PENKB|SCA23 prodynorphin protein-coding Atac153_MAPQ30_peak_3672 chr2 110105456 110105456 + 4.57314 NA intron (NM_001099289, intron 8 of 9) intron (NM_001099289, intron 8 of 9) -175375 NR_036224 100423027 NR_036224 miRBase:MI0015870 MIR4266 - microRNA 4266 ncRNA Atac153_MAPQ30_peak_925 chr10 118623407 118623407 + 4.57314 NA intron (NM_001242699, intron 7 of 13) MIR|SINE|MIR 14384 NM_001242699 387712 Hs.693248 NM_001242699 ENSG00000188316 ENO4 C10orf134 enolase family member 4 protein-coding Atac153_MAPQ30_peak_2572 chr16 74785564 74785564 + 4.57314 NA intron (NM_024306, intron 1 of 6) intron (NM_024306, intron 1 of 6) 23165 NM_024306 79152 Hs.461329 NM_024306 HPRD:16873 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding Atac153_MAPQ30_peak_394 chr1 156821505 156821505 + 4.57314 NA exon (NM_014215, exon 4 of 22) exon (NM_014215, exon 4 of 22) 7207 NM_014215 3645 Hs.248138 NM_014215 HPRD:00976 INSRR IRR insulin receptor-related receptor protein-coding Atac153_MAPQ30_peak_3070 chr18 43864383 43864383 + 4.57314 NA Intergenic MIRb|SINE|MIR -49804 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|RNF111L2 ring finger protein 165 protein-coding Atac153_MAPQ30_peak_521 chr1 212804273 212804273 + 4.57314 NA Intergenic Intergenic 6484 NM_153606 149647 Hs.129293 NM_153606 HPRD:08735 FAM71A - family with sequence similarity 71, member A protein-coding Atac153_MAPQ30_peak_6898 chrX 8626011 8626011 + 4.57314 NA intron (NM_000216, intron 2 of 13) LTR16E1|LTR|ERVL 74216 NM_000216 3730 Hs.521869 NM_000216 HPRD:02393 KAL1 ADMLX|HH1|HHA|KAL|KALIG-1|KMS|WFDC19 Kallmann syndrome 1 sequence protein-coding Atac153_MAPQ30_peak_1877 chr13 112699287 112699287 + 4.57314 NA intron (NR_120392, intron 1 of 3) (TG)n|Simple_repeat|Simple_repeat -22626 NM_005986 6656 Hs.202526 NM_005986 HPRD:03687 SOX1 - SRY (sex determining region Y)-box 1 protein-coding Atac153_MAPQ30_peak_4873 chr3 138984261 138984261 + 4.57314 NA Intergenic Intergenic -31897 NR_027070 140464 Hs.721270 NR_027070 PISRT1 NCRNA00195 polled intersex syndrome regulated transcript 1 (non-protein coding RNA) ncRNA Atac153_MAPQ30_peak_6538 chr8 142225789 142225789 + 4.57314 NA intron (NM_001286646, intron 6 of 7) intron (NM_001286646, intron 6 of 7) 12884 NM_001080431 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45, member 4 protein-coding Atac153_MAPQ30_peak_3181 chr19 1489688 1489688 + 4.57314 NA intron (NM_017573, intron 2 of 14) intron (NM_017573, intron 2 of 14) 761 NM_017573 54760 Hs.46884 NM_017573 ENSG00000115257 PCSK4 PC4|SPC5 proprotein convertase subtilisin/kexin type 4 protein-coding Atac153_MAPQ30_peak_3945 chr2 239769927 239769927 + 4.57314 NA intron (NM_001271893, intron 1 of 1) intron (NM_001271893, intron 1 of 1) 13254 NM_001271893 117581 Hs.422585 NM_057179 HPRD:09616 TWIST2 DERMO1|FFDD3|SETLSS|bHLHa39 twist family bHLH transcription factor 2 protein-coding Atac153_MAPQ30_peak_3782 chr2 162136713 162136713 + 4.57314 NA Intergenic MER21B|LTR|ERVL -25559 NR_110593 101929512 Hs.666488 NR_110593 LOC101929512 - uncharacterized LOC101929512 ncRNA Atac153_MAPQ30_peak_6494 chr8 133072053 133072053 + 4.57314 NA promoter-TSS (NM_001080399) promoter-TSS (NM_001080399) -426 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding Atac153_MAPQ30_peak_717 chr10 37923113 37923113 + 4.57314 NA Intergenic Intergenic -31254 NM_001190489 100288485 Hs.727092 NM_001190489 ENSG00000256892 MTRNR2L7 HN7 MT-RNR2-like 7 protein-coding Atac153_MAPQ30_peak_4697 chr3 52118145 52118145 + 4.57314 NA intron (NM_001161580, intron 9 of 9) intron (NM_001161580, intron 9 of 9) -19017 NR_027331 100128378 Hs.640106 NM_001123039 LINC00696 C3orf74 long intergenic non-protein coding RNA 696 ncRNA Atac153_MAPQ30_peak_248 chr1 47067417 47067417 + 4.57314 NA intron (NM_198973, intron 1 of 11) intron (NM_198973, intron 1 of 11) 2549 NM_198973 8569 Hs.371594 NM_003684 HPRD:09468 MKNK1 MNK1 MAP kinase interacting serine/threonine kinase 1 protein-coding Atac153_MAPQ30_peak_2340 chr15 100528223 100528223 + 4.57314 NA intron (NM_139057, intron 20 of 21) intron (NM_139057, intron 20 of 21) -181091 NR_003260 196968 Hs.567763 NM_194295 HPRD:13192 DNM1P46 C15orf51|DNM1DN14.2|DNM1DN14@ DNM1 pseudogene 46 pseudo Atac153_MAPQ30_peak_3167 chr18 76732966 76732966 + 4.57314 NA Intergenic Intergenic -7309 NM_171999 27164 Hs.700557 NM_171999 SALL3 ZNF796 spalt-like transcription factor 3 protein-coding Atac153_MAPQ30_peak_127 chr1 20963540 20963540 + 4.57314 NA intron (NM_032409, intron 1 of 7) intron (NM_032409, intron 1 of 7) 3368 NR_106732 102464833 NR_106732 MIR6084 hsa-mir-6084 microRNA 6084 ncRNA Atac153_MAPQ30_peak_3052 chr18 34865061 34865061 + 4.57314 NA intron (NM_001025089, intron 3 of 11) intron (NM_001025089, intron 3 of 11) 280939 NM_001025089 56853 Hs.435976 NM_020180 HPRD:12534 CELF4 BRUNOL-4|BRUNOL4 CUGBP, Elav-like family member 4 protein-coding Atac153_MAPQ30_peak_475 chr1 201593213 201593213 + 4.57314 NA Intergenic Intergenic -24237 NM_020443 89796 Hs.585374 NM_020443 HPRD:10113 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding Atac153_MAPQ30_peak_4960 chr4 1555506 1555506 + 4.57314 NA Intergenic Intergenic 130212 NM_001013622 152877 Hs.143314 NM_001013622 HPRD:12900 FAM53A DNTNP family with sequence similarity 53, member A protein-coding Atac153_MAPQ30_peak_2561 chr16 70794725 70794725 + 4.57314 NA intron (NR_034083, intron 2 of 5) intron (NR_034083, intron 2 of 5) 5762 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5337 chr5 75552000 75552000 + 4.57314 NA intron (NM_001297716, intron 4 of 12) intron (NM_001297716, intron 4 of 12) -147080 NM_006633 10788 Hs.291030 NM_006633 HPRD:09253 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding Atac153_MAPQ30_peak_4375 chr22 27774492 27774492 + 4.57314 NA Intergenic Intergenic 422994 NM_002430 4330 Hs.268515 NM_002430 HPRD:08862 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 meningioma (disrupted in balanced translocation) 1 protein-coding Atac153_MAPQ30_peak_3554 chr2 64650220 64650220 + 4.57314 NA Intergenic Intergenic -31107 NM_014181 29094 Hs.372208 NM_014181 HPRD:13708 LGALSL GRP lectin, galactoside-binding-like protein-coding Atac153_MAPQ30_peak_1696 chr12 124993975 124993975 + 4.57314 NA intron (NM_001077261, intron 2 of 47) MLT1K|LTR|ERVL-MaLR 58035 NM_006312 9612 Hs.137510 NM_006312 HPRD:02910 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding Atac153_MAPQ30_peak_3235 chr19 15215200 15215200 + 4.57314 NA Intergenic L2a|LINE|L2 -2975 NM_033025 85360 Hs.528701 NM_033025 HPRD:07830 SYDE1 7h3 synapse defective 1, Rho GTPase, homolog 1 (C. elegans) protein-coding Atac153_MAPQ30_peak_4564 chr3 11775539 11775539 + 4.57314 NA Intergenic MLT1J2|LTR|ERVL-MaLR -13297 NM_014667 9686 Hs.740389 NM_014667 HPRD:11672 VGLL4 VGL-4 vestigial-like family member 4 protein-coding Atac153_MAPQ30_peak_1407 chr11 133418887 133418887 + 4.57314 NA Intergenic Intergenic -16484 NM_001012393 4978 Hs.4817 NM_002545 HPRD:07198 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule-like protein-coding Atac153_MAPQ30_peak_1645 chr12 112591636 112591636 + 4.57314 NA TTS (NM_006700) TTS (NM_006700) 9489 NR_106921 102465519 NR_106921 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA Atac153_MAPQ30_peak_550 chr1 225066246 225066246 + 4.57314 NA Intergenic Intergenic -51110 NM_001145154 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein, axonemal, heavy chain 14 protein-coding Atac153_MAPQ30_peak_2970 chr17 79877978 79877978 + 4.57314 NA 3' UTR (NM_002359, exon 3 of 3) 3' UTR (NM_002359, exon 3 of 3) -1920 NM_016538 51547 Hs.514636 NM_016538 HPRD:12094 SIRT7 SIR2L7 sirtuin 7 protein-coding Atac153_MAPQ30_peak_3182 chr19 1520014 1520014 + 4.57314 NA Intergenic AluJr|SINE|Alu -4059 NM_001243079 126520 Hs.195352 NM_001011716 ENSG00000185988 PLK5 PLK-5|PLK5P|SgK384ps polo-like kinase 5 protein-coding Atac153_MAPQ30_peak_7081 chrX 68254784 68254784 + 4.57314 NA Intergenic Intergenic 130581 NM_145119 64219 Hs.522679 NM_022368 HPRD:02335 PJA1 PRAJA1|RNF70 praja ring finger 1, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_5646 chr6 34490274 34490274 + 4.57314 NA intron (NM_001199583, intron 1 of 9) MIR|SINE|MIR 7625 NM_001199583 29993 Hs.520087 NM_020804 HPRD:05936 PACSIN1 SDPI protein kinase C and casein kinase substrate in neurons 1 protein-coding Atac153_MAPQ30_peak_5652 chr6 35693861 35693861 + 4.57314 NA TTS (NR_027117) TTS (NR_027117) 2499 NM_001145775 2289 Hs.407190 NM_004117 HPRD:04019 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FK506 binding protein 5 protein-coding Atac153_MAPQ30_peak_2952 chr17 77128927 77128927 + 4.57314 NA intron (NM_001082575, intron 4 of 14) intron (NM_001082575, intron 4 of 14) 57908 NM_001042573 64772 Hs.29288 NM_022759 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding Atac153_MAPQ30_peak_6175 chr7 141135823 141135823 + 4.57314 NA intron (NM_001195278, intron 2 of 3) intron (NM_001195278, intron 2 of 3) -115255 NM_018238 55750 Hs.743318 NM_018238 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding Atac153_MAPQ30_peak_2369 chr16 5891072 5891072 + 4.57314 NA Intergenic Intergenic -178060 NM_001142333 54715 Hs.459842 NM_018723 HPRD:16091 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding Atac153_MAPQ30_peak_112 chr1 18593683 18593683 + 4.57314 NA intron (NM_032880, intron 2 of 9) intron (NM_032880, intron 2 of 9) 159443 NM_032880 84966 Hs.212511 NM_032880 HPRD:11309 IGSF21 - immunoglobin superfamily, member 21 protein-coding Atac153_MAPQ30_peak_3445 chr2 20339861 20339861 + 4.57314 NA Intergenic Intergenic 85066 NM_002997 6382 Hs.224607 NM_002997 HPRD:01718 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding Atac153_MAPQ30_peak_3628 chr2 97064005 97064005 + 4.57314 NA Intergenic MLT1A1-int|LTR|ERVL-MaLR 62526 NM_015341 23397 Hs.308045 NM_015341 HPRD:03820 NCAPH BRRN1|CAP-H non-SMC condensin I complex, subunit H protein-coding Atac153_MAPQ30_peak_5644 chr6 34080138 34080138 + 4.57314 NA intron (NM_001256809, intron 1 of 8) intron (NM_001256809, intron 1 of 8) -1598 NM_001256812 2914 Hs.429018 NM_000841 HPRD:04978 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate receptor, metabotropic 4 protein-coding Atac153_MAPQ30_peak_2024 chr14 91240749 91240749 + 4.57314 NA intron (NM_001010854, intron 3 of 19) intron (NM_001010854, intron 3 of 19) 42012 NM_001010854 145567 Hs.655697 NM_001010854 HPRD:18503 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding Atac153_MAPQ30_peak_5145 chr4 128454612 128454612 + 4.57314 NA Intergenic Intergenic -99475 NM_015693 27152 Hs.391481 NM_015693 INTU INT|PDZD6|PDZK6 inturned planar cell polarity protein protein-coding Atac153_MAPQ30_peak_3515 chr2 43185447 43185447 + 4.57314 NA Intergenic MIRb|SINE|MIR 81235 NR_110585 102723854 Hs.570165 NR_110585 LOC102723854 - uncharacterized LOC102723854 ncRNA Atac153_MAPQ30_peak_981 chr10 129127916 129127916 + 4.57314 NA intron (NM_001380, intron 29 of 51) intron (NM_001380, intron 29 of 51) -133494 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 FAM196A C10orf141 family with sequence similarity 196, member A protein-coding Atac153_MAPQ30_peak_3505 chr2 38622278 38622278 + 4.57314 NA Intergenic L1PA15|LINE|L1 -17846 NR_024191 64225 Hs.727652 NM_022374 HPRD:10662 ATL2 ARL3IP2|ARL6IP2|atlastin2 atlastin GTPase 2 protein-coding Atac153_MAPQ30_peak_5579 chr6 6599631 6599631 + 4.57314 NA intron (NM_004271, intron 1 of 4) intron (NM_004271, intron 1 of 4) 10697 NM_004271 9450 Hs.653138 NM_004271 LY86 MD-1|MMD-1|dJ80N2.1 lymphocyte antigen 86 protein-coding Atac153_MAPQ30_peak_224 chr1 42266328 42266328 + 4.57314 NA intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 118050 NM_024503 59269 Hs.403972 NM_024503 HPRD:09442 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding Atac153_MAPQ30_peak_5795 chr6 137355182 137355182 + 4.57314 NA intron (NM_014432, intron 1 of 6) intron (NM_014432, intron 1 of 6) 10267 NM_001278722 53832 Hs.445868 NM_014432 HPRD:05729 IL20RA CRF2-8|IL-20R-alpha|IL-20R1|IL-20RA interleukin 20 receptor, alpha protein-coding Atac153_MAPQ30_peak_1007 chr10 132284988 132284988 + 4.57314 NA Intergenic PABL_A|LTR|ERV1 350349 NM_001199868 10539 Hs.42644 NM_006541 HPRD:10153 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding Atac153_MAPQ30_peak_442 chr1 177840749 177840749 + 4.57314 NA Intergenic Intergenic 98301 NM_033127 89866 Hs.149540 NM_033127 HPRD:11491 SEC16B LZTR2|PGPR-p117|RGPR|SEC16S SEC16 homolog B (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5196 chr4 185017372 185017372 + 4.57314 NA intron (NM_153343, intron 7 of 7) intron (NM_153343, intron 7 of 7) 121742 NM_153343 133121 Hs.297814 NM_153343 HPRD:16863 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding Atac153_MAPQ30_peak_685 chr10 20403527 20403527 + 4.57314 NA intron (NM_001282736, intron 3 of 12) L2c|LINE|L2 298155 NM_032812 84898 Hs.99472 NM_032812 HPRD:08440 PLXDC2 TEM7R plexin domain containing 2 protein-coding Atac153_MAPQ30_peak_2030 chr14 93125442 93125442 + 4.57314 NA intron (NM_024832, intron 6 of 9) intron (NM_024832, intron 6 of 9) 89605 NM_001008530 5641 Hs.18069 NM_005606 HPRD:04017 LGMN AEP|LGMN1|PRSC1 legumain protein-coding Atac153_MAPQ30_peak_4594 chr3 16534381 16534381 + 4.57314 NA intron (NM_015150, intron 2 of 9) intron (NM_015150, intron 2 of 9) 20841 NM_015150 23180 Hs.98910 NM_015150 HPRD:17950 RFTN1 PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding Atac153_MAPQ30_peak_3876 chr2 220419596 220419596 + 4.57314 NA TTS (NM_001173431) TTS (NM_001173431) -5727 NR_036082 100423039 NR_036082 miRBase:MI0014152 MIR3132 - microRNA 3132 ncRNA Atac153_MAPQ30_peak_3700 chr2 121873015 121873015 + 4.57314 NA Intergenic L2a|LINE|L2 169763 NM_014553 29842 Hs.156471 NM_014553 HPRD:18175 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2-like 1 protein-coding Atac153_MAPQ30_peak_4044 chr20 24451124 24451124 + 4.57314 NA intron (NM_024893, intron 1 of 3) CpG 1289 NM_024893 79953 Hs.124638 NM_024893 HPRD:12766 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding Atac153_MAPQ30_peak_6345 chr8 38568578 38568578 + 4.57314 NA Intergenic Intergenic -17126 NM_001146216 6867 Hs.279245 NM_006283 HPRD:10391 TACC1 Ga55 transforming, acidic coiled-coil containing protein 1 protein-coding Atac153_MAPQ30_peak_3549 chr2 61995336 61995336 + 4.57314 NA Intergenic AluSq2|SINE|Alu 85942 NR_037710 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 family with sequence similarity 161, member A protein-coding Atac153_MAPQ30_peak_6722 chr9 99064189 99064189 + 4.57314 NA intron (NM_000197, intron 1 of 10) intron (NM_000197, intron 1 of 10) 245 NM_000197 3293 Hs.477 NM_000197 HPRD:05716 HSD17B3 EDH17B3|SDR12C2 hydroxysteroid (17-beta) dehydrogenase 3 protein-coding Atac153_MAPQ30_peak_196 chr1 36840479 36840479 + 4.57314 NA intron (NM_032017, intron 1 of 11) intron (NM_032017, intron 1 of 11) 11049 NM_001282547 83931 Hs.471768 NM_032017 HPRD:11359 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding Atac153_MAPQ30_peak_5049 chr4 24902008 24902008 + 4.57314 NA intron (NM_173463, intron 1 of 12) intron (NM_173463, intron 1 of 12) 12592 NM_001130726 91050 Hs.106432 NM_173463 HPRD:10908 CCDC149 - coiled-coil domain containing 149 protein-coding Atac153_MAPQ30_peak_5413 chr5 134608611 134608611 + 4.57314 NA intron (NM_001277348, intron 3 of 5) MIR|SINE|MIR -24744 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_16 chr1 2971359 2971359 + 4.57314 NA Intergenic L1MB4|LINE|L1 12930 NR_024371 440556 Hs.531041 NM_198543 ENSG00000177133 LINC00982 - long intergenic non-protein coding RNA 982 ncRNA Atac153_MAPQ30_peak_2715 chr17 13005022 13005022 + 4.57314 NA Intergenic MER34C|LTR|ERV1 -83641 NM_001165962 60528 Hs.434232 NM_018127 HPRD:05641 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding Atac153_MAPQ30_peak_1392 chr11 130393701 130393701 + 4.57314 NA Intergenic Intergenic 74832 NM_139055 170689 Hs.534221 NM_139055 HPRD:06330 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif, 15 protein-coding Atac153_MAPQ30_peak_5040 chr4 20821358 20821358 + 4.57314 NA intron (NM_147183, intron 2 of 7) MLT1A1|LTR|ERVL-MaLR 30933 NM_147181 80333 Hs.655705 NM_025221 HPRD:12184 KCNIP4 CALP|KCHIP4 Kv channel interacting protein 4 protein-coding Atac153_MAPQ30_peak_265 chr1 54039323 54039323 + 4.57314 NA intron (NM_147193, intron 3 of 9) (CA)n|Simple_repeat|Simple_repeat 114251 NM_033067 63948 Hs.131654 NM_033067 HPRD:16828 DMRTB1 - DMRT-like family B with proline-rich C-terminal, 1 protein-coding Atac153_MAPQ30_peak_6442 chr8 102189112 102189112 + 4.57314 NA Intergenic Intergenic 28848 NM_001267708 51123 Hs.374485 NM_016096 HPRD:13688 ZNF706 PNAS-106|PNAS-113 zinc finger protein 706 protein-coding Atac153_MAPQ30_peak_6591 chr9 16254715 16254715 + 4.57314 NA intron (NR_073471, intron 1 of 3) intron (NR_073471, intron 1 of 3) -1610 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding Atac153_MAPQ30_peak_2840 chr17 43504768 43504768 + 4.57314 NA intron (NM_001282290, intron 1 of 16) L2c|LINE|L2 -1756 NM_199282 201176 Hs.205326 NM_174919 HPRD:12477 ARHGAP27 CAMGAP1|PP905|SH3D20|SH3P20 Rho GTPase activating protein 27 protein-coding Atac153_MAPQ30_peak_3686 chr2 120002605 120002605 + 4.57314 NA intron (NM_018234, intron 2 of 5) intron (NM_018234, intron 2 of 5) 21221 NM_018234 55240 Hs.647822 NM_018234 HPRD:10285 STEAP3 AHMIO2|STMP3|TSAP6|dudlin-2 STEAP family member 3, metalloreductase protein-coding Atac153_MAPQ30_peak_5412 chr5 134382812 134382812 + 4.57314 NA intron (NM_001277348, intron 1 of 5) intron (NM_001277348, intron 1 of 5) -7075 NR_105050 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 CTC-276P9.1 C5orf66 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3303 chr19 41243111 41243111 + 4.57314 NA intron (NM_025194, intron 5 of 6) MLT1H|LTR|ERVL-MaLR 12717 NM_198476 284325 Hs.585105 NM_198476 HPRD:13449 C19orf54 - chromosome 19 open reading frame 54 protein-coding Atac153_MAPQ30_peak_5725 chr6 84767926 84767926 + 4.57314 NA intron (NM_138409, intron 2 of 3) L2a|LINE|L2 24506 NM_138409 112609 Hs.370055 NM_138409 HPRD:12843 MRAP2 BMIQ18|C6orf117|bA51G5.2 melanocortin 2 receptor accessory protein 2 protein-coding Atac153_MAPQ30_peak_2240 chr15 74235743 74235743 + 4.57314 NA intron (NM_005576, intron 2 of 6) intron (NM_005576, intron 2 of 6) -15154 NR_040068 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 - LOXL1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3078 chr18 44240727 44240727 + 4.57314 NA Intergenic Intergenic -3731 NM_144612 125336 Hs.345877 NM_144612 HPRD:08316 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding Atac153_MAPQ30_peak_1191 chr11 57191895 57191895 + 4.57314 NA intron (NM_001278206, intron 4 of 13) MIR3|SINE|MIR 2665 NM_014096 29015 Hs.99962 NM_014096 HPRD:15391 SLC43A3 EEG1|FOAP-13|PRO1659|SEEEG-1 solute carrier family 43, member 3 protein-coding Atac153_MAPQ30_peak_1382 chr11 128293360 128293360 + 4.57314 NA Intergenic MIRc|SINE|MIR 98845 NM_005238 2113 Hs.369438 NM_005238 HPRD:01260 ETS1 ETS-1|EWSR2|p54 v-ets avian erythroblastosis virus E26 oncogene homolog 1 protein-coding Atac153_MAPQ30_peak_5548 chr5 180500239 180500239 + 4.57314 NA Intergenic Intergenic -29755 NR_107056 102465882 NR_107056 MIR8089 hsa-mir-8089 microRNA 8089 ncRNA Atac153_MAPQ30_peak_5326 chr5 71155492 71155492 + 4.57314 NA Intergenic Intergenic 140502 NM_004291 9607 Hs.1707 NM_004291 HPRD:04006 CARTPT CART CART prepropeptide protein-coding Atac153_MAPQ30_peak_2774 chr17 25560888 25560888 + 4.57314 NA Intergenic Intergenic 60134 NR_039748 100616277 NR_039748 miRBase:MI0016889 MIR4522 - microRNA 4522 ncRNA Atac153_MAPQ30_peak_6080 chr7 97692440 97692440 + 4.57314 NA Intergenic Intergenic -43757 NM_014916 22853 Hs.444179 NM_014916 HPRD:13994 LMTK2 AATYK2|BREK|KPI-2|KPI2|LMR2|PPP1R100|cprk lemur tyrosine kinase 2 protein-coding Atac153_MAPQ30_peak_5707 chr6 53309002 53309002 + 4.57314 NA Intergenic Intergenic -95025 NM_001242828 60481 Hs.520189 NM_021814 HPRD:13268 ELOVL5 HELO1|SCA38|dJ483K16.1 ELOVL fatty acid elongase 5 protein-coding Atac153_MAPQ30_peak_1248 chr11 70424341 70424341 + 4.57314 NA intron (NR_110766, intron 2 of 8) intron (NR_110766, intron 2 of 8) -52858 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6796 chr9 125043134 125043134 + 4.57314 NA intron (NM_199177, intron 2 of 4) L2a|LINE|L2 9991 NM_199177 92399 Hs.368011 NM_138777 HPRD:06856 MRRF MRFF|MTRRF|RRF mitochondrial ribosome recycling factor protein-coding Atac153_MAPQ30_peak_5703 chr6 52369653 52369653 + 4.57314 NA intron (NM_012288, intron 9 of 10) intron (NM_012288, intron 9 of 10) 72209 NM_012288 9697 Hs.520182 NM_012288 HPRD:16338 TRAM2 - translocation associated membrane protein 2 protein-coding Atac153_MAPQ30_peak_1442 chr12 4400451 4400451 + 4.57314 NA intron (NM_001759, intron 4 of 4) intron (NM_001759, intron 4 of 4) -15101 NR_125790 103752584 Hs.577711 NR_125790 CCND2-AS1 - CCND2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2254 chr15 75889428 75889428 + 4.57314 NA TTS (NM_005701) TTS (NM_005701) -17796 NM_002833 5780 Hs.445775 NM_002833 HPRD:02864 PTPN9 MEG2|PTPMEG2 protein tyrosine phosphatase, non-receptor type 9 protein-coding Atac153_MAPQ30_peak_7139 chrX 102985541 102985541 + 4.57314 NA Intergenic L2c|LINE|L2 -1989 NM_001172285 441509 Hs.533289 NM_001024452 ENSG00000188828 GLRA4 - glycine receptor, alpha 4 protein-coding Atac153_MAPQ30_peak_4265 chr21 37555207 37555207 + 4.57314 NA intron (NM_005128, intron 2 of 36) intron (NM_005128, intron 2 of 36) 18368 NM_005128 9980 Hs.204575 NM_005128 HPRD:07271 DOPEY2 21orf5|C21orf5 dopey family member 2 protein-coding Atac153_MAPQ30_peak_389 chr1 156356745 156356745 + 4.57314 NA Intergenic AluJo|SINE|Alu 17765 NR_046115 57127 Hs.131835 NM_020407 HPRD:06152 RHBG SLC42A2 Rh family, B glycoprotein (gene/pseudogene) protein-coding Atac153_MAPQ30_peak_6491 chr8 131859976 131859976 + 4.57314 NA intron (NM_001115, intron 10 of 17) intron (NM_001115, intron 10 of 17) 192859 NM_001115 114 Hs.591859 NM_001115 HPRD:00051 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 (brain) protein-coding Atac153_MAPQ30_peak_2835 chr17 42300602 42300602 + 4.57314 NA Intergenic AluJo|SINE|Alu -1608 NR_045058 7343 Hs.89781 NM_014233 HPRD:02814 UBTF NOR-90|UBF|UBF-1|UBF1|UBF2 upstream binding transcription factor, RNA polymerase I protein-coding Atac153_MAPQ30_peak_1003 chr10 131719991 131719991 + 4.57314 NA intron (NM_001005463, intron 6 of 15) intron (NM_001005463, intron 6 of 15) 42100 NM_001005463 253738 Hs.591374 NM_001005463 HPRD:16818 EBF3 COE3|EBF-3|O/E-2|OE-2 early B-cell factor 3 protein-coding Atac153_MAPQ30_peak_713 chr10 35480902 35480902 + 4.57314 NA intron (NM_181571, intron 6 of 7) intron (NM_181571, intron 6 of 7) -3153 NM_001267568 1390 Hs.200250 NM_001881 HPRD:00444 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding Atac153_MAPQ30_peak_1221 chr11 64713892 64713892 + 4.57314 NA intron (NM_001300803, intron 5 of 8) intron (NM_001300803, intron 5 of 8) -10532 NM_130769 170589 Hs.436119 NM_130769 HPRD:17052 GPHA2 A2|GPA2|ZSIG51 glycoprotein hormone alpha 2 protein-coding Atac153_MAPQ30_peak_5708 chr6 53510679 53510679 + 4.57314 NA Intergenic L2a|LINE|L2 19827 NM_001003760 401265 Hs.131064 NM_001003760 HPRD:13923 KLHL31 BKLHD6|KBTBD1|KLHL|bA345L23.2 kelch-like family member 31 protein-coding Atac153_MAPQ30_peak_1934 chr14 58394906 58394906 + 4.57314 NA Intergenic L1MDa|LINE|L1 -62314 NM_001206920 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35, member F4 protein-coding Atac153_MAPQ30_peak_2814 chr17 38338487 38338487 + 4.57314 NA intron (NM_016339, intron 2 of 14) MIRc|SINE|MIR 4245 NM_016339 51195 Hs.632254 NM_016339 HPRD:17954 RAPGEFL1 Link-GEFII Rap guanine nucleotide exchange factor (GEF)-like 1 protein-coding Atac153_MAPQ30_peak_3857 chr2 217108532 217108532 + 4.57314 NA Intergenic LTR16B|LTR|ERVL 26920 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 PKI55 - DKFZp434H1419 ncRNA Atac153_MAPQ30_peak_568 chr1 229114737 229114737 + 4.57314 NA Intergenic Intergenic 243913 NM_021205 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding Atac153_MAPQ30_peak_6049 chr7 68467178 68467178 + 4.57314 NA Intergenic MER21C|LTR|ERVL 595303 NR_108105 100507468 Hs.362492 NR_108105 LOC100507468 - uncharacterized LOC100507468 ncRNA Atac153_MAPQ30_peak_2207 chr15 67257757 67257757 + 4.57314 NA Intergenic L2b|LINE|L2 -100438 NM_005902 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Atac153_MAPQ30_peak_393 chr1 156785305 156785305 + 4.57314 NA promoter-TSS (NM_001007792) promoter-TSS (NM_001007792) -237 NM_001007792 4914 Hs.406293 NM_002529 HPRD:01869 NTRK1 MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA neurotrophic tyrosine kinase, receptor, type 1 protein-coding Atac153_MAPQ30_peak_6766 chr9 117039288 117039288 + 4.57314 NA intron (NM_032888, intron 37 of 60) MIRb|SINE|MIR -46015 NM_000607 5004 Hs.522356 NM_000607 HPRD:00724 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding Atac153_MAPQ30_peak_1021 chr10 133857135 133857135 + 4.57314 NA Intergenic Intergenic -61178 NM_001105521 282973 Hs.106254 NM_194303 HPRD:12574 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding Atac153_MAPQ30_peak_3913 chr2 235176428 235176428 + 4.57314 NA Intergenic Intergenic 217082 NM_006944 6694 Hs.444488 NM_006944 HPRD:04029 SPP2 SPP-24|SPP24 secreted phosphoprotein 2, 24kDa protein-coding Atac153_MAPQ30_peak_1740 chr12 132096876 132096876 + 4.57314 NA Intergenic Intergenic -98756 NM_004592 6433 Hs.308171 NM_004592 HPRD:09055 SFSWAP SFRS8|SWAP splicing factor, suppressor of white-apricot family protein-coding Atac153_MAPQ30_peak_6381 chr8 55122312 55122312 + 4.57314 NA Intergenic Intergenic 74531 NM_014175 29088 Hs.18349 NM_014175 MRPL15 L15mt|MRP-L15|MRP-L7|RPML7 mitochondrial ribosomal protein L15 protein-coding Atac153_MAPQ30_peak_3299 chr19 40886283 40886283 + 4.57314 NA exon (NM_144685, exon 3 of 4) exon (NM_144685, exon 3 of 4) 9811 NM_144685 147746 Hs.79363 NM_144685 HPRD:13652 HIPK4 - homeodomain interacting protein kinase 4 protein-coding Atac153_MAPQ30_peak_5801 chr6 143461861 143461861 + 4.57314 NA intron (NM_001286587, intron 3 of 6) intron (NM_001286587, intron 3 of 6) 79882 NM_016108 51390 Hs.567501 NM_016108 HPRD:16346 AIG1 AIG-1|dJ95L4.1 androgen-induced 1 protein-coding Atac153_MAPQ30_peak_3546 chr2 60615681 60615681 + 4.57314 NA Intergenic Intergenic -1101 NR_039631 100616473 NR_039631 miRBase:MI0016772 MIR4432 - microRNA 4432 ncRNA Atac153_MAPQ30_peak_3793 chr2 173095801 173095801 + 4.57314 NA Intergenic Intergenic -128323 NM_004405 1746 Hs.419 NM_004405 HPRD:00527 DLX2 TES-1|TES1 distal-less homeobox 2 protein-coding Atac153_MAPQ30_peak_2197 chr15 65486963 65486963 + 4.57314 NA Intergenic Intergenic -9400 NM_006660 10845 Hs.113823 NM_006660 CLPX - caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding Atac153_MAPQ30_peak_4610 chr3 32207418 32207418 + 4.57314 NA 3' UTR (NM_015141, exon 8 of 8) 3' UTR (NM_015141, exon 8 of 8) 59415 NM_015141 23171 Hs.82432 NM_015141 HPRD:10008 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1-like protein-coding Atac153_MAPQ30_peak_5562 chr6 3523652 3523652 + 4.57314 NA Intergenic Intergenic -66859 NM_015482 63027 Hs.713588 NM_015482 HPRD:12904 SLC22A23 C6orf85 solute carrier family 22, member 23 protein-coding Atac153_MAPQ30_peak_2808 chr17 35276675 35276675 + 4.57314 NA Intergenic Intergenic -18097 NM_005568 3975 Hs.443727 NM_005568 HPRD:09067 LHX1 LIM-1|LIM1 LIM homeobox 1 protein-coding Atac153_MAPQ30_peak_580 chr1 230650385 230650385 + 4.57314 NA Intergenic MSTC|LTR|ERVL-MaLR -88711 NM_001258311 79605 Hs.520463 NM_024554 HPRD:10148 PGBD5 - piggyBac transposable element derived 5 protein-coding Atac153_MAPQ30_peak_2001 chr14 77706283 77706283 + 4.57314 NA intron (NM_020431, intron 12 of 23) intron (NM_020431, intron 12 of 23) -26278 NR_031661 100302236 NR_031661 miRBase:MI0006394 MIR1260A MIR1260|MIRN1260|hsa-mir-1260|hsa-mir-1260a microRNA 1260a ncRNA Atac153_MAPQ30_peak_2339 chr15 100031085 100031085 + 4.57314 NA Intergenic L1MEg|LINE|L1 -75048 NM_005587 4205 Hs.268675 NM_005587 HPRD:02807 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding Atac153_MAPQ30_peak_6358 chr8 41517354 41517354 + 4.57314 NA promoter-TSS (NR_106984) promoter-TSS (NR_106984) -608 NR_106984 102465696 NR_106984 MIR486-2 hsa-mir-486-2 microRNA 486-2 ncRNA Atac153_MAPQ30_peak_3464 chr2 27098807 27098807 + 4.57314 NA intron (NM_001253724, intron 1 of 12) intron (NM_001253724, intron 1 of 12) 27515 NM_001253724 56896 Hs.299315 NM_020134 HPRD:10522 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase-like 5 protein-coding Atac153_MAPQ30_peak_1474 chr12 26276227 26276227 + 4.57314 NA intron (NM_030762, intron 4 of 4) intron (NM_030762, intron 4 of 4) 1776 NM_030762 79365 Hs.177841 NM_030762 HPRD:16204 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family, member e41 protein-coding Atac153_MAPQ30_peak_2062 chr14 100407059 100407059 + 4.57314 NA 3' UTR (NM_004434, exon 22 of 22) 3' UTR (NM_004434, exon 22 of 22) -124692 NM_016337 51466 Hs.125867 NM_016337 HPRD:10942 EVL RNB6 Enah/Vasp-like protein-coding Atac153_MAPQ30_peak_4804 chr3 121950058 121950058 + 4.57314 NA intron (NM_001178065, intron 1 of 6) intron (NM_001178065, intron 1 of 6) 46877 NM_001178065 846 Hs.435615 NM_000388 HPRD:03122 CASR CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1 calcium-sensing receptor protein-coding Atac153_MAPQ30_peak_1217 chr11 64298904 64298904 + 4.57314 NA Intergenic L2b|LINE|L2 -24194 NM_018484 55867 Hs.220844 NM_018484 HPRD:06161 SLC22A11 OAT4|hOAT4 solute carrier family 22 (organic anion/urate transporter), member 11 protein-coding Atac153_MAPQ30_peak_4977 chr4 3634086 3634086 + 4.57314 NA Intergenic Intergenic 45496 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LOC100133461 - uncharacterized LOC100133461 ncRNA Atac153_MAPQ30_peak_2935 chr17 74539859 74539859 + 4.57314 NA intron (NM_001077620, intron 4 of 4) intron (NM_001077620, intron 4 of 4) 3738 NM_001077620 768206 Hs.634380 NM_001077620 PRCD RP36 progressive rod-cone degeneration protein-coding Atac153_MAPQ30_peak_2689 chr17 7722706 7722706 + 4.57314 NA exon (NM_020877, exon 71 of 85) exon (NM_020877, exon 71 of 85) -20529 NM_001080424 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine (K)-specific demethylase 6B protein-coding Atac153_MAPQ30_peak_2914 chr17 70392263 70392263 + 4.57314 NA Intergenic MLT1J2|LTR|ERVL-MaLR 196680 NR_036488 100499467 Hs.157726 NR_036488 LINC00673 LINC00511 long intergenic non-protein coding RNA 673 ncRNA Atac153_MAPQ30_peak_6053 chr7 70294161 70294161 + 4.57314 NA Intergenic Intergenic -303362 NM_022479 64409 Hs.488591 NM_022479 HPRD:15655 WBSCR17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T5L Williams-Beuren syndrome chromosome region 17 protein-coding Atac153_MAPQ30_peak_4007 chr20 17044291 17044291 + 4.57314 NA Intergenic LTR16E1|LTR|ERVL -162461 NM_001201528 5126 Hs.315186 NM_002594 HPRD:01202 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding Atac153_MAPQ30_peak_3866 chr2 217692161 217692161 + 4.57314 NA Intergenic Intergenic 32621 NM_003284 7141 Hs.3017 NM_003284 HPRD:01830 TNP1 TP1 transition protein 1 (during histone to protamine replacement) protein-coding Atac153_MAPQ30_peak_6531 chr8 141135370 141135370 + 4.57314 NA intron (NM_031466, intron 17 of 22) intron (NM_031466, intron 17 of 22) 332491 NM_001160372 83696 Hs.654911 NM_031466 HPRD:18136 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|TRS120 trafficking protein particle complex 9 protein-coding Atac153_MAPQ30_peak_6254 chr8 2363470 2363470 + 4.57314 NA Intergenic Intergenic 116983 NR_125423 101927815 Hs.571467 NR_125423 ENSG00000249694 LOC101927815 - uncharacterized LOC101927815 ncRNA Atac153_MAPQ30_peak_5508 chr5 174252976 174252976 + 4.57314 NA Intergenic MLT1K|LTR|ERVL-MaLR 74239 NR_039777 100616202 NR_039777 miRBase:MI0017261 MIR4634 - microRNA 4634 ncRNA Atac153_MAPQ30_peak_3568 chr2 70626423 70626423 + 4.57314 NA Intergenic Intergenic 82349 NR_046798 100874273 Hs.682157 NR_046798 TGFA-IT1 - TGFA intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_2417 chr16 16192684 16192684 + 4.57314 NA intron (NM_004996, intron 19 of 30) intron (NM_004996, intron 19 of 30) 124644 NM_001171 368 Hs.442182 NM_001171 HPRD:04453 ABCC6 ABC34|ARA|EST349056|GACI2|MLP1|MOAT-E|MOATE|MRP6|PXE|PXE1|URG7 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 protein-coding Atac153_MAPQ30_peak_1714 chr12 128382951 128382951 + 4.57314 NA non-coding (NR_033987, exon 3 of 3) non-coding (NR_033987, exon 3 of 3) 16789 NR_033987 400087 Hs.524846 NR_033987 FLJ37505 - uncharacterized LOC400087 ncRNA Atac153_MAPQ30_peak_1031 chr10 134954264 134954264 + 4.57314 NA Intergenic Intergenic -19707 NM_152643 85442 Hs.530685 NM_152643 HPRD:13931 KNDC1 C10orf23|RASGEF2|bB439H18.3 kinase non-catalytic C-lobe domain (KIND) containing 1 protein-coding Atac153_MAPQ30_peak_3204 chr19 5914630 5914630 + 4.57314 NA exon (NM_080590, exon 3 of 5) exon (NM_080590, exon 3 of 5) 437 NM_080590 828 Hs.584744 NM_004058 CAPS CAPS1 calcyphosine protein-coding Atac153_MAPQ30_peak_1341 chr11 117427520 117427520 + 4.57314 NA intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 228949 NM_014956 22897 Hs.504009 NM_014956 HPRD:10854 CEP164 NPHP15 centrosomal protein 164kDa protein-coding Atac153_MAPQ30_peak_3330 chr19 48178312 48178312 + 4.57314 NA intron (NM_015711, intron 4 of 14) L2a|LINE|L2 -38289 NM_014601 30846 Hs.744963 NM_014601 HPRD:10434 EHD2 PAST2 EH-domain containing 2 protein-coding Atac153_MAPQ30_peak_4418 chr22 35204030 35204030 + 4.57314 NA Intergenic Intergenic -258100 NM_001008494 91464 Hs.567637 NM_001008494 HPRD:17957 ISX Pix-1|RAXLX intestine-specific homeobox protein-coding Atac153_MAPQ30_peak_1503 chr12 47884183 47884183 + 4.57314 NA Intergenic Intergenic 215661 NM_001146075 79657 Hs.437855 NM_024604 RPAP3 - RNA polymerase II associated protein 3 protein-coding Atac153_MAPQ30_peak_4112 chr20 42122641 42122641 + 4.57314 NA Intergenic Intergenic -13679 NM_032107 26013 Hs.709356 NM_015478 HPRD:16387 L3MBTL1 H-L(3)MBT|L3MBTL|ZC2HC3|dJ138B7.3 l(3)mbt-like 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_4173 chr20 55496866 55496866 + 4.57314 NA Intergenic MIR|SINE|MIR -291886 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1235 chr11 68720056 68720056 + 4.57314 NA Intergenic L1MB7|LINE|L1 28399 NM_198923 116512 Hs.527802 NM_198923 HPRD:06250 MRGPRD MRGD|TGR7 MAS-related GPR, member D protein-coding Atac153_MAPQ30_peak_5078 chr4 53800365 53800365 + 4.57314 NA intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 71870 NM_023940 65997 Hs.8035 NM_023940 HPRD:15216 RASL11B - RAS-like, family 11, member B protein-coding Atac153_MAPQ30_peak_170 chr1 31159637 31159637 + 4.57314 NA Intergenic Intergenic -31982 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2793 chr17 31741274 31741274 + 4.57314 NA intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 119505 NR_037584 100506677 Hs.652571 NR_037584 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo Atac153_MAPQ30_peak_2755 chr17 21199902 21199902 + 4.57314 NA intron (NM_002756, intron 1 of 11) MIRb|SINE|MIR 8554 NM_002756 5606 Hs.514012 NM_002756 HPRD:03816 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding Atac153_MAPQ30_peak_5556 chr6 2110118 2110118 + 4.57314 NA intron (NM_001500, intron 4 of 10) intron (NM_001500, intron 4 of 10) 66107 NM_001253846 2762 Hs.144496 NM_001500 HPRD:11925 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding Atac153_MAPQ30_peak_4123 chr20 44166547 44166547 + 4.57314 NA intron (NM_001198986, intron 4 of 4) intron (NM_001198986, intron 4 of 4) 1587 NM_080827 140870 Hs.673237 NM_080827 HPRD:15677 WFDC6 C20orf171|WAP6|dJ461P17.11 WAP four-disulfide core domain 6 protein-coding Atac153_MAPQ30_peak_414 chr1 162115667 162115667 + 4.57314 NA intron (NM_001164757, intron 1 of 9) intron (NM_001164757, intron 1 of 9) -11230 NR_039798 100616386 NR_039798 MIR4654 - microRNA 4654 ncRNA Atac153_MAPQ30_peak_6416 chr8 94548603 94548603 + 4.57314 NA intron (NR_033858, intron 6 of 10) MER21B|LTR|ERVL 164058 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA Atac153_MAPQ30_peak_3056 chr18 35072928 35072928 + 4.57314 NA intron (NM_001025087, intron 1 of 12) intron (NM_001025087, intron 1 of 12) 73072 NM_001025089 56853 Hs.435976 NM_020180 HPRD:12534 CELF4 BRUNOL-4|BRUNOL4 CUGBP, Elav-like family member 4 protein-coding Atac153_MAPQ30_peak_4602 chr3 27059079 27059079 + 4.57314 NA Intergenic Intergenic 351833 NM_199347 152110 Hs.506115 NM_152534 HPRD:08135 NEK10 - NIMA-related kinase 10 protein-coding Atac153_MAPQ30_peak_6521 chr8 139551920 139551920 + 4.57314 NA Intergenic Intergenic -42855 NM_015912 51059 Hs.126024 NM_015912 HPRD:14230 FAM135B C8ORFK32 family with sequence similarity 135, member B protein-coding Atac153_MAPQ30_peak_1190 chr11 48204747 48204747 + 4.57314 NA Intergenic Intergenic -33615 NM_001005470 119765 Hs.553566 NM_001005470 HPRD:14960 OR4B1 OR11-106|OST208 olfactory receptor, family 4, subfamily B, member 1 protein-coding Atac153_MAPQ30_peak_6125 chr7 128312801 128312801 + 4.57314 NA intron (NM_001128926, intron 1 of 4) intron (NM_001128926, intron 1 of 4) 463 NM_001290254 346653 Hs.445236 NM_001012454 HPRD:17840 FAM71F2 FAM137B family with sequence similarity 71, member F2 protein-coding Atac153_MAPQ30_peak_6507 chr8 136346246 136346246 + 4.57314 NA Intergenic MIRb|SINE|MIR 99872 NR_120396 286094 Hs.440978 NR_026706 ENSG00000254083 LOC286094 - uncharacterized LOC286094 ncRNA Atac153_MAPQ30_peak_5227 chr5 3348545 3348545 + 4.57314 NA Intergenic Intergenic 155573 NR_104618 102467075 Hs.652949 NR_104618 LINC01017 - long intergenic non-protein coding RNA 1017 ncRNA Atac153_MAPQ30_peak_4316 chr21 45573980 45573980 + 4.57314 NA Intergenic L1MB3|LINE|L1 20486 NM_004649 8209 Hs.413482 NM_004649 HPRD:09044 C21orf33 ES1|GT335|HES1|KNPH|KNPI chromosome 21 open reading frame 33 protein-coding Atac153_MAPQ30_peak_3274 chr19 31779917 31779917 + 4.57314 NA intron (NM_020856, intron 1 of 1) MIR3|SINE|MIR 60273 NM_020856 57616 Hs.278436 NM_020856 HPRD:18351 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding Atac153_MAPQ30_peak_5538 chr5 178488588 178488588 + 4.57314 NA intron (NM_014594, intron 1 of 4) MER74A|LTR|ERVL 981 NM_014594 30832 Hs.272328 NM_014594 HPRD:15785 ZNF354C KID3 zinc finger protein 354C protein-coding Atac153_MAPQ30_peak_686 chr10 20587362 20587362 + 4.57314 NA Intergenic Intergenic -253537 NR_039822 100616383 NR_039822 miRBase:MI0017306 MIR4675 - microRNA 4675 ncRNA Atac153_MAPQ30_peak_4254 chr21 35504247 35504247 + 4.57314 NA intron (NM_032476, intron 2 of 2) intron (NM_032476, intron 2 of 2) -48731 NR_027267 114036 Hs.720230 NM_153751 ENSG00000227456 LINC00310 C21orf82|NCRNA00310 long intergenic non-protein coding RNA 310 ncRNA Atac153_MAPQ30_peak_1473 chr12 26116908 26116908 + 4.57314 NA intron (NM_001164748, intron 1 of 4) intron (NM_001164748, intron 1 of 4) -4533 NR_038228 100506451 Hs.560092 NR_038227 RASSF8-AS1 - RASSF8 atnisense RNA 1 ncRNA Atac153_MAPQ30_peak_7190 chrX 122372140 122372140 + 4.57314 NA intron (NM_007325, intron 2 of 15) intron (NM_007325, intron 2 of 15) 54044 NM_001256743 2892 Hs.377070 NM_000828 HPRD:02378 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate receptor, ionotropic, AMPA 3 protein-coding Atac153_MAPQ30_peak_1006 chr10 132270749 132270749 + 4.57314 NA Intergenic L1MC3|LINE|L1 336110 NM_001199868 10539 Hs.42644 NM_006541 HPRD:10153 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding Atac153_MAPQ30_peak_4278 chr21 39804409 39804409 + 4.57314 NA intron (NM_001243429, intron 2 of 8) intron (NM_001243429, intron 2 of 8) 66019 NM_001136155 2078 Hs.473819 NM_004449 HPRD:01298 ERG erg-3|p55 v-ets avian erythroblastosis virus E26 oncogene homolog protein-coding Atac153_MAPQ30_peak_6923 chrX 17600712 17600712 + 4.57314 NA intron (NM_001291867, intron 1 of 8) intron (NM_001291867, intron 1 of 8) -23464 NR_046632 100873920 Hs.584577 NR_046632 NHS-AS1 - NHS antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1188 chr11 48117822 48117822 + 4.57314 NA intron (NM_002843, intron 1 of 24) intron (NM_002843, intron 1 of 24) 115712 NM_002843 5795 Hs.318547 NM_002843 HPRD:02955 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase, receptor type, J protein-coding Atac153_MAPQ30_peak_681 chr10 17647173 17647173 + 4.57314 NA intron (NM_014241, intron 1 of 6) L1MB3|LINE|L1 12200 NM_014241 9200 Hs.114062 NM_014241 HPRD:10175 PTPLA CAP|HACD1 protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A protein-coding Atac153_MAPQ30_peak_5219 chr5 2397898 2397898 + 4.57314 NA Intergenic Intergenic -85583 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA Atac153_MAPQ30_peak_3647 chr2 103806202 103806202 + 4.57314 NA Intergenic L1PA13|LINE|L1 427712 NM_144632 130827 Hs.436203 NM_144632 HPRD:08698 TMEM182 - transmembrane protein 182 protein-coding Atac153_MAPQ30_peak_6162 chr7 137439929 137439929 + 4.57314 NA intron (NM_004717, intron 1 of 33) intron (NM_004717, intron 1 of 33) 91680 NM_004717 9162 Hs.242947 NM_004717 HPRD:07238 DGKI DGK-IOTA diacylglycerol kinase, iota protein-coding Atac153_MAPQ30_peak_1020 chr10 133472241 133472241 + 4.57314 NA Intergenic L1PA15-16|LINE|L1 150294 NR_038365 399827 Hs.523353 NM_001001677 HPRD:13530 LINC01164 - long intergenic non-protein coding RNA 1164 ncRNA Atac153_MAPQ30_peak_7054 chrX 58281300 58281300 + 4.57314 NA Intergenic GSATX|Satellite|centr -344233 NM_007156 7789 Hs.550094 NM_007156 HPRD:02210 ZXDA ZNF896 zinc finger, X-linked, duplicated A protein-coding Atac153_MAPQ30_peak_1112 chr11 17778896 17778896 + 4.57314 NA intron (NM_004976, intron 1 of 1) L3|LINE|CR1 21401 NM_004976 3746 Hs.552896 NM_004976 HPRD:15936 KCNC1 KV3.1|KV4|NGK2 potassium voltage-gated channel, Shaw-related subfamily, member 1 protein-coding Atac153_MAPQ30_peak_6868 chr9 140104124 140104124 + 4.57314 NA intron (NM_014434, intron 2 of 13) intron (NM_014434, intron 2 of 13) 4005 NM_014434 27158 Hs.512564 NM_014434 HPRD:10444 NDOR1 NR1|bA350O14.9 NADPH dependent diflavin oxidoreductase 1 protein-coding Atac153_MAPQ30_peak_722 chr10 42972851 42972851 + 4.57314 NA non-coding (NR_026827, exon 2 of 5) non-coding (NR_026827, exon 2 of 5) 1912 NR_026827 84856 Hs.55977 NM_032770 HPRD:17516 LINC00839 - long intergenic non-protein coding RNA 839 ncRNA Atac153_MAPQ30_peak_2072 chr14 101334586 101334586 + 4.57314 NA promoter-TSS (NR_030172) promoter-TSS (NR_030172) -811 NR_030172 574450 NR_030172 miRBase:MI0003132 MIR493 MIRN493|hsa-mir-493 microRNA 493 ncRNA Atac153_MAPQ30_peak_3301 chr19 41043557 41043557 + 4.57314 NA intron (NM_020971, intron 20 of 35) MIR|SINE|MIR 7162 NM_025213 57731 Hs.32706 NM_020971 HPRD:09372 SPTBN4 QV|SPNB4|SPTBN3 spectrin, beta, non-erythrocytic 4 protein-coding Atac153_MAPQ30_peak_3503 chr2 38103425 38103425 + 4.57314 NA promoter-TSS (NR_110012) promoter-TSS (NR_110012) -419 NR_110012 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA Atac153_MAPQ30_peak_6065 chr7 75988927 75988927 + 4.57314 NA promoter-TSS (NM_012479) promoter-TSS (NM_012479) -585 NM_012479 7532 Hs.744840 NM_012479 HPRD:05639 YWHAG 14-3-3GAMMA|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma protein-coding Atac153_MAPQ30_peak_3253 chr19 22318217 22318217 + 4.57314 NA Intergenic Intergenic 61536 NM_001001411 163223 Hs.55452 NM_001001411 HPRD:17313 ZNF676 - zinc finger protein 676 protein-coding Atac153_MAPQ30_peak_4621 chr3 36882806 36882806 + 4.57314 NA intron (NM_014831, intron 17 of 22) intron (NM_014831, intron 17 of 22) -101454 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin-like kinase 3 protein-coding Atac153_MAPQ30_peak_818 chr10 80062331 80062331 + 4.57314 NA Intergenic Intergenic 35246 NR_073447 414243 Hs.55047 NR_073447 ENSG00000227136 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA Atac153_MAPQ30_peak_7222 chrX 134598848 134598848 + 4.57314 NA Intergenic Intergenic 42980 NR_024359 399668 Hs.374414 NM_203306 LINC00086 NCRNA00086 long intergenic non-protein coding RNA 86 ncRNA Atac153_MAPQ30_peak_2390 chr16 10727931 10727931 + 4.57314 NA intron (NM_144674, intron 6 of 6) intron (NM_144674, intron 6 of 6) -53392 NM_001424 2013 Hs.531561 NM_001424 HPRD:11893 EMP2 NPHS10|XMP epithelial membrane protein 2 protein-coding Atac153_MAPQ30_peak_2973 chr17 80289452 80289452 + 4.57314 NA intron (NM_003004, intron 1 of 4) MER53|DNA|hAT 2469 NM_003004 6398 Hs.558009 NM_003004 HPRD:04004 SECTM1 K12 secreted and transmembrane 1 protein-coding Atac153_MAPQ30_peak_323 chr1 112273097 112273097 + 4.57314 NA intron (NM_198926, intron 1 of 1) intron (NM_198926, intron 1 of 1) 8949 NM_019099 55924 Hs.193406 NM_019099 HPRD:14246 FAM212B C1orf183 family with sequence similarity 212, member B protein-coding Atac153_MAPQ30_peak_6654 chr9 82344080 82344080 + 4.57314 NA Intergenic Intergenic -95365 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 - long intergenic non-protein coding RNA 1507 ncRNA Atac153_MAPQ30_peak_753 chr10 49944143 49944143 + 4.57314 NA intron (NM_020945, intron 11 of 61) intron (NM_020945, intron 11 of 61) 50625 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding Atac153_MAPQ30_peak_3230 chr19 13696144 13696144 + 4.57314 NA Intergenic (TTCA)n|Simple_repeat|Simple_repeat -78870 NM_023035 773 Hs.501632 NM_000068 HPRD:03004 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|FHM|HPCA|MHP|MHP1|SCA6 calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein-coding Atac153_MAPQ30_peak_6649 chr9 81192631 81192631 + 4.57314 NA Intergenic Intergenic 280640 NM_021154 29968 Hs.494261 NM_021154 HPRD:17918 PSAT1 EPIP|PSA|PSAT phosphoserine aminotransferase 1 protein-coding Atac153_MAPQ30_peak_1159 chr11 44221012 44221012 + 4.57314 NA intron (NM_207122, intron 9 of 13) intron (NM_207122, intron 9 of 13) 103265 NM_000401 2132 Hs.368404 NM_000401 HPRD:00599 EXT2 SOTV exostosin glycosyltransferase 2 protein-coding Atac153_MAPQ30_peak_4069 chr20 32242416 32242416 + 4.57314 NA Intergenic L2|LINE|L2 -7676 NM_080825 128864 Hs.324104 NM_080825 HPRD:12749 C20orf144 dJ63M2.6 chromosome 20 open reading frame 144 protein-coding Atac153_MAPQ30_peak_1608 chr12 105357113 105357113 + 4.57314 NA Intergenic MIR|SINE|MIR -22985 NM_152318 121053 Hs.295563 NM_152318 C12orf45 - chromosome 12 open reading frame 45 protein-coding Atac153_MAPQ30_peak_5865 chr6 169206541 169206541 + 4.57314 NA Intergenic L1MB7|LINE|L1 364710 NM_001166412 64094 Hs.487200 NM_022138 HPRD:06244 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding Atac153_MAPQ30_peak_3088 chr18 46098924 46098924 + 4.57314 NA intron (NM_001142397, intron 2 of 12) MIRb|SINE|MIR 33497 NM_001142397 9811 Hs.145230 NM_014772 HPRD:11083 CTIF Gm672|KIAA0427 CBP80/20-dependent translation initiation factor protein-coding Atac153_MAPQ30_peak_5982 chr7 44489012 44489012 + 4.57314 NA intron (NM_015332, intron 2 of 5) L2|LINE|L2 41373 NM_015332 23386 Hs.488171 NM_015332 NUDCD3 NudCL NudC domain containing 3 protein-coding Atac153_MAPQ30_peak_776 chr10 70220402 70220402 + 4.57314 NA intron (NR_102264, intron 5 of 21) AluSq|SINE|Alu 11328 NM_001080449 1763 Hs.532446 NM_001080449 ENSG00000138346 DNA2 DNA2L|PEOA6|SCKL8|hDNA2 DNA replication helicase/nuclease 2 protein-coding Atac153_MAPQ30_peak_5452 chr5 150976501 150976501 + 4.57314 NA Intergenic MIRb|SINE|MIR -27996 NM_001447 2196 Hs.591255 NM_001447 HPRD:05041 FAT2 CDHF8|CDHR9|HFAT2|MEGF1 FAT atypical cadherin 2 protein-coding Atac153_MAPQ30_peak_5155 chr4 141711915 141711915 + 4.57314 NA Intergenic MIR|SINE|MIR -34444 NM_015130 23158 Hs.480819 NM_015130 HPRD:11115 TBC1D9 MDR1 TBC1 domain family, member 9 (with GRAM domain) protein-coding Atac153_MAPQ30_peak_4175 chr20 55530146 55530146 + 4.57314 NA Intergenic Intergenic -258606 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_867 chr10 98115159 98115159 + 4.57314 NA intron (NR_104297, intron 1 of 5) intron (NR_104297, intron 1 of 5) 1757 NM_001284323 93377 Hs.12449 NM_033207 HPRD:15521 OPALIN HTMP10|TMEM10|TMP10 oligodendrocytic myelin paranodal and inner loop protein protein-coding Atac153_MAPQ30_peak_5679 chr6 41376704 41376704 + 4.57314 NA Intergenic CpG 73176 NM_001199510 9436 Hs.194721 NM_004828 HPRD:05168 NCR2 CD336|LY95|NK-p44|NKP44|dJ149M18.1 natural cytotoxicity triggering receptor 2 protein-coding Atac153_MAPQ30_peak_6420 chr8 95287428 95287428 + 4.57314 NA Intergenic Intergenic -12881 NM_005261 2669 Hs.654463 NM_005261 HPRD:11553 GEM KIR GTP binding protein overexpressed in skeletal muscle protein-coding Atac153_MAPQ30_peak_186 chr1 34525224 34525224 + 4.57314 NA intron (NM_052896, intron 2 of 69) intron (NM_052896, intron 2 of 69) 105651 NM_001281956 114784 Hs.656915 NM_052896 HPRD:13094 CSMD2 dJ1007G16.1|dJ1007G16.2|dJ947L8.1 CUB and Sushi multiple domains 2 protein-coding Atac153_MAPQ30_peak_4079 chr20 34708671 34708671 + 4.57314 NA intron (NM_001258329, intron 2 of 22) L2a|LINE|L2 28039 NM_177996 2036 Hs.437422 NM_012156 HPRD:04193 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1-like 1 protein-coding Atac153_MAPQ30_peak_1437 chr12 3683271 3683271 + 4.57314 NA intron (NM_001256536, intron 6 of 9) intron (NM_001256536, intron 6 of 9) 82907 NM_019854 56341 Hs.504530 NM_019854 HPRD:11029 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding Atac153_MAPQ30_peak_3229 chr19 13553435 13553435 + 4.57314 NA intron (NM_001174080, intron 3 of 46) MIR|SINE|MIR 63839 NM_001127222 773 Hs.501632 NM_000068 HPRD:03004 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|FHM|HPCA|MHP|MHP1|SCA6 calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein-coding Atac153_MAPQ30_peak_477 chr1 201992588 201992588 + 4.57314 NA Intergenic Intergenic 12898 NM_001114309 1999 Hs.603657 NM_004433 HPRD:03722 ELF3 EPR-1|ERT|ESE-1|ESX E74-like factor 3 (ets domain transcription factor, epithelial-specific ) protein-coding Atac153_MAPQ30_peak_567 chr1 228938595 228938595 + 4.57314 NA Intergenic Intergenic 67771 NM_021205 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding Atac153_MAPQ30_peak_5391 chr5 131312852 131312852 + 4.57314 NA intron (NM_001009185, intron 9 of 20) intron (NM_001009185, intron 9 of 20) -31461 NM_001278059 728637 Hs.631802 NM_001278059 LOC728637 - uncharacterized LOC728637 protein-coding Atac153_MAPQ30_peak_5421 chr5 138492407 138492407 + 4.57314 NA intron (NM_022464, intron 1 of 9) MLT1D|LTR|ERVL-MaLR 41658 NM_022464 64374 Hs.483521 NM_022464 HPRD:12150 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding Atac153_MAPQ30_peak_2063 chr14 100590932 100590932 + 4.57314 NA intron (NM_016337, intron 4 of 13) MIR3|SINE|MIR 35080 NM_206918 123099 Hs.159643 NM_206918 DEGS2 C14orf66|DES2|FADS8 delta(4)-desaturase, sphingolipid 2 protein-coding Atac153_MAPQ30_peak_3082 chr18 45183320 45183320 + 4.57314 NA Intergenic Intergenic 273650 NM_005901 4087 Hs.12253 NM_005901 HPRD:03221 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding Atac153_MAPQ30_peak_396 chr1 157157494 157157494 + 4.57314 NA Intergenic Intergenic -49111 NM_001145312 2117 Hs.105636 NM_005240 HPRD:01282 ETV3 METS|PE-1|PE1|bA110J1.4 ets variant 3 protein-coding Atac153_MAPQ30_peak_6921 chrX 17419776 17419776 + 4.57314 NA intron (NM_001291867, intron 1 of 8) MLT1C|LTR|ERVL-MaLR -24228 NR_039925 100616249 NR_039925 MIR4768 - microRNA 4768 ncRNA Atac153_MAPQ30_peak_1861 chr13 106581288 106581288 + 4.57314 NA Intergenic Intergenic 222109 NR_046391 144920 Hs.567700 NR_046391 LINC00343 LINC00344|NCRNA00343|NCRNA00344 long intergenic non-protein coding RNA 343 ncRNA Atac153_MAPQ30_peak_4154 chr20 49724994 49724994 + 4.57314 NA Intergenic MIRb|SINE|MIR -85319 NM_002237 3755 Hs.118695 NM_002237 HPRD:04809 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel, subfamily G, member 1 protein-coding Atac153_MAPQ30_peak_1547 chr12 58465830 58465830 + 4.57314 NA Intergenic Intergenic 130385 NM_033276 91419 Hs.61188 NM_033276 HPRD:17256 XRCC6BP1 KUB3 XRCC6 binding protein 1 protein-coding Atac153_MAPQ30_peak_225 chr1 42360587 42360587 + 4.57314 NA intron (NR_038260, intron 1 of 2) intron (NR_038260, intron 1 of 2) 23791 NM_024503 59269 Hs.403972 NM_024503 HPRD:09442 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding Atac153_MAPQ30_peak_6705 chr9 96426714 96426714 + 4.57314 NA intron (NM_005392, intron 14 of 21) intron (NM_005392, intron 14 of 21) 87805 NM_005392 5253 Hs.211441 NM_005392 HPRD:05071 PHF2 CENP-35|GRC5|JHDM1E PHD finger protein 2 protein-coding Atac153_MAPQ30_peak_670 chr10 13713726 13713726 + 4.57314 NA intron (NM_018027, intron 16 of 24) intron (NM_018027, intron 16 of 24) 84787 NM_003675 8559 Hs.729158 NM_003675 HPRD:05407 PRPF18 PRP18|hPrp18 pre-mRNA processing factor 18 protein-coding Atac153_MAPQ30_peak_6354 chr8 41190631 41190631 + 4.57314 NA Intergenic Intergenic -23641 NM_003012 6422 Hs.213424 NM_003012 HPRD:09165 SFRP1 FRP|FRP-1|FRP1|FrzA|SARP2 secreted frizzled-related protein 1 protein-coding Atac153_MAPQ30_peak_759 chr10 52753576 52753576 + 4.57314 NA intron (NM_001098512, intron 1 of 17) intron (NM_001098512, intron 1 of 17) 2665 NM_001098512 5592 Hs.407535 NM_006258 HPRD:08910 PRKG1 1|AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase, cGMP-dependent, type I protein-coding Atac153_MAPQ30_peak_3551 chr2 62472650 62472650 + 4.57314 NA Intergenic AluJb|SINE|Alu 39689 NR_049824 100847087 NR_049824 miRBase:MI0018171 MIR5192 - microRNA 5192 ncRNA Atac153_MAPQ30_peak_4729 chr3 59716915 59716915 + 4.57314 NA Intergenic MIR|SINE|MIR -681200 NM_198463 200844 Hs.368434 NM_198463 HPRD:13458 C3orf67 - chromosome 3 open reading frame 67 protein-coding Atac153_MAPQ30_peak_4362 chr22 26165158 26165158 + 4.57314 NA exon (NM_032608, exon 4 of 44) exon (NM_032608, exon 4 of 44) 27038 NM_032608 84700 Hs.417959 NM_032608 HPRD:09529 MYO18B - myosin XVIIIB protein-coding Atac153_MAPQ30_peak_6799 chr9 126920755 126920755 + 4.57314 NA Intergenic L1MEf|LINE|L1 -99130 NM_001166167 10783 Hs.197071 NM_014397 HPRD:05348 NEK6 SID6-1512 NIMA-related kinase 6 protein-coding Atac153_MAPQ30_peak_7109 chrX 78546602 78546602 + 4.57314 NA Intergenic L1PBa|LINE|L1 76447 NM_004867 9452 Hs.17109 NM_004867 HPRD:02200 ITM2A BRICD2A|E25A integral membrane protein 2A protein-coding Atac153_MAPQ30_peak_1067 chr11 7986713 7986713 + 4.57314 NA Intergenic Intergenic -1654 NM_176821 338322 Hs.449636 NM_176821 HPRD:14802 NLRP10 CLR11.1|NALP10|NOD8|PAN5|PYNOD NLR family, pyrin domain containing 10 protein-coding Atac153_MAPQ30_peak_1074 chr11 8744024 8744024 + 4.57314 NA intron (NM_139157, intron 3 of 18) intron (NM_139157, intron 3 of 18) 37038 NR_002977 677826 Hs.745552 NR_002977 SNORA45B ACA3-2|SNORA45 small nucleolar RNA, H/ACA box 45B snoRNA Atac153_MAPQ30_peak_4263 chr21 37396516 37396516 + 4.57314 NA Intergenic Intergenic 18898 NR_110419 100996609 Hs.742062 NR_110419 LINC01436 - long intergenic non-protein coding RNA 1436 ncRNA Atac153_MAPQ30_peak_7072 chrX 66097914 66097914 + 4.57314 NA Intergenic Intergenic -238774 NM_001199687 60401 Hs.302017 NM_021783 HPRD:02230 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding Atac153_MAPQ30_peak_3668 chr2 109923033 109923033 + 4.57314 NA intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 7048 NR_036224 100423027 NR_036224 miRBase:MI0015870 MIR4266 - microRNA 4266 ncRNA Atac153_MAPQ30_peak_7204 chrX 127789496 127789496 + 4.57314 NA Intergenic Intergenic -603114 NM_138289 139741 Hs.680125 NM_138289 HPRD:06439 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin-related protein T1 protein-coding Atac153_MAPQ30_peak_5036 chr4 16049903 16049903 + 4.57314 NA intron (NM_001145848, intron 2 of 26) intron (NM_001145848, intron 2 of 26) 27838 NM_001145852 8842 Hs.614734 NM_006017 HPRD:05079 PROM1 AC133|CD133|CORD12|MCDR2|PROML1|RP41|STGD4 prominin 1 protein-coding Atac153_MAPQ30_peak_2815 chr17 38911440 38911440 + 4.57314 NA exon (NM_181534, exon 1 of 8) exon (NM_181534, exon 1 of 8) 144 NM_181534 147183 Hs.55412 NM_181534 HPRD:17242 KRT25 KRT25A keratin 25 protein-coding Atac153_MAPQ30_peak_2839 chr17 43481581 43481581 + 4.57314 NA intron (NM_001282290, intron 6 of 16) intron (NM_001282290, intron 6 of 16) 21431 NM_199282 201176 Hs.205326 NM_174919 HPRD:12477 ARHGAP27 CAMGAP1|PP905|SH3D20|SH3P20 Rho GTPase activating protein 27 protein-coding Atac153_MAPQ30_peak_5727 chr6 86829088 86829088 + 4.57314 NA Intergenic LTR67B|LTR|ERVL -440637 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG|bA33E24.2 small nucleolar RNA host gene 5 (non-protein coding) ncRNA Atac153_MAPQ30_peak_452 chr1 180870752 180870752 + 4.57314 NA Intergenic Intergenic -11561 NM_020950 57710 Hs.734816 NM_020950 KIAA1614 - KIAA1614 protein-coding Atac153_MAPQ30_peak_2614 chr16 85820228 85820228 + 4.57314 NA intron (NM_006067, intron 2 of 4) intron (NM_006067, intron 2 of 4) 12920 NM_006067 10328 Hs.173162 NM_006067 HPRD:05350 EMC8 C16orf2|C16orf4|COX4NB|FAM158B|NOC4 ER membrane protein complex subunit 8 protein-coding Atac153_MAPQ30_peak_4103 chr20 41069689 41069689 + 4.57314 NA intron (NM_133170, intron 9 of 31) MLT2D|LTR|ERVL -244434 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA Atac153_MAPQ30_peak_6779 chr9 120566131 120566131 + 4.57314 NA Intergenic MLT1I|LTR|ERVL-MaLR 99678 NM_138554 7099 Hs.174312 NM_003266 HPRD:04325 TLR4 ARMD10|CD284|TLR-4|TOLL toll-like receptor 4 protein-coding Atac153_MAPQ30_peak_4510 chr22 48927149 48927149 + 4.57314 NA intron (NM_001082967, intron 1 of 3) intron (NM_001082967, intron 1 of 3) 16050 NR_038917 284933 Hs.159057 NR_038917 ENSG00000219016 LOC284933 - uncharacterized LOC284933 ncRNA Atac153_MAPQ30_peak_4509 chr22 48852683 48852683 + 4.57314 NA Intergenic ERVL-B4-int|LTR|ERVL -32589 NM_001082967 25817 Hs.436854 NM_015381 HPRD:13295 FAM19A5 QLLK5208|TAFA-5|TAFA5|UNQ5208 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 protein-coding Atac153_MAPQ30_peak_6452 chr8 106275543 106275543 + 4.57314 NA Intergenic L1PA11|LINE|L1 -55604 NM_012082 23414 Hs.431009 NM_012082 HPRD:04737 ZFPM2 DIH3|FOG2|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding Atac153_MAPQ30_peak_3855 chr2 216734702 216734702 + 4.57314 NA Intergenic Intergenic -26443 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA Atac153_MAPQ30_peak_1995 chr14 76812379 76812379 + 4.57314 NA Intergenic MLT1C|LTR|ERVL-MaLR -25311 NM_004452 2103 Hs.435845 NM_004452 HPRD:03700 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen-related receptor beta protein-coding Atac153_MAPQ30_peak_1933 chr14 58393753 58393753 + 4.57314 NA Intergenic Intergenic -61161 NM_001206920 341880 Hs.28280 NM_001080455 ENSG00000151812 SLC35F4 C14orf36|c14_5373 solute carrier family 35, member F4 protein-coding Atac153_MAPQ30_peak_1459 chr12 12221497 12221497 + 4.57314 NA Intergenic AluJr4|SINE|Alu -2381 NM_138723 79370 Hs.210343 NM_030766 HPRD:05841 BCL2L14 BCLG BCL2-like 14 (apoptosis facilitator) protein-coding Atac153_MAPQ30_peak_560 chr1 228277185 228277185 + 4.57314 NA intron (NM_001024227, intron 1 of 4) intron (NM_001024227, intron 1 of 4) 6334 NM_001024228 375 Hs.286221 NM_001658 HPRD:00054 ARF1 - ADP-ribosylation factor 1 protein-coding Atac153_MAPQ30_peak_1419 chr12 644939 644939 + 4.57314 NA intron (NM_173593, intron 2 of 19) intron (NM_173593, intron 2 of 19) 74640 NM_001294345 4815 Hs.655804 NM_016533 HPRD:09530 NINJ2 - ninjurin 2 protein-coding Atac153_MAPQ30_peak_978 chr10 128336787 128336787 + 4.57314 NA Intergenic Intergenic -126777 NM_001004298 118611 Hs.587663 NM_001004298 HPRD:16587 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding Atac153_MAPQ30_peak_515 chr1 209142991 209142991 + 4.57314 NA Intergenic Intergenic -459177 NM_001104548 642587 Hs.510543 NM_001104548 MIR205HG LINC00510 MIR205 host gene (non-protein coding) protein-coding Atac153_MAPQ30_peak_1314 chr11 112425131 112425131 + 4.57314 NA intron (NR_104155, intron 1 of 3) MIRb|SINE|MIR 1394 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LOC387810 - uncharacterized LOC387810 ncRNA Atac153_MAPQ30_peak_5328 chr5 71292395 71292395 + 4.57314 NA Intergenic Intergenic -110723 NM_005909 4131 Hs.335079 NM_005909 HPRD:01139 MAP1B FUTSCH|MAP5|PPP1R102 microtubule-associated protein 1B protein-coding Atac153_MAPQ30_peak_2353 chr16 1528198 1528198 + 4.57314 NA Intergenic Intergenic -3113 NM_001114331 1186 Hs.459649 NM_001287 HPRD:04103 CLCN7 CLC-7|CLC7|OPTA2|OPTB4|PPP1R63 chloride channel, voltage-sensitive 7 protein-coding Atac153_MAPQ30_peak_1113 chr11 18032211 18032211 + 4.57314 NA intron (NR_104041, intron 1 of 9) L2a|LINE|L2 2498 NM_012139 26297 Hs.32470 NM_012139 HPRD:06926 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding Atac153_MAPQ30_peak_3954 chr2 240837789 240837789 + 4.57314 NA Intergenic Intergenic 44722 NR_039949 100616417 NR_039949 miRBase:MI0017433 MIR4786 - microRNA 4786 ncRNA Atac153_MAPQ30_peak_6852 chr9 138022495 138022495 + 4.57314 NA Intergenic Intergenic 42981 NM_001282611 10439 Hs.522484 NM_006334 HPRD:09249 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding Atac153_MAPQ30_peak_5761 chr6 112006289 112006289 + 4.57314 NA intron (NM_153047, intron 9 of 10) intron (NM_153047, intron 9 of 10) 34976 NM_153047 2534 Hs.390567 NM_002037 HPRD:00655 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding Atac153_MAPQ30_peak_4517 chr22 49452226 49452226 + 4.57314 NA Intergenic Intergenic 189644 NR_038944 100128946 Hs.535676 NR_038944 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA Atac153_MAPQ30_peak_7284 chrX 152002653 152002653 + 4.57314 NA intron (NM_001129765, intron 2 of 8) intron (NM_001129765, intron 2 of 8) 3142 NM_001129765 50814 Hs.57698 NM_015922 HPRD:02229 NSDHL H105E3|SDR31E1|XAP104 NAD(P) dependent steroid dehydrogenase-like protein-coding Atac153_MAPQ30_peak_5860 chr6 168643419 168643419 + 4.57314 NA promoter-TSS (NR_110870) promoter-TSS (NR_110870) -199 NR_110870 101929420 Hs.571211 NR_110870 ENSG00000234647 LOC101929420 - uncharacterized LOC101929420 ncRNA Atac153_MAPQ30_peak_6028 chr7 61969330 61969330 + 4.57314 NA Intergenic ALR/Alpha|Satellite|centr 795104 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo Atac153_MAPQ30_peak_4570 chr3 12946033 12946033 + 4.57314 NA intron (NM_014869, intron 12 of 13) intron (NM_014869, intron 12 of 13) -62952 NM_001007073 6161 Hs.265174 NM_000994 HPRD:17995 RPL32 L32 ribosomal protein L32 protein-coding Atac153_MAPQ30_peak_6790 chr9 123931655 123931655 + 4.57314 NA intron (NM_007018, intron 36 of 41) intron (NM_007018, intron 36 of 41) 32710 NM_016322 51552 Hs.371563 NM_016322 HPRD:06693 RAB14 FBP|RAB-14 RAB14, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_147 chr1 25187722 25187722 + 4.57314 NA Intergenic Intergenic 58185 NR_106789 102465437 NR_106789 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA Atac153_MAPQ30_peak_4284 chr21 40412072 40412072 + 4.57314 NA Intergenic L1MC4a|LINE|L1 -62372 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LOC101928435 - uncharacterized LOC101928435 ncRNA Atac153_MAPQ30_peak_370 chr1 151337158 151337158 + 4.57314 NA exon (NM_001258288, exon 11 of 11) exon (NM_001258288, exon 11 of 11) 8052 NM_001258289 8991 Hs.632460 NM_003944 HPRD:05007 SELENBP1 HEL-S-134P|LPSB|SBP56|SP56|hSBP selenium binding protein 1 protein-coding Atac153_MAPQ30_peak_1564 chr12 71950587 71950587 + 4.57314 NA intron (NR_110596, intron 6 of 19) intron (NR_110596, intron 6 of 19) -107090 NM_031435 83591 Hs.245798 NM_031435 HPRD:10896 THAP2 - THAP domain containing, apoptosis associated protein 2 protein-coding Atac153_MAPQ30_peak_5788 chr6 135134165 135134165 + 4.57314 NA Intergenic AluY|SINE|Alu 137095 NM_170771 64577 Hs.486520 NM_022568 HPRD:06974 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family, member A1 protein-coding Atac153_MAPQ30_peak_4592 chr3 15214450 15214450 + 4.57314 NA intron (NR_027927, intron 3 of 4) MLT1H2|LTR|ERVL-MaLR 33016 NR_027927 344875 Hs.722756 NR_027927 ENSG00000230524 COL6A4P1 COL6A4|COL6A4P|DIVA|DVWA|VWA6 collagen, type VI, alpha 4 pseudogene 1 pseudo Atac153_MAPQ30_peak_3038 chr18 25712396 25712396 + 4.57314 NA intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) 45049 NM_001792 1000 Hs.464829 NM_001792 HPRD:00226 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2, type 1, N-cadherin (neuronal) protein-coding Atac153_MAPQ30_peak_2871 chr17 54979659 54979659 + 4.57314 NA intron (NM_005082, intron 3 of 8) intron (NM_005082, intron 3 of 8) -10943 NR_037408 100500827 NR_037408 miRBase:MI0016004 MIR3614 - microRNA 3614 ncRNA Atac153_MAPQ30_peak_2230 chr15 71570919 71570919 + 4.57314 NA intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -89521 NR_120350 101929196 Hs.680472 NR_120348 LOC101929196 - uncharacterized LOC101929196 ncRNA Atac153_MAPQ30_peak_1792 chr13 35166863 35166863 + 4.57314 NA intron (NR_047036, intron 1 of 2) intron (NR_047036, intron 1 of 2) 47959 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA Atac153_MAPQ30_peak_5624 chr6 28783212 28783212 + 4.57314 NA Intergenic Intergenic 48242 NR_033379 401242 Hs.448285 NR_033379 ENSG00000225595 LOC401242 - uncharacterized LOC401242 ncRNA Atac153_MAPQ30_peak_6279 chr8 11219094 11219094 + 4.57314 NA intron (NR_001578, intron 5 of 8) intron (NR_001578, intron 5 of 8) -6817 NR_026814 83656 Hs.583896 NM_054017 ENSG00000184608 C8orf12 - chromosome 8 open reading frame 12 ncRNA Atac153_MAPQ30_peak_3569 chr2 70833622 70833622 + 4.57314 NA Intergenic Intergenic -52475 NM_001099691 7039 Hs.170009 NM_003236 HPRD:07522 TGFA TFGA transforming growth factor, alpha protein-coding Atac153_MAPQ30_peak_6667 chr9 86690699 86690699 + 4.57314 NA non-coding (NR_110995, exon 3 of 9) non-coding (NR_110995, exon 3 of 9) 12341 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA Atac153_MAPQ30_peak_3698 chr2 121625422 121625422 + 4.57314 NA intron (NM_005270, intron 1 of 12) intron (NM_005270, intron 1 of 12) 70555 NM_005270 2736 Hs.111867 NM_005270 HPRD:01312 GLI2 HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding Atac153_MAPQ30_peak_5360 chr5 95586263 95586263 + 4.57314 NA Intergenic MLT1J|LTR|ERVL-MaLR 171421 NR_030309 693168 NR_030309 miRBase:MI0003590 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA Atac153_MAPQ30_peak_1352 chr11 119681191 119681191 + 4.57314 NA Intergenic Intergenic 80898 NR_120587 102724301 Hs.637640 NR_120587 LOC102724301 - uncharacterized LOC102724301 ncRNA Atac153_MAPQ30_peak_1965 chr14 69241953 69241953 + 4.57314 NA Intergenic MLT1H|LTR|ERVL-MaLR 18678 NM_004926 677 Hs.85155 NM_004926 HPRD:03041 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding Atac153_MAPQ30_peak_3688 chr2 120985515 120985515 + 4.57314 NA Intergenic Intergenic -4531 NM_024121 79134 Hs.376722 NM_024121 TMEM185B FAM11B transmembrane protein 185B protein-coding Atac153_MAPQ30_peak_4242 chr21 32325891 32325891 + 4.57314 NA Intergenic L1MEd|LINE|L1 -72017 NM_175858 337880 Hs.407654 NM_175858 HPRD:11196 KRTAP11-1 HACL-1|HACL1|KAP11.1 keratin associated protein 11-1 protein-coding Atac153_MAPQ30_peak_645 chr10 4676473 4676473 + 4.57314 NA Intergenic L1PB3|LINE|L1 -21875 NR_015425 338588 Hs.121365 NR_015425 LINC00705 - long intergenic non-protein coding RNA 705 ncRNA Atac153_MAPQ30_peak_4425 chr22 36081259 36081259 + 4.57314 NA Intergenic AluSz|SINE|Alu -32660 NM_030642 80831 Hs.326561 NM_030642 HPRD:06265 APOL5 APOL-V|APOLV apolipoprotein L, 5 protein-coding Atac153_MAPQ30_peak_852 chr10 88437254 88437254 + 4.57314 NA intron (NM_001080115, intron 1 of 6) intron (NM_001080115, intron 1 of 6) 8828 NM_007078 11155 Hs.657271 NM_007078 HPRD:16172 LDB3 CMD1C|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding Atac153_MAPQ30_peak_18 chr1 3135653 3135653 + 4.57314 NA intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 91114 NR_036215 100422968 NR_036215 MIR4251 - microRNA 4251 ncRNA Atac153_MAPQ30_peak_6506 chr8 135485028 135485028 + 4.57314 NA Intergenic Intergenic -125286 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA Atac153_MAPQ30_peak_324 chr1 112422319 112422319 + 4.57314 NA intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) -22792 NR_046783 100874295 Hs.738190 NR_046783 KCND3-IT1 - KCND3 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_7047 chrX 57236338 57236338 + 4.57314 NA Intergenic L1MA2|LINE|L1 -72280 NM_019003 54466 Hs.460725 NM_019003 HPRD:06725 SPIN2A DXF34|SPIN2|dJ323P24.1 spindlin family, member 2A protein-coding Atac153_MAPQ30_peak_5012 chr4 8206797 8206797 + 4.57314 NA intron (NM_018986, intron 1 of 17) intron (NM_018986, intron 1 of 17) 5737 NM_018986 54436 Hs.479116 NM_018986 HPRD:11556 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding Atac153_MAPQ30_peak_4125 chr20 44480103 44480103 + 4.57314 NA intron (NM_005469, intron 2 of 5) intron (NM_005469, intron 2 of 5) 5945 NM_005469 10005 Hs.444776 NM_005469 HPRD:06998 ACOT8 HNAACTE|PTE-1|PTE-2|PTE1|PTE2|hACTE-III|hTE acyl-CoA thioesterase 8 protein-coding Atac153_MAPQ30_peak_2806 chr17 34241046 34241046 + 4.57314 NA Intergenic Intergenic 16257 NR_028000 201299 Hs.194411 NM_145654 HPRD:15205 RDM1 RAD52B RAD52 motif containing 1 protein-coding Atac153_MAPQ30_peak_5420 chr5 138379205 138379205 + 4.57314 NA intron (NM_022464, intron 4 of 9) intron (NM_022464, intron 4 of 9) 154860 NM_022464 64374 Hs.483521 NM_022464 HPRD:12150 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding Atac153_MAPQ30_peak_5498 chr5 171991531 171991531 + 4.57314 NA Intergenic Intergenic -76745 NM_001142651 54492 Hs.91521 NM_001142651 ENSG00000214357 NEURL1B NEURL3|hNeur2|neur2 neuralized E3 ubiquitin protein ligase 1B protein-coding Atac153_MAPQ30_peak_5612 chr6 21499542 21499542 + 4.57314 NA intron (NR_103790, intron 2 of 3) MLT1J|LTR|ERVL-MaLR 12581 NR_103790 100874531 Hs.112750 NR_103790 LINC00581 - long intergenic non-protein coding RNA 581 ncRNA Atac153_MAPQ30_peak_4070 chr20 32580604 32580604 + 4.57314 NA promoter-TSS (NM_007367) promoter-TSS (NM_007367) -854 NM_016732 22913 Hs.136947 NM_007367 HPRD:11480 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding Atac153_MAPQ30_peak_887 chr10 104548306 104548306 + 4.57314 NA intron (NM_017787, intron 1 of 3) intron (NM_017787, intron 1 of 3) 12418 NM_017787 54838 Hs.500897 NM_017787 HPRD:12567 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1-like protein-coding Atac153_MAPQ30_peak_2606 chr16 84852644 84852644 + 4.57314 NA promoter-TSS (NM_031476) promoter-TSS (NM_031476) -943 NM_031476 83716 Hs.513779 NM_031476 HPRD:13186 CRISPLD2 CRISP11|LCRISP2 cysteine-rich secretory protein LCCL domain containing 2 protein-coding Atac153_MAPQ30_peak_3681 chr2 119032754 119032754 + 4.57314 NA Intergenic Intergenic 186704 NM_016133 51141 Hs.7089 NM_016133 HPRD:16361 INSIG2 - insulin induced gene 2 protein-coding Atac153_MAPQ30_peak_4962 chr4 2072912 2072912 + 4.57314 NA TTS (NM_181808) TTS (NM_181808) 11673 NM_178557 339983 Hs.318529 NM_178557 HPRD:08224 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8-like (GCN5-related, putative) protein-coding Atac153_MAPQ30_peak_7128 chrX 94142837 94142837 + 4.57314 NA Intergenic L1MA5|LINE|L1 1213825 NM_001171111 286499 Hs.110069 NM_173698 HPRD:06562 FAM133A CT115 family with sequence similarity 133, member A protein-coding Atac153_MAPQ30_peak_3233 chr19 14879597 14879597 + 4.57314 NA intron (NM_013447, intron 5 of 20) intron (NM_013447, intron 5 of 20) 8142 NM_001271052 30817 Hs.531619 NM_013447 HPRD:07308 EMR2 CD312 egf-like module containing, mucin-like, hormone receptor-like 2 protein-coding Atac153_MAPQ30_peak_1292 chr11 86584619 86584619 + 4.57314 NA intron (NR_120592, intron 2 of 2) AluSz|SINE|Alu -15623 NR_045004 8587 Hs.741959 NR_045004 ENSG00000255203 OR7E2P OR11-6|OR7E143P|OR7E51P|OR7E52P|OR7F2P|OST245|hg94 olfactory receptor, family 7, subfamily E, member 2 pseudogene pseudo Atac153_MAPQ30_peak_4299 chr21 43684085 43684085 + 4.57314 NA intron (NM_207628, intron 4 of 16) L2b|LINE|L2 44077 NM_207174 9619 Hs.124649 NM_004915 HPRD:04355 ABCG1 ABC8|WHITE1 ATP-binding cassette, sub-family G (WHITE), member 1 protein-coding Atac153_MAPQ30_peak_721 chr10 42884073 42884073 + 4.57314 NA Intergenic AluSx1|SINE|Alu -20580 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo Atac153_MAPQ30_peak_6449 chr8 104006817 104006817 + 4.57314 NA Intergenic HERV16-int|LTR|ERVL -26431 NM_001695 528 Hs.86905 NM_001695 HPRD:04371 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 protein-coding Atac153_MAPQ30_peak_5557 chr6 2644462 2644462 + 4.57314 NA Intergenic Intergenic -9164 NM_152554 154386 Hs.680574 NM_152554 C6orf195 bA145H9.2 chromosome 6 open reading frame 195 protein-coding Atac153_MAPQ30_peak_4853 chr3 134462304 134462304 + 4.57314 NA Intergenic Intergenic -51795 NM_004441 2047 Hs.116092 NM_004441 HPRD:02790 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding Atac153_MAPQ30_peak_7176 chrX 118105818 118105818 + 4.57314 NA Intergenic Intergenic -2759 NM_001031855 79836 Hs.144266 NM_024778 HPRD:06708 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding Atac153_MAPQ30_peak_7057 chrX 62333554 62333554 + 4.57314 NA Intergenic L1PA13|LINE|L1 237664 NM_001012968 139886 Hs.612782 NM_001012968 HPRD:12556 SPIN4 - spindlin family, member 4 protein-coding Atac153_MAPQ30_peak_1186 chr11 47260615 47260615 + 4.57314 NA TTS (NM_001610) TTS (NM_001610) -9236 NM_001251934 10062 Hs.438863 NM_005693 HPRD:07211 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1, group H, member 3 protein-coding Atac153_MAPQ30_peak_5735 chr6 91389131 91389131 + 4.57314 NA Intergenic MIRc|SINE|MIR -92111 NM_003188 6885 Hs.594838 NM_003188 HPRD:04011 MAP3K7 MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding Atac153_MAPQ30_peak_5133 chr4 103541886 103541886 + 4.57314 NA Intergenic Intergenic 119400 NM_001165412 4790 Hs.618430 NM_003998 HPRD:01238 NFKB1 EBP-1|KBF1|NF-kB1|NF-kappa-B|NF-kappaB|NFKB-p105|NFKB-p50|NFkappaB|p105|p50 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 protein-coding Atac153_MAPQ30_peak_6365 chr8 46951207 46951207 + 4.57314 NA Intergenic Intergenic -801301 NR_027012 497634 Hs.406982 NR_027012 ENSG00000253314 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA Atac153_MAPQ30_peak_2867 chr17 53398381 53398381 + 4.57314 NA 3' UTR (NM_002126, exon 4 of 4) 3' UTR (NM_002126, exon 4 of 4) 56060 NM_002126 3131 Hs.196952 NM_002126 HPRD:00797 HLF - hepatic leukemia factor protein-coding Atac153_MAPQ30_peak_1216 chr11 64179797 64179797 + 4.57314 NA Intergenic L1MB5|LINE|L1 -36732 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LOC100996455 - uncharacterized LOC100996455 ncRNA Atac153_MAPQ30_peak_3653 chr2 106037613 106037613 + 4.57314 NA intron (NM_201557, intron 1 of 5) intron (NM_201557, intron 1 of 5) 17617 NM_201557 2274 Hs.443687 NM_001450 HPRD:04026 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding Atac153_MAPQ30_peak_3944 chr2 239745022 239745022 + 4.57314 NA Intergenic MLT1K|LTR|ERVL-MaLR -11651 NM_057179 117581 Hs.422585 NM_057179 HPRD:09616 TWIST2 DERMO1|FFDD3|SETLSS|bHLHa39 twist family bHLH transcription factor 2 protein-coding Atac153_MAPQ30_peak_368 chr1 150119362 150119362 + 4.57314 NA Intergenic Intergenic -2808 NM_016274 51177 Hs.438824 NM_016274 HPRD:12217 PLEKHO1 CKIP-1|OC120 pleckstrin homology domain containing, family O member 1 protein-coding Atac153_MAPQ30_peak_1603 chr12 104195908 104195908 + 4.57314 NA intron (NM_001031701, intron 4 of 13) intron (NM_001031701, intron 4 of 13) 39067 NM_001031701 51559 Hs.48428 NM_016575 HPRD:18241 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding Atac153_MAPQ30_peak_2938 chr17 74768826 74768826 + 4.57314 NA intron (NM_001242536, intron 9 of 11) AluSg|SINE|Alu -26300 NR_110837 101928514 Hs.617206 NR_110837 LOC101928514 - uncharacterized LOC101928514 ncRNA Atac153_MAPQ30_peak_5147 chr4 129492615 129492615 + 4.57314 NA Intergenic AluJb|SINE|Alu -238163 NM_199320 79960 Hs.12420 NM_024900 HPRD:10151 JADE1 PHF17 jade family PHD finger 1 protein-coding Atac153_MAPQ30_peak_4469 chr22 44697643 44697643 + 4.57314 NA intron (NM_001099294, intron 1 of 4) L1MB3|LINE|L1 11088 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 KIAA1644 - KIAA1644 protein-coding Atac153_MAPQ30_peak_3787 chr2 169261481 169261481 + 4.57314 NA Intergenic Intergenic -51278 NM_203463 253782 Hs.506829 NM_203463 HPRD:17258 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding Atac153_MAPQ30_peak_503 chr1 205318473 205318473 + 4.57314 NA intron (NM_001271863, intron 2 of 8) intron (NM_001271863, intron 2 of 8) 7655 NM_018203 55220 Hs.10414 NM_018203 HPRD:07696 KLHDC8A - kelch domain containing 8A protein-coding Atac153_MAPQ30_peak_7056 chrX 58310756 58310756 + 4.57314 NA Intergenic GSATX|Satellite|centr -373689 NM_007156 7789 Hs.550094 NM_007156 HPRD:02210 ZXDA ZNF896 zinc finger, X-linked, duplicated A protein-coding Atac153_MAPQ30_peak_5633 chr6 31474162 31474162 + 4.57314 NA exon (NM_001289160, exon 3 of 6) exon (NM_001289160, exon 3 of 6) 8335 NM_005931 4277 Hs.731446 NM_005931 HPRD:03894 MICB PERB11.2 MHC class I polypeptide-related sequence B protein-coding Atac153_MAPQ30_peak_3625 chr2 96053268 96053268 + 4.57314 NA Intergenic MLT1G3|LTR|ERVL-MaLR -15180 NM_016044 51011 Hs.531247 NM_016044 HPRD:13287 FAHD2A - fumarylacetoacetate hydrolase domain containing 2A protein-coding Atac153_MAPQ30_peak_5608 chr6 18907296 18907296 + 4.57314 NA Intergenic Intergenic 273415 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA Atac153_MAPQ30_peak_793 chr10 72939243 72939243 + 4.57314 NA Intergenic Intergenic -33049 NM_001244889 219699 Hs.522997 NM_170744 HPRD:08487 UNC5B UNC5H2|p53RDL1 unc-5 homolog B (C. elegans) protein-coding Atac153_MAPQ30_peak_5090 chr4 57258570 57258570 + 4.57314 NA TTS (NM_002703) TTS (NM_002703) -4896 NM_181806 132949 Hs.104347 NM_181806 HPRD:12398 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding Atac153_MAPQ30_peak_4941 chr3 188652025 188652025 + 4.57314 NA Intergenic L2a|LINE|L2 13403 NR_046873 100874043 Hs.616287 NR_046873 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6022 chr7 55613884 55613884 + 4.57314 NA intron (NM_030796, intron 1 of 4) L2b|LINE|L2 6582 NM_001284282 81552 Hs.488307 NM_030796 HPRD:08526 VOPP1 ECOP|GASP vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding Atac153_MAPQ30_peak_554 chr1 226900591 226900591 + 4.57314 NA intron (NM_002221, intron 2 of 7) intron (NM_002221, intron 2 of 7) 26285 NM_002221 3707 Hs.528087 NM_002221 HPRD:00942 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding Atac153_MAPQ30_peak_4501 chr22 47794517 47794517 + 4.57314 NA Intergenic MLT1E2|LTR|ERVL-MaLR 88343 NR_109967 101927722 Hs.589927 NR_109967 ENSG00000218357 LOC101927722 - uncharacterized LOC101927722 ncRNA Atac153_MAPQ30_peak_2051 chr14 97538330 97538330 + 4.57314 NA Intergenic MLT1C|LTR|ERVL-MaLR 128414 NR_104113 145249 NR_104113 LINC00618 C14orf63 long intergenic non-protein coding RNA 618 ncRNA Atac153_MAPQ30_peak_6043 chr7 68135240 68135240 + 4.57314 NA Intergenic L2a|LINE|L2 650000 NR_120514 102723427 Hs.583491 NR_120514 LOC102723427 - uncharacterized LOC102723427 ncRNA Atac153_MAPQ30_peak_1364 chr11 123418780 123418780 + 4.57314 NA intron (NM_001286563, intron 1 of 20) intron (NM_001286563, intron 1 of 20) -12190 NM_001286564 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B - GRAM domain containing 1B protein-coding Atac153_MAPQ30_peak_6246 chr8 1792770 1792770 + 4.57314 NA intron (NM_014629, intron 2 of 28) intron (NM_014629, intron 2 of 28) 20621 NM_014629 9639 Hs.98594 NM_014629 HPRD:09735 ARHGEF10 GEF10 Rho guanine nucleotide exchange factor (GEF) 10 protein-coding Atac153_MAPQ30_peak_5593 chr6 11763901 11763901 + 4.57314 NA intron (NM_032744, intron 3 of 5) intron (NM_032744, intron 3 of 5) 15379 NM_001143948 84830 Hs.126409 NM_032744 HPRD:12836 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen-dependent TFPI-regulating protein protein-coding Atac153_MAPQ30_peak_6558 chr8 144182803 144182803 + 4.57314 NA Intergenic L1ME1|LINE|L1 58654 NM_002347 4062 Hs.159590 NM_002347 HPRD:04691 LY6H NMLY6 lymphocyte antigen 6 complex, locus H protein-coding Atac153_MAPQ30_peak_6943 chrX 20047227 20047227 + 4.57314 NA intron (NM_001168467, intron 7 of 15) LTR79|LTR|ERVL -11922 NR_037414 100500809 NR_037414 MIR23C hsa-mir-23c microRNA 23c ncRNA Atac153_MAPQ30_peak_3586 chr2 75425995 75425995 + 4.57314 NA exon (NM_001058, exon 1 of 5) exon (NM_001058, exon 1 of 5) 650 NM_015727 6869 Hs.633301 NM_001058 HPRD:01208 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding Atac153_MAPQ30_peak_3236 chr19 15368034 15368034 + 4.57314 NA intron (NM_014299, intron 7 of 11) intron (NM_014299, intron 7 of 11) 23228 NM_014299 23476 Hs.187763 NM_014299 HPRD:10574 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding Atac153_MAPQ30_peak_3269 chr19 30945173 30945173 + 4.57314 NA intron (NM_014717, intron 2 of 4) intron (NM_014717, intron 2 of 4) 81845 NM_014717 9745 Hs.378901 NM_014717 HPRD:15825 ZNF536 - zinc finger protein 536 protein-coding Atac153_MAPQ30_peak_4965 chr4 2572780 2572780 + 4.57314 NA Intergenic Intergenic -54379 NM_001256667 8603 Hs.652364 NM_003704 HPRD:09850 FAM193A C4orf8 family with sequence similarity 193, member A protein-coding Atac153_MAPQ30_peak_5241 chr5 6502641 6502641 + 4.57314 NA Intergenic Intergenic 53905 NM_001145161 134111 Hs.126856 NM_001145161 UBE2QL1 - ubiquitin-conjugating enzyme E2Q family-like 1 protein-coding Atac153_MAPQ30_peak_2122 chr15 29758345 29758345 + 4.57314 NA intron (NM_015307, intron 1 of 10) intron (NM_015307, intron 1 of 10) 104582 NM_015307 23359 Hs.383564 NM_015307 ENSG00000104059 FAM189A1 TMEM228 family with sequence similarity 189, member A1 protein-coding Atac153_MAPQ30_peak_1374 chr11 126287342 126287342 + 4.57314 NA Intergenic MIRc|SINE|MIR 11265 NM_001254759 6484 Hs.591947 NM_006278 HPRD:00084 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding Atac153_MAPQ30_peak_3448 chr2 20886533 20886533 + 4.57314 NA non-coding (NR_104233, exon 5 of 5) non-coding (NR_104233, exon 5 of 5) 20109 NM_182828 151449 Hs.447688 NM_182828 GDF7 BMP12 growth differentiation factor 7 protein-coding Atac153_MAPQ30_peak_3005 chr18 8425820 8425820 + 4.57314 NA Intergenic Intergenic -58788 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA Atac153_MAPQ30_peak_1075 chr11 8951304 8951304 + 4.57314 NA intron (NM_020643, intron 2 of 6) intron (NM_020643, intron 2 of 6) 3249 NM_020643 56673 Hs.277349 NM_020643 HPRD:12604 C11orf16 - chromosome 11 open reading frame 16 protein-coding Atac153_MAPQ30_peak_6307 chr8 21317408 21317408 + 4.57314 NA Intergenic LTR16A|LTR|ERVL 161658 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA Atac153_MAPQ30_peak_42 chr1 6631950 6631950 + 4.57314 NA intron (NM_177540, intron 2 of 4) intron (NM_177540, intron 2 of 4) -8101 NM_001278648 3104 Hs.502330 NM_005341 HPRD:01316 ZBTB48 HKR3|ZNF855|pp9964 zinc finger and BTB domain containing 48 protein-coding Atac153_MAPQ30_peak_3651 chr2 105812048 105812048 + 4.57314 NA Intergenic Intergenic -46152 NM_007227 11250 Hs.590903 NM_007227 HPRD:05325 GPR45 PSP24|PSP24(ALPHA)|PSP24A G protein-coupled receptor 45 protein-coding Atac153_MAPQ30_peak_5772 chr6 122683624 122683624 + 4.57314 NA Intergenic HERVL18-int|LTR|ERVL -37072 NM_001135564 3298 Hs.158195 NM_004506 HPRD:00779 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding Atac153_MAPQ30_peak_773 chr10 64872731 64872731 + 4.57314 NA Intergenic Intergenic -20276 NM_001282405 29982 Hs.449628 NM_030759 HPRD:11401 NRBF2 COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding Atac153_MAPQ30_peak_1501 chr12 46038218 46038218 + 4.57314 NA Intergenic MER5A1|DNA|hAT-Charlie 83486 NR_028408 400027 Hs.597122 NR_028408 ENSG00000273015 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA Atac153_MAPQ30_peak_947 chr10 124720632 124720632 + 4.57314 NA Intergenic Intergenic -6713 NM_024942 80007 Hs.501286 NM_024942 HPRD:18531 C10orf88 - chromosome 10 open reading frame 88 protein-coding Atac153_MAPQ30_peak_6226 chr7 157686465 157686465 + 4.57314 NA intron (NM_130842, intron 11 of 21) L2a|LINE|L2 39188 NR_038966 100506585 Hs.661265 NR_038966 ENSG00000233038 LOC100506585 - uncharacterized LOC100506585 ncRNA Atac153_MAPQ30_peak_2481 chr16 33950200 33950200 + 4.57314 NA Intergenic Intergenic 12303 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA Atac153_MAPQ30_peak_128 chr1 20997144 20997144 + 4.57314 NA intron (NM_001287212, intron 12 of 14) intron (NM_001287212, intron 12 of 14) -9107 NM_005216 1650 Hs.523145 NM_005216 HPRD:03728 DDOST AGER1|CDG1R|OKSWcl45|OST|OST48|WBP1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) protein-coding Atac153_MAPQ30_peak_5157 chr4 146118391 146118391 + 4.57314 NA Intergenic LTR50|LTR|ERVL -17559 NM_001102653 54726 Hs.270851 NM_017493 HPRD:11033 OTUD4 DUBA6|HIN1|HSHIN1 OTU deubiquitinase 4 protein-coding Atac153_MAPQ30_peak_6851 chr9 137880857 137880857 + 4.57314 NA Intergenic MSTA|LTR|ERVL-MaLR -71051 NM_002003 2219 Hs.440898 NM_002003 HPRD:03153 FCN1 FCNM ficolin (collagen/fibrinogen domain containing) 1 protein-coding Atac153_MAPQ30_peak_4421 chr22 35711102 35711102 + 4.57314 NA intron (NR_024194, intron 1 of 14) L2|LINE|L2 15305 NR_024195 10043 Hs.474705 NM_005488 HPRD:05265 TOM1 - target of myb1 (chicken) protein-coding Atac153_MAPQ30_peak_5076 chr4 53691739 53691739 + 4.57314 NA Intergenic Intergenic 35578 NR_040106 152578 Hs.383806 NR_040106 ENSG00000250302 LOC152578 - uncharacterized LOC152578 ncRNA Atac153_MAPQ30_peak_5026 chr4 10348376 10348376 + 4.57314 NA Intergenic Intergenic 110656 NM_053042 85460 Hs.455089 NM_053042 HPRD:13889 ZNF518B - zinc finger protein 518B protein-coding Atac153_MAPQ30_peak_4576 chr3 13831853 13831853 + 4.57314 NA Intergenic Intergenic 89765 NM_004625 7476 Hs.72290 NM_004625 WNT7A - wingless-type MMTV integration site family, member 7A protein-coding Atac153_MAPQ30_peak_6383 chr8 55384621 55384621 + 4.57314 NA Intergenic Intergenic 14126 NM_022454 64321 Hs.98367 NM_022454 HPRD:18085 SOX17 VUR3 SRY (sex determining region Y)-box 17 protein-coding Atac153_MAPQ30_peak_4651 chr3 41726593 41726593 + 4.57314 NA intron (NM_017886, intron 27 of 36) HERV35I-int|LTR|ERV1 277067 NM_017886 54986 Hs.656192 NM_017886 HPRD:07928 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding Atac153_MAPQ30_peak_4879 chr3 139780062 139780062 + 4.57314 NA intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 126035 NM_022131 64084 Hs.158529 NM_022131 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding Atac153_MAPQ30_peak_5694 chr6 44049264 44049264 + 4.57314 NA Intergenic Intergenic 45927 NM_032111 64928 Hs.311190 NM_032111 HPRD:14741 MRPL14 L14mt|L32mt|MRP-L14|MRP-L32|MRPL32|RMPL32|RPML32 mitochondrial ribosomal protein L14 protein-coding Atac153_MAPQ30_peak_2131 chr15 39643164 39643164 + 4.57314 NA Intergenic Intergenic 100279 NM_207445 400360 Hs.376109 NM_207445 HPRD:13437 C15orf54 - chromosome 15 open reading frame 54 protein-coding Atac153_MAPQ30_peak_5713 chr6 64340707 64340707 + 4.57314 NA Intergenic Intergenic -5000 NM_001290259 23469 Hs.348921 NM_015153 HPRD:08477 PHF3 - PHD finger protein 3 protein-coding Atac153_MAPQ30_peak_3333 chr19 49178577 49178577 + 4.57314 NA intron (NR_004401, intron 4 of 4) MER46C|DNA|TcMar-Tigger -2313 NM_145807 126147 Hs.326217 NM_145807 HPRD:14031 NTN5 - netrin 5 protein-coding Atac153_MAPQ30_peak_3488 chr2 31215847 31215847 + 4.57314 NA exon (NM_001253827, exon 4 of 17) exon (NM_001253827, exon 4 of 17) 136659 NM_001253827 79623 Hs.468058 NM_024572 HPRD:12194 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding Atac153_MAPQ30_peak_6390 chr8 58127731 58127731 + 4.57314 NA Intergenic Intergenic -3104 NR_038235 100507651 Hs.371831 NR_038235 ENSG00000253301 LOC100507651 - uncharacterized LOC100507651 ncRNA Atac153_MAPQ30_peak_3100 chr18 47470724 47470724 + 4.57314 NA intron (NM_001080467, intron 14 of 39) intron (NM_001080467, intron 14 of 39) 130331 NR_117096 103091864 Hs.646459 NR_117096 SNHG22 SCARNA17HG small nucleolar RNA host gene 22 (non-protein coding) ncRNA Atac153_MAPQ30_peak_176 chr1 33083608 33083608 + 4.57314 NA Intergenic Intergenic 32577 NM_178547 339487 Hs.655921 NM_178547 ZBTB8OS ARCH|ARCH2 zinc finger and BTB domain containing 8 opposite strand protein-coding Atac153_MAPQ30_peak_6207 chr7 153338336 153338336 + 4.57314 NA Intergenic MLT2B4|LTR|ERVL -229017 NR_125776 103724390 Hs.614280 NR_125776 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA Atac153_MAPQ30_peak_4271 chr21 38971694 38971694 + 4.57314 NA Intergenic Tigger2b_Pri|DNA|TcMar-Tigger 179092 NM_001396 1859 Hs.368240 NM_001396 HPRD:09018 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A protein-coding Atac153_MAPQ30_peak_1300 chr11 97619601 97619601 + 4.57314 NA Intergenic MLT1J-int|LTR|ERVL-MaLR -128706 NR_107016 102465857 NR_107016 MIR7976 hsa-mir-7976 microRNA 7976 ncRNA Atac153_MAPQ30_peak_3112 chr18 54309063 54309063 + 4.57314 NA Intergenic Intergenic -3143 NR_024546 9352 Hs.114412 NM_004786 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin-like 1 protein-coding Atac153_MAPQ30_peak_6344 chr8 38279367 38279367 + 4.57314 NA exon (NM_001174065, exon 8 of 18) exon (NM_001174065, exon 8 of 18) 34718 NM_001199660 137994 Hs.696457 NM_144652 HPRD:08060 LETM2 - leucine zipper-EF-hand containing transmembrane protein 2 protein-coding Atac153_MAPQ30_peak_4821 chr3 126865988 126865988 + 4.57314 NA Intergenic MIRb|SINE|MIR -45986 NM_001007534 285311 Hs.591284 NM_001007534 HPRD:16949 C3orf56 - chromosome 3 open reading frame 56 protein-coding Atac153_MAPQ30_peak_6124 chr7 128045172 128045172 + 4.57314 NA intron (NM_001142576, intron 3 of 15) intron (NM_001142576, intron 3 of 15) 852 NM_001142574 3614 Hs.654401 NM_000883 HPRD:08853 IMPDH1 IMPD|IMPD1|LCA11|RP10|sWSS2608 IMP (inosine 5'-monophosphate) dehydrogenase 1 protein-coding Atac153_MAPQ30_peak_787 chr10 72294841 72294841 + 4.57314 NA intron (NM_014431, intron 10 of 19) intron (NM_014431, intron 10 of 19) 56277 NM_014431 27143 Hs.202351 NM_014431 HPRD:11419 PALD1 KIAA1274|PALD phosphatase domain containing, paladin 1 protein-coding Atac153_MAPQ30_peak_3508 chr2 41250305 41250305 + 4.57314 NA Intergenic Tigger2|DNA|TcMar-Tigger -510730 NM_001112802 6546 Hs.31961 NM_021097 HPRD:01659 SLC8A1 NCX1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein-coding Atac153_MAPQ30_peak_618 chr1 245700173 245700173 + 4.57314 NA intron (NM_018012, intron 4 of 14) MLT1G3|LTR|ERVL-MaLR 381886 NM_018012 55083 Hs.368096 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding Atac153_MAPQ30_peak_330 chr1 112780167 112780167 + 4.57314 NA Intergenic AluJb|SINE|Alu -158633 NM_018704 55917 Hs.744100 NM_018704 HPRD:10906 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding Atac153_MAPQ30_peak_6620 chr9 36896086 36896086 + 4.57314 NA intron (NR_103999, intron 6 of 8) intron (NR_103999, intron 6 of 8) -2558 NR_039687 100616456 NR_039687 MIR4476 - microRNA 4476 ncRNA Atac153_MAPQ30_peak_1497 chr12 42154970 42154970 + 4.57314 NA Intergenic Intergenic 323429 NM_013377 29951 Hs.380044 NM_013377 HPRD:15116 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding Atac153_MAPQ30_peak_1687 chr12 123625781 123625781 + 4.57314 NA Intergenic MIRc|SINE|MIR -30745 NM_001300801 57605 Hs.272759 NM_020845 HPRD:08335 PITPNM2 NIR-3|NIR3|RDGB2|RDGBA2 phosphatidylinositol transfer protein, membrane-associated 2 protein-coding Atac153_MAPQ30_peak_5416 chr5 136467959 136467959 + 4.57314 NA intron (NM_004598, intron 4 of 10) intron (NM_004598, intron 4 of 10) 367059 NM_004598 6695 Hs.596136 NM_004598 HPRD:11887 SPOCK1 SPOCK|TESTICAN|TIC1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 protein-coding Atac153_MAPQ30_peak_2744 chr17 19206568 19206568 + 4.57314 NA intron (NR_048576, intron 2 of 2) L1MC4|LINE|L1 3006 NR_048576 100874018 Hs.621672 NR_048576 ENSG00000235397 EPN2-AS1 - EPN2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6191 chr7 150619235 150619235 + 4.57314 NA Intergenic Intergenic 33682 NM_001204798 3757 Hs.647099 NM_000238 HPRD:01069 KCNH2 ERG1|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel, subfamily H (eag-related), member 2 protein-coding Atac153_MAPQ30_peak_1114 chr11 18796066 18796066 + 4.57314 NA intron (NM_001039970, intron 1 of 14) intron (NM_001039970, intron 1 of 14) 17323 NM_001278238 84867 Hs.79092 NM_006906 HPRD:01472 PTPN5 PTPSTEP|STEP protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) protein-coding Atac153_MAPQ30_peak_5148 chr4 130310590 130310590 + 4.57314 NA Intergenic L2c|LINE|L2 293308 NM_001099783 132321 Hs.567679 NM_173487 HPRD:14049 C4orf33 - chromosome 4 open reading frame 33 protein-coding Atac153_MAPQ30_peak_4145 chr20 48288927 48288927 + 4.57314 NA intron (NM_004776, intron 1 of 8) intron (NM_004776, intron 1 of 8) 41494 NM_004776 9334 Hs.370487 NM_004776 HPRD:06807 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 protein-coding Atac153_MAPQ30_peak_201 chr1 37238428 37238428 + 4.57314 NA Intergenic MER33|DNA|hAT-Charlie 261416 NM_000831 2899 Hs.128848 NM_000831 HPRD:00691 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate receptor, ionotropic, kainate 3 protein-coding Atac153_MAPQ30_peak_1150 chr11 37000808 37000808 + 4.57314 NA Intergenic MSTA-int|LTR|ERVL-MaLR -380979 NM_001243786 5897 Hs.714519 NM_000536 HPRD:08913 RAG2 RAG-2 recombination activating gene 2 protein-coding Atac153_MAPQ30_peak_5693 chr6 44032154 44032154 + 4.57314 NA Intergenic MIR3|SINE|MIR 63037 NM_032111 64928 Hs.311190 NM_032111 HPRD:14741 MRPL14 L14mt|L32mt|MRP-L14|MRP-L32|MRPL32|RMPL32|RPML32 mitochondrial ribosomal protein L14 protein-coding Atac153_MAPQ30_peak_98 chr1 17017662 17017662 + 4.57314 NA TTS (NR_026567) TTS (NR_026567) 9912 NR_037446 100500876 NR_037446 miRBase:MI0016076 MIR3675 - microRNA 3675 ncRNA Atac153_MAPQ30_peak_939 chr10 123229844 123229844 + 4.57314 NA Intergenic Intergenic 123637 NM_001144913 2263 Hs.533683 NM_000141 HPRD:01492 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding Atac153_MAPQ30_peak_3788 chr2 169646922 169646922 + 4.57314 NA intron (NM_001171631, intron 2 of 20) L1MC4|LINE|L1 3873 NM_001171631 115677 Hs.189780 NM_052946 HPRD:06324 NOSTRIN DaIP2 nitric oxide synthase trafficking protein-coding Atac153_MAPQ30_peak_5828 chr6 159643064 159643064 + 4.57314 NA intron (NM_032532, intron 6 of 22) intron (NM_032532, intron 6 of 22) -52025 NR_121668 101929122 Hs.134215 NR_121668 LOC101929122 - uncharacterized LOC101929122 ncRNA Atac153_MAPQ30_peak_6411 chr8 82754660 82754660 + 4.57314 NA promoter-TSS (NM_152837) promoter-TSS (NM_152837) -139 NM_022133 64089 Hs.492121 NM_022133 HPRD:15411 SNX16 - sorting nexin 16 protein-coding Atac153_MAPQ30_peak_1727 chr12 130093079 130093079 + 4.57314 NA intron (NM_133448, intron 2 of 8) intron (NM_133448, intron 2 of 8) 295133 NM_133448 121256 Hs.507268 NM_133448 HPRD:13906 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding Atac153_MAPQ30_peak_2807 chr17 34832592 34832592 + 4.57314 NA Intergenic Intergenic -9879 NR_104010 9326 Hs.2210 NM_004773 HPRD:05139 ZNHIT3 TRIP3 zinc finger, HIT-type containing 3 protein-coding Atac153_MAPQ30_peak_2293 chr15 86313410 86313410 + 4.57314 NA TTS (NR_031682) TTS (NR_031682) 399 NR_031682 100302121 NR_031682 miRBase:MI0006416 MIR1276 MIRN1276|hsa-mir-1276 microRNA 1276 ncRNA Atac153_MAPQ30_peak_3202 chr19 5417641 5417641 + 4.57314 NA Intergenic Intergenic -37785 NM_181710 148066 Hs.126496 NM_181710 HPRD:15895 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding Atac153_MAPQ30_peak_5923 chr7 23247256 23247256 + 4.57314 NA Intergenic Intergenic 25810 NM_007342 11097 Hs.408241 NM_007342 HPRD:14855 NUPL2 CG1|NLP-1|NLP_1|hCG1 nucleoporin like 2 protein-coding Atac153_MAPQ30_peak_3970 chr20 1693430 1693430 + 4.57314 NA Intergenic L1PBa|LINE|L1 -55005 NM_001039508 55423 Hs.590883 NM_018556 ENSG00000089012 SIRPG CD172g|SIRP-B2|SIRPB2|SIRPgamma|bA77C3.1 signal-regulatory protein gamma protein-coding Atac153_MAPQ30_peak_1767 chr13 24321287 24321287 + 4.57314 NA intron (NM_005932, intron 18 of 18) intron (NM_005932, intron 18 of 18) -141741 NM_001014442 542767 Hs.642624 NM_001014442 C1QTNF9B-AS1 PCOTH C1QTNF9B antisense RNA 1 protein-coding Atac153_MAPQ30_peak_1423 chr12 1681835 1681835 + 4.57314 NA intron (NM_152441, intron 1 of 1) L2a|LINE|L2 21496 NM_152441 144699 Hs.367956 NM_152441 HPRD:10949 FBXL14 Fbl14 F-box and leucine-rich repeat protein 14 protein-coding Atac153_MAPQ30_peak_5330 chr5 72045402 72045402 + 4.57314 NA Intergenic MER1B|DNA|hAT-Charlie -67016 NM_002270 3842 Hs.482497 NM_002270 HPRD:04210 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding Atac153_MAPQ30_peak_5892 chr7 2248509 2248509 + 4.57314 NA intron (NM_001013836, intron 10 of 18) intron (NM_001013836, intron 10 of 18) 24074 NM_003550 8379 Hs.654838 NM_003550 HPRD:04065 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 MAD1 mitotic arrest deficient-like 1 (yeast) protein-coding Atac153_MAPQ30_peak_398 chr1 157282834 157282834 + 4.57314 NA Intergenic L1M4c|LINE|L1 -174451 NM_001145312 2117 Hs.105636 NM_005240 HPRD:01282 ETV3 METS|PE-1|PE1|bA110J1.4 ets variant 3 protein-coding Atac153_MAPQ30_peak_2474 chr16 29991170 29991170 + 4.57314 NA intron (NM_016151, intron 8 of 15) L2b|LINE|L2 5982 NM_016151 9344 Hs.291623 NM_004783 HPRD:18147 TAOK2 MAP3K17|PSK|PSK1|PSK1-BETA|TAO1|TAO2 TAO kinase 2 protein-coding Atac153_MAPQ30_peak_5869 chr6 169593748 169593748 + 4.57314 NA Intergenic Intergenic 60461 NM_003247 7058 Hs.371147 NM_003247 HPRD:01766 THBS2 TSP2 thrombospondin 2 protein-coding Atac153_MAPQ30_peak_6760 chr9 116460109 116460109 + 4.57314 NA Intergenic LTR16C|LTR|ERVL 103675 NM_001276262 5998 Hs.494875 NM_017790 HPRD:03720 RGS3 C2PA|RGP3 regulator of G-protein signaling 3 protein-coding Atac153_MAPQ30_peak_1874 chr13 112132203 112132203 + 4.57314 NA Intergenic Intergenic 159188 NM_152324 121793 Hs.210677 NM_152324 HPRD:14603 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding Atac153_MAPQ30_peak_3318 chr19 45214346 45214346 + 4.57314 NA TTS (NM_001039213) TTS (NM_001039213) 11925 NM_001039213 388551 Hs.456381 NM_001039213 ENSG00000213892 CEACAM16 CEAL2|DFNA4B carcinoembryonic antigen-related cell adhesion molecule 16 protein-coding Atac153_MAPQ30_peak_3189 chr19 2787240 2787240 + 4.57314 NA intron (NM_003249, intron 1 of 12) intron (NM_003249, intron 1 of 12) 1734 NM_003249 7064 Hs.78769 NM_003249 HPRD:03072 THOP1 EP24.15|MEPD_HUMAN|MP78|TOP thimet oligopeptidase 1 protein-coding Atac153_MAPQ30_peak_1791 chr13 34084353 34084353 + 4.57314 NA intron (NM_001243476, intron 4 of 17) MLT1K-int|LTR|ERVL-MaLR 166619 NM_001243476 90627 Hs.156551 NM_052851 HPRD:11607 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR-related lipid transfer (START) domain containing 13 protein-coding Atac153_MAPQ30_peak_2181 chr15 59888128 59888128 + 4.57314 NA Intergenic Intergenic -15854 NM_004751 9245 Hs.194710 NM_004751 HPRD:06018 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding Atac153_MAPQ30_peak_5858 chr6 168178377 168178377 + 4.57314 NA Intergenic Intergenic 19162 NR_026773 26238 Hs.520583 NM_014356 HPRD:12846 C6orf123 HGC6.2|dJ431P23.4 chromosome 6 open reading frame 123 ncRNA Atac153_MAPQ30_peak_3920 chr2 236320910 236320910 + 4.57314 NA Intergenic Intergenic -81823 NM_001037131 116987 Hs.435039 NM_014914 HPRD:16359 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding Atac153_MAPQ30_peak_930 chr10 120701139 120701139 + 4.57314 NA Intergenic Intergenic -88089 NM_199461 340719 Hs.591918 NM_199461 HPRD:16302 NANOS1 NOS1|SPGF12 nanos homolog 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_1751 chr12 133372820 133372820 + 4.57314 NA intron (NM_005895, intron 10 of 23) intron (NM_005895, intron 10 of 23) 32468 NM_005895 2802 Hs.507333 NM_005895 HPRD:03990 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding Atac153_MAPQ30_peak_3490 chr2 31464983 31464983 + 4.57314 NA intron (NM_014600, intron 1 of 5) intron (NM_014600, intron 1 of 5) 8103 NM_014600 30845 Hs.368808 NM_014600 EHD3 PAST3 EH-domain containing 3 protein-coding Atac153_MAPQ30_peak_494 chr1 204419295 204419295 + 4.57314 NA intron (NM_002646, intron 13 of 33) intron (NM_002646, intron 13 of 33) -38350 NM_032833 84919 Hs.304376 NM_032833 HPRD:17892 PPP1R15B CREP protein phosphatase 1, regulatory subunit 15B protein-coding Atac153_MAPQ30_peak_7265 chrX 148084869 148084869 + 4.57314 NA Intergenic Intergenic 284254 NM_001170628 2334 Hs.496911 NM_002025 HPRD:02397 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family, member 2 protein-coding Atac153_MAPQ30_peak_4877 chr3 139673134 139673134 + 4.57314 NA intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 19107 NM_022131 64084 Hs.158529 NM_022131 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding Atac153_MAPQ30_peak_1178 chr11 45948088 45948088 + 4.57314 NA exon (NM_001300721, exon 9 of 14) exon (NM_001300721, exon 9 of 14) 3861 NM_001300721 120071 Hs.86543 NM_152312 HPRD:13618 GYLTL1B LARGE2 glycosyltransferase-like 1B protein-coding Atac153_MAPQ30_peak_3227 chr19 13367919 13367919 + 4.57314 NA intron (NM_001174080, intron 28 of 46) MLT1I|LTR|ERVL-MaLR 106637 NM_004907 9592 Hs.501629 NM_004907 HPRD:09997 IER2 ETR101 immediate early response 2 protein-coding Atac153_MAPQ30_peak_1318 chr11 113118416 113118416 + 4.57314 NA intron (NM_001076682, intron 17 of 19) intron (NM_001076682, intron 17 of 19) 26207 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA Atac153_MAPQ30_peak_103 chr1 17410583 17410583 + 4.57314 NA intron (NM_007365, intron 8 of 15) intron (NM_007365, intron 8 of 15) -29918 NM_003000 6390 Hs.465924 NM_003000 HPRD:01707 SDHB CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP succinate dehydrogenase complex, subunit B, iron sulfur (Ip) protein-coding Atac153_MAPQ30_peak_246 chr1 46740968 46740968 + 4.57314 NA intron (NM_001142548, intron 17 of 18) intron (NM_001142548, intron 17 of 18) 27601 NM_003579 8438 Hs.642042 NM_003579 HPRD:04683 RAD54L HR54|RAD54A|hHR54|hRAD54 RAD54-like (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_3004 chr18 8327377 8327377 + 4.57314 NA intron (NM_001105244, intron 22 of 32) intron (NM_001105244, intron 22 of 32) 39655 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA Atac153_MAPQ30_peak_6 chr1 1245930 1245930 + 4.57314 NA intron (NM_153339, intron 5 of 7) intron (NM_153339, intron 5 of 7) 1936 NM_153339 126789 Hs.400659 NM_153339 HPRD:08301 PUSL1 - pseudouridylate synthase-like 1 protein-coding Atac153_MAPQ30_peak_7289 chrX 153238540 153238540 + 4.57314 NA intron (NM_003492, intron 1 of 1) intron (NM_003492, intron 1 of 1) 549 NM_003492 8269 Hs.23119 NM_003492 HPRD:02086 TMEM187 CXorf12|DXS9878E|ITBA1 transmembrane protein 187 protein-coding Atac153_MAPQ30_peak_3461 chr2 25921831 25921831 + 4.57314 NA Intergenic Intergenic -25315 NM_033148 1838 Hs.307720 NM_021907 HPRD:09091 DTNB - dystrobrevin, beta protein-coding Atac153_MAPQ30_peak_6159 chr7 135003786 135003786 + 4.57314 NA Intergenic AluSz|SINE|Alu 87055 NM_182489 346673 Hs.592279 NM_182489 HPRD:18123 STRA8 - stimulated by retinoic acid 8 protein-coding Atac153_MAPQ30_peak_143 chr1 23760071 23760071 + 4.57314 NA intron (NM_017707, intron 20 of 24) intron (NM_017707, intron 20 of 24) -8810 NM_003196 6920 Hs.446354 NM_003196 HPRD:16036 TCEA3 TFIIS|TFIIS.H transcription elongation factor A (SII), 3 protein-coding Atac153_MAPQ30_peak_3939 chr2 239066546 239066546 + 4.57314 NA Intergenic Intergenic -1103 NM_001291832 151176 Hs.24951 NM_152521 FAM132B C1QTNF15|CTRP15 family with sequence similarity 132, member B protein-coding Atac153_MAPQ30_peak_4139 chr20 47181328 47181328 + 4.57314 NA Intergenic MLT1L|LTR|ERVL-MaLR 192674 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA Atac153_MAPQ30_peak_566 chr1 228928198 228928198 + 4.57314 NA Intergenic L2c|LINE|L2 57374 NM_021205 58480 Hs.647774 NM_021205 HPRD:06965 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding Atac153_MAPQ30_peak_7162 chrX 109939063 109939063 + 4.57314 NA intron (NM_001143981, intron 7 of 11) intron (NM_001143981, intron 7 of 11) 100013 NM_145234 91851 Hs.496587 NM_145234 HPRD:02285 CHRDL1 CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1 chordin-like 1 protein-coding Atac153_MAPQ30_peak_1104 chr11 15919373 15919373 + 4.57314 NA Intergenic MLT1F2|LTR|ERVL-MaLR 71794 NR_106721 102464826 NR_106721 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA Atac153_MAPQ30_peak_6098 chr7 105282834 105282834 + 4.57314 NA intron (NM_138495, intron 3 of 9) intron (NM_138495, intron 3 of 9) 36775 NM_138495 222255 Hs.745056 NM_020725 HPRD:12508 ATXN7L1 ATXN7L4 ataxin 7-like 1 protein-coding Atac153_MAPQ30_peak_5198 chr4 185594913 185594913 + 4.57314 NA intron (NM_001300767, intron 6 of 12) intron (NM_001300767, intron 6 of 12) 24146 NM_001300768 201973 Hs.481307 NM_152683 HPRD:08742 PRIMPOL CCDC111|MYP22 primase and polymerase (DNA-directed) protein-coding Atac153_MAPQ30_peak_588 chr1 232494980 232494980 + 4.57314 NA Intergenic L2a|LINE|L2 156263 NM_020808 57568 Hs.745009 NM_020808 HPRD:15346 SIPA1L2 SPAL2 signal-induced proliferation-associated 1 like 2 protein-coding Atac153_MAPQ30_peak_395 chr1 156915992 156915992 + 4.57314 NA intron (NM_198236, intron 28 of 40) intron (NM_198236, intron 28 of 40) -9956 NR_030527 768220 NR_030527 MIR765 MIRN765|hsa-mir-765 microRNA 765 ncRNA Atac153_MAPQ30_peak_1777 chr13 27589010 27589010 + 4.57314 NA Intergenic Intergenic -110660 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4949 chr3 196766289 196766289 + 4.57314 NA Intergenic L1ME1|LINE|L1 -9602 NM_005929 4241 Hs.184727 NM_005929 HPRD:01122 MFI2 CD228|MAP97|MTF1 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 protein-coding Atac153_MAPQ30_peak_133 chr1 21980737 21980737 + 4.57314 NA intron (NM_002885, intron 1 of 24) intron (NM_002885, intron 1 of 24) -2389 NM_001145658 5909 Hs.148178 NM_002885 HPRD:02609 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding Atac153_MAPQ30_peak_3791 chr2 171103499 171103499 + 4.57314 NA intron (NR_045684, intron 7 of 34) intron (NR_045684, intron 7 of 34) 68844 NR_045683 140469 Hs.671900 NM_138995 HPRD:17623 MYO3B - myosin IIIB protein-coding Atac153_MAPQ30_peak_2994 chr18 7020353 7020353 + 4.57314 NA intron (NM_005559, intron 19 of 62) intron (NM_005559, intron 19 of 62) -90485 NR_034100 400643 Hs.253920 NM_001103383 ENSG00000265933 LINC00668 - long intergenic non-protein coding RNA 668 ncRNA Atac153_MAPQ30_peak_7028 chrX 49627329 49627329 + 4.57314 NA Intergenic Intergenic 16630 NR_026742 158572 Hs.408191 NM_001025449 HPRD:18740 USP27X-AS1 - USP27X antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_187 chr1 34527956 34527956 + 4.57314 NA intron (NM_052896, intron 2 of 69) intron (NM_052896, intron 2 of 69) 102919 NM_001281956 114784 Hs.656915 NM_052896 HPRD:13094 CSMD2 dJ1007G16.1|dJ1007G16.2|dJ947L8.1 CUB and Sushi multiple domains 2 protein-coding Atac153_MAPQ30_peak_3671 chr2 110023602 110023602 + 4.57314 NA intron (NM_001099289, intron 4 of 9) intron (NM_001099289, intron 4 of 9) -93521 NR_036224 100423027 NR_036224 miRBase:MI0015870 MIR4266 - microRNA 4266 ncRNA Atac153_MAPQ30_peak_6356 chr8 41476541 41476541 + 4.57314 NA intron (NM_178819, intron 12 of 12) intron (NM_178819, intron 12 of 12) 28337 NM_152568 157848 Hs.647132 NM_152568 NKX6-3 NKX6.3 NK6 homeobox 3 protein-coding Atac153_MAPQ30_peak_734 chr10 46969037 46969037 + 4.57314 NA intron (NM_031912, intron 2 of 7) MIRb|SINE|MIR 1564 NM_031912 83849 Hs.696346 NM_031912 HPRD:12161 SYT15 CHR10SYT|sytXV synaptotagmin XV protein-coding Atac153_MAPQ30_peak_4545 chr3 8988601 8988601 + 4.57314 NA intron (NM_020165, intron 4 of 12) L1MD3|LINE|L1 16558 NM_020165 56852 Hs.375684 NM_020165 HPRD:09242 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_1083 chr11 10751489 10751489 + 4.57314 NA Intergenic AluJb|SINE|Alu -21322 NM_014633 9646 Hs.725151 NM_014633 HPRD:06717 CTR9 SH2BP1|TSBP|p150|p150TSP CTR9, Paf1/RNA polymerase II complex component protein-coding Atac153_MAPQ30_peak_6362 chr8 42514939 42514939 + 4.57314 NA Intergenic Intergenic -37623 NM_000749 1142 Hs.654576 NM_000749 HPRD:00336 CHRNB3 - cholinergic receptor, nicotinic, beta 3 (neuronal) protein-coding Atac153_MAPQ30_peak_2210 chr15 67411344 67411344 + 4.57314 NA intron (NM_005902, intron 1 of 8) L2b|LINE|L2 -6710 NM_001145102 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Atac153_MAPQ30_peak_5075 chr4 53510078 53510078 + 4.57314 NA intron (NM_001286767, intron 1 of 8) intron (NM_001286767, intron 1 of 8) 12681 NM_001134223 64854 Hs.7966 NM_022832 HPRD:07507 USP46 - ubiquitin specific peptidase 46 protein-coding Atac153_MAPQ30_peak_752 chr10 49936015 49936015 + 4.57314 NA intron (NM_020945, intron 7 of 61) LTR16C|LTR|ERVL 42497 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding Atac153_MAPQ30_peak_2589 chr16 81726287 81726287 + 4.57314 NA intron (NM_198390, intron 11 of 20) intron (NM_198390, intron 11 of 20) 27328 NR_045112 100129617 Hs.657151 NR_045112 LOC100129617 - uncharacterized LOC100129617 ncRNA Atac153_MAPQ30_peak_436 chr1 175512368 175512368 + 4.57314 NA intron (NM_003285, intron 1 of 22) intron (NM_003285, intron 1 of 22) 200384 NM_003285 7143 Hs.659864 NM_003285 HPRD:03589 TNR TN-R tenascin R protein-coding Atac153_MAPQ30_peak_6682 chr9 91539816 91539816 + 4.57314 NA Intergenic Intergenic -65962 NM_001001938 286223 Hs.585118 NM_001001938 HPRD:12962 C9orf47 C9orf108|bA791O21.3 chromosome 9 open reading frame 47 protein-coding Atac153_MAPQ30_peak_6701 chr9 95510441 95510441 + 4.57314 NA intron (NM_001003800, intron 1 of 6) intron (NM_001003800, intron 1 of 6) 16642 NM_015250 23299 Hs.436939 NM_015250 HPRD:09826 BICD2 SMALED2|bA526D8.1 bicaudal D homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_1928 chr14 56384821 56384821 + 4.57314 NA Intergenic MER1B|DNA|hAT-Charlie -121429 NR_026797 645687 Hs.569345 NR_026796 LINC00520 C14orf34 long intergenic non-protein coding RNA 520 ncRNA Atac153_MAPQ30_peak_6140 chr7 131868665 131868665 + 4.57314 NA intron (NM_020911, intron 16 of 31) MER58A|DNA|hAT-Charlie 273686 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA Atac153_MAPQ30_peak_5304 chr5 45246931 45246931 + 4.57314 NA Intergenic L1PA15|LINE|L1 437904 NM_016640 10884 Hs.124165 NM_016640 HPRD:17597 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding Atac153_MAPQ30_peak_4996 chr4 6618365 6618365 + 4.57314 NA intron (NM_015274, intron 16 of 18) MLT1I|LTR|ERVL-MaLR -23453 NM_001272054 93621 Hs.406590 NM_033296 HPRD:17589 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding Atac153_MAPQ30_peak_4467 chr22 44416251 44416251 + 4.57314 NA intron (NM_001003828, intron 2 of 13) AluJr|SINE|Alu -3906 NM_013327 29780 Hs.475074 NM_013327 HPRD:16284 PARVB CGI-56 parvin, beta protein-coding Atac153_MAPQ30_peak_4034 chr20 23180286 23180286 + 4.57314 NA Intergenic Intergenic -67013 NR_034149 200261 Hs.352228 NM_182535 HPRD:14124 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA Atac153_MAPQ30_peak_5825 chr6 158442876 158442876 + 4.57314 NA intron (NM_003898, intron 2 of 26) intron (NM_003898, intron 2 of 26) 4796 NM_001178088 8871 Hs.434494 NM_003898 HPRD:10259 SYNJ2 INPP5H synaptojanin 2 protein-coding Atac153_MAPQ30_peak_5849 chr6 166946617 166946617 + 4.57314 NA intron (NM_001006932, intron 3 of 21) intron (NM_001006932, intron 3 of 21) -23696 NR_031734 100302141 NR_031734 MIR1913 MIRN1913|hsa-mir-1913 microRNA 1913 ncRNA Atac153_MAPQ30_peak_5635 chr6 31608706 31608706 + 4.57314 NA exon (NM_080703, exon 20 of 25) exon (NM_080703, exon 20 of 25) 7142 NR_106890 102466745 NR_106890 MIR6832 hsa-mir-6832 microRNA 6832 ncRNA Atac153_MAPQ30_peak_1376 chr11 126530426 126530426 + 4.57314 NA intron (NR_120533, intron 1 of 1) intron (NR_120533, intron 1 of 1) 4445 NR_120533 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA Atac153_MAPQ30_peak_6647 chr9 80756042 80756042 + 4.57314 NA Intergenic Intergenic -94949 NM_001098802 84131 Hs.374421 NM_032171 ENSG00000148019 CEP78 C9orf81|IP63 centrosomal protein 78kDa protein-coding Atac153_MAPQ30_peak_3752 chr2 133361782 133361782 + 4.57314 NA intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 66699 NM_144586 116372 Hs.432395 NM_144586 HPRD:14333 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding Atac153_MAPQ30_peak_4395 chr22 30698184 30698184 + 4.57314 NA intron (NM_031937, intron 2 of 8) MIRc|SINE|MIR -12568 NM_001037666 652968 Hs.444950 NM_001037666 ENSG00000239282 GATSL3 - GATS protein-like 3 protein-coding Atac153_MAPQ30_peak_1677 chr12 120681699 120681699 + 4.57314 NA intron (NM_001243756, intron 1 of 10) L2c|LINE|L2 6265 NM_025157 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding Atac153_MAPQ30_peak_5934 chr7 26047098 26047098 + 4.57314 NA Intergenic Intergenic -57492 NR_029597 406940 NR_029597 miRBase:MI0000253 MIR148A MIRN148|MIRN148A|hsa-mir-148 microRNA 148a ncRNA Atac153_MAPQ30_peak_2720 chr17 15095342 15095342 + 4.57314 NA Intergenic Intergenic 59671 NR_039884 100616125 NR_039884 MIR4731 - microRNA 4731 ncRNA Atac153_MAPQ30_peak_7249 chrX 142520489 142520489 + 4.57314 NA Intergenic Intergenic 84814 NM_001009609 139067 Hs.447320 NM_001009609 HPRD:18092 SPANXN3 CT11.8|SPANX-N3 SPANX family, member N3 protein-coding Atac153_MAPQ30_peak_582 chr1 231001544 231001544 + 4.57314 NA intron (NM_032800, intron 1 of 3) Helitron3Na_Mam|RC|Helitron 2758 NM_032800 84886 Hs.520494 NM_032800 HPRD:13359 C1orf198 - chromosome 1 open reading frame 198 protein-coding Atac153_MAPQ30_peak_4499 chr22 47718634 47718634 + 4.57314 NA Intergenic L2a|LINE|L2 164226 NR_109967 101927722 Hs.589927 NR_109967 ENSG00000218357 LOC101927722 - uncharacterized LOC101927722 ncRNA Atac153_MAPQ30_peak_591 chr1 233853884 233853884 + 4.57314 NA Intergenic MLT1F2|LTR|ERVL-MaLR 93986 NR_039625 100616390 NR_039625 MIR4427 - microRNA 4427 ncRNA Atac153_MAPQ30_peak_116 chr1 19271639 19271639 + 4.57314 NA intron (NM_001136265, intron 1 of 8) L2c|LINE|L2 11187 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding Atac153_MAPQ30_peak_3420 chr2 11974636 11974636 + 4.57314 NA Intergenic MLT1J2|LTR|ERVL-MaLR 2476 NR_036226 100422996 NR_036226 miRBase:MI0015872 MIR4262 - microRNA 4262 ncRNA Atac153_MAPQ30_peak_1366 chr11 124147584 124147584 + 4.57314 NA Intergenic L1PB1|LINE|L1 12861 NM_001005198 219865 Hs.722725 NM_001005198 HPRD:17790 OR8G5 OR11-298|OR8G5P|OR8G6 olfactory receptor, family 8, subfamily G, member 5 protein-coding Atac153_MAPQ30_peak_3185 chr19 2407648 2407648 + 4.57314 NA intron (NM_182973, intron 6 of 16) AluJb|SINE|Alu 17864 NM_182973 360200 Hs.465560 NM_182973 HPRD:07124 TMPRSS9 - transmembrane protease, serine 9 protein-coding Atac153_MAPQ30_peak_4739 chr3 64670515 64670515 + 4.57314 NA promoter-TSS (NR_038264) promoter-TSS (NR_038264) -31 NR_038264 100507098 Hs.660881 NR_038264 ENSG00000241684 ADAMTS9-AS2 - ADAMTS9 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_2409 chr16 13323136 13323136 + 4.57314 NA intron (NM_001145204, intron 4 of 4) L2a|LINE|L2 327659 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding Atac153_MAPQ30_peak_1692 chr12 124789481 124789481 + 4.57314 NA intron (NM_181709, intron 1 of 2) intron (NM_181709, intron 1 of 2) 15771 NM_181709 144347 Hs.432901 NM_181709 HPRD:14066 FAM101A CFM2 family with sequence similarity 101, member A protein-coding Atac153_MAPQ30_peak_5873 chr6 170503928 170503928 + 4.57314 NA Intergenic Intergenic 67729 NR_002787 154449 Hs.447751 NR_002787 ENSG00000230960 LOC154449 - uncharacterized LOC154449 ncRNA Atac153_MAPQ30_peak_3425 chr2 15133250 15133250 + 4.57314 NA Intergenic MIRb|SINE|MIR 358035 NM_001291410 653602 Hs.657296 NM_001291410 LOC653602 - uncharacterized LOC653602 protein-coding Atac153_MAPQ30_peak_3089 chr18 46145261 46145261 + 4.57314 NA intron (NM_001142397, intron 2 of 12) intron (NM_001142397, intron 2 of 12) -51710 NR_039897 100616366 NR_039897 MIR4743 - microRNA 4743 ncRNA Atac153_MAPQ30_peak_609 chr1 242602450 242602450 + 4.57314 NA intron (NM_152666, intron 2 of 10) MLT1J1|LTR|ERVL-MaLR 10334 NM_001195811 200150 Hs.672452 NM_152666 HPRD:08812 PLD5 PLDC phospholipase D family, member 5 protein-coding Atac153_MAPQ30_peak_2144 chr15 42576143 42576143 + 4.57314 NA intron (NM_198141, intron 3 of 23) intron (NM_198141, intron 3 of 23) 9777 NM_198141 2595 Hs.730806 NM_198141 HPRD:00077 GANC - glucosidase, alpha; neutral C protein-coding Atac153_MAPQ30_peak_171 chr1 31189928 31189928 + 4.57314 NA intron (NM_002379, intron 3 of 7) intron (NM_002379, intron 3 of 7) -1691 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2430 chr16 19983339 19983339 + 4.57314 NA Intergenic Intergenic -87188 NM_016235 51704 Hs.148685 NM_016235 HPRD:16177 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor, class C, group 5, member B protein-coding Atac153_MAPQ30_peak_7239 chrX 138615709 138615709 + 4.57314 NA intron (NM_000133, intron 1 of 7) L2b|LINE|L2 2814 NM_000133 2158 Hs.522798 NM_000133 HPRD:02385 F9 FIX|HEMB|P19|PTC|THPH8 coagulation factor IX protein-coding Atac153_MAPQ30_peak_4405 chr22 32455044 32455044 + 4.57314 NA promoter-TSS (NM_001256314) promoter-TSS (NM_001256314) -113 NM_001256314 6523 Hs.1964 NM_000343 HPRD:01668 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 (sodium/glucose cotransporter), member 1 protein-coding Atac153_MAPQ30_peak_71 chr1 11922564 11922564 + 4.57314 NA Intergenic MIR|SINE|MIR -3572 NM_002521 4879 Hs.219140 NM_002521 HPRD:08974 NPPB BNP natriuretic peptide B protein-coding Atac153_MAPQ30_peak_7152 chrX 107366919 107366919 + 4.57314 NA intron (NM_052936, intron 1 of 12) intron (NM_052936, intron 1 of 12) 32020 NM_178270 115201 Hs.8763 NM_052936 HPRD:06455 ATG4A APG4A|AUTL2 autophagy related 4A, cysteine peptidase protein-coding Atac153_MAPQ30_peak_1481 chr12 30308727 30308727 + 4.57314 NA Intergenic X3_LINE|LINE|RTE-BovB -371035 NM_175861 83857 Hs.401954 NM_175861 HPRD:12472 TMTC1 OLF|TMTC1A transmembrane and tetratricopeptide repeat containing 1 protein-coding Atac153_MAPQ30_peak_4132 chr20 45360367 45360367 + 4.57314 NA intron (NM_030777, intron 4 of 4) intron (NM_030777, intron 4 of 4) 22088 NM_030777 81031 Hs.305971 NM_030777 HPRD:05851 SLC2A10 ATS|GLUT10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding Atac153_MAPQ30_peak_7148 chrX 106572524 106572524 + 4.57314 NA Intergenic L2c|LINE|L2 122662 NM_173494 139212 Hs.128836 NM_173494 HPRD:06650 PIH1D3 CXorf41|NYSAR97 PIH1 domain containing 3 protein-coding Atac153_MAPQ30_peak_3132 chr18 61695333 61695333 + 4.57314 NA Intergenic Intergenic 58070 NM_198833 5271 Hs.368077 NM_002640 HPRD:03412 SERPINB8 CAP2|PI8 serpin peptidase inhibitor, clade B (ovalbumin), member 8 protein-coding Atac153_MAPQ30_peak_6128 chr7 129406972 129406972 + 4.57314 NA Intergenic Intergenic 3360 NR_029614 406958 NR_029614 miRBase:MI0000272 MIR182 MIRN182|miRNA182 microRNA 182 ncRNA Atac153_MAPQ30_peak_269 chr1 55298672 55298672 + 4.57314 NA intron (NM_001110533, intron 9 of 9) AluJr|SINE|Alu 26936 NM_152607 163747 Hs.376018 NM_152607 HPRD:08807 C1orf177 - chromosome 1 open reading frame 177 protein-coding Atac153_MAPQ30_peak_3190 chr19 3100127 3100127 + 4.57314 NA intron (NM_002067, intron 1 of 6) intron (NM_002067, intron 1 of 6) 5719 NM_002067 2767 Hs.650575 NM_002067 GNA11 FBH|FBH2|FHH2|GNA-11|HHC2|HYPOC2 guanine nucleotide binding protein (G protein), alpha 11 (Gq class) protein-coding Atac153_MAPQ30_peak_1260 chr11 72377307 72377307 + 4.57314 NA intron (NM_002599, intron 1 of 30) intron (NM_002599, intron 1 of 30) 2801 NM_001146209 5138 Hs.503163 NM_002599 HPRD:04041 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A, cGMP-stimulated protein-coding Atac153_MAPQ30_peak_2219 chr15 69265454 69265454 + 4.57314 NA intron (NR_031680, intron 3 of 4) ERVL-E-int|LTR|ERVL -41580 NM_024505 79400 Hs.657932 NM_024505 HPRD:07359 NOX5 - NADPH oxidase, EF-hand calcium binding domain 5 protein-coding Atac153_MAPQ30_peak_1771 chr13 26145526 26145526 + 4.57314 NA intron (NM_016529, intron 17 of 36) intron (NM_016529, intron 17 of 36) 199317 NM_016529 51761 Hs.444957 NM_016529 HPRD:05795 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase, aminophospholipid transporter, class I, type 8A, member 2 protein-coding Atac153_MAPQ30_peak_2792 chr17 31149868 31149868 + 4.57314 NA intron (NM_015194, intron 1 of 21) CpG 54034 NM_015194 4642 Hs.602063 NM_015194 HPRD:07581 MYO1D PPP1R108|myr4 myosin ID protein-coding Atac153_MAPQ30_peak_5964 chr7 35940386 35940386 + 4.57314 NA intron (NM_001011553, intron 11 of 12) intron (NM_001011553, intron 11 of 12) 99790 NM_001011553 989 Hs.191346 NM_001788 SEPT7 CDC10|CDC3|NBLA02942|SEPT7A septin 7 protein-coding Atac153_MAPQ30_peak_5494 chr5 170844169 170844169 + 4.57314 NA Intergenic L2a|LINE|L2 -2498 NM_003862 8817 Hs.87191 NM_003862 HPRD:04766 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding Atac153_MAPQ30_peak_1133 chr11 32175696 32175696 + 4.57314 NA Intergenic Intergenic 63219 NM_002901 5954 Hs.97887 NM_002901 HPRD:04111 RCN1 HEL-S-84|PIG20|RCAL|RCN reticulocalbin 1, EF-hand calcium binding domain protein-coding Atac153_MAPQ30_peak_54 chr1 9005049 9005049 + 4.57314 NA promoter-TSS (NM_001270500) promoter-TSS (NM_001270500) -844 NM_001270500 765 Hs.100322 NM_001215 HPRD:00264 CA6 CA-VI|GUSTIN carbonic anhydrase VI protein-coding Atac153_MAPQ30_peak_2883 chr17 58713802 58713802 + 4.57314 NA intron (NM_003620, intron 3 of 5) L2a|LINE|L2 36258 NM_003620 8493 Hs.286073 NM_003620 PPM1D PP2C-DELTA|WIP1 protein phosphatase, Mg2+/Mn2+ dependent, 1D protein-coding Atac153_MAPQ30_peak_5108 chr4 78294617 78294617 + 4.57314 NA Intergenic Intergenic -138290 NM_006419 10563 Hs.100431 NM_006419 HPRD:05513 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 chemokine (C-X-C motif) ligand 13 protein-coding Atac153_MAPQ30_peak_4491 chr22 47006108 47006108 + 4.57314 NA Intergenic Intergenic -16550 NM_015124 23151 Hs.475150 NM_015124 HPRD:11107 GRAMD4 DIP|dA59H18.1|dJ439F8.1 GRAM domain containing 4 protein-coding Atac153_MAPQ30_peak_1997 chr14 76841740 76841740 + 4.57314 NA intron (NM_004452, intron 1 of 10) intron (NM_004452, intron 1 of 10) 4050 NM_004452 2103 Hs.435845 NM_004452 HPRD:03700 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen-related receptor beta protein-coding Atac153_MAPQ30_peak_3473 chr2 28373791 28373791 + 4.57314 NA intron (NR_120504, intron 2 of 2) intron (NR_120504, intron 2 of 2) 56037 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA Atac153_MAPQ30_peak_3407 chr2 10347011 10347011 + 4.57314 NA intron (NM_182626, intron 2 of 2) L1MEe|LINE|L1 -14214 NR_036222 100422929 NR_036222 miRBase:MI0015868 MIR4261 - microRNA 4261 ncRNA Atac153_MAPQ30_peak_3500 chr2 37996246 37996246 + 4.57314 NA Intergenic Intergenic 60608 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA Atac153_MAPQ30_peak_7147 chrX 106127253 106127253 + 4.57314 NA Intergenic L1MA5|LINE|L1 -16141 NM_001171092 9075 Hs.522746 NM_020384 HPRD:06471 CLDN2 - claudin 2 protein-coding Atac153_MAPQ30_peak_4518 chr22 49488481 49488481 + 4.57314 NA Intergenic Intergenic 225899 NR_038944 100128946 Hs.535676 NR_038944 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA Atac153_MAPQ30_peak_1998 chr14 77333122 77333122 + 4.57314 NA intron (NM_194287, intron 12 of 13) intron (NM_194287, intron 12 of 13) 40397 NM_194287 145497 Hs.147276 NM_194287 HPRD:12621 LRRC74A C14orf166B|LRRC74 leucine rich repeat containing 74A protein-coding Atac153_MAPQ30_peak_6283 chr8 11371709 11371709 + 4.57314 NA intron (NM_001715, intron 1 of 12) intron (NM_001715, intron 1 of 12) 20188 NM_001715 640 Hs.146591 NM_001715 HPRD:01866 BLK MODY11 BLK proto-oncogene, Src family tyrosine kinase protein-coding Atac153_MAPQ30_peak_5881 chr7 751081 751081 + 4.57314 NA exon (NM_001164758, exon 2 of 11) exon (NM_001164758, exon 2 of 11) 1080 NM_002735 5575 Hs.520851 NM_002735 HPRD:01485 PRKAR1B PRKAR1 protein kinase, cAMP-dependent, regulatory, type I, beta protein-coding Atac153_MAPQ30_peak_7086 chrX 68752879 68752879 + 4.57314 NA TTS (NM_015686) TTS (NM_015686) 27801 NM_015686 27112 Hs.87619 NM_015686 HPRD:06740 FAM155B CXorf63|TED|TMEM28|bB57D9.1 family with sequence similarity 155, member B protein-coding Atac153_MAPQ30_peak_2211 chr15 67439188 67439188 + 4.57314 NA intron (NM_001145103, intron 1 of 8) intron (NM_001145103, intron 1 of 8) 8829 NM_001145103 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Atac153_MAPQ30_peak_6955 chrX 23732653 23732653 + 4.57314 NA intron (NM_001033583, intron 7 of 14) Tigger4a|DNA|TcMar-Tigger 28754 NM_001037171 23597 Hs.298885 NM_001033583 HPRD:06438 ACOT9 ACATE2|MT-ACT48|MTACT48 acyl-CoA thioesterase 9 protein-coding Atac153_MAPQ30_peak_1262 chr11 72885119 72885119 + 4.57314 NA Intergenic Intergenic -31976 NM_014824 9873 Hs.744959 NM_014824 HPRD:13321 FCHSD2 NWK|SH3MD3 FCH and double SH3 domains 2 protein-coding Atac153_MAPQ30_peak_3718 chr2 128598877 128598877 + 4.57314 NA Intergenic Intergenic 16852 NM_004805 5433 Hs.715348 NM_004805 HPRD:16191 POLR2D HSRBP4|HSRPB4|RBP4|RPB16 polymerase (RNA) II (DNA directed) polypeptide D protein-coding Atac153_MAPQ30_peak_2037 chr14 94566461 94566461 + 4.57314 NA intron (NM_145249, intron 2 of 4) L2|LINE|L2 -10618 NM_001288954 3429 Hs.532634 NM_005532 HPRD:02479 IFI27 FAM14D|ISG12|ISG12A|P27 interferon, alpha-inducible protein 27 protein-coding Atac153_MAPQ30_peak_551 chr1 225605581 225605581 + 4.57314 NA intron (NM_002296, intron 6 of 13) FLAM_A|SINE|Alu 10234 NM_002296 3930 Hs.435166 NM_002296 HPRD:02488 LBR DHCR14B|LMN2R|PHA|TDRD18 lamin B receptor protein-coding Atac153_MAPQ30_peak_6105 chr7 106617166 106617166 + 4.57314 NA Intergenic Intergenic -68012 NM_002736 5577 Hs.433068 NM_002736 HPRD:01486 PRKAR2B PRKAR2|RII-BETA protein kinase, cAMP-dependent, regulatory, type II, beta protein-coding Atac153_MAPQ30_peak_6437 chr8 98993851 98993851 + 4.57314 NA intron (NM_002380, intron 6 of 18) intron (NM_002380, intron 6 of 18) 60594 NR_002581 26775 Hs.684855 NR_002581 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA Atac153_MAPQ30_peak_5163 chr4 150943220 150943220 + 4.57314 NA Intergenic Intergenic -56206 NM_001040260 166614 Hs.591683 NM_152619 HPRD:13122 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin-like kinase 2 protein-coding Atac153_MAPQ30_peak_4065 chr20 31656208 31656208 + 4.57314 NA intron (NM_182658, intron 9 of 14) L2a|LINE|L2 12978 NM_182658 359710 Hs.472442 NM_182658 HPRD:16644 BPIFB3 C20orf185|LPLUNC3|RYA3|dJ726C3.4 BPI fold containing family B, member 3 protein-coding Atac153_MAPQ30_peak_5524 chr5 176558086 176558086 + 4.57314 NA Intergenic MIRb|SINE|MIR -1994 NM_172349 64324 Hs.106861 NM_022455 HPRD:09455 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding Atac153_MAPQ30_peak_6471 chr8 124598340 124598340 + 4.57314 NA Intergenic Intergenic -44847 NM_001242463 114907 Hs.403933 NM_058229 HPRD:05966 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding Atac153_MAPQ30_peak_5045 chr4 23866199 23866199 + 4.57314 NA intron (NM_013261, intron 2 of 12) intron (NM_013261, intron 2 of 12) 25501 NM_013261 10891 Hs.527078 NM_013261 HPRD:05155 PPARGC1A LEM6|PGC-1(alpha)|PGC-1v|PGC1|PGC1A|PPARGC1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha protein-coding Atac153_MAPQ30_peak_1499 chr12 43224404 43224404 + 4.57314 NA Intergenic Intergenic -184104 NR_110042 101927058 Hs.434238 NR_110042 ENSG00000257510 LOC101927058 - uncharacterized LOC101927058 ncRNA Atac153_MAPQ30_peak_4829 chr3 127998024 127998024 + 4.57314 NA intron (NM_021937, intron 4 of 6) intron (NM_021937, intron 4 of 6) 125711 NM_021937 60678 Hs.477498 NM_021937 HPRD:07409 EEFSEC EFSEC|SELB eukaryotic elongation factor, selenocysteine-tRNA-specific protein-coding Atac153_MAPQ30_peak_2925 chr17 72631792 72631792 + 4.57314 NA Intergenic LTR56|LTR|ERV1 -11895 NM_181449 342510 Hs.158954 NM_181449 HPRD:17158 CD300E CD300LE|CLM-2|CLM2|CMRF35-A5|IREM-2|IREM2|PIgR-2|PIgR2 CD300e molecule protein-coding Atac153_MAPQ30_peak_2292 chr15 85841731 85841731 + 4.57314 NA Intergenic AluJr|SINE|Alu -82116 NM_007200 11214 Hs.459211 NM_006738 HPRD:05253 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A kinase (PRKA) anchor protein 13 protein-coding Atac153_MAPQ30_peak_5445 chr5 149549889 149549889 + 4.57314 NA intron (NM_001804, intron 1 of 2) L2a|LINE|L2 3545 NM_001804 1044 Hs.1545 NM_001804 HPRD:02849 CDX1 - caudal type homeobox 1 protein-coding Atac153_MAPQ30_peak_2362 chr16 4182141 4182141 + 4.57314 NA Intergenic Intergenic -15955 NM_001116 115 Hs.391860 NM_001116 HPRD:04489 ADCY9 AC9 adenylate cyclase 9 protein-coding Atac153_MAPQ30_peak_6673 chr9 87771935 87771935 + 4.57314 NA Intergenic Intergenic 486643 NM_001018064 4915 Hs.494312 NM_006180 HPRD:02712 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic tyrosine kinase, receptor, type 2 protein-coding Atac153_MAPQ30_peak_2765 chr17 21253885 21253885 + 4.57314 NA Intergenic Intergenic -25814 NM_021012 3768 Hs.200629 NM_021012 HPRD:09083 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium inwardly-rectifying channel, subfamily J, member 12 protein-coding Atac153_MAPQ30_peak_6792 chr9 124446241 124446241 + 4.57314 NA intron (NM_032552, intron 2 of 16) intron (NM_032552, intron 2 of 16) -58823 NM_138709 153090 Hs.522378 NM_032552 HPRD:09903 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding Atac153_MAPQ30_peak_3389 chr2 3658289 3658289 + 4.57314 NA intron (NM_001255989, intron 1 of 3) intron (NM_001255989, intron 1 of 3) 4647 NM_001255989 78989 Hs.32603 NM_024027 HPRD:10847 COLEC11 3MC2|CL-K1-I|CL-K1-II|CL-K1-IIa|CL-K1-IIb|CLK1 collectin sub-family member 11 protein-coding Atac153_MAPQ30_peak_84 chr1 15122479 15122479 + 4.57314 NA intron (NM_201628, intron 1 of 14) L2a|LINE|L2 -128146 NM_001018000 23254 Hs.368823 NM_015209 HPRD:11122 KAZN KAZ kazrin, periplakin interacting protein protein-coding Atac153_MAPQ30_peak_5850 chr6 167182916 167182916 + 4.57314 NA intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 92855 NM_001006932 6196 Hs.655277 NM_021135 HPRD:03403 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|pp90RSK3 ribosomal protein S6 kinase, 90kDa, polypeptide 2 protein-coding Atac153_MAPQ30_peak_1351 chr11 119646655 119646655 + 4.57314 NA Intergenic L3|LINE|CR1 46362 NR_120587 102724301 Hs.637640 NR_120587 LOC102724301 - uncharacterized LOC102724301 ncRNA Atac153_MAPQ30_peak_7228 chrX 136149973 136149973 + 4.57314 NA Intergenic L1ME2z|LINE|L1 -36140 NM_054021 83550 Hs.350569 NM_054021 HPRD:02315 GPR101 GPCR6 G protein-coupled receptor 101 protein-coding Atac153_MAPQ30_peak_2663 chr17 3421260 3421260 + 4.57314 NA intron (NM_145068, intron 15 of 17) AluSx|SINE|Alu 40029 NM_145068 162514 Hs.446255 NM_145068 HPRD:06141 TRPV3 OLMS|VRL3 transient receptor potential cation channel, subfamily V, member 3 protein-coding Atac153_MAPQ30_peak_1163 chr11 44838391 44838391 + 4.57314 NA intron (NM_130783, intron 1 of 8) intron (NM_130783, intron 1 of 8) 52415 NM_130783 90139 Hs.385634 NM_130783 HPRD:17435 TSPAN18 TSPAN tetraspanin 18 protein-coding Atac153_MAPQ30_peak_4118 chr20 42630509 42630509 + 4.57314 NA intron (NM_032883, intron 3 of 9) intron (NM_032883, intron 3 of 9) 55973 NM_001098798 84969 Hs.26608 NM_032883 HPRD:12734 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding Atac153_MAPQ30_peak_7161 chrX 109880081 109880081 + 4.57314 NA Intergenic Intergenic 116541 NR_002718 6998 Hs.592361 NR_002718 ENSG00000225366 TDGF1P3 CR-3|CRIPTO|CRIPTO-3|CRIPTO3|TDGF1|TDGF2|TDGF3 teratocarcinoma-derived growth factor 1 pseudogene 3 pseudo Atac153_MAPQ30_peak_3557 chr2 65258656 65258656 + 4.57314 NA Intergenic Intergenic -24839 NM_015147 23177 Hs.709257 NM_015147 HPRD:13808 CEP68 KIAA0582 centrosomal protein 68kDa protein-coding Atac153_MAPQ30_peak_2080 chr14 102819667 102819667 + 4.57314 NA intron (NM_032630, intron 3 of 4) L1MC3|LINE|L1 9586 NM_032630 51550 Hs.129634 NM_032630 HPRD:16715 CINP - cyclin-dependent kinase 2 interacting protein protein-coding Atac153_MAPQ30_peak_1177 chr11 45939741 45939741 + 4.57314 NA promoter-TSS (NM_057174) promoter-TSS (NM_057174) -67 NM_004813 9409 Hs.100915 NM_004813 HPRD:04526 PEX16 PBD8A|PBD8B peroxisomal biogenesis factor 16 protein-coding Atac153_MAPQ30_peak_3365 chr19 58953302 58953302 + 4.57314 NA Intergenic Intergenic -1713 NM_003433 7691 Hs.156169 NM_003433 HPRD:07240 ZNF132 pHZ-12 zinc finger protein 132 protein-coding Atac153_MAPQ30_peak_7212 chrX 131034233 131034233 + 4.57314 NA Intergenic Intergenic -69562 NR_026975 286467 Hs.720385 NR_026975 ENSG00000213468 FIRRE LINC01200 firre intergenic repeating RNA element ncRNA Atac153_MAPQ30_peak_5394 chr5 131704913 131704913 + 4.57314 NA promoter-TSS (NM_003060) promoter-TSS (NM_003060) -488 NM_003060 6584 Hs.443572 NM_003060 HPRD:04539 SLC22A5 CDSP|OCTN2|OCTN2VT solute carrier family 22 (organic cation/carnitine transporter), member 5 protein-coding Atac153_MAPQ30_peak_2813 chr17 38115455 38115455 + 4.57314 NA Intergenic Intergenic -3771 NM_178171 284110 Hs.448873 NM_178171 HPRD:17081 GSDMA GSDM|GSDM1 gasdermin A protein-coding Atac153_MAPQ30_peak_3453 chr2 23259031 23259031 + 4.57314 NA Intergenic Intergenic -349267 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch-like family member 29 protein-coding Atac153_MAPQ30_peak_6177 chr7 142241708 142241708 + 4.57314 NA Intergenic Intergenic -132423 NM_001190487 100463482 NM_001190487 ENSG00000270672 MTRNR2L6 HN6 MT-RNR2-like 6 protein-coding Atac153_MAPQ30_peak_158 chr1 28298721 28298721 + 4.57314 NA 3' UTR (NM_001282562, exon 17 of 17) 3' UTR (NM_001282562, exon 17 of 17) 12217 NM_018053 55113 Hs.55024 NM_018053 HPRD:07661 XKR8 XRG8|hXkr8 XK, Kell blood group complex subunit-related family, member 8 protein-coding Atac153_MAPQ30_peak_2468 chr16 27987872 27987872 + 4.57314 NA intron (NM_001109763, intron 1 of 6) intron (NM_001109763, intron 1 of 6) 86958 NM_001109763 146395 Hs.91910 NM_144675 HPRD:14464 GSG1L PRO19651 GSG1-like protein-coding Atac153_MAPQ30_peak_4414 chr22 33838390 33838390 + 4.57314 NA intron (NM_004737, intron 7 of 15) MER5A|DNA|hAT-Charlie -5735 NR_039921 100616295 NR_039921 MIR4764 - microRNA 4764 ncRNA Atac153_MAPQ30_peak_5223 chr5 2908347 2908347 + 4.57314 NA Intergenic Intergenic 156102 NR_122125 153571 Hs.668017 NM_178569 HPRD:16706 C5orf38 CEI|IRX2NB chromosome 5 open reading frame 38 protein-coding Atac153_MAPQ30_peak_1520 chr12 52671352 52671352 + 4.57314 NA Intergenic Intergenic 13947 NM_002281 3887 Hs.658118 NM_002281 HPRD:03691 KRT81 HB1|Hb-1|KRTHB1|MLN137|ghHkb1|hHAKB2-1 keratin 81 protein-coding Atac153_MAPQ30_peak_6402 chr8 73298203 73298203 + 4.57314 NA Intergenic AluJr|SINE|Alu -134334 NR_033867 392232 Hs.454043 NR_033867 ENSG00000250979 LOC392232 - transient receptor potential cation channel, subfamily A, member 1 pseudogene pseudo Atac153_MAPQ30_peak_7149 chrX 106631935 106631935 + 4.57314 NA Intergenic LTR16A|LTR|ERVL -133745 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding Atac153_MAPQ30_peak_5796 chr6 138139398 138139398 + 4.57314 NA Intergenic Intergenic -48927 NM_001270508 7128 Hs.211600 NM_006290 HPRD:01857 TNFAIP3 A20|OTUD7C|TNFA1P2 tumor necrosis factor, alpha-induced protein 3 protein-coding Atac153_MAPQ30_peak_5912 chr7 7343003 7343003 + 4.57314 NA Intergenic L1PBa|LINE|L1 48218 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA Atac153_MAPQ30_peak_1868 chr13 111114515 111114515 + 4.57314 NA exon (NM_001846, exon 23 of 48) exon (NM_001846, exon 23 of 48) 46011 NR_046583 100874203 Hs.508716 NR_046583 ENSG00000232814 COL4A2-AS1 - COL4A2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4630 chr3 38059509 38059509 + 4.57314 NA intron (NM_001130964, intron 2 of 14) intron (NM_001130964, intron 2 of 14) 6769 NM_001130964 5333 Hs.80776 NM_006225 HPRD:09073 PLCD1 NDNC3|PLC-III phospholipase C, delta 1 protein-coding Atac153_MAPQ30_peak_771 chr10 64135754 64135754 + 4.57314 NA promoter-TSS (NR_104162) promoter-TSS (NR_104162) -868 NR_104162 283045 NR_104162 LOC283045 - uncharacterized LOC283045 ncRNA Atac153_MAPQ30_peak_4823 chr3 127265164 127265164 + 4.57314 NA Intergenic MIR3|SINE|MIR -8541 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA Atac153_MAPQ30_peak_4497 chr22 47532284 47532284 + 4.57314 NA intron (NR_104292, intron 13 of 13) intron (NR_104292, intron 13 of 13) -220346 NR_122047 642757 Hs.632786 NR_122047 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1395 chr11 131074211 131074211 + 4.57314 NA Intergenic Intergenic -166160 NM_001048209 50863 Hs.504352 NM_016522 HPRD:06398 NTM HNT|IGLON2|NTRI neurotrimin protein-coding Atac153_MAPQ30_peak_2846 chr17 45894326 45894326 + 4.57314 NA intron (NM_145798, intron 8 of 22) intron (NM_145798, intron 8 of 22) 4821 NM_145798 114881 Hs.463320 NM_017731 HPRD:09477 OSBPL7 ORP7 oxysterol binding protein-like 7 protein-coding Atac153_MAPQ30_peak_4682 chr3 50425476 50425476 + 4.57314 NA intron (NM_001005505, intron 4 of 37) intron (NM_001005505, intron 4 of 37) 22711 NR_111914 11068 Hs.149443 NM_007022 HPRD:06143 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family, member D2 protein-coding Atac153_MAPQ30_peak_70 chr1 11886918 11886918 + 4.57314 NA intron (NR_046428, intron 9 of 22) intron (NR_046428, intron 9 of 22) -13458 NR_037806 100379251 Hs.710015 NR_037806 NPPA-AS1 NPPA-AS|NPPAAS NPPA antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1880 chr13 113020267 113020267 + 4.57314 NA Intergenic Intergenic -10384 NM_145248 122258 Hs.97592 NM_145248 HPRD:14022 SPACA7 C13orf28 sperm acrosome associated 7 protein-coding Atac153_MAPQ30_peak_785 chr10 71839534 71839534 + 4.57314 NA intron (NM_018649, intron 2 of 8) L2b|LINE|L2 27177 NM_018649 55506 Hs.499953 NM_018649 HPRD:13625 H2AFY2 macroH2A2 H2A histone family, member Y2 protein-coding Atac153_MAPQ30_peak_4689 chr3 50694896 50694896 + 4.57314 NA Intergenic Intergenic -17615 NR_039950 100616138 NR_039950 miRBase:MI0017434 MIR4787 - microRNA 4787 ncRNA Atac153_MAPQ30_peak_215 chr1 40374282 40374282 + 4.57314 NA Intergenic MER77B|LTR|ERVL -6595 NM_001033082 4610 Hs.437922 NM_005376 HPRD:01279 MYCL LMYC|MYCL1|bHLHe38 v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog protein-coding Atac153_MAPQ30_peak_5441 chr5 148489923 148489923 + 4.57314 NA TTS (NR_122044) TTS (NR_122044) -31123 NM_001301015 22885 Hs.49688 NM_014945 HPRD:12411 ABLIM3 - actin binding LIM protein family, member 3 protein-coding Atac153_MAPQ30_peak_2433 chr16 20990727 20990727 + 4.57314 NA exon (NM_017539, exon 50 of 62) exon (NM_017539, exon 50 of 62) 78652 NM_001128302 57149 Hs.745012 NM_020424 HPRD:14254 LYRM1 A211C6.1 LYR motif containing 1 protein-coding Atac153_MAPQ30_peak_7262 chrX 147369915 147369915 + 4.57314 NA Intergenic MLT1D|LTR|ERVL-MaLR -212224 NM_001169124 2334 Hs.496911 NM_002025 HPRD:02397 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family, member 2 protein-coding Atac153_MAPQ30_peak_980 chr10 129024473 129024473 + 4.57314 NA intron (NM_001380, intron 27 of 51) intron (NM_001380, intron 27 of 51) -30051 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 FAM196A C10orf141 family with sequence similarity 196, member A protein-coding Atac153_MAPQ30_peak_698 chr10 28586764 28586764 + 4.57314 NA Intergenic Tigger1|DNA|TcMar-Tigger -8485 NR_107053 102465880 NR_107053 MIR8086 hsa-mir-8086 microRNA 8086 ncRNA Atac153_MAPQ30_peak_4258 chr21 35892909 35892909 + 4.57314 NA intron (NM_001285392, intron 3 of 3) intron (NM_001285392, intron 3 of 3) 4026 NM_001285393 1827 Hs.282326 NM_004414 HPRD:04226 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding Atac153_MAPQ30_peak_1323 chr11 113523577 113523577 + 4.57314 NA Intergenic Intergenic 53518 NR_110047 80975 Hs.46720 NM_030770 HPRD:05995 TMPRSS5 SPINESIN transmembrane protease, serine 5 protein-coding Atac153_MAPQ30_peak_1045 chr11 4201048 4201048 + 4.57314 NA Intergenic MIR3|SINE|MIR -7334 NR_047550 100506082 Hs.445705 NR_047550 ENSG00000254480 LOC100506082 - uncharacterized LOC100506082 ncRNA Atac153_MAPQ30_peak_6346 chr8 38644166 38644166 + 4.57314 NA promoter-TSS (NM_006283) promoter-TSS (NM_006283) -556 NM_001122824 6867 Hs.279245 NM_006283 HPRD:10391 TACC1 Ga55 transforming, acidic coiled-coil containing protein 1 protein-coding Atac153_MAPQ30_peak_4297 chr21 43029830 43029830 + 4.57314 NA Intergenic Intergenic -69632 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA Atac153_MAPQ30_peak_4466 chr22 44276866 44276866 + 4.57314 NA intron (NM_138814, intron 8 of 8) intron (NM_138814, intron 8 of 8) 11027 NM_138814 150379 Hs.248086 NM_138814 HPRD:17870 PNPLA5 GS2L|dJ388M5|dJ388M5.4 patatin-like phospholipase domain containing 5 protein-coding Atac153_MAPQ30_peak_4451 chr22 40815903 40815903 + 4.57314 NA intron (NM_001282661, intron 10 of 13) intron (NM_001282661, intron 10 of 13) 43541 NM_001282660 57591 Hs.654688 NM_020831 HPRD:10445 MKL1 BSAC|MAL|MRTF-A megakaryoblastic leukemia (translocation) 1 protein-coding Atac153_MAPQ30_peak_826 chr10 80953334 80953334 + 4.57314 NA intron (NM_020338, intron 4 of 24) L2b|LINE|L2 124542 NM_020338 57178 Hs.193118 NM_020338 HPRD:12115 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 zinc finger, MIZ-type containing 1 protein-coding Atac153_MAPQ30_peak_174 chr1 32820952 32820952 + 4.57314 NA Intergenic Intergenic 6892 NM_001167676 100128071 Hs.660539 NM_001167676 ENSG00000225828 FAM229A - family with sequence similarity 229, member A protein-coding Atac153_MAPQ30_peak_2651 chr17 1561957 1561957 + 4.57314 NA exon (NM_006445, exon 33 of 43) exon (NM_006445, exon 33 of 43) -8565 NM_031430 83547 Hs.534497 NM_031430 HPRD:09706 RILP - Rab interacting lysosomal protein protein-coding Atac153_MAPQ30_peak_1890 chr14 21207602 21207602 + 4.57314 NA Intergenic Intergenic -6497 NM_006683 10876 Hs.304757 NM_006683 HPRD:13289 EDDM3A EP3A|FAM12A|HE3-ALPHA|HE3A|HE3ALPHA|RAM1 epididymal protein 3A protein-coding Atac153_MAPQ30_peak_5094 chr4 58303802 58303802 + 4.57314 NA Intergenic Intergenic -327251 NM_001253835 3490 Hs.479808 NM_001553 HPRD:04183 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin-like growth factor binding protein 7 protein-coding Atac153_MAPQ30_peak_2514 chr16 55951354 55951354 + 4.57314 NA intron (NM_001190158, intron 2 of 13) MLT1F2|LTR|ERVL-MaLR 38589 NM_001190158 221223 Hs.350800 NM_145024 HPRD:07016 CES5A CAUXIN|CES4C1|CES5|CES7|HEL126 carboxylesterase 5A protein-coding Atac153_MAPQ30_peak_4813 chr3 125988207 125988207 + 4.57314 NA Intergenic Intergenic 88029 NM_014079 28999 Hs.272215 NM_014079 HPRD:07568 KLF15 KKLF Kruppel-like factor 15 protein-coding Atac153_MAPQ30_peak_3143 chr18 72333681 72333681 + 4.57314 NA Intergenic MLT1F1|LTR|ERVL-MaLR -9238 NM_001146190 55628 Hs.536490 NM_017757 HPRD:11713 ZNF407 - zinc finger protein 407 protein-coding Atac153_MAPQ30_peak_419 chr1 164656766 164656766 + 4.57314 NA intron (NM_001204961, intron 2 of 7) AluJb|SINE|Alu 87112 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA Atac153_MAPQ30_peak_791 chr10 72836015 72836015 + 4.57314 NA Intergenic Intergenic -136277 NM_001244889 219699 Hs.522997 NM_170744 HPRD:08487 UNC5B UNC5H2|p53RDL1 unc-5 homolog B (C. elegans) protein-coding Atac153_MAPQ30_peak_6694 chr9 94496041 94496041 + 4.57314 NA intron (NM_004560, intron 5 of 8) intron (NM_004560, intron 5 of 8) -97414 NR_037489 100500902 NR_037489 MIR3910-2 - microRNA 3910-2 ncRNA Atac153_MAPQ30_peak_2288 chr15 83345267 83345267 + 4.57314 NA exon (NM_001278511, exon 13 of 25) exon (NM_001278511, exon 13 of 25) -28500 NM_030594 64506 Hs.459132 NM_030594 HPRD:09553 CPEB1 CEBP|CPE-BP1|CPEB|CPEB-1|hCPEB-1 cytoplasmic polyadenylation element binding protein 1 protein-coding Atac153_MAPQ30_peak_840 chr10 86083356 86083356 + 4.57314 NA Intergenic HERVL-int|LTR|ERVL -4989 NM_001284240 54462 Hs.461988 NM_018999 HPRD:13832 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine-rich protein 2 protein-coding Atac153_MAPQ30_peak_3051 chr18 34837730 34837730 + 4.57314 NA intron (NM_001025089, intron 10 of 11) intron (NM_001025089, intron 10 of 11) 308270 NM_001025089 56853 Hs.435976 NM_020180 HPRD:12534 CELF4 BRUNOL-4|BRUNOL4 CUGBP, Elav-like family member 4 protein-coding Atac153_MAPQ30_peak_6324 chr8 26271145 26271145 + 4.57314 NA TTS (NM_004331) TTS (NM_004331) 30622 NM_004331 665 Hs.131226 NM_004331 HPRD:07288 BNIP3L BNIP3a|NIX BCL2/adenovirus E1B 19kDa interacting protein 3-like protein-coding Atac153_MAPQ30_peak_4832 chr3 128273102 128273102 + 4.57314 NA Intergenic MLT1K|LTR|ERVL-MaLR 21827 NM_007354 23434 Hs.194283 NM_007354 HPRD:13607 C3orf27 GR6 chromosome 3 open reading frame 27 ncRNA Atac153_MAPQ30_peak_4806 chr3 123537149 123537149 + 4.57314 NA intron (NM_053025, intron 3 of 33) L3|LINE|CR1 66000 NM_053026 4638 Hs.477375 NM_005965 HPRD:02952 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding Atac153_MAPQ30_peak_6071 chr7 86958925 86958925 + 4.57314 NA intron (NR_015381, intron 2 of 2) LTR25-int|LTR|ERV1 15883 NR_015381 11257 Hs.274329 NM_007233 HPRD:10276 TP53TG1 LINC00096|NCRNA00096|P53TG1|P53TG1-D|TP53AP1 TP53 target 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_5640 chr6 33075397 33075397 + 4.57314 NA Intergenic Intergenic -4896 NR_001435 3116 Hs.665450 NR_001435 ENSG00000224557 HLA-DPB2 DP2B|DPB2|DPbeta2|HLA-DP2B major histocompatibility complex, class II, DP beta 2 (pseudogene) pseudo Atac153_MAPQ30_peak_6209 chr7 153648342 153648342 + 4.57314 NA intron (NM_001039350, intron 1 of 25) intron (NM_001039350, intron 1 of 25) 64160 NM_001039350 1804 Hs.490684 NM_001936 HPRD:00525 DPP6 DPPX|VF2 dipeptidyl-peptidase 6 protein-coding Atac153_MAPQ30_peak_3292 chr19 36890122 36890122 + 4.57314 NA intron (NM_133466, intron 4 of 4) intron (NM_133466, intron 4 of 4) 19428 NM_133466 284406 Hs.558734 NM_133466 HPRD:11725 ZFP82 ZNF545 ZFP82 zinc finger protein protein-coding Atac153_MAPQ30_peak_608 chr1 240041816 240041816 + 4.57314 NA intron (NM_000740, intron 4 of 4) MER1A|DNA|hAT-Charlie 21356 NR_046582 100873984 Hs.199475 NR_046582 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1650 chr12 113682322 113682322 + 4.57314 NA intron (NM_001301214, intron 1 of 26) intron (NM_001301214, intron 1 of 26) 256 NM_001301214 53373 Hs.524763 NM_017901 HPRD:18217 TPCN1 TPC1 two pore segment channel 1 protein-coding Atac153_MAPQ30_peak_5799 chr6 139859712 139859712 + 4.57314 NA Intergenic Intergenic -63979 NR_033919 645434 Hs.666240 NR_033919 LOC645434 - uncharacterized LOC645434 ncRNA Atac153_MAPQ30_peak_1760 chr13 22242892 22242892 + 4.57314 NA Intergenic Intergenic -2323 NM_002010 2254 Hs.111 NM_002010 HPRD:02951 FGF9 FGF-9|GAF|HBFG-9|HBGF-9|SYNS3 fibroblast growth factor 9 protein-coding Atac153_MAPQ30_peak_5194 chr4 184717928 184717928 + 4.57314 NA Intergenic Intergenic -108581 NM_020225 56977 Hs.21958 NM_020225 HPRD:16823 STOX2 - storkhead box 2 protein-coding Atac153_MAPQ30_peak_2076 chr14 102404426 102404426 + 4.57314 NA Intergenic Intergenic -26439 NM_001376 1778 Hs.614080 NM_001376 HPRD:02524 DYNC1H1 DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein, cytoplasmic 1, heavy chain 1 protein-coding Atac153_MAPQ30_peak_817 chr10 80042590 80042590 + 4.57314 NA Intergenic Intergenic 15505 NR_073447 414243 Hs.55047 NR_073447 ENSG00000227136 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA Atac153_MAPQ30_peak_2381 chr16 8789278 8789278 + 4.57314 NA intron (NM_020686, intron 1 of 15) intron (NM_020686, intron 1 of 15) -17548 NM_000663 18 Hs.336768 NM_000663 HPRD:00661 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding Atac153_MAPQ30_peak_6425 chr8 96468136 96468136 + 4.57314 NA intron (NR_038207, intron 2 of 2) intron (NR_038207, intron 2 of 2) -186674 NM_177965 157657 Hs.548157 NM_177965 HPRD:14104 C8orf37 CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding Atac153_MAPQ30_peak_3827 chr2 200605200 200605200 + 4.57314 NA Intergenic Intergenic 110696 NR_034096 348751 Hs.734578 NR_034096 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like ncRNA Atac153_MAPQ30_peak_5743 chr6 106589978 106589978 + 4.57314 NA Intergenic Intergenic 43241 NM_182907 639 Hs.436023 NM_001198 HPRD:04572 PRDM1 BLIMP1|PRDI-BF1 PR domain containing 1, with ZNF domain protein-coding Atac153_MAPQ30_peak_1901 chr14 24843074 24843074 + 4.57314 NA intron (NM_001198967, intron 6 of 10) intron (NM_001198967, intron 6 of 10) 4715 NM_001288802 4776 Hs.77810 NM_004554 HPRD:09096 NFATC4 NF-AT3|NF-ATC4|NFAT3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 protein-coding Atac153_MAPQ30_peak_195 chr1 36553309 36553309 + 4.57314 NA intron (NM_014466, intron 8 of 9) intron (NM_014466, intron 8 of 9) -1144 NM_017825 54936 Hs.18021 NM_017825 HPRD:12432 ADPRHL2 ARH3 ADP-ribosylhydrolase like 2 protein-coding Atac153_MAPQ30_peak_5300 chr5 38265443 38265443 + 4.57314 NA intron (NM_001205301, intron 1 of 22) intron (NM_001205301, intron 1 of 22) 6932 NM_152403 133584 Hs.20103 NM_152403 HPRD:13433 EGFLAM AGRINL|AGRNL|PIKA EGF-like, fibronectin type III and laminin G domains protein-coding Atac153_MAPQ30_peak_3211 chr19 8043795 8043795 + 4.57314 NA intron (NM_001419, intron 3 of 5) intron (NM_001419, intron 3 of 5) 26734 NM_001419 1994 Hs.184492 NM_001419 HPRD:16025 ELAVL1 ELAV1|HUR|Hua|MelG ELAV like RNA binding protein 1 protein-coding Atac153_MAPQ30_peak_4186 chr20 57196362 57196362 + 4.57314 NA Intergenic MLT1C|LTR|ERVL-MaLR -13466 NR_125359 79160 Hs.280135 NR_125359 LOC79160 - uncharacterized LOC79160 ncRNA Atac153_MAPQ30_peak_5052 chr4 26000435 26000435 + 4.57314 NA Intergenic MIRb|SINE|MIR 84621 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52 small integral membrane protein 20 protein-coding Atac153_MAPQ30_peak_804 chr10 76789625 76789625 + 4.57314 NA exon (NM_001256468, exon 18 of 18) exon (NM_001256468, exon 18 of 18) 28647 NM_001003892 338599 Hs.535090 NM_001003892 HPRD:16846 DUPD1 DUSP27|FMDSP dual specificity phosphatase and pro isomerase domain containing 1 protein-coding Atac153_MAPQ30_peak_6274 chr8 10087134 10087134 + 4.57314 NA intron (NM_001135670, intron 2 of 4) intron (NM_001135670, intron 2 of 4) 134072 NM_001135671 4482 Hs.490981 NM_012331 HPRD:03152 MSRA PMSR methionine sulfoxide reductase A protein-coding Atac153_MAPQ30_peak_471 chr1 201346289 201346289 + 4.57314 NA intron (NM_001276347, intron 1 of 15) intron (NM_001276347, intron 1 of 15) 539 NM_001276346 7139 Hs.533613 NM_000364 HPRD:01844 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T type 2 (cardiac) protein-coding Atac153_MAPQ30_peak_2625 chr16 86816224 86816224 + 4.57314 NA Intergenic Intergenic 204109 NM_005250 2300 Hs.533830 NM_005250 HPRD:07219 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding Atac153_MAPQ30_peak_3713 chr2 128224126 128224126 + 4.57314 NA Intergenic Intergenic -42932 NR_039944 100616187 NR_039944 miRBase:MI0017428 MIR4783 - microRNA 4783 ncRNA Atac153_MAPQ30_peak_1624 chr12 108924055 108924055 + 4.57314 NA exon (NM_014706, exon 15 of 19) exon (NM_014706, exon 15 of 19) 15004 NM_007076 11153 Hs.661891 NM_007076 FICD HIP13|HYPE|UNQ3041 FIC domain containing protein-coding Atac153_MAPQ30_peak_870 chr10 98923718 98923718 + 4.57314 NA intron (NR_037909, intron 12 of 14) intron (NR_037909, intron 12 of 14) 21965 NM_003061 6585 Hs.632082 NM_003061 HPRD:04773 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit homolog 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_5742 chr6 100227493 100227493 + 4.57314 NA Intergenic L1PREC2|LINE|L1 172843 NM_021620 59336 Hs.287386 NM_021620 PRDM13 MU-MB-20.220|PFM10 PR domain containing 13 protein-coding Atac153_MAPQ30_peak_1853 chr13 100487800 100487800 + 4.57314 NA intron (NR_120421, intron 1 of 4) MLT1J|LTR|ERVL-MaLR -106545 NR_046525 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4382 chr22 28362701 28362701 + 4.57314 NA intron (NR_026963, intron 2 of 4) L1MEc|LINE|L1 -46101 NR_036169 100423034 NR_036169 miRBase:MI0014247 MIR3199-1 - microRNA 3199-1 ncRNA Atac153_MAPQ30_peak_2778 chr17 26109513 26109513 + 4.57314 NA intron (NM_000625, intron 6 of 26) intron (NM_000625, intron 6 of 26) 18042 NM_000625 4843 Hs.709191 NM_000625 HPRD:01225 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2, inducible protein-coding Atac153_MAPQ30_peak_3570 chr2 70873307 70873307 + 4.57314 NA Intergenic Intergenic -92160 NM_001099691 7039 Hs.170009 NM_003236 HPRD:07522 TGFA TFGA transforming growth factor, alpha protein-coding Atac153_MAPQ30_peak_4901 chr3 160108981 160108981 + 4.57314 NA intron (NM_001190241, intron 1 of 20) MER66A|LTR|ERV1 -7427 NM_001190242 57560 Hs.478095 NM_020800 HPRD:13853 IFT80 ATD2|SRTD2|WDR56 intraflagellar transport 80 protein-coding Atac153_MAPQ30_peak_2611 chr16 85420443 85420443 + 4.57314 NA Intergenic Intergenic -80512 NR_049816 100847022 NR_049816 miRBase:MI0017982 MIR5093 - microRNA 5093 ncRNA Atac153_MAPQ30_peak_2263 chr15 77398214 77398214 + 4.57314 NA Intergenic Intergenic -34644 NM_198902 10099 Hs.744863 NM_005724 HPRD:15512 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding Atac153_MAPQ30_peak_6697 chr9 94935941 94935941 + 4.57314 NA Intergenic L1MCa|LINE|L1 32192 NR_027341 158314 Hs.149940 NR_027341 LINC00475 C9orf44 long intergenic non-protein coding RNA 475 ncRNA Atac153_MAPQ30_peak_2942 chr17 75282542 75282542 + 4.57314 NA intron (NM_001293695, intron 1 of 10) intron (NM_001293695, intron 1 of 10) -1431 NM_001113492 10801 Hs.440932 NM_006640 HPRD:10360 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Atac153_MAPQ30_peak_4636 chr3 38783396 38783396 + 4.57314 NA intron (NM_001293307, intron 12 of 25) intron (NM_001293307, intron 12 of 25) 52105 NM_001293307 6336 Hs.250443 NM_006514 HPRD:09188 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium channel, voltage-gated, type X, alpha subunit protein-coding Atac153_MAPQ30_peak_1939 chr14 61577551 61577551 + 4.57314 NA Intergenic Intergenic 129586 NR_033344 145389 Hs.200738 NM_153811 HPRD:15382 SLC38A6 NAT-1 solute carrier family 38, member 6 protein-coding Atac153_MAPQ30_peak_932 chr10 120919046 120919046 + 4.57314 NA intron (NR_110305, intron 5 of 13) intron (NR_110305, intron 5 of 13) 6158 NM_213649 119559 Hs.655168 NM_178867 HPRD:18046 SFXN4 BCRM1|COXPD18 sideroflexin 4 protein-coding Atac153_MAPQ30_peak_1628 chr12 109761280 109761280 + 4.57314 NA Intergenic Intergenic -14255 NM_213596 121643 Hs.528316 NM_213596 HPRD:13550 FOXN4 - forkhead box N4 protein-coding Atac153_MAPQ30_peak_4109 chr20 41821918 41821918 + 4.57314 NA Intergenic MIRb|SINE|MIR -3361 NM_133170 11122 Hs.526879 NM_007050 HPRD:06690 PTPRT RPTPrho protein tyrosine phosphatase, receptor type, T protein-coding Atac153_MAPQ30_peak_1324 chr11 113771580 113771580 + 4.57314 NA Intergenic THE1D|LTR|ERVL-MaLR -3938 NM_006028 9177 Hs.241377 NM_006028 HPRD:06875 HTR3B 5-HT3B 5-hydroxytryptamine (serotonin) receptor 3B, ionotropic protein-coding Atac153_MAPQ30_peak_2145 chr15 42740552 42740552 + 4.57314 NA exon (NM_001284306, exon 2 of 18) exon (NM_001284306, exon 2 of 18) 9213 NM_022473 64397 Hs.511143 NM_022473 HPRD:10317 ZNF106 SH3BP3|ZFP106|ZNF474 zinc finger protein 106 protein-coding Atac153_MAPQ30_peak_2203 chr15 66548103 66548103 + 4.57314 NA Intergenic MIRb|SINE|MIR -2028 NM_032445 84465 Hs.712886 NM_032445 HPRD:14385 MEGF11 - multiple EGF-like-domains 11 protein-coding Atac153_MAPQ30_peak_5590 chr6 10697556 10697556 + 4.57314 NA intron (NM_017906, intron 1 of 9) intron (NM_017906, intron 1 of 9) 2368 NM_017906 55003 Hs.310231 NM_017906 HPRD:07424 PAK1IP1 MAK11|PIP1|WDR84|bA421M1.5|hPIP1 PAK1 interacting protein 1 protein-coding Atac153_MAPQ30_peak_6282 chr8 11354522 11354522 + 4.57314 NA intron (NM_001715, intron 1 of 12) intron (NM_001715, intron 1 of 12) 3001 NM_001715 640 Hs.146591 NM_001715 HPRD:01866 BLK MODY11 BLK proto-oncogene, Src family tyrosine kinase protein-coding Atac153_MAPQ30_peak_7010 chrX 46302478 46302478 + 4.57314 NA Intergenic Intergenic -4146 NM_001129899 55634 Hs.632800 NM_017776 HPRD:06530 KRBOX4 ZNF673 KRAB box domain containing 4 protein-coding Atac153_MAPQ30_peak_4668 chr3 48618640 48618640 + 4.57314 NA intron (NM_000094, intron 51 of 117) intron (NM_000094, intron 51 of 117) -2230 NR_031756 100313843 NR_031756 MIR711 hsa-mir-711 microRNA 711 ncRNA Atac153_MAPQ30_peak_3168 chr18 76779092 76779092 + 4.57314 NA Intergenic Intergenic 38817 NM_171999 27164 Hs.700557 NM_171999 SALL3 ZNF796 spalt-like transcription factor 3 protein-coding Atac153_MAPQ30_peak_4343 chr22 22298469 22298469 + 4.57314 NA intron (NM_014634, intron 2 of 7) intron (NM_014634, intron 2 of 7) 8781 NM_014634 9647 Hs.112728 NM_014634 HPRD:10163 PPM1F CAMKP|CaMKPase|FEM-2|POPX2|hFEM-2 protein phosphatase, Mg2+/Mn2+ dependent, 1F protein-coding Atac153_MAPQ30_peak_4778 chr3 101534371 101534371 + 4.57314 NA intron (NM_145037, intron 6 of 7) intron (NM_145037, intron 6 of 7) -12463 NM_001005474 64332 Hs.319171 NM_031419 HPRD:09217 NFKBIZ IKBZ|INAP|MAIL nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta protein-coding Atac153_MAPQ30_peak_2585 chr16 80695456 80695456 + 4.57314 NA intron (NM_152342, intron 2 of 6) MIRb|SINE|MIR -88751 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA Atac153_MAPQ30_peak_1542 chr12 57503999 57503999 + 4.57314 NA promoter-TSS (NM_001178079) promoter-TSS (NM_001178079) 90 NM_001178079 6778 Hs.524518 NM_003153 HPRD:03302 STAT6 D12S1644|IL-4-STAT|STAT6B|STAT6C signal transducer and activator of transcription 6, interleukin-4 induced protein-coding Atac153_MAPQ30_peak_1739 chr12 132081230 132081230 + 4.57314 NA Intergenic Intergenic -114402 NM_004592 6433 Hs.308171 NM_004592 HPRD:09055 SFSWAP SFRS8|SWAP splicing factor, suppressor of white-apricot family protein-coding Atac153_MAPQ30_peak_6617 chr9 35629774 35629774 + 4.57314 NA Intergenic Intergenic -11350 NM_001782 971 Hs.116481 NM_001782 HPRD:00118 CD72 CD72b|LYB2 CD72 molecule protein-coding Atac153_MAPQ30_peak_5683 chr6 42217932 42217932 + 4.57314 NA intron (NM_033502, intron 13 of 17) intron (NM_033502, intron 13 of 17) -32299 NM_018141 55173 Hs.380887 NM_018141 HPRD:14775 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding Atac153_MAPQ30_peak_5569 chr6 4948884 4948884 + 4.57314 NA intron (NR_026590, intron 7 of 8) MER20|DNA|hAT-Charlie 55413 NM_001286133 10799 Hs.511756 NM_006638 HPRD:09361 RPP40 RNASEP1|bA428J1.3 ribonuclease P/MRP 40kDa subunit protein-coding Atac153_MAPQ30_peak_1744 chr12 132519787 132519787 + 4.57314 NA intron (NM_015409, intron 30 of 52) intron (NM_015409, intron 30 of 52) 4018 NR_002979 677829 Hs.742405 NR_002979 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA Atac153_MAPQ30_peak_429 chr1 170642531 170642531 + 4.57314 NA intron (NM_006902, intron 1 of 4) intron (NM_006902, intron 1 of 4) 9218 NM_022716 5396 Hs.283416 NM_006902 HPRD:01337 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding Atac153_MAPQ30_peak_1041 chr11 2386072 2386072 + 4.57314 NA intron (NR_108080, intron 1 of 2) MER39|LTR|ERV1 -11335 NM_001297649 975 Hs.54457 NM_004356 HPRD:08924 CD81 CVID6|S5.7|TAPA1|TSPAN28 CD81 molecule protein-coding Atac153_MAPQ30_peak_333 chr1 113809667 113809667 + 4.57314 NA Intergenic L2a|LINE|L2 -60792 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA Atac153_MAPQ30_peak_3200 chr19 5037106 5037106 + 4.57314 NA intron (NM_015015, intron 3 of 22) CpG 67982 NM_015015 23030 Hs.654816 NM_015015 HPRD:11056 KDM4B JMJD2B|TDRD14B lysine (K)-specific demethylase 4B protein-coding Atac153_MAPQ30_peak_5864 chr6 169194586 169194586 + 4.57314 NA Intergenic Intergenic 352755 NM_001166412 64094 Hs.487200 NM_022138 HPRD:06244 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding Atac153_MAPQ30_peak_2394 chr16 11451261 11451261 + 4.57314 NA Intergenic MLT1E2|LTR|ERVL-MaLR 11950 NM_152308 116028 Hs.347524 NM_152308 HPRD:14497 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding Atac153_MAPQ30_peak_4151 chr20 49308798 49308798 + 4.57314 NA promoter-TSS (NM_001290268) promoter-TSS (NM_001290268) -731 NM_001290268 140876 Hs.372578 NM_080829 HPRD:12757 FAM65C C20orf175|C20orf176|dJ530I15.2|dJ530I15.3 family with sequence similarity 65, member C protein-coding Atac153_MAPQ30_peak_6856 chr9 138288980 138288980 + 4.57314 NA Intergenic Intergenic 53885 NM_173520 157927 Hs.559511 NM_173520 ENSG00000178243 C9orf62 - chromosome 9 open reading frame 62 protein-coding Atac153_MAPQ30_peak_5925 chr7 23674460 23674460 + 4.57314 NA intron (NM_138771, intron 3 of 3) LTR33A_|LTR|ERVL 37462 NM_138771 90693 Hs.232296 NM_138771 HPRD:14278 CCDC126 - coiled-coil domain containing 126 protein-coding Atac153_MAPQ30_peak_5835 chr6 161940281 161940281 + 4.57314 NA intron (NM_004562, intron 9 of 11) intron (NM_004562, intron 9 of 11) -245174 NM_020133 56895 Hs.353175 NM_020133 HPRD:12437 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding Atac153_MAPQ30_peak_4730 chr3 60522882 60522882 + 4.57314 NA intron (NM_001166243, intron 4 of 9) intron (NM_001166243, intron 4 of 9) 714251 NM_002012 2272 Hs.655995 NM_002012 HPRD:03096 FHIT AP3Aase|FRA3B fragile histidine triad protein-coding Atac153_MAPQ30_peak_402 chr1 158265312 158265312 + 4.57314 NA TTS (NM_001765) TTS (NM_001765) 5749 NM_001765 911 Hs.132448 NM_001765 HPRD:01772 CD1C BDCA1|CD1|CD1A|R7 CD1c molecule protein-coding Atac153_MAPQ30_peak_2454 chr16 26473122 26473122 + 4.57314 NA Intergenic Intergenic -605097 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding Atac153_MAPQ30_peak_1349 chr11 118968546 118968546 + 4.57314 NA intron (NM_001382, intron 6 of 8) intron (NM_001382, intron 6 of 8) -2369 NM_002105 3014 Hs.477879 NM_002105 HPRD:03465 H2AFX H2A.X|H2A/X|H2AX H2A histone family, member X protein-coding Atac153_MAPQ30_peak_4792 chr3 113958296 113958296 + 4.57314 NA Intergenic Intergenic -1871 NM_007136 7634 Hs.271079 NM_007136 HPRD:01932 ZNF80 pT17 zinc finger protein 80 protein-coding Atac153_MAPQ30_peak_2507 chr16 51436211 51436211 + 4.57314 NA Intergenic L2a|LINE|L2 -251028 NM_002968 6299 Hs.135787 NM_002968 HPRD:03742 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt-like transcription factor 1 protein-coding Atac153_MAPQ30_peak_6168 chr7 138818535 138818535 + 4.57314 NA promoter-TSS (NM_001144923) promoter-TSS (NM_001144923) 45 NM_001144923 79989 Hs.133020 NM_024926 HPRD:07776 TTC26 DYF13|dyf-13 tetratricopeptide repeat domain 26 protein-coding Atac153_MAPQ30_peak_2549 chr16 68721122 68721122 + 4.57314 NA intron (NM_001793, intron 11 of 15) intron (NM_001793, intron 11 of 15) 42971 NM_001793 1001 Hs.191842 NM_001793 HPRD:00227 CDH3 CDHP|HJMD|PCAD cadherin 3, type 1, P-cadherin (placental) protein-coding Atac153_MAPQ30_peak_2234 chr15 73150204 73150204 + 4.57314 NA Intergenic MLT1F2|LTR|ERVL-MaLR -74078 NM_031284 83440 Hs.654636 NM_031284 HPRD:12429 ADPGK 2610017G09Rik|ADP-GK ADP-dependent glucokinase protein-coding Atac153_MAPQ30_peak_5072 chr4 48180593 48180593 + 4.57314 NA intron (NM_003215, intron 2 of 17) intron (NM_003215, intron 2 of 17) -44320 NM_003328 7294 Hs.479669 NM_003328 HPRD:02505 TXK BTKL|PSCTK5|PTK4|RLK|TKL TXK tyrosine kinase protein-coding Atac153_MAPQ30_peak_1999 chr14 77336722 77336722 + 4.57314 NA TTS (NM_194287) TTS (NM_194287) 43997 NM_194287 145497 Hs.147276 NM_194287 HPRD:12621 LRRC74A C14orf166B|LRRC74 leucine rich repeat containing 74A protein-coding Atac153_MAPQ30_peak_4368 chr22 26626916 26626916 + 4.57314 NA intron (NM_021115, intron 1 of 16) L2a|LINE|L2 61476 NM_001184777 23544 Hs.194766 NM_021115 HPRD:08449 SEZ6L - seizure related 6 homolog (mouse)-like protein-coding Atac153_MAPQ30_peak_963 chr10 126342823 126342823 + 4.57314 NA intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -49774 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4972 chr4 3583744 3583744 + 4.57314 NA intron (NR_040045, intron 1 of 2) intron (NR_040045, intron 1 of 2) 5148 NR_040045 285492 Hs.145563 NM_173661 LINC00955 - long intergenic non-protein coding RNA 955 ncRNA Atac153_MAPQ30_peak_1734 chr12 130920740 130920740 + 4.57314 NA intron (NM_015347, intron 10 of 18) intron (NM_015347, intron 10 of 18) 81670 NM_015347 23504 Hs.657441 NM_015347 HPRD:17183 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding Atac153_MAPQ30_peak_6502 chr8 134568523 134568523 + 4.57314 NA intron (NM_173344, intron 1 of 9) MIRb|SINE|MIR 15660 NM_173344 6482 Hs.374257 NM_003033 HPRD:06219 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding Atac153_MAPQ30_peak_5334 chr5 73659619 73659619 + 4.57314 NA Intergenic MER115|DNA|hAT-Tip100 41308 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 - long intergenic non-protein coding RNA 1333 ncRNA Atac153_MAPQ30_peak_2280 chr15 80531196 80531196 + 4.57314 NA intron (NR_120317, intron 1 of 2) Tigger3|DNA|TcMar-Tigger 13407 NR_120317 100996492 Hs.20034 NR_120317 LINC01314 - long intergenic non-protein coding RNA 1314 ncRNA Atac153_MAPQ30_peak_1796 chr13 37121020 37121020 + 4.57314 NA Intergenic Intergenic 114611 NM_003914 8900 Hs.417050 NM_003914 HPRD:04946 CCNA1 CT146 cyclin A1 protein-coding Atac153_MAPQ30_peak_3687 chr2 120047709 120047709 + 4.57314 NA Intergenic Intergenic 66325 NM_018234 55240 Hs.647822 NM_018234 HPRD:10285 STEAP3 AHMIO2|STMP3|TSAP6|dudlin-2 STEAP family member 3, metalloreductase protein-coding Atac153_MAPQ30_peak_4496 chr22 47467818 47467818 + 4.57314 NA intron (NR_104292, intron 12 of 13) intron (NR_104292, intron 12 of 13) -155880 NR_122047 642757 Hs.632786 NR_122047 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5784 chr6 133718119 133718119 + 4.57314 NA intron (NM_001301013, intron 3 of 19) intron (NM_001301013, intron 3 of 19) 155482 NM_001301013 2070 Hs.596680 NM_004100 HPRD:04648 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding Atac153_MAPQ30_peak_3201 chr19 5341536 5341536 + 4.57314 NA promoter-TSS (NM_002850) promoter-TSS (NM_002850) -722 NM_130855 5802 Hs.744928 NM_002850 HPRD:03344 PTPRS PTPSIGMA protein tyrosine phosphatase, receptor type, S protein-coding Atac153_MAPQ30_peak_4393 chr22 30517970 30517970 + 4.57314 NA exon (NM_152510, exon 10 of 11) exon (NM_152510, exon 10 of 11) -41501 NR_110541 101929664 Hs.592197 NR_110541 ENSG00000227117 HORMAD2-AS1 MTMR3-AS1 HORMAD2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3021 chr18 13225180 13225180 + 4.57314 NA intron (NM_181482, intron 1 of 5) intron (NM_181482, intron 1 of 5) 6451 NM_181482 753 Hs.731853 NM_004338 HPRD:07358 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding Atac153_MAPQ30_peak_3422 chr2 12626840 12626840 + 4.57314 NA intron (NR_110196, intron 4 of 5) intron (NR_110196, intron 4 of 5) -230158 NR_027303 28951 Hs.467751 NM_021643 HPRD:18224 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding Atac153_MAPQ30_peak_3223 chr19 12589320 12589320 + 4.57314 NA intron (NM_152601, intron 1 of 3) HERVL74-int|LTR|ERVL 6312 NM_152601 163051 Hs.631623 NM_152601 HPRD:08236 ZNF709 - zinc finger protein 709 protein-coding Atac153_MAPQ30_peak_1322 chr11 113515344 113515344 + 4.57314 NA Intergenic Intergenic 61751 NR_110047 80975 Hs.46720 NM_030770 HPRD:05995 TMPRSS5 SPINESIN transmembrane protease, serine 5 protein-coding Atac153_MAPQ30_peak_5016 chr4 8907119 8907119 + 4.57314 NA Intergenic Intergenic -33576 NM_018942 3166 Hs.104134 NM_018942 HPRD:00873 HMX1 H6|NKX5-3 H6 family homeobox 1 protein-coding Atac153_MAPQ30_peak_6657 chr9 83889078 83889078 + 4.57314 NA Intergenic Intergenic 414518 NM_005077 7088 Hs.197320 NM_005077 HPRD:02557 TLE1 ESG|ESG1|GRG1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) protein-coding Atac153_MAPQ30_peak_1898 chr14 23772560 23772560 + 4.57314 NA promoter-TSS (NM_001276318) promoter-TSS (NM_001276318) -503 NM_001276318 90673 Hs.601513 NM_001276318 ENSG00000235194 PPP1R3E - protein phosphatase 1, regulatory subunit 3E protein-coding Atac153_MAPQ30_peak_1229 chr11 65773933 65773933 + 4.57314 NA Intergenic Intergenic -4296 NM_001242484 84285 Hs.425178 NM_032325 HPRD:14411 EIF1AD haponin eukaryotic translation initiation factor 1A domain containing protein-coding Atac153_MAPQ30_peak_1394 chr11 130785410 130785410 + 4.57314 NA exon (NM_014758, exon 1 of 11) exon (NM_014758, exon 1 of 11) 972 NM_014758 399979 Hs.444024 NM_014758 HPRD:18621 SNX19 CHET8 sorting nexin 19 protein-coding Atac153_MAPQ30_peak_5975 chr7 41510043 41510043 + 4.57314 NA Intergenic Intergenic -223471 NR_027118 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6976 chrX 35729619 35729619 + 4.57314 NA Intergenic Intergenic -86840 NM_001099921 139604 Hs.700562 NM_001099921 ENSG00000189023 MAGEB16 - melanoma antigen family B, 16 protein-coding Atac153_MAPQ30_peak_5512 chr5 175223186 175223186 + 4.57314 NA promoter-TSS (NM_006650) promoter-TSS (NM_006650) -424 NM_006650 10814 Hs.193235 NM_006650 HPRD:09234 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding Atac153_MAPQ30_peak_6626 chr9 37958083 37958083 + 4.57314 NA intron (NM_003028, intron 3 of 5) L1MC1|LINE|L1 -53733 NR_024873 92014 Hs.634120 NM_033412 HPRD:14370 SLC25A51 CG7943|MCART1 solute carrier family 25, member 51 protein-coding Atac153_MAPQ30_peak_4325 chr21 47168461 47168461 + 4.57314 NA Intergenic Intergenic 87872 NR_038876 100129027 Hs.689591 NR_038876 ENSG00000205424 LOC100129027 - uncharacterized LOC100129027 ncRNA Atac153_MAPQ30_peak_3142 chr18 72087416 72087416 + 4.57314 NA Intergenic Intergenic 37087 NM_001044369 125704 Hs.371690 NM_001044369 ENSG00000187773 FAM69C C18orf51 family with sequence similarity 69, member C protein-coding Atac153_MAPQ30_peak_5510 chr5 174759365 174759365 + 4.57314 NA Intergenic Intergenic 111798 NM_000794 1812 Hs.2624 NM_000794 HPRD:00538 DRD1 DADR|DRD1A dopamine receptor D1 protein-coding Atac153_MAPQ30_peak_5231 chr5 4289228 4289228 + 4.57314 NA Intergenic Intergenic -484366 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LOC101929153 - uncharacterized LOC101929153 ncRNA Atac153_MAPQ30_peak_1887 chr13 114801506 114801506 + 4.57314 NA intron (NM_007368, intron 4 of 23) intron (NM_007368, intron 4 of 23) 96589 NM_007368 22821 Hs.593075 NM_007368 HPRD:05537 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding Atac153_MAPQ30_peak_288 chr1 75684114 75684114 + 4.57314 NA intron (NM_001130058, intron 17 of 23) intron (NM_001130058, intron 17 of 23) 83547 NM_001256114 431707 Hs.403934 NM_001001933 HPRD:17275 LHX8 LHX7 LIM homeobox 8 protein-coding Atac153_MAPQ30_peak_1144 chr11 35450429 35450429 + 4.57314 NA Intergenic MLT2F|LTR|ERVL -8819 NM_001195728 6506 Hs.502338 NM_004171 HPRD:02625 SLC1A2 EAAT2|GLT-1 solute carrier family 1 (glial high affinity glutamate transporter), member 2 protein-coding Atac153_MAPQ30_peak_2978 chr17 80842241 80842241 + 4.57314 NA intron (NM_005993, intron 15 of 38) intron (NM_005993, intron 15 of 38) -44310 NM_024702 79755 Hs.464391 NM_024702 HPRD:08588 ZNF750 ZFP750 zinc finger protein 750 protein-coding Atac153_MAPQ30_peak_7242 chrX 140711763 140711763 + 4.57314 NA intron (NR_037183, intron 4 of 4) MLT1A1|LTR|ERVL-MaLR 33928 NM_145662 728712 Hs.334464 NM_145662 SPANXA2 CT11.1|SPANX|SPANX-A|SPANXA SPANX family, member A2 protein-coding Atac153_MAPQ30_peak_5160 chr4 147668279 147668279 + 4.57314 NA intron (NM_001300761, intron 12 of 13) L1M2a|LINE|L1 108234 NM_004575 5458 Hs.266 NM_004575 HPRD:00220 POU4F2 BRN3.2|BRN3B|Brn-3b POU class 4 homeobox 2 protein-coding Atac153_MAPQ30_peak_5778 chr6 126732688 126732688 + 4.57314 NA intron (NR_104462, intron 2 of 3) L1M2a|LINE|L1 71753 NM_001286525 387103 Hs.486401 NM_001012507 HPRD:16660 CENPW C6orf173|CENP-W|CUG2 centromere protein W protein-coding Atac153_MAPQ30_peak_4412 chr22 33392447 33392447 + 4.57314 NA intron (NM_001135774, intron 2 of 13) MIRc|SINE|MIR 10359 NM_133633 8224 Hs.608750 NM_003490 HPRD:04083 SYN3 - synapsin III protein-coding Atac153_MAPQ30_peak_5968 chr7 36667335 36667335 + 4.57314 NA intron (NM_001177506, intron 6 of 21) intron (NM_001177506, intron 6 of 21) -27609 NR_046764 100874264 Hs.690994 NR_046764 AOAH-IT1 - AOAH intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_3169 chr18 76889190 76889190 + 4.57314 NA intron (NM_198531, intron 5 of 29) L1MB4|LINE|L1 59793 NM_198531 374868 Hs.465475 NM_198531 HPRD:16528 ATP9B ATPASEP|ATPIIB|NEO1L|hMMR1 ATPase, class II, type 9B protein-coding Atac153_MAPQ30_peak_5669 chr6 40288500 40288500 + 4.57314 NA Intergenic Intergenic 35245 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA Atac153_MAPQ30_peak_598 chr1 235125549 235125549 + 4.57314 NA Intergenic AluJo|SINE|Alu 165703 NR_002956 677802 Hs.744743 NR_002956 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA Atac153_MAPQ30_peak_5659 chr6 37450272 37450272 + 4.57314 NA TTS (NM_015050) TTS (NM_015050) 17428 NM_138493 154467 Hs.284207 NM_138493 HPRD:18561 CCDC167 C6orf129|HSPC265 coiled-coil domain containing 167 protein-coding Atac153_MAPQ30_peak_779 chr10 70812148 70812148 + 4.57314 NA Intergenic Intergenic -35680 NM_002727 5552 Hs.1908 NM_002727 HPRD:01513 SRGN PPG|PRG|PRG1 serglycin protein-coding Atac153_MAPQ30_peak_4737 chr3 64356722 64356722 + 4.57314 NA Intergenic MIR|SINE|MIR -145591 NM_198859 166336 Hs.148105 NM_198859 HPRD:16342 PRICKLE2 EPM5 prickle homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_6808 chr9 129079275 129079275 + 4.57314 NA Intergenic MER50|LTR|ERV1 -9848 NM_001011703 89853 Hs.162659 NM_033446 HPRD:12952 MVB12B C9orf28|FAM125B multivesicular body subunit 12B protein-coding Atac153_MAPQ30_peak_3363 chr19 58930140 58930140 + 4.57314 NA TTS (NM_173548) TTS (NM_173548) 10077 NM_173548 201514 Hs.439551 NM_173548 HPRD:15861 ZNF584 - zinc finger protein 584 protein-coding Atac153_MAPQ30_peak_5885 chr7 1444690 1444690 + 4.57314 NA Intergenic Intergenic 54419 NM_182924 79778 Hs.376617 NM_024723 HPRD:11364 MICALL2 JRAB|MICAL-L2 MICAL-like 2 protein-coding Atac153_MAPQ30_peak_859 chr10 92862859 92862859 + 4.57314 NA Intergenic L2a|LINE|L2 49978 NR_002779 119369 Hs.441287 NR_002779 NUDT9P1 C10orf98|bA56M3.1 nudix (nucleoside diphosphate linked moiety X)-type motif 9 pseudogene 1 pseudo Atac153_MAPQ30_peak_1212 chr11 63776373 63776373 + 4.57314 NA intron (NM_014067, intron 4 of 10) intron (NM_014067, intron 4 of 10) 23048 NM_017670 55611 Hs.473788 NM_017670 OTUB1 OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding Atac153_MAPQ30_peak_2777 chr17 26056969 26056969 + 4.57314 NA Intergenic Intergenic 70586 NM_000625 4843 Hs.709191 NM_000625 HPRD:01225 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2, inducible protein-coding Atac153_MAPQ30_peak_3659 chr2 106593960 106593960 + 4.57314 NA Intergenic MLT1F1-int|LTR|ERVL-MaLR -88153 NM_032411 84417 Hs.43125 NM_032411 HPRD:13261 C2orf40 ECRG4 chromosome 2 open reading frame 40 protein-coding Atac153_MAPQ30_peak_2102 chr15 25960456 25960456 + 4.57314 NA intron (NM_024490, intron 9 of 20) intron (NM_024490, intron 9 of 20) 133516 NR_039865 100616474 NR_039865 MIR4715 - microRNA 4715 ncRNA Atac153_MAPQ30_peak_7160 chrX 109692485 109692485 + 4.57314 NA intron (NM_020769, intron 2 of 3) MIRb|SINE|MIR -9024 NM_001171689 9949 Hs.656243 NM_015365 HPRD:02182 AMMECR1 AMMERC1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 protein-coding Atac153_MAPQ30_peak_6639 chr9 75301559 75301559 + 4.57314 NA intron (NM_138691, intron 5 of 23) intron (NM_138691, intron 5 of 23) 164842 NM_138691 117531 Hs.670211 NM_138691 HPRD:05988 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel-like 1 protein-coding Atac153_MAPQ30_peak_794 chr10 73096385 73096385 + 4.57314 NA intron (NR_033414, intron 2 of 3) L2|LINE|L2 17375 NM_018344 55315 Hs.438419 NM_018344 HPRD:11570 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 (equilibrative nucleoside transporter), member 3 protein-coding Atac153_MAPQ30_peak_4884 chr3 140997265 140997265 + 4.57314 NA exon (NM_001037172, exon 3 of 6) exon (NM_001037172, exon 3 of 6) -45790 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding Atac153_MAPQ30_peak_4520 chr22 49686510 49686510 + 4.57314 NA Intergenic Intergenic 364680 NR_110522 348645 Hs.133159 NM_198851 HPRD:14180 C22orf34 - chromosome 22 open reading frame 34 protein-coding Atac153_MAPQ30_peak_6063 chr7 75698055 75698055 + 4.57314 NA Intergenic Intergenic 20718 NM_005918 4191 Hs.520967 NM_005918 HPRD:01099 MDH2 M-MDH|MDH|MGC:3559|MOR1 malate dehydrogenase 2, NAD (mitochondrial) protein-coding Atac153_MAPQ30_peak_7003 chrX 41118459 41118459 + 4.57314 NA Intergenic AluJo|SINE|Alu -74192 NM_001356 1654 Hs.743263 NM_001356 HPRD:02154 DDX3X DBX|DDX14|DDX3|HLP2 DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked protein-coding Atac153_MAPQ30_peak_4946 chr3 194002120 194002120 + 4.57314 NA Intergenic MIR3|SINE|MIR 28473 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 - long intergenic non-protein coding RNA 887 ncRNA Atac153_MAPQ30_peak_3760 chr2 136862050 136862050 + 4.57314 NA Intergenic Intergenic 11763 NM_001008540 7852 Hs.593413 NM_003467 HPRD:01217 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM chemokine (C-X-C motif) receptor 4 protein-coding Atac153_MAPQ30_peak_2543 chr16 67943542 67943542 + 4.57314 NA exon (NM_006742, exon 2 of 3) exon (NM_006742, exon 2 of 3) 16367 NM_006742 5681 Hs.513683 NM_006742 HPRD:01511 PSKH1 - protein serine kinase H1 protein-coding Atac153_MAPQ30_peak_4399 chr22 30776964 30776964 + 4.57314 NA intron (NM_001017981, intron 5 of 8) intron (NM_001017981, intron 5 of 8) -3070 NR_046312 85371 Hs.505597 NR_046312 KIAA1656 - KIAA1656 protein ncRNA Atac153_MAPQ30_peak_610 chr1 242989768 242989768 + 4.57314 NA Intergenic Intergenic 275278 NR_029401 731275 Hs.722350 NR_029401 LINC01347 - long intergenic non-protein coding RNA 1347 ncRNA Atac153_MAPQ30_peak_4025 chr20 21480188 21480188 + 4.57314 NA Intergenic MER3|DNA|hAT-Charlie 14476 NM_002509 4821 Hs.516922 NM_002509 HPRD:05213 NKX2-2 NKX2.2|NKX2B NK2 homeobox 2 protein-coding Atac153_MAPQ30_peak_6110 chr7 112442659 112442659 + 4.57314 NA Intergenic HERVL32-int|LTR|ERVL -12181 NR_109840 64418 Hs.606345 NM_022484 TMEM168 - transmembrane protein 168 protein-coding Atac153_MAPQ30_peak_484 chr1 203112384 203112384 + 4.57314 NA intron (NM_001048230, intron 2 of 2) MLT1A|LTR|ERVL-MaLR 15548 NM_001048230 134 Hs.77867 NM_000674 HPRD:00042 ADORA1 RDC7 adenosine A1 receptor protein-coding Atac153_MAPQ30_peak_1629 chr12 109979252 109979252 + 4.57314 NA Intergenic MIR|SINE|MIR 32106 NM_052845 326625 Hs.12106 NM_052845 HPRD:07398 MMAB ATR|CFAP23|cblB|cob methylmalonic aciduria (cobalamin deficiency) cblB type protein-coding Atac153_MAPQ30_peak_106 chr1 17919761 17919761 + 4.57314 NA intron (NM_001011722, intron 3 of 26) MIRc|SINE|MIR 12713 NM_001011722 55160 Hs.443460 NM_018125 HPRD:07679 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding Atac153_MAPQ30_peak_3533 chr2 48320830 48320830 + 4.57314 NA Intergenic Intergenic -187898 NM_001190274 80204 Hs.352677 NM_012167 HPRD:06985 FBXO11 FBX11|PRMT9|UBR6|VIT1 F-box protein 11 protein-coding Atac153_MAPQ30_peak_7171 chrX 115438867 115438867 + 4.57314 NA Intergenic L1MA2|LINE|L1 -128880 NM_007231 11254 Hs.522109 NM_007231 HPRD:02344 SLC6A14 BMIQ11 solute carrier family 6 (amino acid transporter), member 14 protein-coding Atac153_MAPQ30_peak_511 chr1 207979795 207979795 + 4.57314 NA Intergenic Intergenic -3927 NR_029518 407025 NR_029518 miRBase:MI0000107 MIR29B2 MIRN29B2|mir-29b-2 microRNA 29b-2 ncRNA Atac153_MAPQ30_peak_2146 chr15 43759764 43759764 + 4.57314 NA intron (NM_001141979, intron 11 of 27) intron (NM_001141979, intron 11 of 27) 25590 NM_001141980 7158 Hs.440968 NM_005657 HPRD:05569 TP53BP1 53BP1|p202 tumor protein p53 binding protein 1 protein-coding Atac153_MAPQ30_peak_1726 chr12 130023302 130023302 + 4.57314 NA intron (NM_133448, intron 2 of 8) MER44D|DNA|TcMar-Tigger 330156 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 LOC101927735 - uncharacterized LOC101927735 ncRNA Atac153_MAPQ30_peak_392 chr1 156740761 156740761 + 4.57314 NA intron (NM_005973, intron 1 of 6) L2c|LINE|L2 3487 NM_005973 5546 Hs.516948 NM_005973 HPRD:01562 PRCC RCCP1|TPRC papillary renal cell carcinoma (translocation-associated) protein-coding Atac153_MAPQ30_peak_1778 chr13 27757375 27757375 + 4.57314 NA non-coding (NR_046548, exon 2 of 2) non-coding (NR_046548, exon 2 of 2) 10979 NR_046548 100874071 Hs.735400 NR_046548 USP12-AS2 - USP12 antisense RNA 2 (head to head) ncRNA Atac153_MAPQ30_peak_7250 chrX 142842260 142842260 + 4.57314 NA Intergenic L1M2a|LINE|L1 -38498 NM_001009615 494119 NM_001009615 HPRD:18091 SPANXN2 CT11.7|SPANX-N2 SPANX family, member N2 protein-coding Atac153_MAPQ30_peak_399 chr1 157380907 157380907 + 4.57314 NA Intergenic Intergenic 141403 NM_031281 83416 Hs.415950 NM_031281 HPRD:16169 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor-like 5 protein-coding Atac153_MAPQ30_peak_2509 chr16 52635651 52635651 + 4.57314 NA intron (NR_033920, intron 1 of 3) intron (NR_033920, intron 1 of 3) 5236 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility candidate 16 (non-protein coding) ncRNA Atac153_MAPQ30_peak_1718 chr12 129004613 129004613 + 4.57314 NA intron (NM_001136103, intron 2 of 8) intron (NM_001136103, intron 2 of 8) 225976 NR_037406 100500817 NR_037406 MIR3612 - microRNA 3612 ncRNA Atac153_MAPQ30_peak_6315 chr8 22972181 22972181 + 4.57314 NA exon (NM_003841, exon 3 of 5) exon (NM_003841, exon 3 of 5) 11854 NM_003841 8794 Hs.655801 NM_003841 HPRD:04681 TNFRSF10C CD263|DCR1|DCR1-TNFR|LIT|TRAIL-R3|TRAILR3|TRID tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain protein-coding Atac153_MAPQ30_peak_3460 chr2 25492839 25492839 + 4.57314 NA intron (NM_175629, intron 6 of 22) intron (NM_175629, intron 6 of 22) -17655 NM_153759 1788 Hs.515840 NM_022552 HPRD:04141 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA (cytosine-5-)-methyltransferase 3 alpha protein-coding Atac153_MAPQ30_peak_3556 chr2 65234523 65234523 + 4.57314 NA intron (NM_003038, intron 3 of 7) L2a|LINE|L2 18028 NM_003038 6509 Hs.654352 NM_003038 HPRD:02576 SLC1A4 ASCT1|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 protein-coding Atac153_MAPQ30_peak_518 chr1 210433757 210433757 + 4.57314 NA Intergenic Intergenic -26291 NR_024337 574036 Hs.446946 NR_024337 ENSG00000203706 SERTAD4-AS1 C1orf133 SERTAD4 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5746 chr6 107913973 107913973 + 4.57314 NA intron (NM_018013, intron 5 of 6) intron (NM_018013, intron 5 of 6) 102656 NM_018013 55084 Hs.445244 NM_018013 HPRD:07650 SOBP JXC1|MRAMS sine oculis binding protein homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_139 chr1 23104852 23104852 + 4.57314 NA intron (NM_004442, intron 1 of 15) MIR3|SINE|MIR 58842 NR_039832 100616391 NR_039832 MIR4684 - microRNA 4684 ncRNA Atac153_MAPQ30_peak_3224 chr19 12785135 12785135 + 4.57314 NA intron (NR_029375, intron 10 of 10) L2b|LINE|L2 4618 NM_032332 84292 Hs.657204 NM_032332 HPRD:14730 WDR83 MORG1 WD repeat domain 83 protein-coding Atac153_MAPQ30_peak_3451 chr2 23171246 23171246 + 4.57314 NA Intergenic Intergenic 411895 NR_110577 102723362 Hs.502887 NR_110577 LOC102723362 - uncharacterized LOC102723362 ncRNA Atac153_MAPQ30_peak_4335 chr22 18432134 18432134 + 4.57314 NA intron (NM_015241, intron 1 of 31) MIRb|SINE|MIR 31593 NR_030378 693233 NR_030378 miRBase:MI0003663 MIR648 MIRN648|hsa-mir-648 microRNA 648 ncRNA Atac153_MAPQ30_peak_3918 chr2 235694507 235694507 + 4.57314 NA Intergenic Intergenic -166121 NM_014521 23677 Hs.516777 NM_014521 HPRD:09285 SH3BP4 BOG25|TTP SH3-domain binding protein 4 protein-coding Atac153_MAPQ30_peak_3589 chr2 76807172 76807172 + 4.57314 NA Intergenic LTR33A|LTR|ERVL -405919 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA Atac153_MAPQ30_peak_6720 chr9 98826499 98826499 + 4.57314 NA Intergenic Intergenic -1622 NR_033838 158435 Hs.652615 NR_033838 LOC158435 - uncharacterized LOC158435 ncRNA Atac153_MAPQ30_peak_2665 chr17 3544298 3544298 + 4.57314 NA intron (NM_001031681, intron 3 of 12) intron (NM_001031681, intron 3 of 12) 4536 NM_004937 1497 Hs.187667 NM_004937 HPRD:05885 CTNS CTNS-LSB|PQLC4 cystinosin, lysosomal cystine transporter protein-coding Atac153_MAPQ30_peak_6158 chr7 134873915 134873915 + 4.57314 NA intron (NM_014149, intron 12 of 14) intron (NM_014149, intron 12 of 14) 17915 NR_106764 102465254 NR_106764 MIR6509 hsa-mir-6509 microRNA 6509 ncRNA Atac153_MAPQ30_peak_2264 chr15 77540515 77540515 + 4.57314 NA intron (NM_024776, intron 4 of 7) AluJr|SINE|Alu -22769 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA Atac153_MAPQ30_peak_933 chr10 121119835 121119835 + 4.57314 NA intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -17649 NR_039829 100616398 NR_039829 MIR4681 - microRNA 4681 ncRNA Atac153_MAPQ30_peak_6579 chr9 5114468 5114468 + 4.57314 NA intron (NM_004972, intron 22 of 24) intron (NM_004972, intron 22 of 24) 71150 NM_007179 11172 Hs.632648 NM_007179 HPRD:08401 INSL6 RIF1 insulin-like 6 protein-coding Atac153_MAPQ30_peak_4731 chr3 60628264 60628264 + 4.57314 NA intron (NM_001166243, intron 4 of 9) intron (NM_001166243, intron 4 of 9) 608869 NM_002012 2272 Hs.655995 NM_002012 HPRD:03096 FHIT AP3Aase|FRA3B fragile histidine triad protein-coding Atac153_MAPQ30_peak_7048 chrX 57704497 57704497 + 4.57314 NA Intergenic Intergenic 86228 NM_007157 158586 Hs.156257 NM_007157 HPRD:11777 ZXDB ZNF905|dJ83L6.1 zinc finger, X-linked, duplicated B protein-coding Atac153_MAPQ30_peak_1662 chr12 115231736 115231736 + 4.57314 NA Intergenic MIR|SINE|MIR -109767 NM_005996 6926 Hs.744016 NM_005996 HPRD:03373 TBX3 TBX3-ISO|UMS|XHL T-box 3 protein-coding Atac153_MAPQ30_peak_3405 chr2 9944699 9944699 + 4.57314 NA Intergenic MLT1A0|LTR|ERVL-MaLR -38872 NM_005680 9014 Hs.584833 NM_005680 HPRD:05363 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa protein-coding Atac153_MAPQ30_peak_123 chr1 20615239 20615239 + 4.57314 NA Intergenic Intergenic -2173 NM_001039500 127731 Hs.205178 NM_144623 HPRD:08732 VWA5B1 - von Willebrand factor A domain containing 5B1 protein-coding Atac153_MAPQ30_peak_2647 chr17 643838 643838 + 4.57314 NA exon (NM_024792, exon 4 of 5) exon (NM_024792, exon 4 of 5) 7991 NM_024792 79850 Hs.154396 NM_024792 HPRD:13096 FAM57A CT120 family with sequence similarity 57, member A protein-coding Atac153_MAPQ30_peak_563 chr1 228501358 228501358 + 4.57314 NA intron (NM_001271223, intron 60 of 115) intron (NM_001271223, intron 60 of 115) 83452 NR_106800 102465444 NR_106800 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA Atac153_MAPQ30_peak_1879 chr13 112981406 112981406 + 4.57314 NA Intergenic MER6|DNA|TcMar-Tigger -49245 NM_145248 122258 Hs.97592 NM_145248 HPRD:14022 SPACA7 C13orf28 sperm acrosome associated 7 protein-coding Atac153_MAPQ30_peak_7114 chrX 81474288 81474288 + 4.57314 NA Intergenic L1PA13|LINE|L1 -1016847 NM_030763 79366 Hs.282204 NM_030763 HPRD:02310 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding Atac153_MAPQ30_peak_2548 chr16 68712284 68712284 + 4.57314 NA intron (NM_001793, intron 4 of 15) intron (NM_001793, intron 4 of 15) 34133 NM_001793 1001 Hs.191842 NM_001793 HPRD:00227 CDH3 CDHP|HJMD|PCAD cadherin 3, type 1, P-cadherin (placental) protein-coding Atac153_MAPQ30_peak_4746 chr3 67519530 67519530 + 4.57314 NA intron (NM_003848, intron 9 of 10) L2c|LINE|L2 185508 NM_003848 8801 Hs.644919 NM_003848 HPRD:06799 SUCLG2 GBETA succinate-CoA ligase, GDP-forming, beta subunit protein-coding Atac153_MAPQ30_peak_2783 chr17 27076442 27076442 + 4.57314 NA exon (NM_004295, exon 7 of 7) exon (NM_004295, exon 7 of 7) 5419 NM_004295 9618 Hs.8375 NM_004295 HPRD:03915 TRAF4 CART1|MLN62|RNF83 TNF receptor-associated factor 4 protein-coding Atac153_MAPQ30_peak_4516 chr22 49441830 49441830 + 4.57314 NA Intergenic Intergenic 179248 NR_038944 100128946 Hs.535676 NR_038944 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA Atac153_MAPQ30_peak_4359 chr22 24546718 24546718 + 4.57314 NA intron (NM_012295, intron 29 of 36) intron (NM_012295, intron 29 of 36) -30726 NM_019601 56241 Hs.131819 NM_019601 HPRD:18132 SUSD2 BK65A6.2 sushi domain containing 2 protein-coding Atac153_MAPQ30_peak_1985 chr14 74967408 74967408 + 4.57314 NA 3' UTR (NM_000428, exon 36 of 36) 3' UTR (NM_000428, exon 36 of 36) 6985 NM_194279 122961 Hs.291079 NM_194279 ISCA2 HBLD1|ISA2|c14_5557 iron-sulfur cluster assembly 2 protein-coding Atac153_MAPQ30_peak_1956 chr14 65510000 65510000 + 4.57314 NA intron (NM_001202558, intron 9 of 12) intron (NM_001202558, intron 9 of 12) -1406 NR_039855 100616490 NR_039855 MIR4706 - microRNA 4706 ncRNA Atac153_MAPQ30_peak_6120 chr7 127222142 127222142 + 4.57314 NA exon (NM_024523, exon 2 of 2) exon (NM_024523, exon 2 of 2) 3512 NM_024523 79571 Hs.521168 NM_024523 HPRD:07599 GCC1 GCC1P|GCC88 GRIP and coiled-coil domain containing 1 protein-coding Atac153_MAPQ30_peak_1500 chr12 45699704 45699704 + 4.57314 NA intron (NM_001142678, intron 2 of 19) intron (NM_001142678, intron 2 of 19) 13238 NM_001142678 196527 Hs.505339 NM_001025356 HPRD:18746 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding Atac153_MAPQ30_peak_6301 chr8 20770423 20770423 + 4.57314 NA Intergenic Intergenic -61074 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LOC286114 - uncharacterized LOC286114 ncRNA Atac153_MAPQ30_peak_4672 chr3 49039088 49039088 + 4.57314 NA intron (NM_177938, intron 3 of 8) intron (NM_177938, intron 3 of 8) -5549 NM_018031 11180 Hs.654815 NM_018031 HPRD:06912 WDR6 - WD repeat domain 6 protein-coding Atac153_MAPQ30_peak_553 chr1 226822242 226822242 + 4.57314 NA 3' UTR (NM_002221, exon 8 of 8) 3' UTR (NM_002221, exon 8 of 8) 40527 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_3952 chr2 240472568 240472568 + 4.57314 NA Intergenic Intergenic -149925 NM_006037 9759 Hs.20516 NM_006037 HPRD:05610 HDAC4 AHO3|BDMR|HA6116|HD4|HDAC-4|HDAC-A|HDACA histone deacetylase 4 protein-coding Atac153_MAPQ30_peak_2566 chr16 72048186 72048186 + 4.57314 NA intron (NM_001361, intron 2 of 8) MER5A|DNA|hAT-Charlie 5543 NM_001361 1723 Hs.654427 NM_001361 HPRD:00521 DHODH DHOdehase|POADS|URA1 dihydroorotate dehydrogenase (quinone) protein-coding Atac153_MAPQ30_peak_1586 chr12 95327934 95327934 + 4.57314 NA Intergenic Intergenic 69555 NM_018838 55967 Hs.506374 NM_018838 HPRD:16781 NDUFA12 B17.2|DAP13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 protein-coding Atac153_MAPQ30_peak_4480 chr22 46001812 46001812 + 4.57314 NA Intergenic Intergenic -65866 NM_001167621 25814 Hs.475125 NM_013236 HPRD:04624 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding Atac153_MAPQ30_peak_2636 chr16 88455994 88455994 + 4.57314 NA Intergenic L1MB7|LINE|L1 -37885 NM_001127464 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding Atac153_MAPQ30_peak_3403 chr2 9296074 9296074 + 4.57314 NA Intergenic MER63B|DNA|hAT-Blackjack -50820 NM_001135191 8853 Hs.555902 NM_003887 HPRD:04820 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding Atac153_MAPQ30_peak_4288 chr21 41295685 41295685 + 4.57314 NA intron (NM_006198, intron 2 of 2) intron (NM_006198, intron 2 of 2) 56338 NM_006198 5121 Hs.80296 NM_006198 HPRD:03378 PCP4 PEP-19 Purkinje cell protein 4 protein-coding Atac153_MAPQ30_peak_403 chr1 159021544 159021544 + 4.57314 NA exon (NM_005531, exon 9 of 11) exon (NM_005531, exon 9 of 11) 25103 NM_004833 9447 Hs.733411 NM_004833 HPRD:05202 AIM2 PYHIN4 absent in melanoma 2 protein-coding Atac153_MAPQ30_peak_3633 chr2 97599285 97599285 + 4.57314 NA intron (NM_001122646, intron 8 of 16) intron (NM_001122646, intron 8 of 16) 14442 NR_110209 101927053 Hs.677537 NR_110209 LOC101927053 - uncharacterized LOC101927053 ncRNA Atac153_MAPQ30_peak_2274 chr15 79319914 79319914 + 4.57314 NA intron (NM_002891, intron 9 of 27) intron (NM_002891, intron 9 of 27) -21912 NM_153815 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein-specific guanine nucleotide-releasing factor 1 protein-coding Atac153_MAPQ30_peak_3003 chr18 8286132 8286132 + 4.57314 NA intron (NM_001105244, intron 19 of 32) intron (NM_001105244, intron 19 of 32) 80900 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA Atac153_MAPQ30_peak_7129 chrX 96177975 96177975 + 4.50346 NA intron (NM_007309, intron 9 of 26) intron (NM_007309, intron 9 of 26) 39068 NM_013347 29935 Hs.659349 NM_013347 HPRD:06591 RPA4 HSU24186 replication protein A4, 30kDa protein-coding Atac153_MAPQ30_peak_4604 chr3 31137955 31137955 + 4.50346 NA Intergenic Intergenic -201802 NM_207359 339896 Hs.657052 NM_207359 HPRD:13557 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase-like 1 protein-coding Atac153_MAPQ30_peak_5356 chr5 92481622 92481622 + 4.50346 NA Intergenic Intergenic 425427 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5381 chr5 116634760 116634760 + 4.50346 NA Intergenic Intergenic -116448 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA Atac153_MAPQ30_peak_5336 chr5 75175525 75175525 + 4.50346 NA Intergenic MSTB-int|LTR|ERVL-MaLR -162212 NM_001099271 134359 Hs.432726 NM_152408 HPRD:08188 POC5 C5orf37 POC5 centriolar protein protein-coding Atac153_MAPQ30_peak_606 chr1 238288222 238288222 + 4.50346 NA Intergenic L1MC4|LINE|L1 -234000 NM_021186 57829 Hs.136241 NM_021186 ZP4 ZBP|ZP1|ZPB|Zp-4 zona pellucida glycoprotein 4 protein-coding Atac153_MAPQ30_peak_1154 chr11 42643597 42643597 + 4.50346 NA Intergenic Intergenic -368357 NR_038309 100507205 Hs.99310 NR_038309 LOC100507205 - uncharacterized LOC100507205 ncRNA Atac153_MAPQ30_peak_1806 chr13 44802156 44802156 + 4.50346 NA Intergenic Intergenic -31820 NR_107046 102465876 NR_107046 MIR8079 hsa-mir-8079 microRNA 8079 ncRNA Atac153_MAPQ30_peak_4535 chr3 5244517 5244517 + 4.50346 NA intron (NM_014674, intron 4 of 11) intron (NM_014674, intron 4 of 11) 15158 NM_014674 9695 Hs.224616 NM_014674 HPRD:09644 EDEM1 EDEM ER degradation enhancer, mannosidase alpha-like 1 protein-coding Atac153_MAPQ30_peak_6153 chr7 134387914 134387914 + 4.50346 NA Intergenic Intergenic 56383 NM_001293085 669 Hs.198365 NM_001724 HPRD:01961 BPGM DPGM 2,3-bisphosphoglycerate mutase protein-coding Atac153_MAPQ30_peak_1149 chr11 36721890 36721890 + 4.50346 NA Intergenic Intergenic -102061 NM_001243786 5897 Hs.714519 NM_000536 HPRD:08913 RAG2 RAG-2 recombination activating gene 2 protein-coding Atac153_MAPQ30_peak_4770 chr3 82275076 82275076 + 4.50346 NA Intergenic L1PA16|LINE|L1 -464126 NM_000158 2632 Hs.436062 NM_000158 HPRD:01985 GBE1 APBD|GBE|GSD4 glucan (1,4-alpha-), branching enzyme 1 protein-coding Atac153_MAPQ30_peak_996 chr10 130815713 130815713 + 4.50346 NA Intergenic Intergenic -449741 NM_002412 4255 Hs.501522 NM_002412 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding Atac153_MAPQ30_peak_1818 chr13 51773676 51773676 + 4.50346 NA Intergenic Intergenic -22794 NM_001242312 220108 Hs.71913 NM_145019 HPRD:08704 FAM124A - family with sequence similarity 124A protein-coding Atac153_MAPQ30_peak_1153 chr11 40167555 40167555 + 4.50346 NA intron (NM_020929, intron 3 of 4) intron (NM_020929, intron 3 of 4) 147125 NR_047674 57689 Hs.745123 NM_020929 HPRD:12303 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding Atac153_MAPQ30_peak_3657 chr2 106305204 106305204 + 4.50346 NA Intergenic Charlie2a|DNA|hAT-Charlie -56316 NM_003581 8440 Hs.529244 NM_003581 HPRD:05378 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding Atac153_MAPQ30_peak_5770 chr6 120049484 120049484 + 4.50346 NA Intergenic Intergenic -237017 NR_046100 285762 Hs.571063 NR_046100 LOC285762 - uncharacterized LOC285762 ncRNA Atac153_MAPQ30_peak_5737 chr6 92819306 92819306 + 4.45506 NA Intergenic L1PA16|LINE|L1 -419160 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility candidate 6 (non-protein coding) ncRNA Atac153_MAPQ30_peak_770 chr10 62557039 62557039 + 4.45506 NA Intergenic Intergenic 18827 NM_033379 983 Hs.732435 NM_001786 HPRD:00302 CDK1 CDC2|CDC28A|P34CDC2 cyclin-dependent kinase 1 protein-coding Atac153_MAPQ30_peak_2879 chr17 57116347 57116347 + 4.41853 NA intron (NM_001005207, intron 17 of 24) MER49|LTR|ERV1 67919 NM_015294 4591 Hs.579079 NM_015294 HPRD:05463 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding Atac153_MAPQ30_peak_6118 chr7 127181890 127181890 + 4.41853 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 43764 NM_024523 79571 Hs.521168 NM_024523 HPRD:07599 GCC1 GCC1P|GCC88 GRIP and coiled-coil domain containing 1 protein-coding Atac153_MAPQ30_peak_3803 chr2 176379829 176379829 + 4.41853 NA Intergenic L2b|LINE|L2 -333339 NM_001190329 518 Hs.429 NM_001689 ATP5G3 P3 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) protein-coding Atac153_MAPQ30_peak_831 chr10 81315166 81315166 + 4.41853 NA TTS (NM_001098668) TTS (NM_001098668) 4997 NM_001098668 729238 Hs.523084 NM_001098668 ENSG00000185303 SFTPA2 COLEC5|PSAP|PSP-A|PSPA|SFTP1|SFTPA2B|SP-A|SPA2|SPAII surfactant protein A2 protein-coding Atac153_MAPQ30_peak_3518 chr2 44690647 44690647 + 4.41853 NA intron (NM_024766, intron 3 of 10) L1MA5|LINE|L1 86012 NR_039629 100616475 NR_039629 miRBase:MI0016770 MIR548AD - microRNA 548ad ncRNA Atac153_MAPQ30_peak_7164 chrX 112699915 112699915 + 4.41853 NA intron (NR_110399, intron 3 of 3) MER21-int|LTR|ERVL 413960 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA Atac153_MAPQ30_peak_3995 chr20 7617250 7617250 + 4.41853 NA Intergenic LTR16A1|LTR|ERVL 264995 NR_107029 102465865 NR_107029 MIR8062 hsa-mir-8062 microRNA 8062 ncRNA Atac153_MAPQ30_peak_5537 chr5 178347993 178347993 + 4.41853 NA intron (NM_030613, intron 4 of 4) L1MD2|LINE|L1 -20201 NM_182594 285676 Hs.259441 NM_182594 HPRD:15796 ZNF454 - zinc finger protein 454 protein-coding Atac153_MAPQ30_peak_5200 chr4 186220147 186220147 + 4.41853 NA intron (NM_031953, intron 6 of 18) intron (NM_031953, intron 6 of 18) 80005 NM_018409 55805 Hs.558513 NM_018409 HPRD:10911 LRP2BP - LRP2 binding protein protein-coding Atac153_MAPQ30_peak_2444 chr16 24173087 24173087 + 4.41853 NA intron (NM_212535, intron 10 of 16) intron (NM_212535, intron 10 of 16) -93787 NM_006539 10368 Hs.7235 NM_006539 HPRD:05910 CACNG3 - calcium channel, voltage-dependent, gamma subunit 3 protein-coding Atac153_MAPQ30_peak_6456 chr8 108864444 108864444 + 4.41853 NA Intergenic L2c|LINE|L2 230987 NM_001282863 340419 Hs.444834 NM_178565 HPRD:17536 RSPO2 CRISTIN2 R-spondin 2 protein-coding Atac153_MAPQ30_peak_4762 chr3 73193183 73193183 + 4.41853 NA Intergenic Intergenic 82373 NM_018029 55096 Hs.658858 NM_018029 HPRD:07654 EBLN2 EBLN-2 endogenous Bornavirus-like nucleoprotein 2 protein-coding Atac153_MAPQ30_peak_1636 chr12 110302185 110302185 + 4.41853 NA intron (NM_016433, intron 1 of 4) intron (NM_016433, intron 1 of 4) 16108 NM_016433 51228 Hs.381256 NM_016433 HPRD:16409 GLTP - glycolipid transfer protein protein-coding Atac153_MAPQ30_peak_635 chr10 2136501 2136501 + 4.41853 NA Intergenic LTR16C|LTR|ERVL -18218 NR_106720 102465944 NR_106720 MIR6072 hsa-mir-6072 microRNA 6072 ncRNA Atac153_MAPQ30_peak_639 chr10 2722849 2722849 + 4.41853 NA Intergenic Intergenic -365581 NR_038884 399708 Hs.521270 NR_038884 LINC00701 - long intergenic non-protein coding RNA 701 ncRNA Atac153_MAPQ30_peak_3109 chr18 52454527 52454527 + 4.41853 NA Intergenic MLT1K|LTR|ERVL-MaLR -41181 NM_004163 5874 Hs.25318 NM_004163 HPRD:04846 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_6260 chr8 5084652 5084652 + 4.41853 NA Intergenic HERVL40-int|LTR|ERVL -232324 NM_033225 64478 Hs.571466 NM_033225 HPRD:10523 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding Atac153_MAPQ30_peak_4641 chr3 40087868 40087868 + 4.41853 NA intron (NM_001284425, intron 3 of 15) L2c|LINE|L2 -53634 NM_001284426 25924 Hs.594535 NM_015460 HPRD:14796 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding Atac153_MAPQ30_peak_3160 chr18 75471576 75471576 + 4.41853 NA Intergenic Intergenic 234107 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA Atac153_MAPQ30_peak_5774 chr6 125020459 125020459 + 4.38463 NA intron (NM_001300740, intron 3 of 5) MLT1G3|LTR|ERVL-MaLR -263232 NM_001286398 154214 Hs.368639 NM_152553 HPRD:17125 RNF217 C6orf172|IBRDC1|dJ84N20.1 ring finger protein 217 protein-coding Atac153_MAPQ30_peak_3609 chr2 91772532 91772532 + 4.38463 NA Intergenic MLT1C|LTR|ERVL-MaLR 75443 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_6295 chr8 19850881 19850881 + 4.33727 NA Intergenic L2a|LINE|L2 54299 NM_000237 4023 Hs.180878 NM_000237 HPRD:01999 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding Atac153_MAPQ30_peak_4237 chr21 19581931 19581931 + 4.33727 NA intron (NM_001204176, intron 2 of 6) L1M1|LINE|L1 -35219 NM_024944 140578 Hs.283725 NM_024944 HPRD:06261 CHODL C21orf68|MT75 chondrolectin protein-coding Atac153_MAPQ30_peak_4541 chr3 8461605 8461605 + 4.33727 NA intron (NR_033378, intron 3 of 3) MIRc|SINE|MIR 81739 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_1731 chr12 130777012 130777012 + 4.33727 NA Intergenic LTR50|LTR|ERVL -45421 NM_004764 9271 Hs.405659 NM_004764 HPRD:10409 PIWIL1 CT80.1|HIWI|MIWI|PIWI piwi-like RNA-mediated gene silencing 1 protein-coding Atac153_MAPQ30_peak_3106 chr18 49381409 49381409 + 4.33727 NA Intergenic Intergenic 462997 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LOC100287225 - uncharacterized LOC100287225 ncRNA Atac153_MAPQ30_peak_5357 chr5 92717350 92717350 + 4.33727 NA Intergenic Intergenic 189699 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2864 chr17 50764613 50764613 + 4.33727 NA Intergenic Intergenic -298267 NM_001243552 100506650 Hs.146556 NM_001243552 ENSG00000227011 C17orf112 - chromosome 17 open reading frame 112 protein-coding Atac153_MAPQ30_peak_2370 chr16 6009059 6009059 + 4.33727 NA Intergenic MIR|SINE|MIR -60073 NM_001142333 54715 Hs.459842 NM_018723 HPRD:16091 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding Atac153_MAPQ30_peak_4744 chr3 67304457 67304457 + 4.33727 NA Intergenic THE1D-int|LTR|ERVL-MaLR 28569 NR_036234 100422941 NR_036234 MIR4272 - microRNA 4272 ncRNA Atac153_MAPQ30_peak_2167 chr15 55881845 55881845 + 4.33727 NA promoter-TSS (NM_015617) promoter-TSS (NM_015617) -795 NM_015617 26108 Hs.87194 NM_015617 PYGO1 - pygopus family PHD finger 1 protein-coding Atac153_MAPQ30_peak_5324 chr5 67385840 67385840 + 4.33727 NA Intergenic MLT1C|LTR|ERVL-MaLR -99864 NR_105003 102467655 Hs.544102 NR_105003 LOC102467655 - uncharacterized LOC102467655 ncRNA Atac153_MAPQ30_peak_4658 chr3 45517987 45517987 + 4.33727 NA exon (NM_015340, exon 10 of 22) exon (NM_015340, exon 10 of 22) 33050 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1266 chr11 73744389 73744389 + 4.33727 NA intron (NM_001286577, intron 31 of 32) intron (NM_001286577, intron 31 of 32) -24107 NM_022803 7352 Hs.101337 NM_003356 HPRD:03623 UCP3 SLC25A9 uncoupling protein 3 (mitochondrial, proton carrier) protein-coding Atac153_MAPQ30_peak_6275 chr8 10106066 10106066 + 4.33727 NA intron (NM_001199729, intron 4 of 6) intron (NM_001199729, intron 4 of 6) 153004 NM_001135671 4482 Hs.490981 NM_012331 HPRD:03152 MSRA PMSR methionine sulfoxide reductase A protein-coding Atac153_MAPQ30_peak_5093 chr4 58201996 58201996 + 4.33727 NA Intergenic Intergenic -225445 NM_001253835 3490 Hs.479808 NM_001553 HPRD:04183 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin-like growth factor binding protein 7 protein-coding Atac153_MAPQ30_peak_5428 chr5 140363679 140363679 + 4.33661 NA intron (NM_018902, intron 3 of 3) intron (NM_018902, intron 3 of 3) 17327 NM_031883 56134 Hs.199343 NM_018899 HPRD:07331 PCDHAC2 PCDH-ALPHA-C2 protocadherin alpha subfamily C, 2 protein-coding Atac153_MAPQ30_peak_7307 chrY 13484765 13484765 + 4.33661 NA Intergenic BSR/Beta|Satellite|Satellite 1048624 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_5088 chr4 55968243 55968243 + 4.33661 NA intron (NM_002253, intron 14 of 29) intron (NM_002253, intron 14 of 29) 23519 NM_002253 3791 Hs.479756 NM_002253 HPRD:01867 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor (a type III receptor tyrosine kinase) protein-coding Atac153_MAPQ30_peak_4767 chr3 75698421 75698421 + 4.33367 NA Intergenic BSR/Beta|Satellite|Satellite -15060 NR_037925 647476 Hs.274541 NR_037925 FLJ20518 - FSHD region gene 2 family, member C pseudogene pseudo Atac153_MAPQ30_peak_2492 chr16 46386679 46386679 + 4.31751 NA Intergenic HSATII|Satellite|Satellite 216330 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo Atac153_MAPQ30_peak_5588 chr6 9937261 9937261 + 4.31366 NA Intergenic Intergenic -475290 NR_033910 100130275 Hs.661431 NR_033910 TFAP2A-AS1 - TFAP2A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5067 chr4 43241796 43241796 + 4.25565 NA Intergenic MER102c|DNA|hAT-Charlie 346513 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin, cysteine rich 1 protein-coding Atac153_MAPQ30_peak_6733 chr9 102538626 102538626 + 4.25565 NA intron (NR_109802, intron 2 of 6) intron (NR_109802, intron 2 of 6) 43545 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA Atac153_MAPQ30_peak_5439 chr5 146918671 146918671 + 4.25565 NA Intergenic LTR33A_|LTR|ERVL -20886 NR_038902 153469 Hs.184323 NR_038902 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6143 chr7 132042274 132042274 + 4.25565 NA intron (NM_020911, intron 3 of 31) intron (NM_020911, intron 3 of 31) 219049 NM_020911 91584 Hs.511454 NM_020911 HPRD:10901 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding Atac153_MAPQ30_peak_1752 chr13 19883557 19883557 + 4.25565 NA intron (NR_027248, intron 10 of 20) intron (NR_027248, intron 10 of 20) 35556 NR_027248 100101938 Hs.129283 NR_027248 ANKRD26P3 LINC00414 ankyrin repeat domain 26 pseudogene 3 pseudo Atac153_MAPQ30_peak_2010 chr14 86635462 86635462 + 4.25565 NA Intergenic Intergenic 234440 NR_110155 101928767 Hs.536380 NR_110155 LOC101928767 - uncharacterized LOC101928767 ncRNA Atac153_MAPQ30_peak_6581 chr9 5269471 5269471 + 4.25565 NA Intergenic LTR39|LTR|ERV1 35140 NM_005059 6019 Hs.127032 NM_005059 HPRD:01561 RLN2 H2|H2-RLX|RLXH2|bA12D24.1.1|bA12D24.1.2 relaxin 2 protein-coding Atac153_MAPQ30_peak_5233 chr5 5164163 5164163 + 4.25565 NA intron (NM_139056, intron 3 of 22) intron (NM_139056, intron 3 of 22) 23720 NM_139056 170690 Hs.661915 NM_139056 HPRD:06331 ADAMTS16 ADAMTS16s ADAM metallopeptidase with thrombospondin type 1 motif, 16 protein-coding Atac153_MAPQ30_peak_1944 chr14 63178080 63178080 + 4.24248 NA intron (NM_172375, intron 9 of 9) intron (NM_172375, intron 9 of 9) 333876 NM_172375 27133 Hs.27043 NM_139318 HPRD:10421 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel, subfamily H (eag-related), member 5 protein-coding Atac153_MAPQ30_peak_5162 chr4 150633236 150633236 + 4.24248 NA Intergenic Intergenic -366190 NM_001040260 166614 Hs.591683 NM_152619 HPRD:13122 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin-like kinase 2 protein-coding Atac153_MAPQ30_peak_3619 chr2 91818542 91818542 + 4.23788 NA Intergenic Intergenic 29433 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_5188 chr4 175283718 175283718 + 4.17662 NA Intergenic MER47B|DNA|TcMar-Tigger -61228 NR_036236 100423042 NR_036236 miRBase:MI0015882 MIR4276 - microRNA 4276 ncRNA Atac153_MAPQ30_peak_3610 chr2 91776002 91776002 + 4.17662 NA Intergenic Intergenic 71973 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_6778 chr9 120050545 120050545 + 4.17489 NA intron (NM_014010, intron 2 of 21) intron (NM_014010, intron 2 of 21) -107065 NR_003708 100124538 Hs.693445 NR_003708 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA Atac153_MAPQ30_peak_2213 chr15 67704044 67704044 + 4.17489 NA intron (NR_040051, intron 5 of 5) intron (NR_040051, intron 5 of 5) 109267 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1598 chr12 103419249 103419249 + 4.17170 NA Intergenic Intergenic 67797 NM_004316 429 Hs.703025 NM_004316 HPRD:00011 ASCL1 ASH1|HASH1|MASH1|bHLHa46 achaete-scute family bHLH transcription factor 1 protein-coding Atac153_MAPQ30_peak_4463 chr22 43203034 43203034 + 4.17170 NA intron (NM_001142293, intron 13 of 14) intron (NM_001142293, intron 13 of 14) 50374 NM_001142293 26286 Hs.685225 NM_014570 HPRD:06444 ARFGAP3 ARFGAP1 ADP-ribosylation factor GTPase activating protein 3 protein-coding Atac153_MAPQ30_peak_6069 chr7 80820045 80820045 + 4.17170 NA Intergenic ERVL-E-int|LTR|ERVL -271378 NM_006379 10512 Hs.269109 NM_006379 HPRD:04034 SEMA3C SEMAE|SemE sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C protein-coding Atac153_MAPQ30_peak_679 chr10 17392638 17392638 + 4.17170 NA intron (NM_001004470, intron 4 of 7) intron (NM_001004470, intron 4 of 7) -36297 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2325 chr15 94354909 94354909 + 4.17170 NA Intergenic Intergenic -44880 NR_120321 101927153 Hs.371900 NR_120321 ENSG00000258476 LOC101927153 - uncharacterized LOC101927153 ncRNA Atac153_MAPQ30_peak_1769 chr13 24803501 24803501 + 4.17170 NA intron (NM_001286792, intron 4 of 14) MIRb|SINE|MIR 25076 NR_046531 100874231 Hs.577998 NR_046531 ENSG00000227213 SPATA13-AS1 - SPATA13 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6638 chr9 75189186 75189186 + 4.17170 NA intron (NM_138691, intron 1 of 23) intron (NM_138691, intron 1 of 23) 52469 NM_138691 117531 Hs.670211 NM_138691 HPRD:05988 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel-like 1 protein-coding Atac153_MAPQ30_peak_3753 chr2 133987647 133987647 + 4.17170 NA intron (NM_207481, intron 4 of 17) MLT1I|LTR|ERVL-MaLR -36120 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 LOC101928161 - uncharacterized LOC101928161 ncRNA Atac153_MAPQ30_peak_1571 chr12 81727650 81727650 + 4.10401 NA intron (NM_001220474, intron 19 of 30) L3|LINE|CR1 35543 NM_001220480 8499 Hs.506216 NM_003625 HPRD:04392 PPFIA2 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 protein-coding Atac153_MAPQ30_peak_5736 chr6 91771825 91771825 + 4.09850 NA Intergenic L1PA17|LINE|L1 -459553 NR_039786 100616174 NR_039786 miRBase:MI0017270 MIR4643 - microRNA 4643 ncRNA Atac153_MAPQ30_peak_5130 chr4 103062454 103062454 + 4.09850 NA Intergenic Intergenic 183015 NM_001135148 64116 Hs.288034 NM_022154 HPRD:12286 SLC39A8 BIGM103|LZT-Hs6|ZIP8 solute carrier family 39 (zinc transporter), member 8 protein-coding Atac153_MAPQ30_peak_6655 chr9 82377302 82377302 + 4.09850 NA Intergenic Intergenic -62143 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 - long intergenic non-protein coding RNA 1507 ncRNA Atac153_MAPQ30_peak_1766 chr13 23686377 23686377 + 4.09850 NA Intergenic MER21B|LTR|ERVL -68683 NM_000231 6445 Hs.37167 NM_000231 HPRD:07039 SGCG A4|DAGA4|DMDA|DMDA1|LGMD2C|MAM|SCARMD2|SCG3|TYPE sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) protein-coding Atac153_MAPQ30_peak_3499 chr2 35292200 35292200 + 4.09850 NA Intergenic L1PA16|LINE|L1 1290513 NR_037631 100288911 Hs.432924 NR_037631 LOC100288911 - uncharacterized LOC100288911 ncRNA Atac153_MAPQ30_peak_3374 chr2 2174007 2174007 + 4.09850 NA intron (NM_015025, intron 3 of 24) intron (NM_015025, intron 3 of 24) -148997 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6745 chr9 111625718 111625718 + 4.09850 NA exon (NM_006687, exon 1 of 1) exon (NM_006687, exon 1 of 1) 1210 NM_006687 10881 Hs.123530 NM_006687 HPRD:11976 ACTL7A - actin-like 7A protein-coding Atac153_MAPQ30_peak_5207 chr4 190643027 190643027 + 4.08373 NA Intergenic Intergenic 62267 NR_121679 101928971 Hs.519164 NR_121679 ENSG00000250739 LINC01262 TCONS_l2_00021807 long intergenic non-protein coding RNA 1262 ncRNA Atac153_MAPQ30_peak_2127 chr15 33090630 33090630 + 4.01964 NA intron (NM_001277313, intron 19 of 20) intron (NM_001277313, intron 19 of 20) -79564 NR_109767 100131315 Hs.610545 NR_109767 LOC100131315 - uncharacterized LOC100131315 ncRNA Atac153_MAPQ30_peak_356 chr1 119999187 119999187 + 4.01964 NA Intergenic Intergenic 41444 NM_000198 3284 Hs.654399 NM_000198 HPRD:01941 HSD3B2 HSD3B|HSDB|SDR11E2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 protein-coding Atac153_MAPQ30_peak_1865 chr13 110685206 110685206 + 4.01964 NA Intergenic Intergenic -246292 NM_003749 8660 Hs.442344 NM_003749 HPRD:02878 IRS2 IRS-2 insulin receptor substrate 2 protein-coding Atac153_MAPQ30_peak_1457 chr12 11000555 11000555 + 4.01964 NA intron (NR_037918, intron 8 of 9) intron (NR_037918, intron 8 of 9) 1520 NM_007244 11272 Hs.732031 NM_007244 HPRD:09248 PRR4 LPRP|PROL4 proline rich 4 (lacrimal) protein-coding Atac153_MAPQ30_peak_539 chr1 223036505 223036505 + 4.01964 NA intron (NM_032890, intron 1 of 9) L1MC4a|LINE|L1 48074 NM_032890 84976 Hs.528817 NM_032890 HPRD:06326 DISP1 DISPA dispatched homolog 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_5132 chr4 103423084 103423084 + 4.01964 NA intron (NM_003998, intron 1 of 23) CpG 598 NM_001165412 4790 Hs.618430 NM_003998 HPRD:01238 NFKB1 EBP-1|KBF1|NF-kB1|NF-kappa-B|NF-kappaB|NFKB-p105|NFKB-p50|NFkappaB|p105|p50 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 protein-coding Atac153_MAPQ30_peak_3483 chr2 30158980 30158980 + 4.01964 NA Intergenic Intergenic -14503 NM_004304 238 Hs.654469 NM_004304 HPRD:00104 ALK CD246|NBLST3 anaplastic lymphoma receptor tyrosine kinase protein-coding Atac153_MAPQ30_peak_6597 chr9 18258639 18258639 + 4.01964 NA Intergenic L2|LINE|L2 -215440 NM_052866 92949 Hs.741483 NM_052866 HPRD:16462 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS-like 1 protein-coding Atac153_MAPQ30_peak_5720 chr6 77773360 77773360 + 4.01964 NA Intergenic L1M2|LINE|L1 399760 NM_000863 3351 Hs.123016 NM_000863 HTR1B 5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled protein-coding Atac153_MAPQ30_peak_3770 chr2 148719695 148719695 + 3.96824 NA intron (NM_001190881, intron 1 of 10) L1MA5A|LINE|L1 58611 NM_001190882 5000 Hs.558364 NM_002552 HPRD:09118 ORC4 ORC4L|ORC4P origin recognition complex, subunit 4 protein-coding Atac153_MAPQ30_peak_1476 chr12 28329685 28329685 + 3.96824 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -80448 NM_018318 55297 Hs.653125 NM_018318 HPRD:16905 CCDC91 p56 coiled-coil domain containing 91 protein-coding Atac153_MAPQ30_peak_6414 chr8 87934109 87934109 + 3.94261 NA intron (NM_173538, intron 3 of 10) intron (NM_173538, intron 3 of 10) 55433 NM_173538 168975 Hs.246284 NM_173538 HPRD:08192 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding Atac153_MAPQ30_peak_6426 chr8 96869721 96869721 + 3.94261 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 90855 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine/arginine-rich splicing factor 3 pseudogene pseudo Atac153_MAPQ30_peak_5592 chr6 11494927 11494927 + 3.94261 NA Intergenic Intergenic -43533 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding Atac153_MAPQ30_peak_531 chr1 214774774 214774774 + 3.94261 NA Intergenic Intergenic -1758 NM_016343 1063 Hs.497741 NM_016343 HPRD:02582 CENPF CENF|PRO1779|hcp-1 centromere protein F, 350/400kDa protein-coding Atac153_MAPQ30_peak_5966 chr7 36113206 36113206 + 3.94261 NA Intergenic Intergenic -21714 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA Atac153_MAPQ30_peak_4093 chr20 37854550 37854550 + 3.94261 NA Intergenic Intergenic -1159 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LOC339568 - uncharacterized LOC339568 ncRNA Atac153_MAPQ30_peak_2622 chr16 86608443 86608443 + 3.94261 NA Intergenic MIRc|SINE|MIR -3672 NM_005250 2300 Hs.533830 NM_005250 HPRD:07219 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding Atac153_MAPQ30_peak_667 chr10 12827895 12827895 + 3.94261 NA intron (NM_020397, intron 5 of 9) intron (NM_020397, intron 5 of 9) -47238 NR_027322 283070 Hs.600547 NR_027322 LOC283070 - uncharacterized LOC283070 ncRNA Atac153_MAPQ30_peak_3341 chr19 51364655 51364655 + 3.94261 NA TTS (NM_001030048) TTS (NM_001030048) 6484 NM_001648 354 Hs.171995 NM_001648 HPRD:01461 KLK3 APS|KLK2A1|PSA|hK3 kallikrein-related peptidase 3 protein-coding Atac153_MAPQ30_peak_4479 chr22 45994316 45994316 + 3.94261 NA intron (NM_006486, intron 16 of 16) intron (NM_006486, intron 16 of 16) -73362 NM_001167621 25814 Hs.475125 NM_013236 HPRD:04624 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding Atac153_MAPQ30_peak_439 chr1 176779695 176779695 + 3.94261 NA intron (NM_020318, intron 21 of 22) MER1B|DNA|hAT-Charlie 218886 NR_030163 574441 NR_030163 MIR488 MIRN488|hsa-mir-488 microRNA 488 ncRNA Atac153_MAPQ30_peak_7188 chrX 120979661 120979661 + 3.94261 NA Intergenic MER45B|DNA|hAT-Tip100 798199 NM_012084 2747 Hs.368538 NM_012084 HPRD:02143 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding Atac153_MAPQ30_peak_5800 chr6 143093399 143093399 + 3.94261 NA exon (NM_006734, exon 5 of 10) exon (NM_006734, exon 5 of 10) -134373 NR_027312 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA Atac153_MAPQ30_peak_7089 chrX 70044358 70044358 + 3.94261 NA intron (NM_001003811, intron 9 of 30) L1MD2|LINE|L1 84209 NM_031276 56159 Hs.121776 NM_031276 HPRD:02256 TEX11 TGC1|TSGA3 testis expressed 11 protein-coding Atac153_MAPQ30_peak_4776 chr3 98501178 98501178 + 3.94261 NA intron (NM_001271147, intron 6 of 9) intron (NM_001271147, intron 6 of 9) 49630 NM_006100 10402 Hs.148716 NM_006100 HPRD:06195 ST3GAL6 SIAT10|ST3GALVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding Atac153_MAPQ30_peak_5120 chr4 88313349 88313349 + 3.94261 NA promoter-TSS (NM_016245) promoter-TSS (NM_016245) -894 NM_016245 51170 Hs.594923 NM_016245 HPRD:10881 HSD17B11 17-BETA-HSD11|17-BETA-HSDXI|17BHSD11|DHRS8|PAN1B|RETSDR2|SDR16C2 hydroxysteroid (17-beta) dehydrogenase 11 protein-coding Atac153_MAPQ30_peak_4530 chr3 3152642 3152642 + 3.94261 NA promoter-TSS (NM_175724) promoter-TSS (NM_175724) -584 NM_000564 3568 Hs.68876 NM_000564 HPRD:00998 IL5RA CD125|CDw125|HSIL5R3|IL5R interleukin 5 receptor, alpha protein-coding Atac153_MAPQ30_peak_3496 chr2 33419671 33419671 + 3.94261 NA intron (NM_000627, intron 3 of 29) Tigger1|DNA|TcMar-Tigger 60007 NM_001166266 4052 Hs.619315 NM_000627 HPRD:01039 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding Atac153_MAPQ30_peak_5450 chr5 150643754 150643754 + 3.94261 NA intron (NM_001167607, intron 2 of 3) intron (NM_001167607, intron 2 of 3) 11141 NM_000405 2760 Hs.483873 NM_000405 HPRD:02034 GM2A GM2-AP|SAP-3 GM2 ganglioside activator protein-coding Atac153_MAPQ30_peak_764 chr10 60727937 60727937 + 3.94261 NA Intergenic Intergenic -31341 NR_108046 100507008 Hs.170953 NR_108046 LINC00844 - long intergenic non-protein coding RNA 844 ncRNA Atac153_MAPQ30_peak_5730 chr6 87435507 87435507 + 3.94261 NA Intergenic Intergenic -211517 NM_000865 3354 Hs.1611 NM_000865 HPRD:01635 HTR1E 5-HT1E 5-hydroxytryptamine (serotonin) receptor 1E, G protein-coupled protein-coding Atac153_MAPQ30_peak_5083 chr4 54770372 54770372 + 3.94261 NA Intergenic Intergenic 83077 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo Atac153_MAPQ30_peak_5937 chr7 26478960 26478960 + 3.94261 NA intron (NR_015364, intron 1 of 4) intron (NR_015364, intron 1 of 4) 35852 NR_015364 441204 Hs.587432 NR_015364 LOC441204 - uncharacterized LOC441204 ncRNA Atac153_MAPQ30_peak_310 chr1 101843078 101843078 + 3.94261 NA Intergenic Intergenic -36627 NR_046482 100873740 NR_046482 ENSG00000207116 RNU6-31P RNU6-31|RNU6-6 RNA, U6 small nuclear 31, pseudogene snRNA Atac153_MAPQ30_peak_2718 chr17 14837122 14837122 + 3.94261 NA Intergenic Intergenic -97170 NR_033371 94150 Hs.147654 NR_033371 ENSG00000259944 CDRT7 LINC00025|NCRNA00025 CMT1A duplicated region transcript 7 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4498 chr22 47552621 47552621 + 3.94261 NA intron (NR_104292, intron 13 of 13) intron (NR_104292, intron 13 of 13) -240683 NR_122047 642757 Hs.632786 NR_122047 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6338 chr8 36358686 36358686 + 3.94261 NA Intergenic Intergenic -283156 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium channel, subfamily U, member 1 protein-coding Atac153_MAPQ30_peak_2313 chr15 91535821 91535821 + 3.94261 NA intron (NM_199413, intron 1 of 13) intron (NM_199413, intron 1 of 13) 2060 NM_003981 9055 Hs.366401 NM_003981 HPRD:17899 PRC1 ASE1 protein regulator of cytokinesis 1 protein-coding Atac153_MAPQ30_peak_1664 chr12 115377033 115377033 + 3.94261 NA Intergenic Intergenic -255064 NM_005996 6926 Hs.744016 NM_005996 HPRD:03373 TBX3 TBX3-ISO|UMS|XHL T-box 3 protein-coding Atac153_MAPQ30_peak_6107 chr7 107184911 107184911 + 3.94261 NA intron (NM_181733, intron 5 of 20) L1M3e|LINE|L1 -19491 NR_073002 11062 Hs.97627 NM_181581 HPRD:17886 DUS4L DUS4|PP35 dihydrouridine synthase 4-like (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5215 chr5 1469153 1469153 + 3.94261 NA intron (NM_024830, intron 12 of 13) intron (NM_024830, intron 12 of 13) -23610 NM_001044 6531 Hs.406 NM_001044 HPRD:00543 SLC6A3 DAT|DAT1|PKDYS solute carrier family 6 (neurotransmitter transporter), member 3 protein-coding Atac153_MAPQ30_peak_1978 chr14 72601640 72601640 + 3.94261 NA intron (NM_001204420, intron 2 of 15) MLT2B2|LTR|ERVL 201854 NM_001204418 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP regulator of G-protein signaling 6 protein-coding Atac153_MAPQ30_peak_987 chr10 130167353 130167353 + 3.94261 NA Intergenic Intergenic 83139 NR_120619 101927381 Hs.523342 NR_120619 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA Atac153_MAPQ30_peak_2743 chr17 19175122 19175122 + 3.94261 NA intron (NR_046824, intron 1 of 2) intron (NR_046824, intron 1 of 2) 416 NR_046824 100874309 Hs.733657 NR_046824 EPN2-IT1 - EPN2 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_6206 chr7 153018442 153018442 + 3.94261 NA Intergenic Intergenic 90877 NR_125776 103724390 Hs.614280 NR_125776 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA Atac153_MAPQ30_peak_1746 chr12 132566067 132566067 + 3.94261 NA Intergenic Intergenic -2761 NR_003290 347918 Hs.122115 NM_182613 HPRD:13413 EP400NL - EP400 N-terminal like pseudo Atac153_MAPQ30_peak_758 chr10 52350788 52350788 + 3.94261 NA intron (NM_147156, intron 1 of 10) intron (NM_147156, intron 1 of 10) 32949 NM_147156 259230 Hs.654698 NM_147156 HPRD:18203 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding Atac153_MAPQ30_peak_1078 chr11 9739617 9739617 + 3.94261 NA intron (NM_015055, intron 3 of 11) intron (NM_015055, intron 3 of 11) -40223 NR_036485 283104 Hs.632156 NR_036485 ENSG00000246273 SBF2-AS1 - SBF2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1789 chr13 33598143 33598143 + 3.94261 NA intron (NM_004795, intron 1 of 4) L3|LINE|CR1 7572 NM_004795 9365 Hs.524953 NM_004795 HPRD:05316 KL - klotho protein-coding Atac153_MAPQ30_peak_3064 chr18 36223986 36223986 + 3.91540 NA Intergenic Intergenic 986888 NR_036202 100422857 NR_036202 miRBase:MI0015847 MIR4318 - microRNA 4318 ncRNA Atac153_MAPQ30_peak_5973 chr7 38790229 38790229 + 3.91540 NA intron (NM_080631, intron 21 of 27) intron (NM_080631, intron 21 of 27) -63540 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183B - acyloxyacyl hydrolase (neutrophil) pseudo Atac153_MAPQ30_peak_1716 chr12 128529681 128529681 + 3.89185 NA Intergenic LTR9|LTR|ERV1 73005 NR_104647 100996679 Hs.539127 NR_104647 ENSG00000256551 LOC100996679 - uncharacterized LOC100996679 ncRNA Atac153_MAPQ30_peak_2552 chr16 69353752 69353752 + 3.89185 NA intron (NM_013245, intron 6 of 10) intron (NM_013245, intron 6 of 10) 8465 NM_013245 27183 Hs.128420 NM_013245 HPRD:11676 VPS4A SKD1|SKD1A|SKD2|VPS4|VPS4-1 vacuolar protein sorting 4 homolog A (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_3712 chr2 128183712 128183712 + 3.89185 NA exon (NM_000312, exon 7 of 9) exon (NM_000312, exon 7 of 9) -2518 NR_039944 100616187 NR_039944 miRBase:MI0017428 MIR4783 - microRNA 4783 ncRNA Atac153_MAPQ30_peak_1363 chr11 121497922 121497922 + 3.89185 NA intron (NM_003105, intron 46 of 47) intron (NM_003105, intron 46 of 47) 175010 NM_003105 6653 Hs.368592 NM_003105 HPRD:03595 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin-related receptor, L(DLR class) A repeats containing protein-coding Atac153_MAPQ30_peak_4883 chr3 140746913 140746913 + 3.89185 NA Intergenic L2c|LINE|L2 -23830 NM_080862 92369 Hs.655112 NM_080862 HPRD:18108 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding Atac153_MAPQ30_peak_5454 chr5 151443972 151443972 + 3.89185 NA intron (NR_109876, intron 1 of 2) MLT1K|LTR|ERVL-MaLR 105513 NR_109876 101927115 Hs.549665 NR_109876 ENSG00000254226 CTB-12O2.1 - uncharacterized LOC101927115 ncRNA Atac153_MAPQ30_peak_6511 chr8 136743140 136743140 + 3.89185 NA Intergenic Intergenic 273424 NM_006558 10656 Hs.444558 NM_006558 HPRD:10007 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH domain containing, RNA binding, signal transduction associated 3 protein-coding Atac153_MAPQ30_peak_1383 chr11 128327592 128327592 + 3.89185 NA Intergenic Intergenic 64613 NM_005238 2113 Hs.369438 NM_005238 HPRD:01260 ETS1 ETS-1|EWSR2|p54 v-ets avian erythroblastosis virus E26 oncogene homolog 1 protein-coding Atac153_MAPQ30_peak_5378 chr5 114766884 114766884 + 3.89185 NA Intergenic Intergenic 113707 NM_020177 56929 Hs.47367 NM_020177 HPRD:16384 FEM1C EUROIMAGE686608|EUROIMAGE783647|FEM1A fem-1 homolog c (C. elegans) protein-coding Atac153_MAPQ30_peak_3974 chr20 2161712 2161712 + 3.89185 NA Intergenic MLT1H|LTR|ERVL-MaLR -25862 NM_001287682 388780 Hs.132163 NM_001287682 LOC388780 - uncharacterized LOC388780 protein-coding Atac153_MAPQ30_peak_5373 chr5 112218350 112218350 + 3.89185 NA intron (NM_005669, intron 4 of 4) MER58B|DNA|hAT-Charlie 21465 NM_001204194 6728 Hs.637001 NM_003135 SRP19 - signal recognition particle 19kDa protein-coding Atac153_MAPQ30_peak_1389 chr11 129575624 129575624 + 3.89185 NA Intergenic Intergenic -88460 NR_120582 101929557 Hs.385785 NR_120582 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA Atac153_MAPQ30_peak_1988 chr14 75085415 75085415 + 3.89185 NA Intergenic MIRb|SINE|MIR -6381 NM_000428 4053 Hs.512776 NM_000428 HPRD:03650 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding Atac153_MAPQ30_peak_2097 chr15 24193553 24193553 + 3.89185 NA Intergenic L1MEc|LINE|L1 221500 NR_026647 791115 Hs.560378 NR_026647 ENSG00000260551 PWRN2 NCRNA00199 Prader-Willi region non-protein coding RNA 2 ncRNA Atac153_MAPQ30_peak_2911 chr17 69851387 69851387 + 3.89185 NA Intergenic Intergenic 170733 NR_110876 102723505 Hs.547482 NR_110876 LOC102723505 - uncharacterized LOC102723505 ncRNA Atac153_MAPQ30_peak_57 chr1 9261957 9261957 + 3.89185 NA Intergenic Intergenic -32906 NM_004285 9563 Hs.463511 NM_004285 HPRD:00681 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) protein-coding Atac153_MAPQ30_peak_4377 chr22 27895837 27895837 + 3.89185 NA Intergenic Intergenic 301649 NM_002430 4330 Hs.268515 NM_002430 HPRD:08862 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 meningioma (disrupted in balanced translocation) 1 protein-coding Atac153_MAPQ30_peak_1472 chr12 25780534 25780534 + 3.89185 NA intron (NM_001145727, intron 1 of 7) intron (NM_001145727, intron 1 of 7) 20962 NM_001145727 160492 Hs.44647 NM_152590 HPRD:08768 LMNTD1 IFLTD1|PAS1C1 lamin tail domain containing 1 protein-coding Atac153_MAPQ30_peak_5598 chr6 14512631 14512631 + 3.89185 NA Intergenic LTR81A|LTR|Gypsy -226946 NR_108096 102216342 Hs.563409 NR_108096 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA Atac153_MAPQ30_peak_183 chr1 34306722 34306722 + 3.89185 NA intron (NM_052896, intron 6 of 69) intron (NM_052896, intron 6 of 69) -19354 NM_145205 127540 Hs.568628 NM_145205 HPRD:14038 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding Atac153_MAPQ30_peak_936 chr10 122220698 122220698 + 3.89185 NA intron (NM_001030059, intron 1 of 6) intron (NM_001030059, intron 1 of 6) 4232 NM_001030059 196051 Hs.40479 NM_001030059 HPRD:18745 PPAPDC1A DPPL2|PPAPDC1 phosphatidic acid phosphatase type 2 domain containing 1A protein-coding Atac153_MAPQ30_peak_2221 chr15 69587346 69587346 + 3.89185 NA Intergenic MLT1C|LTR|ERVL-MaLR -3948 NM_017705 54852 Hs.591096 NM_017705 HPRD:08475 PAQR5 MPRG progestin and adipoQ receptor family member V protein-coding Atac153_MAPQ30_peak_4603 chr3 28801162 28801162 + 3.89185 NA Intergenic MIR|SINE|MIR 184393 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA Atac153_MAPQ30_peak_4462 chr22 43091049 43091049 + 3.89185 NA intron (NM_017436, intron 2 of 2) MIR|SINE|MIR 25827 NM_017436 53947 Hs.105956 NM_017436 HPRD:06390 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase protein-coding Atac153_MAPQ30_peak_4060 chr20 31143700 31143700 + 3.89185 NA intron (NM_001256798, intron 1 of 10) L2b|LINE|L2 29175 NM_001256798 140688 Hs.516978 NM_080616 HPRD:10728 NOL4L C20orf112|C20orf113|dJ1184F4.2|dJ1184F4.4 nucleolar protein 4-like protein-coding Atac153_MAPQ30_peak_12 chr1 2324078 2324078 + 3.89185 NA promoter-TSS (NM_024848) promoter-TSS (NM_024848) 864 NM_007033 11079 Hs.525527 NM_007033 HPRD:17967 RER1 - retention in endoplasmic reticulum sorting receptor 1 protein-coding Atac153_MAPQ30_peak_4553 chr3 10605220 10605220 + 3.89185 NA Intergenic Intergenic -57952 NM_001683 491 Hs.268942 NM_001683 HPRD:00160 ATP2B2 PMCA2|PMCA2a|PMCA2i ATPase, Ca++ transporting, plasma membrane 2 protein-coding Atac153_MAPQ30_peak_118 chr1 20006340 20006340 + 3.89185 NA 3' UTR (NM_000871, exon 3 of 3) 3' UTR (NM_000871, exon 3 of 3) 14560 NM_000871 3362 Hs.22180 NM_000871 HPRD:03066 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine (serotonin) receptor 6, G protein-coupled protein-coding Atac153_MAPQ30_peak_3098 chr18 47450962 47450962 + 3.89185 NA intron (NM_001080467, intron 17 of 39) intron (NM_001080467, intron 17 of 39) 110569 NR_117096 103091864 Hs.646459 NR_117096 SNHG22 SCARNA17HG small nucleolar RNA host gene 22 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4086 chr20 36327254 36327254 + 3.89185 NA intron (NM_030877, intron 1 of 15) AluJb|SINE|Alu 4897 NM_030877 56259 Hs.472667 NM_030877 HPRD:10850 CTNNBL1 C20orf33|NAP|P14L|PP8304|dJ633O20.1 catenin, beta like 1 protein-coding Atac153_MAPQ30_peak_6472 chr8 125463690 125463690 + 3.89185 NA exon (NM_017956, exon 1 of 1) exon (NM_017956, exon 1 of 1) 642 NM_017956 55039 Hs.9925 NM_017956 HPRD:07947 TRMT12 TRM12|TYW2 tRNA methyltransferase 12 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_2643 chr16 89188041 89188041 + 3.89185 NA intron (NR_104293, intron 7 of 10) intron (NR_104293, intron 7 of 10) -14915 NR_045667 197322 Hs.461727 NM_174917 HPRD:14117 ACSF3 - acyl-CoA synthetase family member 3 protein-coding Atac153_MAPQ30_peak_3514 chr2 42970158 42970158 + 3.89185 NA intron (NM_001282755, intron 17 of 17) intron (NM_001282755, intron 17 of 17) 21243 NM_148962 165140 Hs.168439 NM_148962 HPRD:17812 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid (OXE) receptor 1 protein-coding Atac153_MAPQ30_peak_2377 chr16 7631175 7631175 + 3.89185 NA intron (NM_145893, intron 3 of 13) intron (NM_145893, intron 3 of 13) 248424 NM_145893 54715 Hs.459842 NM_018723 HPRD:16091 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding Atac153_MAPQ30_peak_894 chr10 106083977 106083977 + 3.89185 NA intron (NR_120622, intron 2 of 2) intron (NR_120622, intron 2 of 2) 855 NR_120622 101927472 Hs.670333 NR_120622 LOC101927472 - uncharacterized LOC101927472 ncRNA Atac153_MAPQ30_peak_729 chr10 45452135 45452135 + 3.89185 NA intron (NR_033842, intron 1 of 7) MER58A|DNA|hAT-Charlie 3002 NR_033842 220980 Hs.568801 NR_033842 ENSG00000224812 TMEM72-AS1 - TMEM72 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2923 chr17 72538191 72538191 + 3.89185 NA intron (NM_006678, intron 3 of 3) intron (NM_006678, intron 3 of 3) 4119 NM_006678 10871 Hs.2605 NM_006678 HPRD:09491 CD300C CLM-6|CMRF-35|CMRF-35A|CMRF35|CMRF35-A1|CMRF35A|CMRF35A1|IGSF16|LIR CD300c molecule protein-coding Atac153_MAPQ30_peak_3135 chr18 65943011 65943011 + 3.89185 NA Intergenic MER89-int|LTR|ERV1 439342 NM_019022 54495 Hs.440534 NM_019022 HPRD:15591 TMX3 PDIA13|TXNDC10 thioredoxin-related transmembrane protein 3 protein-coding Atac153_MAPQ30_peak_4523 chr22 49854268 49854268 + 3.89185 NA intron (NR_110523, intron 1 of 4) intron (NR_110523, intron 1 of 4) 196922 NR_110522 348645 Hs.133159 NM_198851 HPRD:14180 C22orf34 - chromosome 22 open reading frame 34 protein-coding Atac153_MAPQ30_peak_2859 chr17 48643980 48643980 + 3.89185 NA intron (NM_018896, intron 1 of 37) intron (NM_018896, intron 1 of 37) -4511 NR_038439 253962 Hs.558704 NR_038439 ENSG00000250107 CACNA1G-AS1 - CACNA1G antisense RNA 1 ncRNA Atac153_MAPQ30_peak_300 chr1 91594473 91594473 + 3.89185 NA Intergenic Intergenic -106661 NM_032186 84146 Hs.173001 NM_016620 HPRD:15885 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding Atac153_MAPQ30_peak_3611 chr2 91779065 91779065 + 3.89185 NA Intergenic AluJr|SINE|Alu 68910 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_2416 chr16 16180017 16180017 + 3.89185 NA intron (NM_004996, intron 17 of 30) intron (NM_004996, intron 17 of 30) 136583 NM_004996 4363 Hs.391464 NM_004996 HPRD:01153 ABCC1 ABC29|ABCC|GS-X|MRP|MRP1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein-coding Atac153_MAPQ30_peak_2376 chr16 7627108 7627108 + 3.89185 NA intron (NM_145893, intron 2 of 13) intron (NM_145893, intron 2 of 13) 244357 NM_145893 54715 Hs.459842 NM_018723 HPRD:16091 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding Atac153_MAPQ30_peak_4446 chr22 39581820 39581820 + 3.89185 NA Intergenic Intergenic -33282 NM_175709 23492 Hs.356416 NM_175709 HPRD:12234 CBX7 - chromobox homolog 7 protein-coding Atac153_MAPQ30_peak_1614 chr12 106324891 106324891 + 3.89185 NA Intergenic MLT1J|LTR|ERVL-MaLR 208920 NM_014840 9891 Hs.524692 NM_014840 HPRD:12171 NUAK1 ARK5 NUAK family, SNF1-like kinase, 1 protein-coding Atac153_MAPQ30_peak_6520 chr8 139373936 139373936 + 3.89185 NA intron (NM_015912, intron 2 of 19) intron (NM_015912, intron 2 of 19) 135129 NM_015912 51059 Hs.126024 NM_015912 HPRD:14230 FAM135B C8ORFK32 family with sequence similarity 135, member B protein-coding Atac153_MAPQ30_peak_1813 chr13 51251703 51251703 + 3.89185 NA Intergenic Intergenic -130288 NR_046551 100874074 Hs.734030 NR_046551 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_337 chr1 114653600 114653600 + 3.89185 NA intron (NM_001270805, intron 3 of 7) Charlie15a|DNA|hAT-Charlie 41462 NM_205848 148281 Hs.370963 NM_205848 HPRD:09654 SYT6 sytVI synaptotagmin VI protein-coding Atac153_MAPQ30_peak_1617 chr12 108521605 108521605 + 3.89185 NA Intergenic Intergenic -1906 NM_014653 9671 Hs.143591 NM_014653 HPRD:17196 WSCD2 - WSC domain containing 2 protein-coding Atac153_MAPQ30_peak_7005 chrX 42611108 42611108 + 3.89185 NA Intergenic MLT1F2|LTR|ERVL-MaLR 26378 NR_002191 80316 Hs.127689 NM_025210 PPP1R2P9 I-4 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 9 pseudo Atac153_MAPQ30_peak_4769 chr3 78590162 78590162 + 3.89185 NA Intergenic LTR43-int|LTR|ERV1 478447 NM_001145845 6091 Hs.744218 NM_002941 HPRD:03890 ROBO1 DUTT1|SAX3 roundabout, axon guidance receptor, homolog 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_294 chr1 84568586 84568586 + 3.89185 NA intron (NM_207578, intron 1 of 8) MLT1G3-int|LTR|ERVL-MaLR 24928 NM_207578 5567 Hs.487325 NM_002731 HPRD:01482 PRKACB PKA C-beta|PKACB protein kinase, cAMP-dependent, catalytic, beta protein-coding Atac153_MAPQ30_peak_736 chr10 46994759 46994759 + 3.89185 NA intron (NM_014696, intron 1 of 2) intron (NM_014696, intron 1 of 2) 1213 NM_014696 9721 Hs.523375 NM_014696 GPRIN2 GRIN2|KIAA0514 G protein regulated inducer of neurite outgrowth 2 protein-coding Atac153_MAPQ30_peak_3978 chr20 2657917 2657917 + 3.89185 NA Intergenic HERVL40-int|LTR|ERVL -13052 NM_006899 3420 Hs.436405 NM_006899 HPRD:05163 IDH3B H-IDHB|RP46 isocitrate dehydrogenase 3 (NAD+) beta protein-coding Atac153_MAPQ30_peak_1384 chr11 128341953 128341953 + 3.89185 NA intron (NM_001143820, intron 8 of 9) intron (NM_001143820, intron 8 of 9) 50252 NM_005238 2113 Hs.369438 NM_005238 HPRD:01260 ETS1 ETS-1|EWSR2|p54 v-ets avian erythroblastosis virus E26 oncogene homolog 1 protein-coding Atac153_MAPQ30_peak_6017 chr7 52666317 52666317 + 3.89185 NA Intergenic LOR1b|LTR|ERV1 -437032 NM_182595 285877 Hs.381970 NM_182595 HPRD:13212 POM121L12 - POM121 transmembrane nucleoporin-like 12 protein-coding Atac153_MAPQ30_peak_5345 chr5 78371889 78371889 + 3.89185 NA intron (NM_001178005, intron 1 of 6) LTR1|LTR|ERV1 6342 NM_017614 23743 Hs.114172 NM_017614 BHMT2 - betaine--homocysteine S-methyltransferase 2 protein-coding Atac153_MAPQ30_peak_3474 chr2 28569535 28569535 + 3.89185 NA Intergenic Intergenic -36209 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA Atac153_MAPQ30_peak_4285 chr21 40439972 40439972 + 3.89185 NA Intergenic Intergenic -90272 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LOC101928435 - uncharacterized LOC101928435 ncRNA Atac153_MAPQ30_peak_6198 chr7 151356054 151356054 + 3.89185 NA intron (NM_001040633, intron 4 of 15) intron (NM_001040633, intron 4 of 15) -26710 NM_024429 51422 Hs.647072 NM_016203 HPRD:04119 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding Atac153_MAPQ30_peak_3903 chr2 233159162 233159162 + 3.89185 NA intron (NR_046477, intron 12 of 18) intron (NR_046477, intron 12 of 18) -84186 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding Atac153_MAPQ30_peak_547 chr1 224885166 224885166 + 3.89185 NA intron (NM_152495, intron 3 of 5) intron (NM_152495, intron 3 of 5) 80987 NM_152495 149111 Hs.731723 NM_152495 HPRD:08799 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding Atac153_MAPQ30_peak_3140 chr18 70822239 70822239 + 3.89185 NA non-coding (NR_034133, exon 6 of 6) non-coding (NR_034133, exon 6 of 6) 109494 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA Atac153_MAPQ30_peak_5744 chr6 107221887 107221887 + 3.89185 NA intron (NR_033557, intron 1 of 6) intron (NR_033557, intron 1 of 6) 13413 NR_033557 100422737 Hs.634681 NR_033557 ENSG00000235142 LOC100422737 - uncharacterized LOC100422737 ncRNA Atac153_MAPQ30_peak_857 chr10 92469805 92469805 + 3.89185 NA Intergenic Intergenic 147866 NM_000872 3363 Hs.73739 NM_000872 HPRD:01639 HTR7 5-HT7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled protein-coding Atac153_MAPQ30_peak_3601 chr2 86898712 86898712 + 3.89185 NA intron (NM_001198954, intron 2 of 7) intron (NM_001198954, intron 2 of 7) -47712 NM_005667 7844 Hs.469199 NM_005667 HPRD:03939 RNF103 HKF-1|KF-1|KF1|ZFP-103|ZFP103 ring finger protein 103 protein-coding Atac153_MAPQ30_peak_28 chr1 4831287 4831287 + 3.89185 NA intron (NM_001042478, intron 3 of 5) intron (NM_001042478, intron 3 of 5) 116182 NM_018836 55966 Hs.25924 NM_018836 HPRD:15339 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding Atac153_MAPQ30_peak_1668 chr12 118216592 118216592 + 3.89185 NA intron (NM_173598, intron 3 of 19) intron (NM_173598, intron 3 of 19) 189436 NM_173598 283455 Hs.375836 NM_173598 HPRD:13952 KSR2 - kinase suppressor of ras 2 protein-coding Atac153_MAPQ30_peak_2710 chr17 11115403 11115403 + 3.89185 NA Intergenic MLT1G|LTR|ERVL-MaLR -29337 NM_207386 388336 Hs.592124 NM_175903 HPRD:13507 SHISA6 - shisa family member 6 protein-coding Atac153_MAPQ30_peak_2182 chr15 60144965 60144965 + 3.89185 NA Intergenic LTR16C|LTR|ERVL -151456 NM_012182 27023 Hs.734475 NM_012182 HPRD:07017 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding Atac153_MAPQ30_peak_2189 chr15 63457254 63457254 + 3.89185 NA Intergenic Intergenic -7513 NM_015920 51065 Hs.108957 NM_015920 HPRD:18003 RPS27L - ribosomal protein S27-like protein-coding Atac153_MAPQ30_peak_5127 chr4 99441427 99441427 + 3.89185 NA intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 138385 NM_005723 10098 Hs.118118 NM_005723 HPRD:15513 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding Atac153_MAPQ30_peak_5718 chr6 75250432 75250432 + 3.89185 NA intron (NR_110856, intron 2 of 3) HERVL-int|LTR|ERVL 471265 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA Atac153_MAPQ30_peak_7173 chrX 116922516 116922516 + 3.89185 NA Intergenic Intergenic 185185 NM_033495 90293 Hs.348262 NM_033495 HPRD:06461 KLHL13 BKLHD2 kelch-like family member 13 protein-coding Atac153_MAPQ30_peak_2528 chr16 58394897 58394897 + 3.89185 NA Intergenic L1MA4A|LINE|L1 -31401 NM_001126130 64785 Hs.47125 NM_022770 HPRD:07842 GINS3 PSF3 GINS complex subunit 3 (Psf3 homolog) protein-coding Atac153_MAPQ30_peak_7182 chrX 119503769 119503769 + 3.89185 NA intron (NM_001142447, intron 2 of 7) MIRb|SINE|MIR 7829 NM_012069 23439 Hs.292599 NM_012069 HPRD:06453 ATP1B4 - ATPase, Na+/K+ transporting, beta 4 polypeptide protein-coding Atac153_MAPQ30_peak_1362 chr11 121384429 121384429 + 3.89185 NA intron (NM_003105, intron 7 of 47) intron (NM_003105, intron 7 of 47) 61517 NM_003105 6653 Hs.368592 NM_003105 HPRD:03595 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin-related receptor, L(DLR class) A repeats containing protein-coding Atac153_MAPQ30_peak_1759 chr13 22185340 22185340 + 3.89185 NA Intergenic LTR12_|LTR|ERV1 -6985 NM_152726 221154 Hs.412103 NM_152726 HPRD:16852 MICU2 1110008L20Rik|EFHA1 mitochondrial calcium uptake 2 protein-coding Atac153_MAPQ30_peak_1088 chr11 11645845 11645845 + 3.89185 NA Intergenic Intergenic -2284 NM_198516 374378 Hs.655152 NM_198516 HPRD:13564 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding Atac153_MAPQ30_peak_4673 chr3 49196285 49196285 + 3.89185 NA Intergenic Intergenic -4451 NR_004405 22973 Hs.607092 NR_004405 LAMB2P1 LAMB2L laminin, beta 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_1293 chr11 87224860 87224860 + 3.89185 NA Intergenic MIR3|SINE|MIR 475974 NR_033149 65084 Hs.188591 NM_022918 TMEM135 PMP52 transmembrane protein 135 protein-coding Atac153_MAPQ30_peak_2006 chr14 82226592 82226592 + 3.89185 NA Intergenic HSMAR2|DNA|TcMar-Mariner -137187 NR_110074 101928559 Hs.525499 NR_110074 ENSG00000258977 LINC01467 - long intergenic non-protein coding RNA 1467 ncRNA Atac153_MAPQ30_peak_5261 chr5 10955453 10955453 + 3.89185 NA Intergenic Intergenic -194066 NM_001291963 1611 Hs.75189 NM_004394 HPRD:02977 DAP - death-associated protein protein-coding Atac153_MAPQ30_peak_312 chr1 108068646 108068646 + 3.89185 NA Intergenic Intergenic 162480 NM_001079874 10451 Hs.267659 NM_006113 HPRD:05706 VAV3 - vav 3 guanine nucleotide exchange factor protein-coding Atac153_MAPQ30_peak_193 chr1 35382688 35382688 + 3.89185 NA Intergenic Intergenic -11704 NM_001080418 58512 Hs.733945 NM_001080418 ENSG00000116544 DLGAP3 DAP3|SAPAP3 discs, large (Drosophila) homolog-associated protein 3 protein-coding Atac153_MAPQ30_peak_6323 chr8 26250348 26250348 + 3.89185 NA intron (NM_004331, intron 2 of 5) intron (NM_004331, intron 2 of 5) 9825 NM_004331 665 Hs.131226 NM_004331 HPRD:07288 BNIP3L BNIP3a|NIX BCL2/adenovirus E1B 19kDa interacting protein 3-like protein-coding Atac153_MAPQ30_peak_6290 chr8 14872223 14872223 + 3.89185 NA intron (NM_139167, intron 1 of 7) intron (NM_139167, intron 1 of 7) -161204 NR_029875 494332 NR_029875 MIR383 MIRN383|hsa-mir-383 microRNA 383 ncRNA Atac153_MAPQ30_peak_4756 chr3 71747558 71747558 + 3.89185 NA intron (NM_173359, intron 4 of 7) intron (NM_173359, intron 4 of 7) 26968 NM_001134651 317649 Hs.581355 NM_173359 HPRD:10687 EIF4E3 eIF-4E3|eIF4E-3 eukaryotic translation initiation factor 4E family member 3 protein-coding Atac153_MAPQ30_peak_946 chr10 124334653 124334653 + 3.89185 NA intron (NM_017579, intron 6 of 51) L1M5|LINE|L1 14472 NM_004406 1755 Hs.279611 NM_004406 HPRD:03575 DMBT1 GP340|muclin deleted in malignant brain tumors 1 protein-coding Atac153_MAPQ30_peak_5773 chr6 124021702 124021702 + 3.89185 NA Intergenic Intergenic -63464 NM_001256022 10345 Hs.144744 NM_006073 HPRD:04474 TRDN CPVT5|TDN|TRISK triadin protein-coding Atac153_MAPQ30_peak_2556 chr16 70193266 70193266 + 3.84562 NA 3' UTR (NM_017990, exon 19 of 19) 3' UTR (NM_017990, exon 19 of 19) -14662 NM_173619 283971 Hs.556045 NM_173619 HPRD:14587 CLEC18C MRCL|MRCL3 C-type lectin domain family 18, member C protein-coding Atac153_MAPQ30_peak_627 chr1 247841986 247841986 + 3.84562 NA Intergenic Intergenic -5643 NM_001005487 441933 Hs.553834 NM_001005487 HPRD:17680 OR13G1 OR1-37 olfactory receptor, family 13, subfamily G, member 1 protein-coding Atac153_MAPQ30_peak_1287 chr11 83374372 83374372 + 3.84562 NA intron (NM_001364, intron 13 of 22) intron (NM_001364, intron 13 of 22) 19096 NM_001142702 1740 Hs.367656 NM_001364 HPRD:04663 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs, large homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_4808 chr3 124017125 124017125 + 3.83555 NA intron (NM_001024660, intron 5 of 59) intron (NM_001024660, intron 5 of 59) -76054 NR_106731 102464832 NR_106731 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA Atac153_MAPQ30_peak_4717 chr3 55557240 55557240 + 3.83555 NA intron (NM_015576, intron 16 of 16) intron (NM_015576, intron 16 of 16) -35570 NM_003392 7474 Hs.643085 NM_003392 HPRD:01293 WNT5A hWNT5A wingless-type MMTV integration site family, member 5A protein-coding Atac153_MAPQ30_peak_7093 chrX 71193335 71193335 + 3.83555 NA intron (NM_001013627, intron 1 of 7) L1MB8|LINE|L1 62397 NM_001013627 340527 Hs.397836 NM_001013627 HPRD:15001 NHSL2 - NHS-like 2 protein-coding Atac153_MAPQ30_peak_498 chr1 204987113 204987113 + 3.83555 NA 3' UTR (NM_001160331, exon 27 of 27) 3' UTR (NM_001160331, exon 27 of 27) -25227 NM_005076 6900 Hs.519220 NM_005076 HPRD:01826 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 (axonal) protein-coding Atac153_MAPQ30_peak_823 chr10 80495459 80495459 + 3.83555 NA Intergenic MLT1J|LTR|ERVL-MaLR 331746 NR_024429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6186 chr7 148341484 148341484 + 3.83555 NA Intergenic AluJo|SINE|Alu 53827 NM_145304 202865 Hs.352212 NM_145304 HPRD:12921 C7orf33 - chromosome 7 open reading frame 33 protein-coding Atac153_MAPQ30_peak_3466 chr2 27322075 27322075 + 3.83555 NA TTS (NM_001166240) TTS (NM_001166240) 11895 NM_001166241 10669 Hs.159525 NM_006569 HPRD:09365 CGREF1 CGR11 cell growth regulator with EF-hand domain 1 protein-coding Atac153_MAPQ30_peak_2937 chr17 74702648 74702648 + 3.83555 NA intron (NM_001008529, intron 1 of 4) intron (NM_001008529, intron 1 of 4) 4408 NM_198530 439921 Hs.250723 NM_198530 HPRD:18199 MXRA7 PS1TP1|TMAP1 matrix-remodelling associated 7 protein-coding Atac153_MAPQ30_peak_3899 chr2 231430276 231430276 + 3.83555 NA Intergenic Intergenic 134968 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LOC151475 - uncharacterized LOC151475 ncRNA Atac153_MAPQ30_peak_2103 chr15 26018229 26018229 + 3.83555 NA intron (NM_024490, intron 2 of 20) intron (NM_024490, intron 2 of 20) 75743 NR_039865 100616474 NR_039865 MIR4715 - microRNA 4715 ncRNA Atac153_MAPQ30_peak_335 chr1 114639707 114639707 + 3.83555 NA intron (NM_001270805, intron 6 of 7) MIRc|SINE|MIR 55355 NM_205848 148281 Hs.370963 NM_205848 HPRD:09654 SYT6 sytVI synaptotagmin VI protein-coding Atac153_MAPQ30_peak_4706 chr3 53274823 53274823 + 3.83555 NA intron (NR_047580, intron 3 of 13) intron (NR_047580, intron 3 of 13) 15307 NM_001135055 7086 Hs.89643 NM_001064 HPRD:06001 TKT HEL107|TK|TKT1 transketolase protein-coding Atac153_MAPQ30_peak_1068 chr11 8009493 8009493 + 3.83555 NA intron (NM_003754, intron 1 of 7) intron (NM_003754, intron 1 of 7) 626 NM_003754 8665 Hs.516023 NM_003754 HPRD:04887 EIF3F EIF3S5|eIF3-p47 eukaryotic translation initiation factor 3, subunit F protein-coding Atac153_MAPQ30_peak_1591 chr12 96370523 96370523 + 3.83555 NA intron (NM_001258334, intron 18 of 19) intron (NM_001258334, intron 18 of 19) 19620 NM_002108 3034 Hs.190783 NM_002108 HPRD:07187 HAL HIS|HSTD histidine ammonia-lyase protein-coding Atac153_MAPQ30_peak_207 chr1 38577145 38577145 + 3.83555 NA Intergenic Intergenic 22242 NR_037432 100500801 NR_037432 miRBase:MI0016060 MIR3659 - microRNA 3659 ncRNA Atac153_MAPQ30_peak_5007 chr4 7701855 7701855 + 3.83555 NA intron (NM_020777, intron 12 of 26) intron (NM_020777, intron 12 of 26) -53962 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5239 chr5 6363377 6363377 + 3.83555 NA Intergenic MLT1C|LTR|ERVL-MaLR 15262 NM_032286 84246 Hs.13885 NM_032286 HPRD:14680 MED10 NUT2|TRG20 mediator complex subunit 10 protein-coding Atac153_MAPQ30_peak_1723 chr12 129585697 129585697 + 3.83555 NA intron (NM_133448, intron 5 of 8) intron (NM_133448, intron 5 of 8) -8538 NR_104173 283352 Hs.665667 NR_104172 ENSG00000249196 LOC283352 - uncharacterized LOC283352 ncRNA Atac153_MAPQ30_peak_1227 chr11 65544310 65544310 + 3.83555 NA 3' UTR (NM_138368, exon 2 of 2) 3' UTR (NM_138368, exon 2 of 2) 3752 NM_138368 91056 Hs.591957 NM_138368 AP5B1 AP-5|PP1030 adaptor-related protein complex 5, beta 1 subunit protein-coding Atac153_MAPQ30_peak_6030 chr7 62541102 62541102 + 3.83555 NA Intergenic Intergenic 223332 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo Atac153_MAPQ30_peak_146 chr1 24794265 24794265 + 3.83555 NA intron (NM_020448, intron 11 of 11) FLAM_A|SINE|Alu -34576 NM_001251984 11123 Hs.656799 NM_013441 HPRD:05792 RCAN3 DSCR1L2|MCIP3|RCN3|hRCN3 RCAN family member 3 protein-coding Atac153_MAPQ30_peak_4061 chr20 31199869 31199869 + 3.83555 NA Intergenic Intergenic 24588 NR_034152 149950 Hs.516980 NM_001010976 HPRD:17304 LOC149950 - uncharacterized LOC149950 ncRNA Atac153_MAPQ30_peak_5544 chr5 179567897 179567897 + 3.83555 NA intron (NM_175062, intron 1 of 13) intron (NM_175062, intron 1 of 13) 68233 NM_175062 255426 Hs.190559 NM_175062 HPRD:15212 RASGEF1C - RasGEF domain family, member 1C protein-coding Atac153_MAPQ30_peak_2392 chr16 11132909 11132909 + 3.83555 NA intron (NM_015226, intron 12 of 22) MER113|DNA|hAT-Charlie 94564 NM_001243403 23274 Hs.35490 NM_015226 HPRD:17185 CLEC16A Gop-1|KIAA0350 C-type lectin domain family 16, member A protein-coding Atac153_MAPQ30_peak_160 chr1 29788543 29788543 + 3.83555 NA Intergenic Intergenic -111917 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LOC101928460 - uncharacterized LOC101928460 ncRNA Atac153_MAPQ30_peak_5616 chr6 24845321 24845321 + 3.83555 NA intron (NM_001286447, intron 12 of 13) intron (NM_001286447, intron 12 of 13) 32272 NM_015864 9750 Hs.559459 NM_014722 HPRD:12881 FAM65B C6orf32|DIFF40|DIFF48|MYONAP|PL48 family with sequence similarity 65, member B protein-coding Atac153_MAPQ30_peak_5216 chr5 1481007 1481007 + 3.83555 NA intron (NM_024830, intron 7 of 13) intron (NM_024830, intron 7 of 13) 29964 NR_106723 102466103 NR_106723 MIR6075 hsa-mir-6075 microRNA 6075 ncRNA Atac153_MAPQ30_peak_2350 chr16 367516 367516 + 3.83555 NA intron (NM_003502, intron 2 of 10) intron (NM_003502, intron 2 of 10) 34398 NM_006849 64714 Hs.66581 NM_006849 HPRD:07617 PDIA2 PDA2|PDI|PDIP|PDIR protein disulfide isomerase family A, member 2 protein-coding Atac153_MAPQ30_peak_3206 chr19 6595860 6595860 + 3.83555 NA Intergenic Intergenic -4697 NM_001252 970 Hs.501497 NM_001252 HPRD:18515 CD70 CD27L|CD27LG|TNFSF7 CD70 molecule protein-coding Atac153_MAPQ30_peak_6826 chr9 133491905 133491905 + 3.83555 NA intron (NM_003934, intron 7 of 18) intron (NM_003934, intron 7 of 18) -9779 NR_106915 102465515 NR_106915 MIR6856 hsa-mir-6856 microRNA 6856 ncRNA Atac153_MAPQ30_peak_4104 chr20 41304972 41304972 + 3.83555 NA intron (NM_133170, intron 7 of 31) Tigger9b|DNA|TcMar-Tigger -9151 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA Atac153_MAPQ30_peak_5767 chr6 118665265 118665265 + 3.83555 NA Intergenic LTR40a|LTR|ERVL -157271 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo Atac153_MAPQ30_peak_4098 chr20 39554638 39554638 + 3.83555 NA Intergenic Intergenic -102824 NM_003286 7150 Hs.472737 NM_003286 HPRD:00535 TOP1 TOPI topoisomerase (DNA) I protein-coding Atac153_MAPQ30_peak_4840 chr3 129659682 129659682 + 3.83555 NA Intergenic MER115|DNA|hAT-Tip100 -33554 NM_007117 7200 Hs.182231 NM_007117 HPRD:08944 TRH Pro-TRH|TRF thyrotropin-releasing hormone protein-coding Atac153_MAPQ30_peak_5729 chr6 87184902 87184902 + 3.83555 NA Intergenic HERVS71-int|LTR|ERV1 -462122 NM_000865 3354 Hs.1611 NM_000865 HPRD:01635 HTR1E 5-HT1E 5-hydroxytryptamine (serotonin) receptor 1E, G protein-coupled protein-coding Atac153_MAPQ30_peak_4392 chr22 30411977 30411977 + 3.83555 NA intron (NM_021090, intron 14 of 19) L2a|LINE|L2 8939 NR_106876 102466742 NR_106876 MIR6818 hsa-mir-6818 microRNA 6818 ncRNA Atac153_MAPQ30_peak_3459 chr2 25390506 25390506 + 3.83555 NA intron (NM_001035256, intron 1 of 3) intron (NM_001035256, intron 1 of 3) 1053 NM_000939 5443 Hs.1897 NM_000939 HPRD:01462 POMC ACTH|CLIP|LPH|MSH|NPP|POC proopiomelanocortin protein-coding Atac153_MAPQ30_peak_6154 chr7 134391105 134391105 + 3.83555 NA Intergenic AluJr|SINE|Alu 59574 NM_001293085 669 Hs.198365 NM_001724 HPRD:01961 BPGM DPGM 2,3-bisphosphoglycerate mutase protein-coding Atac153_MAPQ30_peak_5911 chr7 6647243 6647243 + 3.83555 NA intron (NM_024067, intron 5 of 5) CpG -8284 NM_017560 54753 Hs.592170 NM_017560 ENSG00000236609 ZNF853 - zinc finger protein 853 protein-coding Atac153_MAPQ30_peak_5829 chr6 160294633 160294633 + 3.83555 NA Intergenic Intergenic -33341 NM_002377 4142 Hs.99900 NM_002377 HPRD:01306 MAS1 MAS|MGRA MAS1 proto-oncogene, G protein-coupled receptor protein-coding Atac153_MAPQ30_peak_676 chr10 16479617 16479617 + 3.83555 NA intron (NM_001001484, intron 2 of 5) AluJo|SINE|Alu 675 NM_030664 9317 Hs.444321 NM_030664 HPRD:16061 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding Atac153_MAPQ30_peak_1480 chr12 29309671 29309671 + 3.83555 NA intron (NM_001271783, intron 1 of 11) MER5A|DNA|hAT-Charlie 7735 NM_001271783 55711 Hs.728955 NM_018099 HPRD:14723 FAR2 MLSTD1|SDR10E2 fatty acyl CoA reductase 2 protein-coding Atac153_MAPQ30_peak_5529 chr5 177697819 177697819 + 3.83555 NA intron (NM_173465, intron 5 of 28) MLT1K|LTR|ERVL-MaLR -37996 NR_103509 85007 Hs.248746 NM_153373 HPRD:18482 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding Atac153_MAPQ30_peak_5701 chr6 46542627 46542627 + 3.83555 NA intron (NM_001278738, intron 10 of 11) L1PA15|LINE|L1 77940 NM_016593 51302 Hs.387367 NM_016593 HPRD:07067 CYP39A1 - cytochrome P450, family 39, subfamily A, polypeptide 1 protein-coding Atac153_MAPQ30_peak_3288 chr19 36046730 36046730 + 3.83555 NA intron (NM_000704, intron 12 of 21) intron (NM_000704, intron 12 of 21) 7830 NM_000704 495 Hs.36992 NM_000704 HPRD:00668 ATP4A ATP6A ATPase, H+/K+ exchanging, alpha polypeptide protein-coding Atac153_MAPQ30_peak_2321 chr15 92817063 92817063 + 3.83555 NA Intergenic Intergenic -120077 NM_006011 8128 Hs.302341 NM_006011 HPRD:03969 ST8SIA2 HsT19690|SIAT8B|ST8SIA-II|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding Atac153_MAPQ30_peak_3510 chr2 42161930 42161930 + 3.83555 NA TTS (NM_001242815) TTS (NM_001242815) -1067 NR_110262 101929723 Hs.369330 NR_110262 LOC101929723 - uncharacterized LOC101929723 ncRNA Atac153_MAPQ30_peak_2609 chr16 85135684 85135684 + 3.83555 NA intron (NM_198491, intron 6 of 7) intron (NM_198491, intron 6 of 7) 10430 NM_198491 339145 Hs.125713 NM_198491 HPRD:13488 FAM92B - family with sequence similarity 92, member B protein-coding Atac153_MAPQ30_peak_3736 chr2 131816444 131816444 + 3.83555 NA intron (NM_001009993, intron 3 of 6) L1MA10|LINE|L1 34560 NM_001009993 130074 Hs.534679 NM_001009993 HPRD:17295 FAM168B MANI family with sequence similarity 168, member B protein-coding Atac153_MAPQ30_peak_3626 chr2 96911312 96911312 + 3.83555 NA Intergenic Intergenic 20439 NM_017849 55654 Hs.164303 NM_017849 TMEM127 - transmembrane protein 127 protein-coding Atac153_MAPQ30_peak_4712 chr3 53853168 53853168 + 3.83555 NA intron (NM_018397, intron 7 of 8) intron (NM_018397, intron 7 of 8) 27252 NM_018397 55349 Hs.126688 NM_018397 CHDH - choline dehydrogenase protein-coding Atac153_MAPQ30_peak_5530 chr5 177764593 177764593 + 3.83555 NA intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) -104770 NR_103509 85007 Hs.248746 NM_153373 HPRD:18482 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding Atac153_MAPQ30_peak_378 chr1 153602192 153602192 + 3.83555 NA intron (NM_006271, intron 1 of 2) intron (NM_006271, intron 1 of 2) 1319 NM_006271 6271 Hs.515715 NM_006271 HPRD:01489 S100A1 S100|S100-alpha|S100A S100 calcium binding protein A1 protein-coding Atac153_MAPQ30_peak_1971 chr14 69972169 69972169 + 3.83555 NA intron (NM_001161498, intron 6 of 12) intron (NM_001161498, intron 6 of 12) 20698 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 protein-coding Atac153_MAPQ30_peak_4634 chr3 38520658 38520658 + 3.83555 NA exon (NM_001106, exon 6 of 11) exon (NM_001106, exon 6 of 11) -17105 NM_005107 9941 Hs.517897 NM_005107 HPRD:06813 EXOG ENDOGL1|ENDOGL2|ENGL|ENGL-a|ENGL-b|ENGLA|ENGLB endo/exonuclease (5'-3'), endonuclease G-like protein-coding Atac153_MAPQ30_peak_3953 chr2 240754914 240754914 + 3.83555 NA Intergenic Intergenic 70360 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA Atac153_MAPQ30_peak_7213 chrX 131264463 131264463 + 3.83555 NA Intergenic Intergenic -2413 NM_194277 90167 Hs.170776 NM_194277 HPRD:06624 FRMD7 NYS|NYS1|XIPAN FERM domain containing 7 protein-coding Atac153_MAPQ30_peak_425 chr1 167044913 167044913 + 3.83555 NA intron (NM_005814, intron 1 of 6) L2a|LINE|L2 14955 NM_005814 10223 Hs.651244 NM_005814 HPRD:03704 GPA33 A33 glycoprotein A33 (transmembrane) protein-coding Atac153_MAPQ30_peak_2256 chr15 76108285 76108285 + 3.83555 NA Intergenic Intergenic -27342 NM_173469 92912 Hs.23033 NM_173469 HPRD:14294 UBE2Q2 - ubiquitin-conjugating enzyme E2Q family member 2 protein-coding Atac153_MAPQ30_peak_6225 chr7 157619682 157619682 + 3.83555 NA intron (NM_130842, intron 11 of 21) intron (NM_130842, intron 11 of 21) -27595 NR_038966 100506585 Hs.661265 NR_038966 ENSG00000233038 LOC100506585 - uncharacterized LOC100506585 ncRNA Atac153_MAPQ30_peak_4675 chr3 49362454 49362454 + 3.83555 NA exon (NM_199443, exon 5 of 21) exon (NM_199443, exon 5 of 21) 15082 NM_001251877 7375 Hs.77500 NM_003363 HPRD:04598 USP4 UNP|Unph ubiquitin specific peptidase 4 (proto-oncogene) protein-coding Atac153_MAPQ30_peak_2791 chr17 30555773 30555773 + 3.83555 NA Intergenic AluSz|SINE|Alu -37422 NM_138328 162494 Hs.655027 NM_138328 HPRD:07501 RHBDL3 RHBDL4|VRHO rhomboid, veinlet-like 3 (Drosophila) protein-coding Atac153_MAPQ30_peak_1037 chr11 1528228 1528228 + 3.83555 NA Intergenic Intergenic -20219 NM_001172223 81532 Hs.370360 NM_053005 MOB2 HCCA2 MOB kinase activator 2 protein-coding Atac153_MAPQ30_peak_2559 chr16 70747266 70747266 + 3.83555 NA intron (NM_018052, intron 14 of 18) intron (NM_018052, intron 14 of 18) -27312 NM_138383 92154 Hs.432387 NM_138383 HPRD:14289 MTSS1L ABBA-1 metastasis suppressor 1-like protein-coding Atac153_MAPQ30_peak_1657 chr12 114535859 114535859 + 3.83555 NA Intergenic Intergenic -131683 NM_001146699 9904 Hs.7482 NM_016196 HPRD:15225 RBM19 - RNA binding motif protein 19 protein-coding Atac153_MAPQ30_peak_5886 chr7 1642094 1642094 + 3.83555 NA Intergenic MIR|SINE|MIR -12012 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo Atac153_MAPQ30_peak_3919 chr2 236096654 236096654 + 3.83555 NA Intergenic Intergenic 236026 NM_014521 23677 Hs.516777 NM_014521 HPRD:09285 SH3BP4 BOG25|TTP SH3-domain binding protein 4 protein-coding Atac153_MAPQ30_peak_4038 chr20 24187725 24187725 + 3.83555 NA intron (NR_040102, intron 1 of 3) intron (NR_040102, intron 1 of 3) 7322 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 FLJ33581 - uncharacterized LOC400839 ncRNA Atac153_MAPQ30_peak_6686 chr9 92720513 92720513 + 3.83555 NA Intergenic Intergenic -11185 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA Atac153_MAPQ30_peak_5226 chr5 3286263 3286263 + 3.83555 NA Intergenic Intergenic 108314 NR_104617 102467074 Hs.575250 NR_104617 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA Atac153_MAPQ30_peak_4281 chr21 40286722 40286722 + 3.83555 NA intron (NR_120405, intron 2 of 3) MIRc|SINE|MIR 23631 NR_120405 400867 Hs.689509 NR_120405 LOC400867 - uncharacterized LOC400867 ncRNA Atac153_MAPQ30_peak_2195 chr15 65193223 65193223 + 3.83555 NA Intergenic MLT1H1|LTR|ERVL-MaLR -10878 NM_182703 348094 Hs.207157 NM_182703 HPRD:14178 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding Atac153_MAPQ30_peak_7025 chrX 49068034 49068034 + 3.83555 NA intron (NM_005183, intron 35 of 47) intron (NM_005183, intron 35 of 47) -11373 NM_003179 6855 Hs.632804 NM_003179 HPRD:02435 SYP MRX96|MRXSYP synaptophysin protein-coding Atac153_MAPQ30_peak_2700 chr17 9939545 9939545 + 3.83555 NA intron (NM_201433, intron 1 of 13) intron (NM_201433, intron 1 of 13) 519 NM_201432 8522 Hs.462214 NM_003644 HPRD:16011 GAS7 MLL/GAS7 growth arrest-specific 7 protein-coding Atac153_MAPQ30_peak_5167 chr4 154037203 154037203 + 3.83555 NA Intergenic Intergenic -37067 NM_001130067 23321 Hs.435711 NM_015271 HPRD:10279 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding Atac153_MAPQ30_peak_984 chr10 130067196 130067196 + 3.83555 NA Intergenic Intergenic -17018 NR_120619 101927381 Hs.523342 NR_120619 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA Atac153_MAPQ30_peak_2028 chr14 92763388 92763388 + 3.83555 NA Intergenic Intergenic -25537 NM_153648 123041 Hs.385530 NM_153646 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 protein-coding Atac153_MAPQ30_peak_2209 chr15 67323881 67323881 + 3.83555 NA Intergenic MIR3|SINE|MIR -34314 NM_005902 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Atac153_MAPQ30_peak_4992 chr4 6303463 6303463 + 3.83555 NA exon (NM_001145853, exon 8 of 8) exon (NM_001145853, exon 8 of 8) 31886 NM_006005 7466 Hs.518602 NM_006005 HPRD:05864 WFS1 CTRCT41|WFRS|WFS|WFSL Wolfram syndrome 1 (wolframin) protein-coding Atac153_MAPQ30_peak_6372 chr8 48609366 48609366 + 3.83555 NA intron (NR_104581, intron 8 of 16) intron (NR_104581, intron 8 of 16) 41360 NM_005195 1052 Hs.440829 NM_005195 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT/enhancer binding protein (C/EBP), delta protein-coding Atac153_MAPQ30_peak_1168 chr11 45342349 45342349 + 3.83555 NA Intergenic Intergenic -34465 NM_001247987 57586 Hs.436643 NM_020826 HPRD:12128 SYT13 - synaptotagmin XIII protein-coding Atac153_MAPQ30_peak_2536 chr16 66376958 66376958 + 3.83555 NA Intergenic Intergenic -23567 NM_001795 1003 Hs.76206 NM_001795 HPRD:03075 CDH5 7B4|CD144 cadherin 5, type 2 (vascular endothelium) protein-coding Atac153_MAPQ30_peak_4584 chr3 14334175 14334175 + 3.83555 NA Intergenic Tigger1|DNA|TcMar-Tigger 59893 NR_110135 101927565 Hs.306905 NR_110135 ENSG00000251576 LINC01267 - long intergenic non-protein coding RNA 1267 ncRNA Atac153_MAPQ30_peak_3750 chr2 133279977 133279977 + 3.83555 NA intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 105830 NM_001508 2863 Hs.432395 NM_001508 HPRD:04198 GPR39 - G protein-coupled receptor 39 protein-coding Atac153_MAPQ30_peak_6255 chr8 2401281 2401281 + 3.83555 NA intron (NR_125425, intron 5 of 5) Tigger7|DNA|TcMar-Tigger 79172 NR_125423 101927815 Hs.571467 NR_125423 ENSG00000249694 LOC101927815 - uncharacterized LOC101927815 ncRNA Atac153_MAPQ30_peak_5597 chr6 14145887 14145887 + 3.83555 NA Intergenic Intergenic 28022 NM_004233 9308 Hs.595133 NM_004233 HPRD:05170 CD83 BL11|HB15 CD83 molecule protein-coding Atac153_MAPQ30_peak_5472 chr5 158308206 158308206 + 3.83555 NA intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 218582 NM_001290360 1879 Hs.573143 NM_024007 HPRD:01256 EBF1 COE1|EBF|O/E-1|OLF1 early B-cell factor 1 protein-coding Atac153_MAPQ30_peak_3399 chr2 7574319 7574319 + 3.83555 NA intron (NR_038432, intron 4 of 5) LTR16A|LTR|ERVL 12927 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA Atac153_MAPQ30_peak_3124 chr18 57388609 57388609 + 3.83555 NA Intergenic Intergenic -23965 NM_133459 147372 Hs.34333 NM_133459 HPRD:08703 CCBE1 - collagen and calcium binding EGF domains 1 protein-coding Atac153_MAPQ30_peak_3946 chr2 239800698 239800698 + 3.83555 NA intron (NM_001271893, intron 1 of 1) intron (NM_001271893, intron 1 of 1) 44025 NM_001271893 117581 Hs.422585 NM_057179 HPRD:09616 TWIST2 DERMO1|FFDD3|SETLSS|bHLHa39 twist family bHLH transcription factor 2 protein-coding Atac153_MAPQ30_peak_3266 chr19 30262760 30262760 + 3.83555 NA Intergenic MLT1C|LTR|ERVL-MaLR -40141 NM_001238 898 Hs.244723 NM_001238 HPRD:00455 CCNE1 CCNE cyclin E1 protein-coding Atac153_MAPQ30_peak_5182 chr4 169248275 169248275 + 3.83555 NA Intergenic MLT1F|LTR|ERVL-MaLR -8317 NM_017631 55601 Hs.591710 NM_017631 HPRD:07877 DDX60 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 protein-coding Atac153_MAPQ30_peak_502 chr1 205181281 205181281 + 3.83555 NA promoter-TSS (NM_015375) promoter-TSS (NM_015375) -554 NM_199462 25778 Hs.6874 NM_015375 HPRD:11495 DSTYK CAKUT1|DustyPK|RIP5|RIPK5 dual serine/threonine and tyrosine protein kinase protein-coding Atac153_MAPQ30_peak_26 chr1 4676538 4676538 + 3.83555 NA Intergenic Intergenic -38567 NM_001042478 55966 Hs.25924 NM_018836 HPRD:15339 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding Atac153_MAPQ30_peak_6764 chr9 116885230 116885230 + 3.83555 NA Intergenic Intergenic -23893 NM_138424 113220 Hs.28149 NM_138424 HPRD:13914 KIF12 - kinesin family member 12 protein-coding Atac153_MAPQ30_peak_842 chr10 86669583 86669583 + 3.83555 NA Intergenic Intergenic 289078 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA Atac153_MAPQ30_peak_6176 chr7 141580932 141580932 + 3.83555 NA Intergenic L1P4a|LINE|L1 -37744 NM_001001656 130075 Hs.690171 NM_001001656 HPRD:17797 OR9A4 - olfactory receptor, family 9, subfamily A, member 4 protein-coding Atac153_MAPQ30_peak_4578 chr3 13893155 13893155 + 3.83555 NA intron (NM_004625, intron 3 of 3) L2c|LINE|L2 28463 NM_004625 7476 Hs.72290 NM_004625 WNT7A - wingless-type MMTV integration site family, member 7A protein-coding Atac153_MAPQ30_peak_989 chr10 130285937 130285937 + 3.83555 NA Intergenic Intergenic 201723 NR_120619 101927381 Hs.523342 NR_120619 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA Atac153_MAPQ30_peak_1306 chr11 106073308 106073308 + 3.83555 NA Intergenic MLT1N2|LTR|ERVL-MaLR -47438 NR_120552 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA Atac153_MAPQ30_peak_884 chr10 104341681 104341681 + 3.83555 NA intron (NM_016169, intron 3 of 11) intron (NM_016169, intron 3 of 11) -62571 NM_030912 81603 Hs.336810 NM_030912 HPRD:06934 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding Atac153_MAPQ30_peak_6240 chr8 954906 954906 + 3.83555 NA intron (NR_073397, intron 3 of 3) intron (NR_073397, intron 3 of 3) 267301 NR_073397 619343 Hs.667939 NR_073397 ERICH1-AS1 C8orf68 ERICH1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6866 chr9 139945312 139945312 + 3.83555 NA intron (NM_203468, intron 5 of 8) intron (NM_203468, intron 5 of 8) 3191 NM_203468 954 Hs.123036 NM_001246 HPRD:03600 ENTPD2 CD39L1|NTPDase-2 ectonucleoside triphosphate diphosphohydrolase 2 protein-coding Atac153_MAPQ30_peak_2183 chr15 60184132 60184132 + 3.83555 NA Intergenic Intergenic -112289 NM_012182 27023 Hs.734475 NM_012182 HPRD:07017 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding Atac153_MAPQ30_peak_6813 chr9 130444301 130444301 + 3.83555 NA intron (NM_001032221, intron 17 of 18) intron (NM_001032221, intron 17 of 18) 8773 NR_037473 100500872 NR_037473 miRBase:MI0016415 MIR3911 - microRNA 3911 ncRNA Atac153_MAPQ30_peak_727 chr10 44855349 44855349 + 3.83555 NA Intergenic Intergenic 25196 NM_000609 6387 Hs.522891 NM_000609 HPRD:02904 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 chemokine (C-X-C motif) ligand 12 protein-coding Atac153_MAPQ30_peak_3821 chr2 196382779 196382779 + 3.83555 NA Intergenic Intergenic -138753 NM_001127257 57181 Hs.650158 NM_020342 HPRD:10572 SLC39A10 LZT-Hs2 solute carrier family 39 (zinc transporter), member 10 protein-coding Atac153_MAPQ30_peak_5929 chr7 24932206 24932206 + 3.83555 NA promoter-TSS (NM_145322) promoter-TSS (NM_145322) 34 NR_104111 26031 Hs.520259 NM_015550 HPRD:09474 OSBPL3 ORP-3|ORP3|OSBP3 oxysterol binding protein-like 3 protein-coding Atac153_MAPQ30_peak_5301 chr5 38451230 38451230 + 3.83555 NA intron (NM_182798, intron 13 of 16) intron (NM_182798, intron 13 of 16) 5652 NM_182801 133584 Hs.20103 NM_152403 HPRD:13433 EGFLAM AGRINL|AGRNL|PIKA EGF-like, fibronectin type III and laminin G domains protein-coding Atac153_MAPQ30_peak_811 chr10 79079549 79079549 + 3.83555 NA intron (NM_001271518, intron 1 of 27) MLT1I|LTR|ERVL-MaLR 178960 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_5516 chr5 175594905 175594905 + 3.83555 NA intron (NR_036494, intron 15 of 25) L1MC4|LINE|L1 31393 NR_036494 643201 Hs.390285 NR_036494 ENSG00000248596 LOC643201 - centrosomal protein 192kDa pseudogene pseudo Atac153_MAPQ30_peak_4899 chr3 159531824 159531824 + 3.83555 NA intron (NM_014575, intron 2 of 7) LTR16A|LTR|ERVL -25826 NM_001197109 29970 Hs.134665 NM_014575 HPRD:15302 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding Atac153_MAPQ30_peak_2578 chr16 75793825 75793825 + 3.83555 NA Intergenic Intergenic 112190 NM_018975 54386 Hs.301419 NM_018975 HPRD:05452 TERF2IP DRIP5|RAP1 telomeric repeat binding factor 2, interacting protein protein-coding Atac153_MAPQ30_peak_6302 chr8 20781285 20781285 + 3.83555 NA Intergenic Intergenic -50212 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LOC286114 - uncharacterized LOC286114 ncRNA Atac153_MAPQ30_peak_5329 chr5 71751227 71751227 + 3.83555 NA intron (NM_152625, intron 3 of 4) intron (NM_152625, intron 3 of 4) 52022 NM_152625 167465 Hs.370303 NM_152625 HPRD:18329 ZNF366 DCSCRIPT zinc finger protein 366 protein-coding Atac153_MAPQ30_peak_910 chr10 111982609 111982609 + 3.83555 NA intron (NM_001008541, intron 1 of 4) intron (NM_001008541, intron 1 of 4) -3153 NM_005962 4601 Hs.602078 NM_005962 HPRD:02486 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding Atac153_MAPQ30_peak_6533 chr8 141352115 141352115 + 3.83555 NA intron (NM_031466, intron 9 of 22) intron (NM_031466, intron 9 of 22) 115746 NM_001160372 83696 Hs.654911 NM_031466 HPRD:18136 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|TRS120 trafficking protein particle complex 9 protein-coding Atac153_MAPQ30_peak_3521 chr2 46464916 46464916 + 3.83555 NA Intergenic Intergenic -59625 NM_001430 2034 Hs.468410 NM_001430 HPRD:06787 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding Atac153_MAPQ30_peak_2945 chr17 75598727 75598727 + 3.83555 NA Intergenic Intergenic 55704 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA Atac153_MAPQ30_peak_3272 chr19 31277886 31277886 + 3.83555 NA Intergenic Intergenic 414558 NM_014717 9745 Hs.378901 NM_014717 HPRD:15825 ZNF536 - zinc finger protein 536 protein-coding Atac153_MAPQ30_peak_6470 chr8 123864955 123864955 + 3.83555 NA intron (NM_014943, intron 1 of 3) intron (NM_014943, intron 1 of 3) 71054 NM_014943 22882 Hs.377090 NM_014943 HPRD:16458 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding Atac153_MAPQ30_peak_3434 chr2 18045316 18045316 + 3.83555 NA Intergenic Intergenic -13798 NM_001282428 3790 Hs.414489 NM_002252 HPRD:04865 KCNS3 KV9.3 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 protein-coding Atac153_MAPQ30_peak_4955 chr4 836469 836469 + 3.83555 NA Intergenic L1MEc|LINE|L1 -16524 NM_006651 10815 Hs.478930 NM_006651 HPRD:09233 CPLX1 CPX-I|CPX1 complexin 1 protein-coding Atac153_MAPQ30_peak_6512 chr8 136823583 136823583 + 3.83555 NA Intergenic Intergenic 353867 NM_006558 10656 Hs.444558 NM_006558 HPRD:10007 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH domain containing, RNA binding, signal transduction associated 3 protein-coding Atac153_MAPQ30_peak_2217 chr15 68571219 68571219 + 3.83555 NA intron (NM_015322, intron 1 of 1) intron (NM_015322, intron 1 of 1) 1078 NM_015322 10116 Hs.362733 NM_015322 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog b (C. elegans) protein-coding Atac153_MAPQ30_peak_692 chr10 24030980 24030980 + 3.83555 NA intron (NM_001098500, intron 1 of 18) L2|LINE|L2 47305 NM_001098500 56243 Hs.445885 NM_019590 HPRD:11132 KIAA1217 SKT KIAA1217 protein-coding Atac153_MAPQ30_peak_1393 chr11 130475011 130475011 + 3.83555 NA Intergenic Intergenic -61619 NR_107019 102466873 NR_107019 MIR8052 hsa-mir-8052 microRNA 8052 ncRNA Atac153_MAPQ30_peak_3093 chr18 46292031 46292031 + 3.83555 NA intron (NM_014772, intron 9 of 11) intron (NM_014772, intron 9 of 11) 95060 NR_039897 100616366 NR_039897 MIR4743 - microRNA 4743 ncRNA Atac153_MAPQ30_peak_5505 chr5 173760038 173760038 + 3.83555 NA Intergenic Intergenic -3319 NR_125806 101928176 Hs.436014 NR_125806 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA Atac153_MAPQ30_peak_4563 chr3 11427202 11427202 + 3.83555 NA intron (NM_001144912, intron 16 of 16) L2c|LINE|L2 113192 NM_001144912 10533 Hs.38032 NM_006395 HPRD:12293 ATG7 APG7-LIKE|APG7L|GSA7 autophagy related 7 protein-coding Atac153_MAPQ30_peak_4166 chr20 53377359 53377359 + 3.83555 NA Intergenic AluJo|SINE|Alu 285102 NM_177959 55816 Hs.473133 NM_018431 HPRD:16317 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding Atac153_MAPQ30_peak_4409 chr22 33205065 33205065 + 3.83555 NA intron (NM_000362, intron 1 of 4) intron (NM_000362, intron 1 of 4) 8263 NM_000362 7078 Hs.644633 NM_000362 HPRD:01785 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding Atac153_MAPQ30_peak_6592 chr9 16265510 16265510 + 3.83555 NA intron (NR_073471, intron 1 of 3) intron (NR_073471, intron 1 of 3) 10801 NR_073471 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding Atac153_MAPQ30_peak_31 chr1 5429240 5429240 + 3.83555 NA Intergenic Intergenic -194891 NR_039612 100616489 NR_039612 miRBase:MI0016753 MIR4417 - microRNA 4417 ncRNA Atac153_MAPQ30_peak_2613 chr16 85795764 85795764 + 3.83555 NA Intergenic Intergenic -11075 NM_206967 404550 Hs.461655 NM_206967 HPRD:14460 C16orf74 - chromosome 16 open reading frame 74 protein-coding Atac153_MAPQ30_peak_287 chr1 71193541 71193541 + 3.83555 NA Intergenic L1PA11|LINE|L1 316640 NM_001902 1491 Hs.19904 NM_001902 HPRD:09633 CTH - cystathionine gamma-lyase protein-coding Atac153_MAPQ30_peak_5310 chr5 56103793 56103793 + 3.83555 NA Intergenic L2b|LINE|L2 -7107 NM_005921 4214 Hs.653654 NM_005921 ENSG00000095015 MAP3K1 MAPKKK1|MEKK|MEKK 1|MEKK1|SRXY6 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_4194 chr20 58883367 58883367 + 3.83555 NA intron (NR_046099, intron 3 of 4) LTR67B|LTR|ERVL 164667 NR_109903 101928048 Hs.572803 NR_109903 LOC101928048 - uncharacterized LOC101928048 ncRNA Atac153_MAPQ30_peak_2969 chr17 79828109 79828109 + 3.83555 NA intron (NM_001301242, intron 1 of 6) intron (NM_001301242, intron 1 of 6) 741 NM_001185077 396 Hs.159161 NM_004309 HPRD:03565 ARHGDIA GDIA1|HEL-S-47e|NPHS8|RHOGDI|RHOGDI-1 Rho GDP dissociation inhibitor (GDI) alpha protein-coding Atac153_MAPQ30_peak_2405 chr16 12513808 12513808 + 3.83555 NA intron (NM_032167, intron 18 of 20) intron (NM_032167, intron 18 of 20) -300370 NR_039869 100616195 NR_039869 miRBase:MI0017353 MIR4718 - microRNA 4718 ncRNA Atac153_MAPQ30_peak_6704 chr9 96408008 96408008 + 3.83555 NA exon (NM_005392, exon 4 of 22) exon (NM_005392, exon 4 of 22) 69099 NM_005392 5253 Hs.211441 NM_005392 HPRD:05071 PHF2 CENP-35|GRC5|JHDM1E PHD finger protein 2 protein-coding Atac153_MAPQ30_peak_5143 chr4 123508781 123508781 + 3.83555 NA Intergenic Intergenic -31357 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4809 chr3 124248063 124248063 + 3.83555 NA intron (NM_001024660, intron 33 of 59) intron (NM_001024660, intron 33 of 59) -55443 NM_007064 8997 Hs.8004 NM_003947 HPRD:06859 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin, RhoGEF kinase protein-coding Atac153_MAPQ30_peak_6012 chr7 51358848 51358848 + 3.83555 NA intron (NM_001287436, intron 1 of 13) intron (NM_001287436, intron 1 of 13) 25667 NM_015198 23242 Hs.99141 NM_015198 HPRD:10843 COBL - cordon-bleu WH2 repeat protein protein-coding Atac153_MAPQ30_peak_3032 chr18 22089730 22089730 + 3.83555 NA Intergenic THE1C|LTR|ERVL-MaLR 49137 NM_021624 59340 Hs.287388 NM_021624 HPRD:06004 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding Atac153_MAPQ30_peak_6009 chr7 51081050 51081050 + 3.83555 NA Intergenic Intergenic -219891 NM_001001555 2887 Hs.164060 NM_005311 HPRD:03312 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor-bound protein 10 protein-coding Atac153_MAPQ30_peak_660 chr10 8390204 8390204 + 3.83555 NA Intergenic L2b|LINE|L2 -79936 NR_108058 100507143 Hs.258979 NR_108058 ENSG00000232170 LINC00708 GS1-756B1.2 long intergenic non-protein coding RNA 708 ncRNA Atac153_MAPQ30_peak_4495 chr22 47384990 47384990 + 3.83555 NA intron (NM_001284303, intron 7 of 10) Tigger1|DNA|TcMar-Tigger -73052 NR_122047 642757 Hs.632786 NR_122047 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3033 chr18 22120844 22120844 + 3.83555 NA Intergenic Intergenic 80251 NM_021624 59340 Hs.287388 NM_021624 HPRD:06004 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding Atac153_MAPQ30_peak_671 chr10 13736882 13736882 + 3.83555 NA intron (NM_018027, intron 14 of 24) intron (NM_018027, intron 14 of 24) 107943 NM_003675 8559 Hs.729158 NM_003675 HPRD:05407 PRPF18 PRP18|hPrp18 pre-mRNA processing factor 18 protein-coding Atac153_MAPQ30_peak_5672 chr6 40449641 40449641 + 3.83555 NA intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 103478 NR_024015 732253 Hs.180197 NR_024015 ENSG00000204091 TDRG1 LINC00532 testis development related 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4525 chr22 49980902 49980902 + 3.83555 NA intron (NR_110523, intron 1 of 4) intron (NR_110523, intron 1 of 4) 70288 NR_110522 348645 Hs.133159 NM_198851 HPRD:14180 C22orf34 - chromosome 22 open reading frame 34 protein-coding Atac153_MAPQ30_peak_5294 chr5 35003283 35003283 + 3.83555 NA intron (NM_031900, intron 13 of 13) intron (NM_031900, intron 13 of 13) 44957 NM_031900 64902 Hs.34494 NM_031900 HPRD:10638 AGXT2 AGT2|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding Atac153_MAPQ30_peak_2679 chr17 5850582 5850582 + 3.83555 NA Intergenic Intergenic -123352 NM_015253 23302 Hs.370166 NM_015253 HPRD:17193 WSCD1 - WSC domain containing 1 protein-coding Atac153_MAPQ30_peak_5461 chr5 153991383 153991383 + 3.83555 NA Intergenic Intergenic -15751 NR_036094 100422950 NR_036094 miRBase:MI0014165 MIR3141 - microRNA 3141 ncRNA Atac153_MAPQ30_peak_2847 chr17 45896531 45896531 + 3.83555 NA intron (NM_145798, intron 4 of 22) intron (NM_145798, intron 4 of 22) 2616 NM_145798 114881 Hs.463320 NM_017731 HPRD:09477 OSBPL7 ORP7 oxysterol binding protein-like 7 protein-coding Atac153_MAPQ30_peak_6089 chr7 100348302 100348302 + 3.83555 NA exon (NM_173059, exon 12 of 46) exon (NM_173059, exon 12 of 46) 17053 NR_111917 7455 Hs.307004 NM_003386 HPRD:03846 ZAN - zonadhesin protein-coding Atac153_MAPQ30_peak_2038 chr14 95025635 95025635 + 3.83555 NA Intergenic Intergenic -2122 NM_006215 5267 Hs.719893 NM_006215 HPRD:01004 SERPINA4 KAL|KLST|KST|PI-4|PI4|kallistatin serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4 protein-coding Atac153_MAPQ30_peak_1620 chr12 108655830 108655830 + 3.83555 NA Intergenic Intergenic 58609 NM_001142345 1240 Hs.197143 NM_004072 HPRD:03829 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemokine-like receptor 1 protein-coding Atac153_MAPQ30_peak_3207 chr19 6684864 6684864 + 3.83555 NA intron (NM_000064, intron 30 of 40) intron (NM_000064, intron 30 of 40) -14265 NM_172014 8740 Hs.129708 NM_003807 HPRD:05157 TNFSF14 CD258|HVEML|LIGHT|LTg|TR2 tumor necrosis factor (ligand) superfamily, member 14 protein-coding Atac153_MAPQ30_peak_2632 chr16 87837141 87837141 + 3.83555 NA Intergenic MLT1H1|LTR|ERVL-MaLR -24387 NR_120309 102724467 Hs.587857 NR_120309 LOC102724467 - uncharacterized LOC102724467 ncRNA Atac153_MAPQ30_peak_1138 chr11 34043891 34043891 + 3.83555 NA Intergenic MLT1H1|LTR|ERVL-MaLR -29339 NM_005898 4076 Hs.471818 NM_005898 HPRD:03108 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding Atac153_MAPQ30_peak_3255 chr19 24060406 24060406 + 3.83555 NA Intergenic Intergenic -37278 NM_001244038 730087 Hs.655305 NM_001190829 ZNF726 - zinc finger protein 726 protein-coding Atac153_MAPQ30_peak_79 chr1 14600960 14600960 + 3.83555 NA Intergenic Intergenic -324253 NM_015209 23254 Hs.368823 NM_015209 HPRD:11122 KAZN KAZ kazrin, periplakin interacting protein protein-coding Atac153_MAPQ30_peak_4030 chr20 22785822 22785822 + 3.83555 NA Intergenic Intergenic -197667 NR_109883 101929685 Hs.563018 NR_109883 LINC01384 - long intergenic non-protein coding RNA 1384 ncRNA Atac153_MAPQ30_peak_6855 chr9 138131488 138131488 + 3.83555 NA Intergenic Intergenic 58033 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA Atac153_MAPQ30_peak_3458 chr2 24658240 24658240 + 3.83555 NA Intergenic Intergenic -74843 NM_006277 50618 Hs.432562 NM_006277 HPRD:09193 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding Atac153_MAPQ30_peak_6568 chr8 145704214 145704214 + 3.83555 NA Intergenic Intergenic -2496 NM_003923 8928 Hs.708365 NM_003923 HPRD:04689 FOXH1 FAST-1|FAST1 forkhead box H1 protein-coding Atac153_MAPQ30_peak_3246 chr19 17866119 17866119 + 3.83555 NA intron (NM_015122, intron 4 of 28) intron (NM_015122, intron 4 of 28) 3833 NM_001161359 23149 Hs.96485 NM_015122 HPRD:16887 FCHO1 - FCH domain only 1 protein-coding Atac153_MAPQ30_peak_95 chr1 16482816 16482816 + 3.83555 NA promoter-TSS (NM_004431) promoter-TSS (NM_004431) -234 NM_004431 1969 Hs.171596 NM_004431 HPRD:01494 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding Atac153_MAPQ30_peak_6513 chr8 137463470 137463470 + 3.83555 NA Intergenic LTR1|LTR|ERV1 962361 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA Atac153_MAPQ30_peak_1330 chr11 115128895 115128895 + 3.83555 NA intron (NM_001301043, intron 1 of 11) intron (NM_001301043, intron 1 of 11) 246346 NM_014333 23705 Hs.370510 NM_014333 HPRD:05746 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_6038 chr7 67061622 67061622 + 3.83555 NA Intergenic Intergenic 260659 NR_108104 101929736 Hs.634050 NR_108104 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA Atac153_MAPQ30_peak_6434 chr8 98331714 98331714 + 3.83555 NA intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) -41538 NM_033512 85453 Hs.173094 NM_033512 HPRD:15576 TSPYL5 - TSPY-like 5 protein-coding Atac153_MAPQ30_peak_418 chr1 164438021 164438021 + 3.83555 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -90576 NM_001204963 5087 Hs.557097 NM_002585 HPRD:08889 PBX1 - pre-B-cell leukemia homeobox 1 protein-coding Atac153_MAPQ30_peak_6743 chr9 111039819 111039819 + 3.83555 NA Intergenic Intergenic 578456 NM_006686 10880 Hs.534390 NM_006686 ACTL7B Tact1 actin-like 7B protein-coding Atac153_MAPQ30_peak_5680 chr6 41698010 41698010 + 3.83555 NA intron (NM_001167827, intron 1 of 8) intron (NM_001167827, intron 1 of 8) 4129 NM_001271945 7942 Hs.485360 NM_007162 HPRD:02847 TFEB ALPHATFEB|BHLHE35|TCFEB transcription factor EB protein-coding Atac153_MAPQ30_peak_2291 chr15 84513092 84513092 + 3.83555 NA intron (NM_001301110, intron 7 of 29) intron (NM_001301110, intron 7 of 29) 190254 NM_001301110 57188 Hs.459162 NM_207517 HPRD:12426 ADAMTSL3 ADAMTSL-3 ADAMTS-like 3 protein-coding Atac153_MAPQ30_peak_3429 chr2 16176250 16176250 + 3.83555 NA Intergenic Intergenic -94405 NR_110230 10408 Hs.651453 NM_006316 ENSG00000233718 MYCNOS MYCN-AS1|N-CYM|NCYM|NYCM MYCN opposite strand ncRNA Atac153_MAPQ30_peak_7155 chrX 109191760 109191760 + 3.83555 NA Intergenic L1M1|LINE|L1 -54103 NM_017698 84187 Hs.496572 NM_017698 HPRD:06539 TMEM164 bB360B22.3 transmembrane protein 164 protein-coding Atac153_MAPQ30_peak_80 chr1 14655834 14655834 + 3.83555 NA Intergenic MLT1K|LTR|ERVL-MaLR -269379 NM_015209 23254 Hs.368823 NM_015209 HPRD:11122 KAZN KAZ kazrin, periplakin interacting protein protein-coding Atac153_MAPQ30_peak_328 chr1 112686794 112686794 + 3.83555 NA Intergenic Intergenic 153604 NM_001270945 643355 Hs.279714 NM_001270945 LOC643355 - uncharacterized LOC643355 protein-coding Atac153_MAPQ30_peak_2338 chr15 99705783 99705783 + 3.83555 NA intron (NM_001288615, intron 10 of 13) intron (NM_001288615, intron 10 of 13) 60497 NM_145728 23336 Hs.207106 NM_015286 HPRD:07305 SYNM DMN|SYN synemin, intermediate filament protein protein-coding Atac153_MAPQ30_peak_5104 chr4 77816564 77816564 + 3.83555 NA 3' UTR (NM_001029870, exon 1 of 1) 3' UTR (NM_001029870, exon 1 of 1) 2438 NM_001029870 345079 Hs.257292 NM_001029870 HPRD:18789 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding Atac153_MAPQ30_peak_1774 chr13 26474229 26474229 + 3.83555 NA intron (NM_016529, intron 33 of 36) MER72B|LTR|ERV1 150969 NM_001007538 387914 Hs.433791 NM_001007538 HPRD:16589 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding Atac153_MAPQ30_peak_1479 chr12 28970298 28970298 + 3.83555 NA Intergenic HERVL18-int|LTR|ERVL -331638 NM_001271783 55711 Hs.728955 NM_018099 HPRD:14723 FAR2 MLSTD1|SDR10E2 fatty acyl CoA reductase 2 protein-coding Atac153_MAPQ30_peak_6033 chr7 65824942 65824942 + 3.83555 NA 3' UTR (NM_003596, exon 6 of 6) 3' UTR (NM_003596, exon 6 of 6) 40453 NR_026873 285908 Hs.50755 NM_181722 HPRD:14160 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA Atac153_MAPQ30_peak_6854 chr9 138092382 138092382 + 3.83555 NA Intergenic THE1B|LTR|ERVL-MaLR 18927 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA Atac153_MAPQ30_peak_7240 chrX 138647747 138647747 + 3.83555 NA Intergenic MIR3|SINE|MIR 34852 NM_000133 2158 Hs.522798 NM_000133 HPRD:02385 F9 FIX|HEMB|P19|PTC|THPH8 coagulation factor IX protein-coding Atac153_MAPQ30_peak_2634 chr16 88320660 88320660 + 3.83555 NA Intergenic L1ME3F|LINE|L1 92773 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LOC101928880 LA16c-444G7.2 uncharacterized LOC101928880 ncRNA Atac153_MAPQ30_peak_5519 chr5 176124684 176124684 + 3.83555 NA Intergenic LTR16C|LTR|ERVL -45522 NR_108030 102577424 Hs.349025 NR_108030 LOC102577424 - uncharacterized LOC102577424 ncRNA Atac153_MAPQ30_peak_7293 chrX 154003860 154003860 + 3.83555 NA TTS (NR_002984) TTS (NR_002984) 587 NR_002984 677835 Hs.745526 NR_002984 SNORA56 ACA56 small nucleolar RNA, H/ACA box 56 snoRNA Atac153_MAPQ30_peak_6645 chr9 79572371 79572371 + 3.83555 NA Intergenic Intergenic -51368 NM_015225 158471 Hs.262857 NM_015225 HPRD:12970 PRUNE2 A214N16.3|BMCC1|BNIPXL|C9orf65|KIAA0367|bA214N16.3 prune homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_424 chr1 165509620 165509620 + 3.83555 NA intron (NR_026744, intron 3 of 6) intron (NR_026744, intron 3 of 6) -3858 NM_001005214 440699 Hs.664975 NM_001005214 HPRD:13396 LRRC52 - leucine rich repeat containing 52 protein-coding Atac153_MAPQ30_peak_289 chr1 77522317 77522317 + 3.83555 NA intron (NM_030965, intron 4 of 4) intron (NM_030965, intron 4 of 4) -3511 NR_106978 102466995 NR_106978 MIR7156 hsa-mir-7156 microRNA 7156 ncRNA Atac153_MAPQ30_peak_3154 chr18 74100010 74100010 + 3.83555 NA intron (NM_014643, intron 3 of 7) LTR1B|LTR|ERV1 107136 NM_014643 9658 Hs.436973 NM_014643 ENSG00000101493 ZNF516 HsT287 zinc finger protein 516 protein-coding Atac153_MAPQ30_peak_1222 chr11 64822100 64822100 + 3.83555 NA exon (NM_005468, exon 5 of 18) exon (NM_005468, exon 5 of 18) 3909 NM_005468 10004 Hs.13967 NM_005468 HPRD:07212 NAALADL1 I100|NAALADASEL N-acetylated alpha-linked acidic dipeptidase-like 1 protein-coding Atac153_MAPQ30_peak_6710 chr9 97452765 97452765 + 3.83555 NA Intergenic MLT1H1|LTR|ERVL-MaLR -36186 NM_032823 84909 Hs.434253 NM_032823 HPRD:07476 C9orf3 AOPEP|AP-O|APO|C90RF3|ONPEP chromosome 9 open reading frame 3 protein-coding Atac153_MAPQ30_peak_125 chr1 20753965 20753965 + 3.83555 NA intron (NR_033887, intron 1 of 11) MIR3|SINE|MIR 1322 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA Atac153_MAPQ30_peak_1038 chr11 1854130 1854130 + 3.83555 NA Intergenic Intergenic -1410 NM_001290334 90019 Hs.161031 NM_138567 HPRD:09655 SYT8 - synaptotagmin VIII protein-coding Atac153_MAPQ30_peak_6391 chr8 58171023 58171023 + 3.83555 NA Intergenic Intergenic -2762 NR_038874 286177 Hs.385655 NR_038874 ENSG00000253614 LOC286177 - uncharacterized LOC286177 ncRNA Atac153_MAPQ30_peak_5695 chr6 44669174 44669174 + 3.83555 NA Intergenic Intergenic 265796 NR_039785 100616352 NR_039785 MIR4642 - microRNA 4642 ncRNA Atac153_MAPQ30_peak_5928 chr7 24488700 24488700 + 3.83555 NA Intergenic MLT1C|LTR|ERVL-MaLR -124385 NM_016447 51678 Hs.533355 NM_016447 HPRD:09509 MPP6 PALS2|VAM-1|VAM1|p55T membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) protein-coding Atac153_MAPQ30_peak_2196 chr15 65362119 65362119 + 3.83555 NA Intergenic L3|LINE|CR1 -1731 NM_016563 51285 Hs.27018 NM_016563 HPRD:15217 RASL12 RIS RAS-like, family 12 protein-coding Atac153_MAPQ30_peak_1054 chr11 6245410 6245410 + 3.83555 NA exon (NM_001098794, exon 3 of 12) exon (NM_001098794, exon 3 of 12) 10531 NM_001098794 84067 Hs.501793 NM_032127 HPRD:08002 FAM160A2 C11orf56 family with sequence similarity 160, member A2 protein-coding Atac153_MAPQ30_peak_544 chr1 224706321 224706321 + 3.83555 NA Intergenic Intergenic -84320 NM_001115113 80232 Hs.497873 NM_025160 HPRD:18298 WDR26 CDW2|GID7|MIP2 WD repeat domain 26 protein-coding Atac153_MAPQ30_peak_4589 chr3 14633346 14633346 + 3.83555 NA Intergenic Intergenic -51496 NM_001080423 80852 Hs.517819 NM_001080423 GRIP2 - glutamate receptor interacting protein 2 protein-coding Atac153_MAPQ30_peak_6797 chr9 125868576 125868576 + 3.83555 NA Intergenic Intergenic 5346 NR_030331 693185 NR_030331 miRBase:MI0003613 MIR600 MIRN600|hsa-mir-600 microRNA 600 ncRNA Atac153_MAPQ30_peak_3734 chr2 131599928 131599928 + 3.83555 NA Intergenic Intergenic -74296 NM_015320 50649 Hs.469935 NM_015320 HPRD:05559 ARHGEF4 ASEF|ASEF1|GEF4|STM6 Rho guanine nucleotide exchange factor (GEF) 4 protein-coding Atac153_MAPQ30_peak_6580 chr9 5227111 5227111 + 3.83555 NA Intergenic L1PA11|LINE|L1 -4308 NM_002195 3641 Hs.418506 NM_002195 INSL4 EPIL|PLACENTIN insulin-like 4 (placenta) protein-coding Atac153_MAPQ30_peak_7165 chrX 113510477 113510477 + 3.83555 NA Intergenic L2c|LINE|L2 -308074 NM_001256761 3358 Hs.149037 NM_000868 HPRD:02429 HTR2C 5-HT2C|5-HTR2C|5HTR2C|HTR1C 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled protein-coding Atac153_MAPQ30_peak_6784 chr9 122899754 122899754 + 3.83555 NA Intergenic Intergenic 107574 NR_029604 406939 NR_029604 miRBase:MI0000262 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA Atac153_MAPQ30_peak_6678 chr9 90627935 90627935 + 3.83555 NA Intergenic Intergenic -38240 NM_012119 23552 Hs.522274 NM_012119 HPRD:13010 CDK20 CCRK|CDCH|P42|PNQALRE cyclin-dependent kinase 20 protein-coding Atac153_MAPQ30_peak_2880 chr17 57232560 57232560 + 3.83555 NA promoter-TSS (NM_018304) promoter-TSS (NM_018304) 240 NM_001100595 348235 Hs.463607 NM_182620 HPRD:13306 SKA2 FAM33A spindle and kinetochore associated complex subunit 2 protein-coding Atac153_MAPQ30_peak_528 chr1 214249219 214249219 + 3.83555 NA Intergenic Intergenic 87375 NM_002763 5629 Hs.741808 NM_002763 HPRD:03330 PROX1 - prospero homeobox 1 protein-coding Atac153_MAPQ30_peak_1167 chr11 45253794 45253794 + 3.83555 NA 3' UTR (NM_001256695, exon 8 of 8) 3' UTR (NM_001256695, exon 8 of 8) 54090 NM_020826 57586 Hs.436643 NM_020826 HPRD:12128 SYT13 - synaptotagmin XIII protein-coding Atac153_MAPQ30_peak_1541 chr12 57335783 57335783 + 3.83555 NA Intergenic Intergenic -7594 NM_148897 121214 Hs.380178 NM_148897 HPRD:15235 SDR9C7 RDHS|SDR-O|SDRO short chain dehydrogenase/reductase family 9C, member 7 protein-coding Atac153_MAPQ30_peak_4666 chr3 47399166 47399166 + 3.83555 NA Intergenic Intergenic -23325 NM_015466 25930 Hs.25524 NM_015466 HPRD:05959 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase, non-receptor type 23 protein-coding Atac153_MAPQ30_peak_3311 chr19 42657687 42657687 + 3.83555 NA Intergenic Intergenic -20022 NR_036208 100422980 NR_036208 miRBase:MI0015853 MIR4323 - microRNA 4323 ncRNA Atac153_MAPQ30_peak_873 chr10 100454442 100454442 + 3.83555 NA intron (NM_001166244, intron 4 of 10) intron (NM_001166244, intron 4 of 10) -247738 NM_000195 3257 Hs.404568 NM_000195 HPRD:05403 HPS1 HPS Hermansky-Pudlak syndrome 1 protein-coding Atac153_MAPQ30_peak_1627 chr12 109696651 109696651 + 3.83555 NA intron (NM_001093, intron 45 of 51) intron (NM_001093, intron 45 of 51) 50374 NM_213596 121643 Hs.528316 NM_213596 HPRD:13550 FOXN4 - forkhead box N4 protein-coding Atac153_MAPQ30_peak_4659 chr3 45539623 45539623 + 3.83555 NA intron (NM_015340, intron 14 of 21) intron (NM_015340, intron 14 of 21) 11414 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5245 chr5 6903912 6903912 + 3.83555 NA Intergenic Intergenic -75878 NR_036242 100422999 NR_036242 MIR4278 - microRNA 4278 ncRNA Atac153_MAPQ30_peak_921 chr10 117786791 117786791 + 3.83555 NA Intergenic L2c|LINE|L2 245028 NM_145793 2674 Hs.388347 NM_005264 HPRD:03291 GFRA1 GDNFR|GDNFRA|GFR-ALPHA-1|RET1L|RETL1|TRNR1 GDNF family receptor alpha 1 protein-coding Atac153_MAPQ30_peak_6835 chr9 135602677 135602677 + 3.83555 NA intron (NM_152572, intron 12 of 12) intron (NM_152572, intron 12 of 12) -56889 NM_022779 64794 Hs.660767 NM_022779 HPRD:10860 DDX31 PPP1R25 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 protein-coding Atac153_MAPQ30_peak_2255 chr15 75912576 75912576 + 3.83555 NA intron (NM_001042581, intron 2 of 8) intron (NM_001042581, intron 2 of 8) 5870 NM_001042581 10073 Hs.21577 NM_005701 HPRD:07441 SNUPN KPNBL|RNUT1|Snurportin1 snurportin 1 protein-coding Atac153_MAPQ30_peak_4389 chr22 30057165 30057165 + 3.83555 NA intron (NM_181828, intron 6 of 15) intron (NM_181828, intron 6 of 15) 57620 NM_181832 4771 Hs.187898 NM_000268 HPRD:06980 NF2 ACN|BANF|SCH neurofibromin 2 (merlin) protein-coding Atac153_MAPQ30_peak_969 chr10 127106049 127106049 + 3.83555 NA Intergenic Intergenic -156891 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4635 chr3 38607975 38607975 + 3.83555 NA exon (NM_001099405, exon 21 of 27) exon (NM_001099405, exon 21 of 27) 70212 NM_001145464 9941 Hs.517897 NM_005107 HPRD:06813 EXOG ENDOGL1|ENDOGL2|ENGL|ENGL-a|ENGL-b|ENGLA|ENGLB endo/exonuclease (5'-3'), endonuclease G-like protein-coding Atac153_MAPQ30_peak_7207 chrX 129754058 129754058 + 3.83555 NA Intergenic L2c|LINE|L2 125143 NR_027141 55855 Hs.567120 NM_018472 FAM45B HT011 family with sequence similarity 45, member A pseudogene pseudo Atac153_MAPQ30_peak_2216 chr15 68522805 68522805 + 3.83555 NA promoter-TSS (NM_017882) promoter-TSS (NM_017882) -725 NM_017882 54982 Hs.584921 NM_017882 HPRD:05991 CLN6 CLN4A|HsT18960|nclf ceroid-lipofuscinosis, neuronal 6, late infantile, variant protein-coding Atac153_MAPQ30_peak_4674 chr3 49205236 49205236 + 3.83555 NA Intergenic Intergenic -1451 NM_022903 64925 Hs.211472 NM_022903 HPRD:08576 CCDC71 - coiled-coil domain containing 71 protein-coding Atac153_MAPQ30_peak_2644 chr16 89361246 89361246 + 3.83555 NA intron (NR_045839, intron 5 of 9) intron (NR_045839, intron 5 of 9) -26295 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding Atac153_MAPQ30_peak_3879 chr2 221013362 221013362 + 3.83555 NA Intergenic MIRb|SINE|MIR -242076 NR_036228 100422959 NR_036228 miRBase:MI0015874 MIR4268 - microRNA 4268 ncRNA Atac153_MAPQ30_peak_1527 chr12 53875850 53875850 + 3.83555 NA TTS (NM_001128914) TTS (NM_001128914) 17594 NM_006301 7786 Hs.713539 NM_006301 HPRD:02709 MAP3K12 DLK|MEKK12|MUK|ZPK|ZPKP1 mitogen-activated protein kinase kinase kinase 12 protein-coding Atac153_MAPQ30_peak_7103 chrX 73723433 73723433 + 3.83555 NA intron (NM_006517, intron 1 of 5) intron (NM_006517, intron 1 of 5) 82105 NM_006517 6567 Hs.75317 NM_006517 HPRD:02106 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16, member 2 (thyroid hormone transporter) protein-coding Atac153_MAPQ30_peak_1426 chr12 2685108 2685108 + 3.83555 NA intron (NM_001129832, intron 13 of 47) intron (NM_001129832, intron 13 of 47) 96278 NR_046579 100874235 Hs.667644 NR_046579 CACNA1C-AS2 - CACNA1C antisense RNA 2 ncRNA Atac153_MAPQ30_peak_4101 chr20 40667110 40667110 + 3.83555 NA Intergenic L2c|LINE|L2 -419977 NM_032221 84181 Hs.740645 NM_032221 HPRD:13049 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding Atac153_MAPQ30_peak_3928 chr2 237647129 237647129 + 3.83555 NA Intergenic Intergenic 168749 NM_020311 57007 Hs.471751 NM_020311 HPRD:09882 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding Atac153_MAPQ30_peak_2731 chr17 17628678 17628678 + 3.83555 NA intron (NM_030665, intron 2 of 5) intron (NM_030665, intron 2 of 5) 43891 NM_030665 10743 Hs.655395 NM_030665 HPRD:07406 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding Atac153_MAPQ30_peak_1339 chr11 117074556 117074556 + 3.83555 NA exon (NM_001001522, exon 4 of 5) exon (NM_001001522, exon 4 of 5) -1926 NR_045215 100652768 Hs.732365 NR_045215 LOC100652768 - uncharacterized LOC100652768 ncRNA Atac153_MAPQ30_peak_3111 chr18 54241246 54241246 + 3.83555 NA Intergenic Intergenic 64674 NM_004786 9352 Hs.114412 NM_004786 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin-like 1 protein-coding Atac153_MAPQ30_peak_5639 chr6 32977397 32977397 + 3.83555 NA promoter-TSS (NM_002119).6 promoter-TSS (NM_002119).6 -8 NM_002119 3111 Hs.631991 NM_002119 HPRD:00837 HLA-DOA HLA-DNA|HLA-DZA|HLADZ major histocompatibility complex, class II, DO alpha protein-coding Atac153_MAPQ30_peak_6040 chr7 67237240 67237240 + 3.83555 NA Intergenic Intergenic -248000 NR_120514 102723427 Hs.583491 NR_120514 LOC102723427 - uncharacterized LOC102723427 ncRNA Atac153_MAPQ30_peak_7116 chrX 82184806 82184806 + 3.83555 NA Intergenic MER52-int|LTR|ERV1 -578463 NM_000307 5456 Hs.2229 NM_000307 HPRD:02076 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding Atac153_MAPQ30_peak_2551 chr16 69220562 69220562 + 3.83555 NA promoter-TSS (NM_006750) promoter-TSS (NM_006750) -488 NM_006750 6645 Hs.461117 NM_006750 HPRD:02491 SNTB2 D16S2531E|EST25263|SNT2B2|SNT3|SNTL syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) protein-coding Atac153_MAPQ30_peak_68 chr1 11374857 11374857 + 3.83555 NA Intergenic Intergenic 41602 NM_013319 29914 Hs.522933 NM_013319 HPRD:15487 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding Atac153_MAPQ30_peak_1128 chr11 27924325 27924325 + 3.83555 NA Intergenic Intergenic -154037 NR_030341 693195 NR_030341 miRBase:MI0003623 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA Atac153_MAPQ30_peak_2064 chr14 100748029 100748029 + 3.83555 NA Intergenic Intergenic 4335 NR_106822 102466730 NR_106822 MIR6764 hsa-mir-6764 microRNA 6764 ncRNA Atac153_MAPQ30_peak_5614 chr6 21510781 21510781 + 3.83555 NA intron (NR_103790, intron 1 of 3) intron (NR_103790, intron 1 of 3) 1342 NR_103790 100874531 Hs.112750 NR_103790 LINC00581 - long intergenic non-protein coding RNA 581 ncRNA Atac153_MAPQ30_peak_4646 chr3 40834075 40834075 + 3.83555 NA Intergenic Intergenic 267706 NM_001098414 285268 Hs.19977 NM_198484 ZNF621 - zinc finger protein 621 protein-coding Atac153_MAPQ30_peak_6865 chr9 139403496 139403496 + 3.83555 NA exon (NM_017617, exon 19 of 34) exon (NM_017617, exon 19 of 34) 10582 NR_039820 100616242 NR_039820 MIR4673 - microRNA 4673 ncRNA Atac153_MAPQ30_peak_543 chr1 224415383 224415383 + 3.83555 NA non-coding (NR_110668, exon 3 of 3) non-coding (NR_110668, exon 3 of 3) 8068 NR_110668 101927164 Hs.710128 NR_110668 ENSG00000237101 LOC101927164 - uncharacterized LOC101927164 ncRNA Atac153_MAPQ30_peak_136 chr1 22897345 22897345 + 3.83555 NA intron (NM_001006943, intron 2 of 4) intron (NM_001006943, intron 2 of 4) 7341 NM_001006943 2046 Hs.283613 NM_020526 HPRD:01493 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding Atac153_MAPQ30_peak_5159 chr4 146868068 146868068 + 3.83555 NA Intergenic Intergenic -8461 NM_178835 152485 Hs.633543 NM_178835 HPRD:14095 ZNF827 - zinc finger protein 827 protein-coding Atac153_MAPQ30_peak_5908 chr7 4359505 4359505 + 3.83555 NA Intergenic Intergenic 190188 NM_001079653 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_1992 chr14 76073130 76073130 + 3.83555 NA intron (NM_001195283, intron 1 of 9) AluJb|SINE|Alu 1325 NM_001195283 55640 Hs.509966 NM_017791 HPRD:12654 FLVCR2 C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH feline leukemia virus subgroup C cellular receptor family, member 2 protein-coding Atac153_MAPQ30_peak_1705 chr12 125809451 125809451 + 3.83555 NA Intergenic Intergenic -1711 NM_052907 114795 Hs.524838 NM_052907 TMEM132B - transmembrane protein 132B protein-coding Atac153_MAPQ30_peak_7055 chrX 58288453 58288453 + 3.83555 NA Intergenic GSATX|Satellite|centr -351386 NM_007156 7789 Hs.550094 NM_007156 HPRD:02210 ZXDA ZNF896 zinc finger, X-linked, duplicated A protein-coding Atac153_MAPQ30_peak_5455 chr5 153357594 153357594 + 3.83555 NA Intergenic MIR3|SINE|MIR 60903 NM_018691 10827 Hs.166551 NM_018691 HPRD:12831 FAM114A2 133K02|C5orf3 family with sequence similarity 114, member A2 protein-coding Atac153_MAPQ30_peak_4843 chr3 133230742 133230742 + 3.83555 NA Intergenic ERVL-int|LTR|ERVL -61692 NM_001134422 55573 Hs.518265 NM_017548 HPRD:13627 CDV3 H41 CDV3 homolog (mouse) protein-coding Atac153_MAPQ30_peak_4430 chr22 36698794 36698794 + 3.83555 NA intron (NM_002473, intron 19 of 40) intron (NM_002473, intron 19 of 40) -15841 NR_106877 102465491 NR_106877 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA Atac153_MAPQ30_peak_469 chr1 201335743 201335743 + 3.83555 NA intron (NM_001001432, intron 6 of 13) MER91A|DNA|hAT-Tip100 11085 NM_001276346 7139 Hs.533613 NM_000364 HPRD:01844 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T type 2 (cardiac) protein-coding Atac153_MAPQ30_peak_2901 chr17 64537477 64537477 + 3.83555 NA intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -124505 NR_110822 101928001 Hs.650730 NR_110822 ENSG00000264630 LOC101928001 - uncharacterized LOC101928001 ncRNA Atac153_MAPQ30_peak_2833 chr17 41908731 41908731 + 3.83555 NA intron (NR_003562, intron 4 of 18) intron (NR_003562, intron 4 of 18) 1816 NM_001932 4356 Hs.396566 NM_001932 HPRD:03069 MPP3 DLG3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) protein-coding Atac153_MAPQ30_peak_227 chr1 43219660 43219660 + 3.83555 NA intron (NM_001243246, intron 8 of 13) intron (NM_001243246, intron 8 of 13) 13095 NM_001243246 64175 Hs.720014 NM_022356 HPRD:11227 LEPRE1 GROS1|OI8|P3H1 leucine proline-enriched proteoglycan (leprecan) 1 protein-coding Atac153_MAPQ30_peak_2946 chr17 75732439 75732439 + 3.83555 NA Intergenic Intergenic -7798 NR_104134 100132174 Hs.640110 NR_104134 LOC100132174 - uncharacterized LOC100132174 ncRNA Atac153_MAPQ30_peak_2055 chr14 98544649 98544649 + 3.83555 NA Intergenic Intergenic -100188 NR_015430 388011 Hs.651477 NR_015430 ENSG00000246223 C14orf64 - chromosome 14 open reading frame 64 ncRNA Atac153_MAPQ30_peak_3789 chr2 169965948 169965948 + 3.83555 NA Intergenic Intergenic 28331 NM_001142271 10170 Hs.179608 NM_005771 HPRD:09916 DHRS9 3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4 dehydrogenase/reductase (SDR family) member 9 protein-coding Atac153_MAPQ30_peak_653 chr10 7202890 7202890 + 3.83555 NA 3' UTR (NM_001029880, exon 21 of 21) 3' UTR (NM_001029880, exon 21 of 21) 248413 NM_001018039 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm-like with four mbt domains 2 protein-coding Atac153_MAPQ30_peak_6099 chr7 105296694 105296694 + 3.83555 NA intron (NM_138495, intron 2 of 9) intron (NM_138495, intron 2 of 9) 22915 NM_138495 222255 Hs.745056 NM_020725 HPRD:12508 ATXN7L1 ATXN7L4 ataxin 7-like 1 protein-coding Atac153_MAPQ30_peak_3757 chr2 135581832 135581832 + 3.83555 NA Intergenic Intergenic -14354 NM_138326 130013 Hs.655728 NM_138326 HPRD:12326 ACMSD - aminocarboxymuconate semialdehyde decarboxylase protein-coding Atac153_MAPQ30_peak_4622 chr3 36897914 36897914 + 3.83555 NA exon (NM_014831, exon 12 of 23) exon (NM_014831, exon 12 of 23) 88634 NM_014831 9881 Hs.170999 NM_014831 ENSG00000168016 TRANK1 LBA1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding Atac153_MAPQ30_peak_2439 chr16 23163693 23163693 + 3.83555 NA Intergenic Intergenic -3102 NM_020718 57478 Hs.183817 NM_020718 HPRD:15634 USP31 - ubiquitin specific peptidase 31 protein-coding Atac153_MAPQ30_peak_1049 chr11 5530642 5530642 + 3.83555 NA exon (NM_017481, exon 2 of 2) exon (NM_017481, exon 2 of 2) 511 NM_017481 50613 Hs.189184 NM_017481 HPRD:05684 UBQLN3 TUP-1 ubiquilin 3 protein-coding Atac153_MAPQ30_peak_4533 chr3 4512240 4512240 + 3.83555 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -3274 NM_182760 285362 Hs.350475 NM_182760 HPRD:06399 SUMF1 AAPA3037|FGE sulfatase modifying factor 1 protein-coding Atac153_MAPQ30_peak_3012 chr18 9988116 9988116 + 3.83555 NA Intergenic Intergenic 74161 NM_003574 9218 Hs.165195 NM_003574 HPRD:09299 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa protein-coding Atac153_MAPQ30_peak_1663 chr12 115303481 115303481 + 3.83555 NA Intergenic Intergenic -181512 NM_005996 6926 Hs.744016 NM_005996 HPRD:03373 TBX3 TBX3-ISO|UMS|XHL T-box 3 protein-coding Atac153_MAPQ30_peak_4294 chr21 42791099 42791099 + 3.83555 NA Intergenic L2b|LINE|L2 -1386 NM_001144925 4599 Hs.517307 NM_002462 HPRD:00919 MX1 IFI-78K|IFI78|MX|MxA MX dynamin-like GTPase 1 protein-coding Atac153_MAPQ30_peak_3999 chr20 10631650 10631650 + 3.83555 NA intron (NM_000214, intron 8 of 25) MIR|SINE|MIR -1307 NR_106930 102465525 NR_106930 MIR6870 hsa-mir-6870 microRNA 6870 ncRNA Atac153_MAPQ30_peak_7280 chrX 151452639 151452639 + 3.83555 NA intron (NM_000808, intron 4 of 9) intron (NM_000808, intron 4 of 9) 108132 NR_029521 406897 NR_029521 miRBase:MI0000111 MIR105-1 MIRN105-1 microRNA 105-1 ncRNA Atac153_MAPQ30_peak_5005 chr4 7652711 7652711 + 3.83555 NA intron (NM_020777, intron 4 of 26) intron (NM_020777, intron 4 of 26) -103106 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3595 chr2 85531908 85531908 + 3.83555 NA intron (NM_031283, intron 7 of 11) MER47A|DNA|TcMar-Tigger 23511 NM_001206840 10618 Hs.593382 NM_006464 HPRD:04343 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding Atac153_MAPQ30_peak_6112 chr7 117072900 117072900 + 3.83555 NA Intergenic L1PA11|LINE|L1 -5323 NM_130768 136991 Hs.352412 NM_130768 HPRD:10677 ASZ1 ALP1|ANKL1|C7orf7|CT1.19|GASZ|Orf3 ankyrin repeat, SAM and basic leucine zipper domain containing 1 protein-coding Atac153_MAPQ30_peak_4454 chr22 41737001 41737001 + 3.83555 NA intron (NM_017590, intron 10 of 22) intron (NM_017590, intron 10 of 22) -26336 NM_001145398 7008 Hs.181159 NM_003216 HPRD:01783 TEF - thyrotrophic embryonic factor protein-coding Atac153_MAPQ30_peak_617 chr1 245539094 245539094 + 3.83555 NA intron (NM_018012, intron 3 of 14) intron (NM_018012, intron 3 of 14) 220807 NM_018012 55083 Hs.368096 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding Atac153_MAPQ30_peak_4882 chr3 140420127 140420127 + 3.83555 NA TTS (NM_152616) TTS (NM_152616) 23261 NM_152616 287015 Hs.343487 NM_152616 HPRD:15559 TRIM42 PPP1R40 tripartite motif containing 42 protein-coding Atac153_MAPQ30_peak_5582 chr6 6972081 6972081 + 3.83555 NA Intergenic Intergenic -135749 NM_001168344 6239 Hs.298248 NM_002955 HPRD:03733 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding Atac153_MAPQ30_peak_4347 chr22 23089072 23089072 + 3.83555 NA Intergenic Intergenic -76198 NR_030755 723778 NR_030755 miRBase:MI0003665 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA Atac153_MAPQ30_peak_5899 chr7 3235294 3235294 + 3.83555 NA Intergenic L2b|LINE|L2 -105786 NM_152744 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_602 chr1 235803811 235803811 + 3.83555 NA intron (NM_001098721, intron 1 of 3) intron (NM_001098721, intron 1 of 3) 9482 NM_001098722 2786 Hs.159711 NM_004485 HPRD:11978 GNG4 - guanine nucleotide binding protein (G protein), gamma 4 protein-coding Atac153_MAPQ30_peak_6608 chr9 33442001 33442001 + 3.83555 NA 3' UTR (NM_004925, exon 6 of 6) 3' UTR (NM_004925, exon 6 of 6) 5630 NM_004925 360 Hs.234642 NM_004925 HPRD:08970 AQP3 AQP-3|GIL aquaporin 3 (Gill blood group) protein-coding Atac153_MAPQ30_peak_1927 chr14 56361190 56361190 + 3.83555 NA Intergenic Intergenic -97798 NR_026797 645687 Hs.569345 NR_026796 LINC00520 C14orf34 long intergenic non-protein coding RNA 520 ncRNA Atac153_MAPQ30_peak_2478 chr16 30904430 30904430 + 3.83555 NA promoter-TSS (NR_031576) promoter-TSS (NR_031576) -794 NR_031576 100313837 NR_031576 miRBase:MI0003892 MIR762 hsa-mir-762 microRNA 762 ncRNA Atac153_MAPQ30_peak_2941 chr17 75236948 75236948 + 3.83555 NA Intergenic Intergenic -40544 NM_001113491 10801 Hs.440932 NM_006640 HPRD:10360 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Atac153_MAPQ30_peak_5263 chr5 10977092 10977092 + 3.83555 NA intron (NM_001288717, intron 20 of 20) MER5A|DNA|hAT-Charlie -215705 NM_001291963 1611 Hs.75189 NM_004394 HPRD:02977 DAP - death-associated protein protein-coding Atac153_MAPQ30_peak_4444 chr22 39145695 39145695 + 3.83555 NA intron (NM_001199580, intron 7 of 18) intron (NM_001199580, intron 7 of 18) 5772 NM_001199580 25777 Hs.517622 NM_015374 HPRD:15611 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding Atac153_MAPQ30_peak_4415 chr22 34406321 34406321 + 3.83555 NA Intergenic L2c|LINE|L2 -89905 NM_004737 9215 Hs.474667 NM_004737 HPRD:04665 LARGE MDC1D|MDDGA6|MDDGB6 like-glycosyltransferase protein-coding Atac153_MAPQ30_peak_2594 chr16 82041272 82041272 + 3.83555 NA intron (NM_145168, intron 1 of 2) intron (NM_145168, intron 1 of 2) 3821 NM_145168 93517 Hs.87779 NM_145168 HPRD:17118 SDR42E1 - short chain dehydrogenase/reductase family 42E, member 1 protein-coding Atac153_MAPQ30_peak_1058 chr11 6472967 6472967 + 3.83555 NA intron (NM_001248007, intron 6 of 10) L2c|LINE|L2 -10713 NM_000613 3263 Hs.426485 NM_000613 HPRD:00793 HPX HX hemopexin protein-coding Atac153_MAPQ30_peak_596 chr1 234802489 234802489 + 3.83555 NA Intergenic Intergenic 37432 NR_033927 100302691 Hs.209162 NR_033927 ENSG00000224939 LINC00184 HANC|NCRNA00184 long intergenic non-protein coding RNA 184 ncRNA Atac153_MAPQ30_peak_3254 chr19 23941611 23941611 + 3.83555 NA promoter-TSS (NM_138286) promoter-TSS (NM_138286) 82 NM_138286 148213 Hs.399952 NM_138286 HPRD:08102 ZNF681 - zinc finger protein 681 protein-coding Atac153_MAPQ30_peak_3810 chr2 179398502 179398502 + 3.83555 NA exon (NM_133432, exon 187 of 192) exon (NM_133432, exon 187 of 192) 10584 NR_038271 100506866 Hs.710694 NR_038271 ENSG00000237298 TTN-AS1 - TTN antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2910 chr17 67910478 67910478 + 3.83555 NA Intergenic Intergenic -47370 NR_110874 102723487 Hs.451409 NR_110874 LINC01497 - long intergenic non-protein coding RNA 1497 ncRNA Atac153_MAPQ30_peak_4120 chr20 43615096 43615096 + 3.83555 NA intron (NM_006282, intron 4 of 10) L2a|LINE|L2 19976 NM_006282 6789 Hs.472838 NM_006282 HPRD:05395 STK4 KRS2|MST1|TIIAC|YSK3 serine/threonine kinase 4 protein-coding Atac153_MAPQ30_peak_3265 chr19 30105133 30105133 + 3.83555 NA intron (NM_006627, intron 6 of 6) intron (NM_006627, intron 6 of 6) 7963 NR_027368 10775 Hs.412870 NM_006627 POP4 RPP29 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_7253 chrX 144806788 144806788 + 3.83555 NA Intergenic Intergenic -92559 NM_001144004 84631 Hs.320368 NM_032539 HPRD:06603 SLITRK2 CXorf2|SLITL1 SLIT and NTRK-like family, member 2 protein-coding Atac153_MAPQ30_peak_188 chr1 35028234 35028234 + 3.83555 NA Intergenic Intergenic -192414 NM_005268 2709 Hs.198249 NM_005268 HPRD:06840 GJB5 CX31.1 gap junction protein, beta 5, 31.1kDa protein-coding Atac153_MAPQ30_peak_3127 chr18 59531609 59531609 + 3.83555 NA intron (NM_173557, intron 1 of 1) MER21C|LTR|ERVL 28695 NM_173557 220441 Hs.165062 NM_173557 RNF152 - ring finger protein 152 protein-coding Atac153_MAPQ30_peak_2400 chr16 12346295 12346295 + 3.83555 NA intron (NM_032167, intron 14 of 20) MIRb|SINE|MIR 275693 NM_032167 92017 Hs.458401 NM_032167 HPRD:17437 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding Atac153_MAPQ30_peak_6273 chr8 9667788 9667788 + 3.83555 NA Intergenic HERVK22-int|LTR|ERVK 68606 NR_030327 693182 NR_030327 MIR597 MIRN597|hsa-mir-597 microRNA 597 ncRNA Atac153_MAPQ30_peak_4508 chr22 48821382 48821382 + 3.83555 NA Intergenic Intergenic -63890 NM_001082967 25817 Hs.436854 NM_015381 HPRD:13295 FAM19A5 QLLK5208|TAFA-5|TAFA5|UNQ5208 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 protein-coding Atac153_MAPQ30_peak_238 chr1 45086275 45086275 + 3.83555 NA intron (NM_018150, intron 3 of 14) intron (NM_018150, intron 3 of 14) 54005 NM_024587 79639 Hs.22157 NM_024587 HPRD:07989 TMEM53 NET4 transmembrane protein 53 protein-coding Atac153_MAPQ30_peak_2878 chr17 56424860 56424860 + 3.83555 NA intron (NR_073470, intron 3 of 4) intron (NR_073470, intron 3 of 4) 4739 NM_003168 6827 Hs.439481 NM_003168 HPRD:16026 SUPT4H1 SPT4|SPT4H|SUPT4H suppressor of Ty 4 homolog 1 (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_3247 chr19 18149667 18149667 + 3.83555 NA Intergenic Intergenic 30690 NM_001286826 27106 Hs.515249 NM_015683 HPRD:12492 ARRDC2 CLONE24945 arrestin domain containing 2 protein-coding Atac153_MAPQ30_peak_6870 chr9 140710588 140710588 + 3.83555 NA intron (NM_024757, intron 23 of 26) intron (NM_024757, intron 23 of 26) -22283 NR_030333 693187 NR_030333 miRBase:MI0003615 MIR602 MIRN602|hsa-mir-602 microRNA 602 ncRNA Atac153_MAPQ30_peak_5960 chr7 33850386 33850386 + 3.83555 NA Intergenic Intergenic -94137 NM_133468 168667 Hs.660998 NM_133468 HPRD:16368 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding Atac153_MAPQ30_peak_5068 chr4 44049402 44049402 + 3.83555 NA Intergenic LTR16B1|LTR|ERVL 401422 NM_198353 386617 Hs.479644 NM_198353 HPRD:13771 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding Atac153_MAPQ30_peak_4193 chr20 58756157 58756157 + 3.83555 NA intron (NR_046099, intron 3 of 4) intron (NR_046099, intron 3 of 4) 42609 NR_046099 284757 Hs.737441 NM_001004305 HPRD:17342 MIR646HG - MIR646 host gene (non-protein coding) ncRNA Atac153_MAPQ30_peak_3336 chr19 50085016 50085016 + 3.83555 NA intron (NM_000951, intron 1 of 6) intron (NM_000951, intron 1 of 6) 429 NM_000951 5639 Hs.35101 NM_000951 HPRD:09189 PRRG2 PRGP2 proline rich Gla (G-carboxyglutamic acid) 2 protein-coding Atac153_MAPQ30_peak_2137 chr15 40881864 40881864 + 3.83555 NA Intergenic Intergenic -4583 NM_170589 57082 Hs.181855 NM_144508 HPRD:10634 CASC5 AF15Q14|CT29|D40|KNL1|PPP1R55|Spc7|hKNL-1|hSpc105 cancer susceptibility candidate 5 protein-coding Atac153_MAPQ30_peak_3433 chr2 16797960 16797960 + 3.83555 NA intron (NM_030797, intron 2 of 11) intron (NM_030797, intron 2 of 11) 49174 NM_030797 81553 Hs.467769 NM_030797 HPRD:07729 FAM49A - family with sequence similarity 49, member A protein-coding Atac153_MAPQ30_peak_2414 chr16 14710566 14710566 + 3.83555 NA intron (NM_001134477, intron 6 of 23) AluJr|SINE|Alu 13562 NM_002582 5073 Hs.253197 NM_002582 HPRD:07250 PARN DAN poly(A)-specific ribonuclease protein-coding Atac153_MAPQ30_peak_2863 chr17 49438017 49438017 + 3.83555 NA Intergenic LTR67B|LTR|ERVL 23941 NR_122104 440446 Hs.626751 NR_122104 HPRD:13466 LOC440446 - uncharacterized LOC440446 ncRNA Atac153_MAPQ30_peak_1852 chr13 100179324 100179324 + 3.83555 NA intron (NM_004800, intron 3 of 16) L2a|LINE|L2 25696 NM_004800 9375 Hs.607896 NM_004800 HPRD:09198 TM9SF2 P76 transmembrane 9 superfamily member 2 protein-coding Atac153_MAPQ30_peak_3574 chr2 71708827 71708827 + 3.83555 NA intron (NM_003494, intron 2 of 54) (TCCA)n|Simple_repeat|Simple_repeat 14995 NM_001130987 8291 Hs.252180 NM_003494 HPRD:04307 DYSF FER1L1|LGMD2B|MMD1 dysferlin protein-coding Atac153_MAPQ30_peak_5101 chr4 74598148 74598148 + 3.83555 NA Intergenic Intergenic -8075 NM_000584 3576 Hs.624 NM_000584 HPRD:00909 CXCL8 GCP-1|GCP1|IL8|LECT|LUCT|LYNAP|MDNCF|MONAP|NAF|NAP-1|NAP1 chemokine (C-X-C motif) ligand 8 protein-coding Atac153_MAPQ30_peak_5527 chr5 177542029 177542029 + 3.83555 NA intron (NM_015111, intron 1 of 4) intron (NM_015111, intron 1 of 4) 1473 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding Atac153_MAPQ30_peak_2801 chr17 32768730 32768730 + 3.83555 NA Intergenic (TGGA)n|Simple_repeat|Simple_repeat -78478 NM_002981 6346 Hs.72918 NM_002981 HPRD:01654 CCL1 I-309|P500|SCYA1|SISe|TCA3 chemokine (C-C motif) ligand 1 protein-coding Atac153_MAPQ30_peak_5316 chr5 62023486 62023486 + 3.83555 NA Intergenic Intergenic 148924 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding Atac153_MAPQ30_peak_6537 chr8 142094197 142094197 + 3.83555 NA Intergenic Intergenic -44523 NM_014957 22898 Hs.18166 NM_014957 HPRD:11114 DENND3 - DENN/MADD domain containing 3 protein-coding Atac153_MAPQ30_peak_189 chr1 35038213 35038213 + 3.83555 NA Intergenic Intergenic -182435 NM_005268 2709 Hs.198249 NM_005268 HPRD:06840 GJB5 CX31.1 gap junction protein, beta 5, 31.1kDa protein-coding Atac153_MAPQ30_peak_6530 chr8 141090436 141090436 + 3.83555 NA intron (NM_031466, intron 17 of 22) MSTB2|LTR|ERVL-MaLR -375137 NM_001282534 51305 Hs.493037 NM_001282534 HPRD:16167 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium channel, subfamily K, member 9 protein-coding Atac153_MAPQ30_peak_4880 chr3 139821432 139821432 + 3.83555 NA intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 167405 NM_022131 64084 Hs.158529 NM_022131 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding Atac153_MAPQ30_peak_6612 chr9 34585129 34585129 + 3.83555 NA intron (NM_001207011, intron 1 of 9) L2c|LINE|L2 4606 NM_001842 1271 Hs.129966 NM_001842 HPRD:00348 CNTFR - ciliary neurotrophic factor receptor protein-coding Atac153_MAPQ30_peak_5559 chr6 2987410 2987410 + 3.83555 NA promoter-TSS (NR_026855) promoter-TSS (NR_026855) -791 NR_026855 401232 Hs.720158 NM_207495 HPRD:16819 LINC01011 DKFZP686I15217 long intergenic non-protein coding RNA 1011 ncRNA Atac153_MAPQ30_peak_7127 chrX 93993995 93993995 + 3.83555 NA Intergenic L1PA10|LINE|L1 1064983 NM_001171111 286499 Hs.110069 NM_173698 HPRD:06562 FAM133A CT115 family with sequence similarity 133, member A protein-coding Atac153_MAPQ30_peak_6791 chr9 124064708 124064708 + 3.83555 NA intron (NM_001127662, intron 2 of 16) MIR|SINE|MIR 2629 NM_000177 2934 Hs.522373 NM_000177 HPRD:00674 GSN ADF|AGEL gelsolin protein-coding Atac153_MAPQ30_peak_4218 chr20 62418530 62418530 + 3.83555 NA intron (NM_025224, intron 2 of 4) Tigger3c|DNA|TcMar-Tigger 18326 NM_025224 140685 Hs.585028 NM_025224 HPRD:16567 ZBTB46 BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8 zinc finger and BTB domain containing 46 protein-coding Atac153_MAPQ30_peak_1765 chr13 23547386 23547386 + 3.83555 NA Intergenic L1MC4|LINE|L1 -75066 NR_033774 646201 Hs.729338 NR_033774 BASP1P1 - brain abundant, membrane attached signal protein 1 pseudogene 1 pseudo Atac153_MAPQ30_peak_4102 chr20 40690896 40690896 + 3.83555 NA Intergenic Intergenic -443763 NM_032221 84181 Hs.740645 NM_032221 HPRD:13049 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding Atac153_MAPQ30_peak_423 chr1 165405743 165405743 + 3.83555 NA TTS (NR_033824) TTS (NR_033824) 8849 NM_001256570 6258 Hs.26550 NM_006917 HPRD:01579 RXRG NR2B3|RXRC retinoid X receptor, gamma protein-coding Atac153_MAPQ30_peak_2069 chr14 101280175 101280175 + 3.83555 NA promoter-TSS (NR_039729) promoter-TSS (NR_039729) -653 NR_039729 100616495 NR_039729 miRBase:MI0016870 MIR2392 - microRNA 2392 ncRNA Atac153_MAPQ30_peak_746 chr10 47130661 47130661 + 3.83555 NA intron (NR_033957, intron 1 of 3) LTR33|LTR|ERVL 3175 NR_003277 728643 Hs.711067 NR_003277 ENSG00000213412 HNRNPA1P33 - heterogeneous nuclear ribonucleoprotein A1 pseudogene 33 pseudo Atac153_MAPQ30_peak_6469 chr8 123794547 123794547 + 3.83555 NA intron (NM_014943, intron 1 of 3) CpG-25975 646 NM_014943 22882 Hs.377090 NM_014943 HPRD:16458 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding Atac153_MAPQ30_peak_705 chr10 31136138 31136138 + 3.83555 NA intron (NM_182755, intron 7 of 7) MER52D|LTR|ERV1 152308 NM_001143769 220929 Hs.660642 NM_182755 HPRD:11247 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding Atac153_MAPQ30_peak_992 chr10 130577059 130577059 + 3.83555 NA Intergenic Intergenic 492845 NR_120619 101927381 Hs.523342 NR_120619 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA Atac153_MAPQ30_peak_119 chr1 20071144 20071144 + 3.83555 NA intron (NM_181719, intron 10 of 15) L2b|LINE|L2 55266 NM_181719 255104 Hs.656313 NM_181719 HPRD:14140 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding Atac153_MAPQ30_peak_1438 chr12 3745874 3745874 + 3.83555 NA intron (NM_001144958, intron 14 of 19) intron (NM_001144958, intron 14 of 19) 116492 NM_001144958 84766 Hs.504534 NM_032680 HPRD:10079 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding Atac153_MAPQ30_peak_1403 chr11 132224192 132224192 + 3.83555 NA Intergenic Intergenic 69996 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript (non-protein coding) ncRNA Atac153_MAPQ30_peak_3751 chr2 133297314 133297314 + 3.83555 NA intron (NM_001508, intron 1 of 1) MLT1G3|LTR|ERVL-MaLR 123167 NM_001508 2863 Hs.432395 NM_001508 HPRD:04198 GPR39 - G protein-coupled receptor 39 protein-coding Atac153_MAPQ30_peak_4817 chr3 126460530 126460530 + 3.83555 NA intron (NM_032343, intron 4 of 7) MER5A|DNA|hAT-Charlie 37467 NM_032343 84303 Hs.518119 NM_032343 HPRD:13047 CHCHD6 CHCM1|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding Atac153_MAPQ30_peak_6716 chr9 98258576 98258576 + 3.83555 NA intron (NM_001083604, intron 2 of 23) intron (NM_001083604, intron 2 of 23) 10905 NM_001083607 5727 Hs.494538 NM_000264 HPRD:03200 PTCH1 BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11 patched 1 protein-coding Atac153_MAPQ30_peak_5496 chr5 171242455 171242455 + 3.83555 NA Intergenic MLT1L|LTR|ERVL-MaLR 29579 NM_001289970 644994 Hs.591740 NM_001289970 SMIM23 C5orf50 small integral membrane protein 23 protein-coding Atac153_MAPQ30_peak_5169 chr4 154765173 154765173 + 3.83555 NA Intergenic Intergenic -54945 NM_003013 6423 Hs.481022 NM_003013 HPRD:16041 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled-related protein 2 protein-coding Atac153_MAPQ30_peak_4202 chr20 60141357 60141357 + 3.83555 NA intron (NM_001252338, intron 1 of 14) intron (NM_001252338, intron 1 of 14) -33460 NM_001252339 1002 Hs.473231 NM_001794 HPRD:04304 CDH4 CAD4|R-CAD|RCAD cadherin 4, type 1, R-cadherin (retinal) protein-coding Atac153_MAPQ30_peak_3724 chr2 129515523 129515523 + 3.83555 NA Intergenic L1MB7|LINE|L1 -106651 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA Atac153_MAPQ30_peak_2997 chr18 7166098 7166098 + 3.83555 NA Intergenic MLT1C|LTR|ERVL-MaLR -48285 NM_005559 284217 Hs.270364 NM_005559 HPRD:01033 LAMA1 LAMA|S-LAM-alpha laminin, alpha 1 protein-coding Atac153_MAPQ30_peak_3631 chr2 97554373 97554373 + 3.83555 NA intron (NM_001172667, intron 2 of 4) intron (NM_001172667, intron 2 of 4) 6526 NM_001172667 51252 Hs.107922 NM_016490 HPRD:14235 FAM178B - family with sequence similarity 178, member B protein-coding Atac153_MAPQ30_peak_6740 chr9 110520798 110520798 + 3.83555 NA Intergenic Intergenic -268751 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel-like factor 4 (gut) protein-coding Atac153_MAPQ30_peak_6310 chr8 21609111 21609111 + 3.83555 NA intron (NM_001165039, intron 1 of 6) intron (NM_001165039, intron 1 of 6) 37235 NM_001495 2675 Hs.441202 NM_001495 HPRD:11801 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding Atac153_MAPQ30_peak_1096 chr11 13920494 13920494 + 3.83555 NA Intergenic Intergenic -63690 NM_006108 10418 Hs.643864 NM_006108 SPON1 VSGP/F-spondin|f-spondin spondin 1, extracellular matrix protein protein-coding Atac153_MAPQ30_peak_2988 chr18 4798670 4798670 + 3.83555 NA Intergenic L2a|LINE|L2 -343404 NM_004746 9229 Hs.594640 NM_004746 HPRD:09260 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1|hGKAP discs, large (Drosophila) homolog-associated protein 1 protein-coding Atac153_MAPQ30_peak_6578 chr9 4425805 4425805 + 3.83555 NA Intergenic Intergenic -64622 NM_004170 6505 Hs.444915 NM_004170 HPRD:00597 SLC1A1 EAAC1|EAAT3|SCZD18 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 protein-coding Atac153_MAPQ30_peak_3623 chr2 95960705 95960705 + 3.83555 NA Intergenic Intergenic -2367 NM_013434 30818 Hs.437376 NM_013434 HPRD:05232 KCNIP3 CSEN|DREAM|KCHIP3 Kv channel interacting protein 3, calsenilin protein-coding Atac153_MAPQ30_peak_4665 chr3 47049462 47049462 + 3.83555 NA intron (NM_015175, intron 49 of 53) intron (NM_015175, intron 49 of 53) -3570 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo Atac153_MAPQ30_peak_5950 chr7 30718942 30718942 + 3.83555 NA intron (NM_001202475, intron 3 of 12) MIR|SINE|MIR 3199 NM_001202482 1395 Hs.546246 NM_001883 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding Atac153_MAPQ30_peak_7158 chrX 109638315 109638315 + 3.83555 NA intron (NM_001171689, intron 2 of 7) intron (NM_001171689, intron 2 of 7) -23970 NM_020769 57529 Hs.201071 NM_020769 HPRD:06600 RGAG1 MAR9|MART9 retrotransposon gag domain containing 1 protein-coding Atac153_MAPQ30_peak_2294 chr15 86495022 86495022 + 3.83555 NA Intergenic Intergenic -156833 NM_022480 64410 Hs.498371 NM_022480 HPRD:07780 KLHL25 ENC-2|ENC2 kelch-like family member 25 protein-coding Atac153_MAPQ30_peak_384 chr1 154540220 154540220 + 3.83555 NA promoter-TSS (NM_000748) promoter-TSS (NM_000748) -37 NM_000748 1141 Hs.2306 NM_000748 HPRD:00335 CHRNB2 EFNL3|nAChRB2 cholinergic receptor, nicotinic, beta 2 (neuronal) protein-coding Atac153_MAPQ30_peak_621 chr1 246546671 246546671 + 3.83555 NA intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) 34043 NM_022743 64754 Hs.567571 NM_022743 HPRD:12297 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding Atac153_MAPQ30_peak_4933 chr3 184788698 184788698 + 3.83555 NA Intergenic Intergenic 82104 NM_001025266 285382 Hs.380048 NM_001025266 HPRD:18774 C3orf70 - chromosome 3 open reading frame 70 protein-coding Atac153_MAPQ30_peak_440 chr1 177316223 177316223 + 3.83555 NA Intergenic Intergenic 175590 NM_021165 57795 Hs.495918 NM_021165 HPRD:13891 BRINP2 DBCCR1L2|FAM5B bone morphogenetic protein/retinoic acid inducible neural-specific 2 protein-coding Atac153_MAPQ30_peak_993 chr10 130618985 130618985 + 3.83555 NA Intergenic MLT1C|LTR|ERVL-MaLR 534771 NR_120619 101927381 Hs.523342 NR_120619 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA Atac153_MAPQ30_peak_574 chr1 230020578 230020578 + 3.83555 NA Intergenic Intergenic -172958 NM_001291866 2590 Hs.743964 NM_004481 HPRD:03782 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding Atac153_MAPQ30_peak_5211 chr5 421970 421970 + 3.83555 NA intron (NM_020731, intron 5 of 11) intron (NM_020731, intron 5 of 11) 21288 NM_138464 116349 Hs.446702 NM_138464 ENSG00000221990 C5orf55 - chromosome 5 open reading frame 55 protein-coding Atac153_MAPQ30_peak_7110 chrX 79132557 79132557 + 3.83555 NA Intergenic MLT1A0-int|LTR|ERVL-MaLR -137698 NM_001109878 50945 Hs.374253 NM_016954 HPRD:02253 TBX22 ABERS|CLPA|CPX|TBXX|dJ795G23.1 T-box 22 protein-coding Atac153_MAPQ30_peak_2502 chr16 49751736 49751736 + 3.83555 NA intron (NM_015069, intron 3 of 7) intron (NM_015069, intron 3 of 7) 104913 NM_015069 23090 Hs.530930 NM_015069 HPRD:05189 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104 zinc finger protein 423 protein-coding Atac153_MAPQ30_peak_5753 chr6 109139529 109139529 + 3.83555 NA Intergenic Intergenic -30090 NM_001286609 84071 Hs.645481 NM_032131 HPRD:09809 ARMC2 bA787I22.1 armadillo repeat containing 2 protein-coding Atac153_MAPQ30_peak_5981 chr7 44407461 44407461 + 3.83555 NA Intergenic L1M2a|LINE|L1 -42231 NM_172078 816 Hs.351887 NM_001220 HPRD:12127 CAMK2B CAM2|CAMK2|CAMKB calcium/calmodulin-dependent protein kinase II beta protein-coding Atac153_MAPQ30_peak_3707 chr2 126952856 126952856 + 3.83555 NA Intergenic Intergenic -460655 NM_001256584 2995 Hs.59138 NM_002101 HPRD:00193 GYPC CD236|CD236R|GE|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding Atac153_MAPQ30_peak_6945 chrX 20758191 20758191 + 3.83555 NA Intergenic L2a|LINE|L2 -473441 NM_004586 6197 Hs.445387 NM_004586 HPRD:02092 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase, 90kDa, polypeptide 3 protein-coding Atac153_MAPQ30_peak_4723 chr3 57986732 57986732 + 3.83555 NA Intergenic Intergenic -7395 NM_001457 2317 Hs.476448 NM_001457 HPRD:04543 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B, beta protein-coding Atac153_MAPQ30_peak_2398 chr16 11730213 11730213 + 3.83555 NA Intergenic LTR9|LTR|ERV1 -32076 NM_003498 8303 Hs.618526 NM_003498 HPRD:04327 SNN - stannin protein-coding Atac153_MAPQ30_peak_5146 chr4 129161951 129161951 + 3.83555 NA Intergenic Intergenic 48033 NM_006320 10424 Hs.507910 NM_006320 HPRD:09665 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding Atac153_MAPQ30_peak_2268 chr15 78341585 78341585 + 3.83555 NA intron (NM_144572, intron 2 of 12) L2a|LINE|L2 28409 NM_144572 23102 Hs.567426 NM_015079 HPRD:08310 TBC1D2B - TBC1 domain family, member 2B protein-coding Atac153_MAPQ30_peak_6859 chr9 138632124 138632124 + 3.83555 NA intron (NM_020822, intron 2 of 30) intron (NM_020822, intron 2 of 30) 38093 NM_020822 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|bA100C15.2 potassium channel, subfamily T, member 1 protein-coding Atac153_MAPQ30_peak_2897 chr17 63492909 63492909 + 3.83555 NA Intergenic Intergenic 64831 NM_004655 8313 Hs.156527 NM_004655 HPRD:04935 AXIN2 AXIL|ODCRCS axin 2 protein-coding Atac153_MAPQ30_peak_1297 chr11 94892397 94892397 + 3.83555 NA TTS (NR_110303) TTS (NR_110303) 8694 NR_110303 101929295 Hs.735838 NR_110303 ENSG00000245552 LOC101929295 - uncharacterized LOC101929295 ncRNA Atac153_MAPQ30_peak_2787 chr17 27397097 27397097 + 3.83555 NA Intergenic Intergenic 5530 NM_004740 9220 Hs.462590 NM_004740 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding Atac153_MAPQ30_peak_678 chr10 16838559 16838559 + 3.83555 NA intron (NM_152724, intron 1 of 7) intron (NM_152724, intron 1 of 7) 20894 NM_152724 6251 Hs.524161 NM_012425 HPRD:01551 RSU1 RSP-1 Ras suppressor protein 1 protein-coding Atac153_MAPQ30_peak_5279 chr5 16605378 16605378 + 3.83555 NA intron (NM_001034850, intron 1 of 8) intron (NM_001034850, intron 1 of 8) -10657 NR_109946 101929524 Hs.734029 NR_109946 LOC101929524 - uncharacterized LOC101929524 ncRNA Atac153_MAPQ30_peak_6930 chrX 18346688 18346688 + 3.83555 NA intron (NR_033717, intron 3 of 15) AluJr|SINE|Alu 26156 NM_006089 10389 Hs.495774 NM_006089 HPRD:02195 SCML2 - sex comb on midleg-like 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_1720 chr12 129240057 129240057 + 3.83555 NA Intergenic MLT1H|LTR|ERVL-MaLR 68484 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 PHT1|PTR4 solute carrier family 15 (oligopeptide transporter), member 4 protein-coding Atac153_MAPQ30_peak_229 chr1 43893765 43893765 + 3.83555 NA exon (NM_015284, exon 26 of 71) exon (NM_015284, exon 26 of 71) -20445 NR_106793 102465440 NR_106793 MIR6735 hsa-mir-6735 microRNA 6735 ncRNA Atac153_MAPQ30_peak_1930 chr14 57141202 57141202 + 3.83555 NA Intergenic Intergenic 94691 NM_017799 54916 Hs.497253 NM_017799 HPRD:12624 TMEM260 C14orf101 transmembrane protein 260 protein-coding Atac153_MAPQ30_peak_3882 chr2 222885490 222885490 + 3.83555 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -277376 NM_153038 151278 Hs.350729 NM_153038 HPRD:08132 CCDC140 - coiled-coil domain containing 140 protein-coding Atac153_MAPQ30_peak_4071 chr20 33566494 33566494 + 3.83555 NA intron (NM_020884, intron 5 of 44) MER45A|DNA|hAT-Tip100 -11685 NR_030223 574501 NR_030223 MIR499A MIR499|MIRN499|hsa-mir-499a microRNA 499a ncRNA Atac153_MAPQ30_peak_5868 chr6 169565926 169565926 + 3.83555 NA Intergenic Intergenic 88283 NM_003247 7058 Hs.371147 NM_003247 HPRD:01766 THBS2 TSP2 thrombospondin 2 protein-coding Atac153_MAPQ30_peak_7000 chrX 40776698 40776698 + 3.83555 NA Intergenic L1MC5|LINE|L1 -84249 NR_027761 100132831 Hs.729923 NR_027761 LOC100132831 - A20-binding inhibitor of NF-kappaB activation 2 pseudogene pseudo Atac153_MAPQ30_peak_4850 chr3 134338024 134338024 + 3.83555 NA exon (NM_178554, exon 8 of 11) exon (NM_178554, exon 8 of 11) 31840 NM_178554 339855 Hs.146730 NM_178554 KY - kyphoscoliosis peptidase protein-coding Atac153_MAPQ30_peak_78 chr1 14285622 14285622 + 3.83555 NA Intergenic Intergenic 209746 NM_001007257 7799 Hs.371823 NM_012231 HPRD:03120 PRDM2 HUMHOXY1|KMT8|MTB-ZF|RIZ|RIZ1|RIZ2 PR domain containing 2, with ZNF domain protein-coding Atac153_MAPQ30_peak_3719 chr2 128624633 128624633 + 3.83555 NA intron (NM_031445, intron 6 of 7) intron (NM_031445, intron 6 of 7) -8904 NM_004805 5433 Hs.715348 NM_004805 HPRD:16191 POLR2D HSRBP4|HSRPB4|RBP4|RPB16 polymerase (RNA) II (DNA directed) polypeptide D protein-coding Atac153_MAPQ30_peak_354 chr1 119392248 119392248 + 3.83555 NA Intergenic Intergenic 139931 NM_152380 6913 Hs.146196 NM_152380 HPRD:16035 TBX15 TBX14 T-box 15 protein-coding Atac153_MAPQ30_peak_5347 chr5 79473508 79473508 + 3.83555 NA intron (NM_178276, intron 3 of 12) intron (NM_178276, intron 3 of 12) 78390 NM_001174072 256987 Hs.288232 NM_178276 HPRD:12828 SERINC5 C5orf12|TPO1 serine incorporator 5 protein-coding Atac153_MAPQ30_peak_2692 chr17 7848480 7848480 + 3.83555 NA intron (NM_053051, intron 12 of 18) intron (NM_053051, intron 12 of 18) 13038 NM_001037144 116840 Hs.348012 NM_053051 HPRD:13991 CNTROB LIP8 centrobin, centrosomal BRCA2 interacting protein protein-coding Atac153_MAPQ30_peak_2278 chr15 80237528 80237528 + 3.83555 NA Intergenic Intergenic -21432 NR_037652 400410 Hs.729127 NM_001100879 ENSG00000180953 ST20 HCCS-1 suppressor of tumorigenicity 20 protein-coding Atac153_MAPQ30_peak_4428 chr22 36661385 36661385 + 3.83555 NA exon (NM_003661, exon 6 of 6) exon (NM_003661, exon 6 of 6) 12268 NM_003661 8542 Hs.114309 NM_003661 HPRD:04774 APOL1 APO-L|APOL|APOL-I|FSGS4 apolipoprotein L, 1 protein-coding Atac153_MAPQ30_peak_3291 chr19 36353725 36353725 + 3.83555 NA intron (NM_199180, intron 12 of 14) intron (NM_199180, intron 12 of 14) -5676 NM_001024807 333 Hs.74565 NM_005166 HPRD:00102 APLP1 APLP amyloid beta (A4) precursor-like protein 1 protein-coding Atac153_MAPQ30_peak_1079 chr11 10600560 10600560 + 3.83555 NA intron (NM_001100163, intron 20 of 20) intron (NM_001100163, intron 20 of 20) -10195 NM_006691 10894 Hs.655332 NM_006691 LYVE1 CRSBP-1|HAR|LYVE-1|XLKD1 lymphatic vessel endothelial hyaluronan receptor 1 protein-coding Atac153_MAPQ30_peak_4797 chr3 118598456 118598456 + 3.83555 NA Intergenic Intergenic -63467 NR_046230 100506765 Hs.660823 NR_046230 ENSG00000239877 IGSF11-AS1 - IGSF11 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5244 chr5 6830090 6830090 + 3.83555 NA Intergenic Intergenic -2056 NR_036242 100422999 NR_036242 MIR4278 - microRNA 4278 ncRNA Atac153_MAPQ30_peak_3335 chr19 49755802 49755802 + 3.83555 NA Intergenic Intergenic 56323 NR_036209 100422979 NR_036209 MIR4324 - microRNA 4324 ncRNA Atac153_MAPQ30_peak_2894 chr17 62363057 62363057 + 3.83555 NA Intergenic Intergenic -22374 NM_018469 55852 Hs.175414 NM_018469 HPRD:13716 TEX2 HT008|TMEM96 testis expressed 2 protein-coding Atac153_MAPQ30_peak_6900 chrX 9094884 9094884 + 3.83555 NA Intergenic Intergenic -92716 NM_205849 171483 Hs.733351 NM_173696 HPRD:06566 FAM9B TEX39B family with sequence similarity 9, member B protein-coding Atac153_MAPQ30_peak_3457 chr2 23901481 23901481 + 3.83555 NA intron (NM_052920, intron 5 of 13) intron (NM_052920, intron 5 of 13) 248503 NR_125717 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family, AAA domain containing 2B protein-coding Atac153_MAPQ30_peak_5376 chr5 112850078 112850078 + 3.83555 NA intron (NM_022828, intron 1 of 29) intron (NM_022828, intron 1 of 29) 687 NM_022828 64848 Hs.231942 NM_022828 HPRD:11690 YTHDC2 CAHL YTH domain containing 2 protein-coding Atac153_MAPQ30_peak_5840 chr6 164380794 164380794 + 3.83555 NA Intergenic Intergenic 545119 NM_001301085 9444 Hs.510324 NM_006775 HPRD:06691 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing, RNA binding protein-coding Atac153_MAPQ30_peak_3163 chr18 76281326 76281326 + 3.83555 NA Intergenic Intergenic -458949 NM_171999 27164 Hs.700557 NM_171999 SALL3 ZNF796 spalt-like transcription factor 3 protein-coding Atac153_MAPQ30_peak_1517 chr12 52400004 52400004 + 3.83555 NA promoter-TSS (NM_181711) promoter-TSS (NM_181711) -725 NM_181711 160622 Hs.407202 NM_181711 HPRD:17077 GRASP TAMALIN GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein protein-coding Atac153_MAPQ30_peak_6613 chr9 34996957 34996957 + 3.83555 NA intron (NM_001135004, intron 4 of 4) intron (NM_001135004, intron 4 of 4) 6690 NM_001135005 25822 Hs.237506 NM_012266 ENSG00000137094 DNAJB5 Hsc40 DnaJ (Hsp40) homolog, subfamily B, member 5 protein-coding Atac153_MAPQ30_peak_6231 chr7 158135353 158135353 + 3.83555 NA intron (NM_130842, intron 1 of 21) MIR|SINE|MIR 190152 NR_030325 693180 NR_030325 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA Atac153_MAPQ30_peak_654 chr10 7237715 7237715 + 3.83555 NA intron (NM_001018039, intron 15 of 20) intron (NM_001018039, intron 15 of 20) 213588 NM_001018039 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm-like with four mbt domains 2 protein-coding Atac153_MAPQ30_peak_1504 chr12 48133681 48133681 + 3.83555 NA intron (NM_001098531, intron 23 of 27) intron (NM_001098531, intron 23 of 27) -14326 NM_001172440 8909 Hs.997 NM_006025 HPRD:12110 ENDOU P11|PP11|PRSS26 endonuclease, polyU-specific protein-coding Atac153_MAPQ30_peak_7036 chrX 53219271 53219271 + 3.83555 NA Intergenic Intergenic 5399 NR_106955 102465539 NR_106955 MIR6895 hsa-mir-6895 microRNA 6895 ncRNA Atac153_MAPQ30_peak_4234 chr21 16511731 16511731 + 3.83555 NA Intergenic Intergenic -74605 NM_003489 8204 Hs.155017 NM_003489 HPRD:03927 NRIP1 RIP140 nuclear receptor interacting protein 1 protein-coding Atac153_MAPQ30_peak_2407 chr16 12675410 12675410 + 3.83555 NA Intergenic MIRb|SINE|MIR -138768 NR_039869 100616195 NR_039869 miRBase:MI0017353 MIR4718 - microRNA 4718 ncRNA Atac153_MAPQ30_peak_1145 chr11 35802792 35802792 + 3.83555 NA intron (NM_017583, intron 4 of 4) intron (NM_017583, intron 4 of 4) 118439 NM_017583 54765 Hs.192103 NM_017583 TRIM44 DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding Atac153_MAPQ30_peak_13 chr1 2571847 2571847 + 3.83555 NA TTS (NM_001242672) TTS (NM_001242672) -7366 NM_033467 79258 Hs.591453 NM_033467 HPRD:07024 MMEL1 MMEL2|NEP2|NEPII|NL1|NL2|SEP membrane metallo-endopeptidase-like 1 protein-coding Atac153_MAPQ30_peak_950 chr10 125319920 125319920 + 3.83555 NA Intergenic L2a|LINE|L2 -105951 NM_153442 2849 Hs.12751 NM_153442 GPR26 - G protein-coupled receptor 26 protein-coding Atac153_MAPQ30_peak_4978 chr4 3634583 3634583 + 3.83555 NA Intergenic MLT1C|LTR|ERVL-MaLR 44999 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LOC100133461 - uncharacterized LOC100133461 ncRNA Atac153_MAPQ30_peak_7157 chrX 109369032 109369032 + 3.83555 NA intron (NM_032227, intron 4 of 6) intron (NM_032227, intron 4 of 6) 43686 NR_039774 100616491 NR_039774 MIR3978 - microRNA 3978 ncRNA Atac153_MAPQ30_peak_3013 chr18 10339896 10339896 + 3.83555 NA Intergenic Intergenic 74471 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA Atac153_MAPQ30_peak_4083 chr20 35256442 35256442 + 3.83555 NA intron (NM_032214, intron 5 of 7) intron (NM_032214, intron 5 of 7) 18177 NM_175077 84174 Hs.713578 NM_032214 HPRD:05955 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src-like-adaptor 2 protein-coding Atac153_MAPQ30_peak_1399 chr11 131787031 131787031 + 3.83555 NA intron (NM_001144059, intron 1 of 5) L2a|LINE|L2 6319 NM_016522 50863 Hs.504352 NM_016522 HPRD:06398 NTM HNT|IGLON2|NTRI neurotrimin protein-coding Atac153_MAPQ30_peak_1561 chr12 67835455 67835455 + 3.83555 NA Intergenic Intergenic -78407 NR_103861 100507175 Hs.505986 NR_103861 ENSG00000203585 LOC100507175 - uncharacterized LOC100507175 ncRNA Atac153_MAPQ30_peak_4590 chr3 14892979 14892979 + 3.83555 NA intron (NM_152536, intron 1 of 19) intron (NM_152536, intron 1 of 19) 32510 NM_152536 152273 Hs.412406 NM_152536 HPRD:13322 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding Atac153_MAPQ30_peak_6029 chr7 62476179 62476179 + 3.83555 NA Intergenic Intergenic 288255 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo Atac153_MAPQ30_peak_5021 chr4 9927619 9927619 + 3.83555 NA intron (NM_001001290, intron 7 of 12) intron (NM_001001290, intron 7 of 12) 95495 NM_020041 56606 Hs.656895 NM_020041 HPRD:05848 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 (facilitated glucose transporter), member 9 protein-coding Atac153_MAPQ30_peak_4455 chr22 41752434 41752434 + 3.83555 NA exon (NM_017590, exon 21 of 23) exon (NM_017590, exon 21 of 23) -10903 NM_001145398 7008 Hs.181159 NM_003216 HPRD:01783 TEF - thyrotrophic embryonic factor protein-coding Atac153_MAPQ30_peak_6668 chr9 86782775 86782775 + 3.83555 NA Intergenic MER1B|DNA|hAT-Charlie 104417 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA Atac153_MAPQ30_peak_1582 chr12 94191832 94191832 + 3.83555 NA intron (NM_003805, intron 2 of 2) intron (NM_003805, intron 2 of 2) -60233 NR_110092 101928731 Hs.659971 NR_110092 LOC101928731 - uncharacterized LOC101928731 ncRNA Atac153_MAPQ30_peak_6441 chr8 101987370 101987370 + 3.83555 NA Intergenic AluJr|SINE|Alu -21747 NM_003406 7534 Hs.492407 NM_003406 HPRD:03183 YWHAZ 14-3-3-zeta|HEL-S-3|HEL4|KCIP-1|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta protein-coding Atac153_MAPQ30_peak_5028 chr4 10595410 10595410 + 3.83555 NA intron (NM_052964, intron 3 of 18) intron (NM_052964, intron 3 of 18) 90976 NM_052964 116449 Hs.678910 NM_052964 CLNK MIST cytokine-dependent hematopoietic cell linker protein-coding Atac153_MAPQ30_peak_6220 chr7 156759077 156759077 + 3.83555 NA exon (NM_138400, exon 8 of 11) exon (NM_138400, exon 8 of 11) 16660 NM_138400 64434 Hs.15825 NM_138400 HPRD:18485 NOM1 C7orf3|PPP1R113|SGD1 nucleolar protein with MIF4G domain 1 protein-coding Atac153_MAPQ30_peak_2441 chr16 23576384 23576384 + 3.83555 NA intron (NM_019116, intron 5 of 6) intron (NM_019116, intron 5 of 6) 7522 NM_019116 56061 Hs.3459 NM_019116 HPRD:15606 UBFD1 UBPH ubiquitin family domain containing 1 protein-coding Atac153_MAPQ30_peak_6907 chrX 9902163 9902163 + 3.83555 NA intron (NM_001649, intron 6 of 9) intron (NM_001649, intron 6 of 9) -33235 NM_001195081 100288814 Hs.722001 NM_001195081 LOC100288814 - uncharacterized LOC100288814 protein-coding Atac153_MAPQ30_peak_612 chr1 243495664 243495664 + 3.83555 NA intron (NM_006642, intron 10 of 17) L2b|LINE|L2 -13814 NR_039824 100616343 NR_039824 MIR4677 - microRNA 4677 ncRNA Atac153_MAPQ30_peak_5264 chr5 10978115 10978115 + 3.83555 NA intron (NM_001288717, intron 20 of 20) intron (NM_001288717, intron 20 of 20) -216728 NM_001291963 1611 Hs.75189 NM_004394 HPRD:02977 DAP - death-associated protein protein-coding Atac153_MAPQ30_peak_2140 chr15 41820717 41820717 + 3.83555 NA intron (NM_015540, intron 9 of 24) intron (NM_015540, intron 9 of 24) -14632 NM_002344 4058 Hs.434481 NM_002344 HPRD:01052 LTK TYK1 leukocyte receptor tyrosine kinase protein-coding Atac153_MAPQ30_peak_432 chr1 172390996 172390996 + 3.83555 NA intron (NM_139240, intron 1 of 6) L1M1|LINE|L1 1168 NM_139240 92346 Hs.517991 NM_139240 HPRD:14291 C1orf105 - chromosome 1 open reading frame 105 protein-coding Atac153_MAPQ30_peak_853 chr10 88703481 88703481 + 3.83555 NA exon (NM_024756, exon 6 of 7) exon (NM_024756, exon 6 of 7) 13944 NM_024756 79812 Hs.524479 NM_024756 HPRD:10601 MMRN2 EMILIN-3|EMILIN3|ENDOGLYX-1 multimerin 2 protein-coding Atac153_MAPQ30_peak_2947 chr17 76246200 76246200 + 3.83555 NA Intergenic MIRb|SINE|MIR 18809 NM_001204212 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding Atac153_MAPQ30_peak_595 chr1 234452542 234452542 + 3.83555 NA intron (NM_001300845, intron 4 of 6) intron (NM_001300845, intron 4 of 6) 10329 NR_039818 100616380 NR_039818 MIR4671 - microRNA 4671 ncRNA Atac153_MAPQ30_peak_6257 chr8 3000395 3000395 + 3.83555 NA intron (NM_033225, intron 40 of 69) intron (NM_033225, intron 40 of 69) -414404 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000249694 LOC101927815 - uncharacterized LOC101927815 ncRNA Atac153_MAPQ30_peak_3296 chr19 38686705 38686705 + 3.83555 NA intron (NM_015073, intron 18 of 21) intron (NM_015073, intron 18 of 21) 28185 NM_001289978 8193 Hs.631576 NM_004647 HPRD:03393 DPF1 BAF45b|NEUD4|neuro-d4 D4, zinc and double PHD fingers family 1 protein-coding Atac153_MAPQ30_peak_2099 chr15 25308554 25308554 + 3.83555 NA TTS (NR_003322) TTS (NR_003322) 1075 NR_003320 100033417 NR_003320 ENSG00000207191 SNORD116-5 HBII-85-5 small nucleolar RNA, C/D box 116-5 snoRNA Atac153_MAPQ30_peak_6311 chr8 21986679 21986679 + 3.83555 NA exon (NM_005144, exon 2 of 19) exon (NM_005144, exon 2 of 19) 1886 NM_018411 55806 Hs.272367 NM_005144 HPRD:03808 HR ALUNC|AU|HSA277165|HYPT4|MUHH|MUHH1 hair growth associated protein-coding Atac153_MAPQ30_peak_3605 chr2 89301353 89301353 + 3.83555 NA Intergenic MER70-int|LTR|ERVL 189469 NR_039635 100616399 NR_039635 miRBase:MI0016776 MIR4436A - microRNA 4436a ncRNA Atac153_MAPQ30_peak_6875 chr9 140999403 140999403 + 3.83555 NA intron (NM_000718, intron 37 of 45) intron (NM_000718, intron 37 of 45) -45162 NR_027156 643224 Hs.551805 NR_027156 TUBBP5 - tubulin, beta pseudogene 5 pseudo Atac153_MAPQ30_peak_3937 chr2 238849499 238849499 + 3.83555 NA Intergenic LTR47A|LTR|ERVL -26088 NM_080678 140739 Hs.471785 NM_080678 HPRD:14812 UBE2F NCE2 ubiquitin-conjugating enzyme E2F (putative) protein-coding Atac153_MAPQ30_peak_1894 chr14 23571382 23571382 + 3.83555 NA Intergenic Intergenic -6559 NM_001164815 22985 Hs.124490 NM_014977 HPRD:05191 ACIN1 ACINUS|ACN|fSAP152 apoptotic chromatin condensation inducer 1 protein-coding Atac153_MAPQ30_peak_479 chr1 202184626 202184626 + 3.83555 NA intron (NM_001017404, intron 1 of 15) intron (NM_001017404, intron 1 of 15) 1343 NM_001017404 59352 Hs.497402 NM_021636 HPRD:05974 LGR6 GPCR|VTS20631 leucine-rich repeat containing G protein-coupled receptor 6 protein-coding Atac153_MAPQ30_peak_2809 chr17 35284265 35284265 + 3.83555 NA Intergenic Intergenic -10507 NM_005568 3975 Hs.443727 NM_005568 HPRD:09067 LHX1 LIM-1|LIM1 LIM homeobox 1 protein-coding Atac153_MAPQ30_peak_6421 chr8 95927846 95927846 + 3.83555 NA Intergenic L1PA17|LINE|L1 -20364 NM_057749 9134 Hs.521693 NM_004702 HPRD:04801 CCNE2 CYCE2 cyclin E2 protein-coding Atac153_MAPQ30_peak_6684 chr9 92093817 92093817 + 3.83555 NA intron (NM_006378, intron 1 of 17) MLT1G|LTR|ERVL-MaLR 794 NM_006378 10507 Hs.494406 NM_006378 HPRD:03520 SEMA4D C9orf164|CD100|M-sema-G|SEMAJ|coll-4 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D protein-coding Atac153_MAPQ30_peak_3630 chr2 97527412 97527412 + 3.83555 NA intron (NM_017789, intron 13 of 14) intron (NM_017789, intron 13 of 14) -3656 NM_016466 51239 Hs.709507 NM_016466 HPRD:14614 ANKRD39 - ankyrin repeat domain 39 protein-coding Atac153_MAPQ30_peak_4698 chr3 52233301 52233301 + 3.83555 NA exon (NM_000688, exon 3 of 12) exon (NM_000688, exon 3 of 12) 1202 NM_199166 211 Hs.476308 NM_000688 HPRD:00505 ALAS1 ALAS|ALAS3|ALASH|MIG4 aminolevulinate, delta-, synthase 1 protein-coding Atac153_MAPQ30_peak_4143 chr20 47864205 47864205 + 3.83555 NA exon (NM_021035, exon 14 of 14) exon (NM_021035, exon 14 of 14) 28373 NM_017895 55661 Hs.65234 NM_017895 HPRD:10859 DDX27 DRS1|Drs1p|PP3241|RHLP|dJ686N3.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 protein-coding Atac153_MAPQ30_peak_4943 chr3 193316134 193316134 + 3.83555 NA intron (NM_130834, intron 1 of 29) L2|LINE|L2 5201 NM_015560 4976 Hs.594504 NM_015560 HPRD:05596 OPA1 MGM1|NPG|NTG|largeG optic atrophy 1 (autosomal dominant) protein-coding Atac153_MAPQ30_peak_4786 chr3 111395639 111395639 + 3.83555 NA non-coding (NR_046733, exon 2 of 2) non-coding (NR_046733, exon 2 of 2) 641 NR_046733 100874115 Hs.626740 NR_046733 PLCXD2-AS1 - PLCXD2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5847 chr6 166630874 166630874 + 3.83555 NA Intergenic L1MC2|LINE|L1 -48717 NM_003181 6862 Hs.389457 NM_003181 HPRD:03236 T SAVA|TFT T, brachyury homolog (mouse) protein-coding Atac153_MAPQ30_peak_5816 chr6 153464929 153464929 + 3.83555 NA Intergenic LTR78B|LTR|ERV1 -12540 NM_012419 26575 Hs.166313 NM_012419 HPRD:06223 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G-protein signaling 17 protein-coding Atac153_MAPQ30_peak_5599 chr6 14831873 14831873 + 3.83555 NA Intergenic Intergenic -414333 NM_004973 3720 Hs.269059 NM_004973 HPRD:03355 JARID2 JMJ jumonji, AT rich interactive domain 2 protein-coding Atac153_MAPQ30_peak_1461 chr12 13404673 13404673 + 3.83555 NA Intergenic MLT2D|LTR|ERVL 55071 NM_001423 2012 Hs.719042 NM_001423 HPRD:11892 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding Atac153_MAPQ30_peak_1807 chr13 46495991 46495991 + 3.83555 NA Intergenic Intergenic -70145 NM_198849 283514 Hs.368483 NM_198849 HPRD:14145 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding Atac153_MAPQ30_peak_259 chr1 52032159 52032159 + 3.83555 NA Intergenic Intergenic -47164 NM_001981 2060 Hs.83722 NM_001981 HPRD:08968 EPS15 AF-1P|AF1P|MLLT5 epidermal growth factor receptor pathway substrate 15 protein-coding Atac153_MAPQ30_peak_7277 chrX 150184248 150184248 + 3.83555 NA Intergenic MIR3|SINE|MIR 32390 NM_001301228 3149 Hs.19114 NM_005342 HPRD:02181 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding Atac153_MAPQ30_peak_5630 chr6 30562941 30562941 + 3.83555 NA Intergenic Intergenic 10832 NR_030615 100126314 NR_030615 MIR877 MIRN877|hsa-mir-877|miRNA877 microRNA 877 ncRNA Atac153_MAPQ30_peak_4764 chr3 73671246 73671246 + 3.83555 NA intron (NM_015009, intron 1 of 9) intron (NM_015009, intron 1 of 9) -1473 NR_046681 101927249 Hs.733334 NR_046681 PDZRN3-AS1 - PDZRN3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3023 chr18 13531720 13531720 + 3.83555 NA intron (NM_181482, intron 4 of 5) LTR85c|LTR|Gypsy? 71774 NR_049822 100847080 NR_049822 MIR5190 - microRNA 5190 ncRNA Atac153_MAPQ30_peak_813 chr10 79569613 79569613 + 3.83555 NA intron (NM_004747, intron 23 of 31) MIR3|SINE|MIR 116735 NM_004747 9231 Hs.652690 NM_004747 HPRD:04972 DLG5 LP-DLG|P-DLG5|PDLG discs, large homolog 5 (Drosophila) protein-coding Atac153_MAPQ30_peak_422 chr1 165087746 165087746 + 3.83555 NA Intergenic MIR|SINE|MIR 237732 NM_001174069 4009 Hs.667312 NM_177398 HPRD:02623 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1, alpha protein-coding Atac153_MAPQ30_peak_3079 chr18 44291164 44291164 + 3.83555 NA intron (NM_013305, intron 1 of 6) MER91A|DNA|hAT-Tip100 45875 NM_013305 29906 Hs.465025 NM_013305 HPRD:06199 ST8SIA5 SIAT8E|ST8SiaV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 protein-coding Atac153_MAPQ30_peak_1831 chr13 74153951 74153951 + 3.83555 NA intron (NR_047009, intron 1 of 2) intron (NR_047009, intron 1 of 2) 15570 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA Atac153_MAPQ30_peak_7178 chrX 118151461 118151461 + 3.83555 NA intron (NR_110311, intron 10 of 10) intron (NR_110311, intron 10 of 10) 41166 NM_001289109 79836 Hs.144266 NM_024778 HPRD:06708 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding Atac153_MAPQ30_peak_886 chr10 104440659 104440659 + 3.83555 NA intron (NM_004311, intron 5 of 5) intron (NM_004311, intron 5 of 5) 33531 NM_004311 403 Hs.182215 NM_004311 HPRD:05260 ARL3 ARFL3 ADP-ribosylation factor-like 3 protein-coding Atac153_MAPQ30_peak_4471 chr22 44761419 44761419 + 3.83555 NA Intergenic Intergenic -52688 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 KIAA1644 - KIAA1644 protein-coding Atac153_MAPQ30_peak_4587 chr3 14533232 14533232 + 3.83555 NA 3' UTR (NM_001080423, exon 24 of 24) 3' UTR (NM_001080423, exon 24 of 24) 48618 NM_001080423 80852 Hs.517819 NM_001080423 GRIP2 - glutamate receptor interacting protein 2 protein-coding Atac153_MAPQ30_peak_3620 chr2 95684103 95684103 + 3.83555 NA Intergenic Intergenic -7297 NM_022439 4118 Hs.80395 NM_002371 HPRD:01789 MAL - mal, T-cell differentiation protein protein-coding Atac153_MAPQ30_peak_4461 chr22 42983912 42983912 + 3.83555 NA intron (NR_103820, intron 7 of 8) intron (NR_103820, intron 7 of 8) -5895 NR_002184 91695 Hs.534041 NR_002184 ENSG00000182841 RRP7B dJ222E13.2 ribosomal RNA processing 7 homolog B (S. cerevisiae) pseudo Atac153_MAPQ30_peak_1368 chr11 124622691 124622691 + 3.83555 NA promoter-TSS (NM_014312) promoter-TSS (NM_014312) -582 NM_014312 23584 Hs.112377 NM_014312 HPRD:08390 VSIG2 2210413P10Rik|CTH|CTXL V-set and immunoglobulin domain containing 2 protein-coding Atac153_MAPQ30_peak_295 chr1 85439060 85439060 + 3.83555 NA intron (NM_153259, intron 1 of 13) AluJr|SINE|Alu 23736 NM_153259 255231 Hs.591446 NM_153259 HPRD:09584 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding Atac153_MAPQ30_peak_6776 chr9 119726507 119726507 + 3.83555 NA intron (NM_014010, intron 9 of 21) (TG)n|Simple_repeat|Simple_repeat 216973 NR_003708 100124538 Hs.693445 NR_003708 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA Atac153_MAPQ30_peak_2094 chr15 20546064 20546064 + 3.83555 NA Intergenic (CAGC)n|Simple_repeat|Simple_repeat 58067 NR_038836 646096 Hs.448789 NR_038836 CHEK2P2 - checkpoint kinase 2 pseudogene 2 pseudo Atac153_MAPQ30_peak_5113 chr4 82964152 82964152 + 3.83555 NA Intergenic Intergenic 330997 NM_031369 3184 Hs.480073 NM_002138 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) protein-coding Atac153_MAPQ30_peak_47 chr1 7620994 7620994 + 3.83555 NA intron (NM_015215, intron 6 of 22) intron (NM_015215, intron 6 of 22) -210335 NM_004781 9341 Hs.66708 NM_004781 HPRD:04711 VAMP3 CEB vesicle-associated membrane protein 3 protein-coding Atac153_MAPQ30_peak_145 chr1 24741741 24741741 + 3.83555 NA promoter-TSS (NM_020448) promoter-TSS (NM_020448) -154 NM_001199012 90529 Hs.403187 NM_178122 HPRD:14273 STPG1 C1orf201|MAPO2 sperm-tail PG-rich repeat containing 1 protein-coding Atac153_MAPQ30_peak_6786 chr9 122953858 122953858 + 3.83555 NA Intergenic Intergenic 53470 NR_029604 406939 NR_029604 miRBase:MI0000262 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA Atac153_MAPQ30_peak_4788 chr3 112530581 112530581 + 3.83555 NA Intergenic Intergenic 34216 NM_001199215 344807 Hs.531814 NM_001008784 HPRD:16691 CD200R1L CD200R2|CD200RLa CD200 receptor 1-like protein-coding Atac153_MAPQ30_peak_4201 chr20 59524317 59524317 + 3.83555 NA Intergenic Intergenic -129803 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LOC100506470 - uncharacterized LOC100506470 ncRNA Atac153_MAPQ30_peak_3371 chr2 1727722 1727722 + 3.83555 NA intron (NM_012293, intron 1 of 22) intron (NM_012293, intron 1 of 22) 20597 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_7254 chrX 144929306 144929306 + 3.83555 NA Intergenic MIR3|SINE|MIR 20378 NM_004709 9142 Hs.106688 NM_004709 HPRD:06477 TMEM257 CXorf1 transmembrane protein 257 protein-coding Atac153_MAPQ30_peak_217 chr1 41076667 41076667 + 3.83555 NA Intergenic MER83|LTR|ERV1 54657 NM_014747 9783 Hs.654808 NM_014747 HPRD:17976 RIMS3 NIM3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding Atac153_MAPQ30_peak_4751 chr3 69281675 69281675 + 3.83555 NA intron (NM_015123, intron 7 of 22) intron (NM_015123, intron 7 of 22) -109929 NM_198271 56203 Hs.350621 NM_198271 HPRD:13993 LMOD3 - leiomodin 3 (fetal) protein-coding Atac153_MAPQ30_peak_2198 chr15 65614288 65614288 + 3.83555 NA Intergenic Intergenic -35270 NM_017851 54956 Hs.30634 NM_017851 HPRD:07919 PARP16 ARTD15|C15orf30|pART15 poly (ADP-ribose) polymerase family, member 16 protein-coding Atac153_MAPQ30_peak_2208 chr15 67312272 67312272 + 3.83555 NA Intergenic MIRb|SINE|MIR -45923 NM_005902 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Atac153_MAPQ30_peak_573 chr1 230006057 230006057 + 3.83555 NA Intergenic Intergenic -187479 NM_001291866 2590 Hs.743964 NM_004481 HPRD:03782 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding Atac153_MAPQ30_peak_3896 chr2 230084086 230084086 + 3.83555 NA intron (NM_001100818, intron 1 of 2) THE1C|LTR|ERVL-MaLR 51971 NM_017933 55022 Hs.745038 NM_017933 HPRD:07944 PID1 NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding Atac153_MAPQ30_peak_7219 chrX 133143495 133143495 + 3.83555 NA Intergenic (TAGA)n|Simple_repeat|Simple_repeat -23822 NM_001164618 2719 Hs.644108 NM_004484 HPRD:02074 GPC3 DGSX|GTR2-2|MXR7|OCI-5|SDYS|SGB|SGBS|SGBS1 glypican 3 protein-coding Atac153_MAPQ30_peak_5168 chr4 154678628 154678628 + 3.83555 NA intron (NM_173662, intron 1 of 8) intron (NM_173662, intron 1 of 8) 2759 NM_173662 285533 Hs.388364 NM_173662 HPRD:15262 RNF175 - ring finger protein 175 protein-coding Atac153_MAPQ30_peak_5042 chr4 22530965 22530965 + 3.83555 NA Intergenic L2|LINE|L2 -13288 NM_145290 166647 Hs.99195 NM_145290 HPRD:11011 GPR125 PGR21|TEM5L G protein-coupled receptor 125 protein-coding Atac153_MAPQ30_peak_6459 chr8 117640829 117640829 + 3.83555 NA Intergenic Intergenic 127233 NM_003756 8667 Hs.492599 NM_003756 EIF3H EIF3S3|eIF3-gamma|eIF3-p40 eukaryotic translation initiation factor 3, subunit H protein-coding Atac153_MAPQ30_peak_4387 chr22 29697842 29697842 + 3.83555 NA Intergenic Intergenic -5143 NM_152236 10634 Hs.322852 NM_006478 HPRD:03676 GAS2L1 GAR22 growth arrest-specific 2 like 1 protein-coding Atac153_MAPQ30_peak_3054 chr18 35033184 35033184 + 3.83555 NA intron (NM_001025087, intron 2 of 12) intron (NM_001025087, intron 2 of 12) 112816 NM_001025089 56853 Hs.435976 NM_020180 HPRD:12534 CELF4 BRUNOL-4|BRUNOL4 CUGBP, Elav-like family member 4 protein-coding Atac153_MAPQ30_peak_6675 chr9 89274711 89274711 + 3.83555 NA Intergenic MLT1I|LTR|ERVL-MaLR 287393 NM_002048 2619 Hs.65029 NM_002048 HPRD:00747 GAS1 - growth arrest-specific 1 protein-coding Atac153_MAPQ30_peak_3575 chr2 71921251 71921251 + 3.83555 NA Intergenic MamRep605|Unknown|Unknown 227419 NM_001130987 8291 Hs.252180 NM_003494 HPRD:04307 DYSF FER1L1|LGMD2B|MMD1 dysferlin protein-coding Atac153_MAPQ30_peak_6867 chr9 140030516 140030516 + 3.83555 NA Intergenic L2a|LINE|L2 -3093 NM_001185090 2902 Hs.558334 NM_000832 HPRD:15926 GRIN1 GluN1|MRD8|NMDA1|NMDAR1|NR1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 protein-coding Atac153_MAPQ30_peak_4313 chr21 45292688 45292688 + 3.83555 NA intron (NM_020132, intron 1 of 9) intron (NM_020132, intron 1 of 9) 7572 NM_020132 56894 Hs.248785 NM_020132 HPRD:10637 AGPAT3 LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding Atac153_MAPQ30_peak_6023 chr7 55616607 55616607 + 3.83555 NA intron (NM_030796, intron 1 of 4) intron (NM_030796, intron 1 of 4) 3859 NM_001284282 81552 Hs.488307 NM_030796 HPRD:08526 VOPP1 ECOP|GASP vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding Atac153_MAPQ30_peak_205 chr1 37891935 37891935 + 3.83555 NA Intergenic Intergenic 48109 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA Atac153_MAPQ30_peak_3844 chr2 206775108 206775108 + 3.83555 NA Intergenic Intergenic 175798 NM_017759 54891 Hs.445036 NM_017759 HPRD:07894 INO80D - INO80 complex subunit D protein-coding Atac153_MAPQ30_peak_2116 chr15 29284599 29284599 + 3.83555 NA intron (NM_001130414, intron 1 of 12) intron (NM_001130414, intron 1 of 12) 70759 NM_001130414 321 Hs.618112 NM_005503 HPRD:04090 APBA2 D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L amyloid beta (A4) precursor protein-binding, family A, member 2 protein-coding Atac153_MAPQ30_peak_6084 chr7 98568211 98568211 + 3.83555 NA intron (NM_001244580, intron 51 of 71) intron (NM_001244580, intron 51 of 71) -42577 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA Atac153_MAPQ30_peak_4988 chr4 5862191 5862191 + 3.83555 NA intron (NM_001014809, intron 3 of 13) intron (NM_001014809, intron 3 of 13) 27349 NM_001288662 1400 Hs.135270 NM_001313 HPRD:03913 CRMP1 CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3 collapsin response mediator protein 1 protein-coding Atac153_MAPQ30_peak_1972 chr14 70131823 70131823 + 3.83555 NA intron (NM_014734, intron 2 of 5) intron (NM_014734, intron 2 of 5) 53513 NM_014734 9766 Hs.440025 NM_014734 HPRD:10010 KIAA0247 - KIAA0247 protein-coding Atac153_MAPQ30_peak_4550 chr3 10319264 10319264 + 3.83555 NA intron (NM_014760, intron 5 of 7) intron (NM_014760, intron 5 of 7) -3372 NR_024145 100126793 Hs.672979 NR_004431 ENSG00000240288 GHRLOS GHRL-AS1|GHRLAS|NCRNA00068 ghrelin opposite strand/antisense RNA ncRNA Atac153_MAPQ30_peak_2661 chr17 2952620 2952620 + 3.83555 NA Intergenic Intergenic 14281 NM_014566 8386 Hs.553508 NM_014566 HPRD:17684 OR1D5 C17orf2|OR17-2|OR17-30|OR17-31 olfactory receptor, family 1, subfamily D, member 5 protein-coding Atac153_MAPQ30_peak_3366 chr2 71303 71303 + 3.83555 NA Intergenic MLT1H|LTR|ERVL-MaLR -24715 NM_001077710 642273 Hs.8379 NM_001077710 FAM110C - family with sequence similarity 110, member C protein-coding Atac153_MAPQ30_peak_4067 chr20 31850683 31850683 + 3.83555 NA Intergenic Intergenic -20258 NM_033197 92747 Hs.65551 NM_033197 HPRD:12740 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B, member 1 protein-coding Atac153_MAPQ30_peak_5221 chr5 2609402 2609402 + 3.83555 NA Intergenic Intergenic 142367 NM_001134222 153572 Hs.282089 NM_033267 HPRD:09368 IRX2 IRXA2 iroquois homeobox 2 protein-coding Atac153_MAPQ30_peak_590 chr1 233334891 233334891 + 3.83555 NA intron (NM_014801, intron 14 of 33) intron (NM_014801, intron 14 of 33) 96568 NM_014801 80003 Hs.370605 NM_014801 HPRD:15108 PCNXL2 - pecanex-like 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_2896 chr17 63215061 63215061 + 3.83555 NA intron (NM_001081955, intron 17 of 18) L2a|LINE|L2 81605 NM_001081955 8787 Hs.664380 NM_003835 HPRD:04962 RGS9 PERRS|RGS9L regulator of G-protein signaling 9 protein-coding Atac153_MAPQ30_peak_3435 chr2 18234076 18234076 + 3.83555 NA Intergenic Intergenic 174152 NM_002252 3790 Hs.414489 NM_002252 HPRD:04865 KCNS3 KV9.3 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 protein-coding Atac153_MAPQ30_peak_1032 chr10 135013648 135013648 + 3.83555 NA intron (NM_152643, intron 15 of 29) intron (NM_152643, intron 15 of 29) -30130 NM_003577 8433 Hs.458406 NM_003577 HPRD:11964 UTF1 - undifferentiated embryonic cell transcription factor 1 protein-coding Atac153_MAPQ30_peak_2843 chr17 44068114 44068114 + 3.83555 NA intron (NM_001123066, intron 8 of 14).2 intron (NM_001123066, intron 8 of 14).2 -8502 NM_001007532 246744 Hs.661831 NM_001007532 HPRD:06142 STH MAPTIT saitohin protein-coding Atac153_MAPQ30_peak_1644 chr12 111929271 111929271 + 3.83555 NA intron (NM_002973, intron 14 of 24) L1M1|LINE|L1 56605 NM_001291424 10019 Hs.506784 NM_005475 HPRD:05480 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding Atac153_MAPQ30_peak_6369 chr8 47825093 47825093 + 3.83555 NA Intergenic Intergenic 72585 NR_027013 497634 Hs.406982 NR_027012 ENSG00000253314 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA Atac153_MAPQ30_peak_2691 chr17 7751574 7751574 + 3.83555 NA exon (NM_001080424, exon 11 of 22) exon (NM_001080424, exon 11 of 22) -6810 NM_203411 92162 Hs.389669 NM_203411 HPRD:17438 TMEM88 - transmembrane protein 88 protein-coding Atac153_MAPQ30_peak_6360 chr8 41718905 41718905 + 3.83555 NA intron (NM_001142446, intron 1 of 42) MER103C|DNA|hAT-Charlie 35375 NM_001142446 286 Hs.654438 NM_000037 HPRD:01693 ANK1 ANK|SPH1|SPH2 ankyrin 1, erythrocytic protein-coding Atac153_MAPQ30_peak_1492 chr12 33569782 33569782 + 3.83555 NA intron (NM_198992, intron 2 of 6) L2|LINE|L2 22972 NM_198992 341359 Hs.118703 NM_198992 SYT10 - synaptotagmin X protein-coding Atac153_MAPQ30_peak_6447 chr8 103776703 103776703 + 3.83555 NA Intergenic Intergenic 99694 NM_148174 51582 Hs.459106 NM_015878 HPRD:07443 AZIN1 OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding Atac153_MAPQ30_peak_634 chr10 1449908 1449908 + 3.83555 NA intron (NM_018702, intron 1 of 9) intron (NM_018702, intron 1 of 9) -118917 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168|bA466B20.1 ADARB2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6717 chr9 98283846 98283846 + 3.83555 NA Intergenic Intergenic -4599 NM_001083603 5727 Hs.494538 NM_000264 HPRD:03200 PTCH1 BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11 patched 1 protein-coding Atac153_MAPQ30_peak_3205 chr19 6425024 6425024 + 3.83555 NA promoter-TSS (NM_003685) promoter-TSS (NM_003685) -202 NM_003685 8570 Hs.727344 NM_003685 HPRD:10350 KHSRP FBP2|FUBP2|KSRP KH-type splicing regulatory protein protein-coding Atac153_MAPQ30_peak_4492 chr22 47039372 47039372 + 3.83555 NA intron (NM_015124, intron 2 of 17) L1MC4|LINE|L1 16714 NM_015124 23151 Hs.475150 NM_015124 HPRD:11107 GRAMD4 DIP|dA59H18.1|dJ439F8.1 GRAM domain containing 4 protein-coding Atac153_MAPQ30_peak_3711 chr2 128155995 128155995 + 3.83555 NA Intergenic Intergenic -20001 NM_000312 5624 Hs.224698 NM_000312 HPRD:01466 PROC APC|PC|PROC1|THPH3|THPH4 protein C (inactivator of coagulation factors Va and VIIIa) protein-coding Atac153_MAPQ30_peak_6899 chrX 8798424 8798424 + 3.83555 NA Intergenic Intergenic -29000 NM_174951 171482 Hs.382062 NM_174951 HPRD:06506 FAM9A TEX39A family with sequence similarity 9, member A protein-coding Atac153_MAPQ30_peak_6034 chr7 66873701 66873701 + 3.83555 NA Intergenic MSTA|LTR|ERVL-MaLR 72738 NR_108104 101929736 Hs.634050 NR_108104 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA Atac153_MAPQ30_peak_4484 chr22 46652381 46652381 + 3.83555 NA 3' UTR (NM_006071, exon 1 of 1) 3' UTR (NM_006071, exon 1 of 1) -6188 NM_207327 150383 Hs.103110 NM_207327 CDPF1 C22orf40 cysteine-rich, DPF motif domain containing 1 protein-coding Atac153_MAPQ30_peak_3865 chr2 217620138 217620138 + 3.83555 NA Intergenic MLT1J2|LTR|ERVL-MaLR -59866 NM_000599 3488 Hs.607212 NM_000599 HPRD:00901 IGFBP5 IBP5 insulin-like growth factor binding protein 5 protein-coding Atac153_MAPQ30_peak_3694 chr2 121515577 121515577 + 3.83555 NA Intergenic Intergenic -39290 NM_005270 2736 Hs.111867 NM_005270 HPRD:01312 GLI2 HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding Atac153_MAPQ30_peak_2653 chr17 1920364 1920364 + 3.83555 NA intron (NM_178568, intron 1 of 1) intron (NM_178568, intron 1 of 1) 7814 NM_178568 146760 Hs.22917 NM_178568 HPRD:11523 RTN4RL1 NGRH2|NgR3 reticulon 4 receptor-like 1 protein-coding Atac153_MAPQ30_peak_4183 chr20 56484208 56484208 + 3.83555 NA Intergenic Intergenic 13758 NR_039757 100616353 NR_039757 miRBase:MI0016899 MIR4532 - microRNA 4532 ncRNA Atac153_MAPQ30_peak_2128 chr15 34643816 34643816 + 3.83555 NA intron (NM_001284292, intron 4 of 7) intron (NM_001284292, intron 4 of 7) 8300 NM_001284292 256646 Hs.525769 NM_175741 HPRD:10606 NUTM1 C15orf55|FAM22H|NUT NUT midline carcinoma, family member 1 protein-coding Atac153_MAPQ30_peak_549 chr1 225048692 225048692 + 3.83555 NA Intergenic Intergenic -68664 NM_001145154 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein, axonemal, heavy chain 14 protein-coding Atac153_MAPQ30_peak_5102 chr4 75988099 75988099 + 3.83555 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -92527 NR_121617 100507388 Hs.570765 NR_121617 ENSG00000249717 LOC100507388 - uncharacterized LOC100507388 ncRNA Atac153_MAPQ30_peak_4827 chr3 127503686 127503686 + 3.83555 NA intron (NM_001003794, intron 2 of 7) intron (NM_001003794, intron 2 of 7) 38039 NM_007283 11343 Hs.277035 NM_007283 HPRD:17574 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding Atac153_MAPQ30_peak_2747 chr17 19319896 19319896 + 3.83555 NA 3' UTR (NM_007148, exon 14 of 14) 3' UTR (NM_007148, exon 14 of 14) 5405 NM_007148 7732 Hs.189482 NM_007148 HPRD:03140 RNF112 BFP|ZNF179 ring finger protein 112 protein-coding Atac153_MAPQ30_peak_1404 chr11 132780303 132780303 + 3.83555 NA intron (NM_001012393, intron 2 of 7) intron (NM_001012393, intron 2 of 7) 32734 NM_002545 4978 Hs.4817 NM_002545 HPRD:07198 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule-like protein-coding Atac153_MAPQ30_peak_6288 chr8 11712371 11712371 + 3.83555 NA intron (NM_001908, intron 1 of 9) intron (NM_001908, intron 1 of 9) 13275 NM_147781 1508 Hs.520898 NM_001908 HPRD:00287 CTSB APPS|CPSB cathepsin B protein-coding Atac153_MAPQ30_peak_4928 chr3 183884313 183884313 + 3.83555 NA intron (NM_004423, intron 9 of 14) intron (NM_004423, intron 9 of 14) -8321 NM_001025205 1173 Hs.518460 NM_004068 HPRD:03014 AP2M1 AP50|CLAPM1|mu2 adaptor-related protein complex 2, mu 1 subunit protein-coding Atac153_MAPQ30_peak_5977 chr7 42776021 42776021 + 3.83555 NA Intergenic L2a|LINE|L2 -29975 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA Atac153_MAPQ30_peak_2732 chr17 17640439 17640439 + 3.83555 NA intron (NM_030665, intron 2 of 5) intron (NM_030665, intron 2 of 5) 42404 NR_024007 140771 Hs.352643 NM_144774 ENSG00000226746 SMCR5 NCRNA00034 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding) ncRNA Atac153_MAPQ30_peak_6931 chrX 18568229 18568229 + 3.83555 NA intron (NM_001037343, intron 4 of 21) intron (NM_001037343, intron 4 of 21) 107885 NM_001037343 6792 Hs.659851 NM_003159 HPRD:02190 CDKL5 EIEE2|ISSX|STK9 cyclin-dependent kinase-like 5 protein-coding Atac153_MAPQ30_peak_2242 chr15 74598781 74598781 + 3.83555 NA intron (NM_025055, intron 11 of 18) intron (NM_025055, intron 11 of 18) -12101 NR_108023 80125 Hs.383206 NM_025055 HPRD:09959 CCDC33 CT61 coiled-coil domain containing 33 protein-coding Atac153_MAPQ30_peak_4935 chr3 186449536 186449536 + 3.83555 NA intron (NM_001102416, intron 6 of 9) intron (NM_001102416, intron 6 of 9) 14438 NM_000893 3827 Hs.77741 NM_000893 KNG1 BDK|BK|KNG kininogen 1 protein-coding Atac153_MAPQ30_peak_1424 chr12 2210529 2210529 + 3.83555 NA intron (NM_001129832, intron 1 of 47) intron (NM_001129832, intron 1 of 47) 48078 NM_199460 775 Hs.118262 NM_000719 CACNA1C CACH2|CACN2|CACNL1A1|CCHL1A1|CaV1.2|LQT8|TS calcium channel, voltage-dependent, L type, alpha 1C subunit protein-coding Atac153_MAPQ30_peak_3874 chr2 220104504 220104504 + 3.83555 NA exon (NM_001286427, exon 5 of 14) exon (NM_001286427, exon 5 of 14) 3849 NM_001286427 79411 Hs.181173 NM_024506 HPRD:11004 GLB1L - galactosidase, beta 1-like protein-coding Atac153_MAPQ30_peak_3997 chr20 9486431 9486431 + 3.83555 NA non-coding (NR_109957, exon 5 of 5) non-coding (NR_109957, exon 5 of 5) -8574 NM_001199897 24141 Hs.22920 NM_012261 HPRD:12736 LAMP5 BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-43 lysosomal-associated membrane protein family, member 5 protein-coding Atac153_MAPQ30_peak_3267 chr19 30693725 30693725 + 3.83555 NA Intergenic Intergenic -169603 NM_014717 9745 Hs.378901 NM_014717 HPRD:15825 ZNF536 - zinc finger protein 536 protein-coding Atac153_MAPQ30_peak_6219 chr7 156442623 156442623 + 3.83555 NA intron (NM_001184997, intron 3 of 8) L1M5|LINE|L1 6952 NM_001184997 140545 Hs.446194 NM_030936 HPRD:11517 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding Atac153_MAPQ30_peak_2599 chr16 83113849 83113849 + 3.83555 NA intron (NM_001220489, intron 3 of 12) intron (NM_001220489, intron 3 of 12) -89946 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA Atac153_MAPQ30_peak_5535 chr5 178083769 178083769 + 3.83555 NA Intergenic Intergenic -29715 NM_020666 57396 Hs.406557 NM_020666 HPRD:12140 CLK4 - CDC-like kinase 4 protein-coding Atac153_MAPQ30_peak_2440 chr16 23296185 23296185 + 3.83555 NA Intergenic MER102a|DNA|hAT-Charlie -17406 NM_000336 6338 Hs.414614 NM_000336 HPRD:02861 SCNN1B BESC1|ENaCb|ENaCbeta|SCNEB sodium channel, non-voltage-gated 1, beta subunit protein-coding Atac153_MAPQ30_peak_4277 chr21 39732356 39732356 + 3.83555 NA Intergenic L2a|LINE|L2 -14358 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA Atac153_MAPQ30_peak_2057 chr14 99648290 99648290 + 3.83555 NA intron (NM_001282238, intron 2 of 2) intron (NM_001282238, intron 2 of 2) 89760 NM_022898 64919 Hs.709690 NM_022898 HPRD:05950 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|RIT1|ZNF856B|hRIT1-alpha B-cell CLL/lymphoma 11B (zinc finger protein) protein-coding Atac153_MAPQ30_peak_6565 chr8 145094768 145094768 + 3.83555 NA intron (NM_001134374, intron 1 of 3) intron (NM_001134374, intron 1 of 3) 8186 NM_001134374 375686 Hs.97726 NM_198572 HPRD:15433 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding Atac153_MAPQ30_peak_5517 chr5 176104880 176104880 + 3.83555 NA Intergenic MamGypLTR2b|LTR|Gypsy 30492 NM_012171 26262 Hs.532129 NM_012171 HPRD:18198 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding Atac153_MAPQ30_peak_2725 chr17 16838019 16838019 + 3.83555 NA Intergenic Intergenic 37383 NM_012452 23495 Hs.158341 NM_012452 HPRD:05365 TNFRSF13B CD267|CVID|CVID2|RYZN|TACI|TNFRSF14B tumor necrosis factor receptor superfamily, member 13B protein-coding Atac153_MAPQ30_peak_4001 chr20 13254915 13254915 + 3.83555 NA intron (NM_080826, intron 2 of 5) intron (NM_080826, intron 2 of 5) -34581 NR_040043 100505536 Hs.665253 NR_040043 ISM1-AS1 - ISM1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_7255 chrX 145026551 145026551 + 3.83555 NA Intergenic MER50|LTR|ERV1 47793 NR_106783 102466721 NR_106783 MIR892C hsa-mir-892c microRNA 892c ncRNA Atac153_MAPQ30_peak_3260 chr19 28684368 28684368 + 3.83555 NA Intergenic LTR16C|LTR|ERVL -399520 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA Atac153_MAPQ30_peak_5243 chr5 6574713 6574713 + 3.83555 NA Intergenic Intergenic -7536 NR_024423 255167 Hs.435515 NR_024423 ENSG00000250056 LINC01018 - long intergenic non-protein coding RNA 1018 ncRNA Atac153_MAPQ30_peak_346 chr1 117209157 117209157 + 3.83555 NA 5' UTR (NM_001542, exon 1 of 11) 5' UTR (NM_001542, exon 1 of 11) 421 NM_001542 3321 Hs.171057 NM_001542 HPRD:04602 IGSF3 EWI-3|V8 immunoglobulin superfamily, member 3 protein-coding Atac153_MAPQ30_peak_6767 chr9 117080441 117080441 + 3.83555 NA Intergenic Zaphod|DNA|hAT-Tip100 -4862 NM_000607 5004 Hs.522356 NM_000607 HPRD:00724 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding Atac153_MAPQ30_peak_5689 chr6 43331346 43331346 + 3.83555 NA intron (NM_014345, intron 2 of 9) intron (NM_014345, intron 2 of 9) 5835 NM_014345 24149 Hs.509718 NM_014345 HPRD:11707 ZNF318 TZF|ZFP318 zinc finger protein 318 protein-coding Atac153_MAPQ30_peak_2461 chr16 27303107 27303107 + 3.83555 NA Intergenic Intergenic -22123 NM_000418 3566 Hs.513457 NM_000418 HPRD:00990 IL4R CD124|IL-4RA|IL4RA interleukin 4 receptor protein-coding Atac153_MAPQ30_peak_594 chr1 234367694 234367694 + 3.83555 NA intron (NM_001300845, intron 2 of 6) intron (NM_001300845, intron 2 of 6) 17737 NM_001300845 148641 Hs.158748 NM_173508 HPRD:15378 SLC35F3 - solute carrier family 35, member F3 protein-coding Atac153_MAPQ30_peak_5228 chr5 3520634 3520634 + 3.83555 NA intron (NR_033898, intron 2 of 4) intron (NR_033898, intron 2 of 4) 15574 NR_033898 285577 Hs.582442 NR_033898 ENSG00000248118 LINC01019 - long intergenic non-protein coding RNA 1019 ncRNA Atac153_MAPQ30_peak_4407 chr22 32851523 32851523 + 3.83555 NA intron (NM_174932, intron 1 of 14) MIRb|SINE|MIR 1850 NM_174932 254240 Hs.372939 NM_174932 HPRD:16560 BPIFC BPIL2 BPI fold containing family C protein-coding Atac153_MAPQ30_peak_1015 chr10 132918936 132918936 + 3.83555 NA intron (NM_174937, intron 8 of 11) intron (NM_174937, intron 8 of 11) 25455 NR_120623 101927489 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1254 chr11 70919464 70919464 + 3.83555 NA intron (NM_012309, intron 1 of 22) intron (NM_012309, intron 1 of 22) 16378 NM_012309 22941 Hs.268726 NM_012309 HPRD:04479 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding Atac153_MAPQ30_peak_1451 chr12 5918385 5918385 + 3.83555 NA intron (NM_001278596, intron 7 of 25) intron (NM_001278596, intron 7 of 25) 136040 NM_001278596 57101 Hs.148970 NM_020373 HPRD:11634 ANO2 C12orf3|TMEM16B anoctamin 2, calcium activated chloride channel protein-coding Atac153_MAPQ30_peak_415 chr1 162600520 162600520 + 3.83555 NA Intergenic Intergenic -1708 NM_006182 4921 Hs.275757 NM_006182 HPRD:01868 DDR2 MIG20a|NTRKR3|TKT|TYRO10 discoidin domain receptor tyrosine kinase 2 protein-coding Atac153_MAPQ30_peak_3019 chr18 12255976 12255976 + 3.83555 NA intron (NR_036468, intron 1 of 4) intron (NR_036468, intron 1 of 4) 1616 NR_036468 1149 Hs.249129 NM_001279 CIDEA CIDE-A cell death-inducing DFFA-like effector a protein-coding Atac153_MAPQ30_peak_5178 chr4 164336678 164336678 + 3.83555 NA Intergenic THE1A|LTR|ERVL-MaLR 58369 NM_032136 84076 Hs.303923 NM_032136 HPRD:13159 TKTL2 - transketolase-like 2 protein-coding Atac153_MAPQ30_peak_3252 chr19 21776764 21776764 + 3.83555 NA Intergenic BSR/Beta|Satellite|Satellite 88327 NM_001001415 353088 Hs.572567 NM_001001415 HPRD:18342 ZNF429 - zinc finger protein 429 protein-coding Atac153_MAPQ30_peak_2656 chr17 2479794 2479794 + 3.83555 NA Intergenic Intergenic -17129 NM_000430 5048 Hs.77318 NM_000430 HPRD:03329 PAFAH1B1 LIS1|LIS2|MDCR|MDS|PAFAH platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) protein-coding Atac153_MAPQ30_peak_5506 chr5 173942936 173942936 + 3.83555 NA intron (NR_125806, intron 2 of 5) intron (NR_125806, intron 2 of 5) 179579 NR_125806 101928176 Hs.436014 NR_125806 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA Atac153_MAPQ30_peak_4990 chr4 6081911 6081911 + 3.83555 NA exon (NM_144720, exon 7 of 13) exon (NM_144720, exon 7 of 13) 120407 NM_001099433 152789 Hs.479066 NM_144720 HPRD:11292 JAKMIP1 Gababrbp|JAMIP1|MARLIN1 janus kinase and microtubule interacting protein 1 protein-coding Atac153_MAPQ30_peak_2974 chr17 80402640 80402640 + 3.83555 NA intron (NM_001100408, intron 4 of 5) CpG 4962 NM_001193655 79415 Hs.163113 NM_001033046 HPRD:14630 C17orf62 - chromosome 17 open reading frame 62 protein-coding Atac153_MAPQ30_peak_2531 chr16 62042064 62042064 + 3.83555 NA intron (NM_001796, intron 2 of 11) AluJo|SINE|Alu 28675 NM_001796 1006 Hs.368322 NM_001796 HPRD:04306 CDH8 Nbla04261 cadherin 8, type 2 protein-coding Atac153_MAPQ30_peak_66 chr1 11000773 11000773 + 3.83555 NA Intergenic MIR|SINE|MIR 41321 NM_001170754 148345 Hs.127026 NM_173507 HPRD:08780 C1orf127 - chromosome 1 open reading frame 127 protein-coding Atac153_MAPQ30_peak_7177 chrX 118111918 118111918 + 3.83555 NA intron (NM_001289109, intron 1 of 11) intron (NM_001289109, intron 1 of 11) 1623 NM_001289109 79836 Hs.144266 NM_024778 HPRD:06708 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding Atac153_MAPQ30_peak_4569 chr3 12904016 12904016 + 3.83555 NA Intergenic Intergenic -20935 NM_001007073 6161 Hs.265174 NM_000994 HPRD:17995 RPL32 L32 ribosomal protein L32 protein-coding Atac153_MAPQ30_peak_3498 chr2 34176508 34176508 + 3.83555 NA Intergenic THE1B|LTR|ERVL-MaLR -223224 NR_003143 151325 Hs.528847 NM_207329 HPRD:14793 MYADML - myeloid-associated differentiation marker-like (pseudogene) pseudo Atac153_MAPQ30_peak_775 chr10 65734043 65734043 + 3.83555 NA Intergenic Intergenic 452920 NM_001001330 221035 Hs.499833 NM_001001330 HPRD:16582 REEP3 C10orf74 receptor accessory protein 3 protein-coding Atac153_MAPQ30_peak_5502 chr5 173412031 173412031 + 3.83555 NA Intergenic THE1C|LTR|ERVL-MaLR -4131 NM_001144954 133491 Hs.131469 NM_001144954 ENSG00000185056 C5orf47 - chromosome 5 open reading frame 47 protein-coding Atac153_MAPQ30_peak_3669 chr2 109951129 109951129 + 3.83555 NA intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -21048 NR_036224 100423027 NR_036224 miRBase:MI0015870 MIR4266 - microRNA 4266 ncRNA Atac153_MAPQ30_peak_3509 chr2 41859164 41859164 + 3.83555 NA Intergenic Intergenic -245531 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LOC388942 - uncharacterized LOC388942 ncRNA Atac153_MAPQ30_peak_2228 chr15 70799639 70799639 + 3.83555 NA Intergenic Intergenic 194981 NM_001008224 55075 Hs.108049 NM_018003 HPRD:11657 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding Atac153_MAPQ30_peak_6842 chr9 136862570 136862570 + 3.83555 NA Intergenic Intergenic -5124 NM_001134398 7410 Hs.369921 NM_003371 HPRD:02694 VAV2 VAV-2 vav 2 guanine nucleotide exchange factor protein-coding Atac153_MAPQ30_peak_1240 chr11 69295604 69295604 + 3.83555 NA Intergenic Intergenic -4725 NR_120543 101928292 Hs.736219 NR_120542 LINC01488 - long intergenic non-protein coding RNA 1488 ncRNA Atac153_MAPQ30_peak_3910 chr2 234980547 234980547 + 3.83555 NA intron (NM_006944, intron 7 of 7) L2b|LINE|L2 21201 NM_006944 6694 Hs.444488 NM_006944 HPRD:04029 SPP2 SPP-24|SPP24 secreted phosphoprotein 2, 24kDa protein-coding Atac153_MAPQ30_peak_173 chr1 32140747 32140747 + 3.83555 NA intron (NM_001856, intron 43 of 70) intron (NM_001856, intron 43 of 70) 29021 NM_001856 1307 Hs.368921 NM_001856 HPRD:00381 COL16A1 447AA collagen, type XVI, alpha 1 protein-coding Atac153_MAPQ30_peak_6066 chr7 76018345 76018345 + 3.83555 NA TTS (NM_080744) TTS (NM_080744) -8496 NM_007155 7784 Hs.656137 NM_007155 HPRD:01690 ZP3 ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 (sperm receptor) protein-coding Atac153_MAPQ30_peak_1148 chr11 36240317 36240317 + 3.83555 NA intron (NM_174902, intron 4 of 5) intron (NM_174902, intron 4 of 5) 70682 NM_001101653 29099 Hs.279836 NM_014186 COMMD9 - COMM domain containing 9 protein-coding Atac153_MAPQ30_peak_2169 chr15 57912191 57912191 + 3.83555 NA intron (NR_104371, intron 3 of 16) intron (NR_104371, intron 3 of 16) 28089 NM_001018091 145781 Hs.437256 NM_001018090 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding Atac153_MAPQ30_peak_4460 chr22 42828525 42828525 + 3.83555 NA promoter-TSS (NM_145912) promoter-TSS (NM_145912) -124 NM_145912 150372 Hs.436677 NM_145912 HPRD:16380 NFAM1 CNAIP|bK126B4.4 NFAT activating protein with ITAM motif 1 protein-coding Atac153_MAPQ30_peak_5526 chr5 177502230 177502230 + 3.83555 NA Intergenic Intergenic -38326 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding Atac153_MAPQ30_peak_5271 chr5 14338101 14338101 + 3.83555 NA intron (NM_007118, intron 11 of 56) intron (NM_007118, intron 11 of 56) 194272 NM_007118 7204 Hs.130031 NM_007118 HPRD:03537 TRIO ARHGEF23|tgat trio Rho guanine nucleotide exchange factor protein-coding Atac153_MAPQ30_peak_728 chr10 45385107 45385107 + 3.83555 NA intron (NR_033842, intron 2 of 7) intron (NR_033842, intron 2 of 7) -21657 NM_001123376 643236 Hs.292788 NM_001123376 TMEM72 C10orf127|KSP37|bA285G1.3 transmembrane protein 72 protein-coding Atac153_MAPQ30_peak_3726 chr2 129765518 129765518 + 3.83555 NA Intergenic Intergenic 143344 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA Atac153_MAPQ30_peak_256 chr1 49626823 49626823 + 3.83555 NA intron (NM_032785, intron 4 of 13) L1PA7|LINE|L1 310934 NR_046839 100874313 Hs.551277 NR_046839 AGBL4-IT1 - AGBL4 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_2160 chr15 52556594 52556594 + 3.83555 NA intron (NM_018728, intron 8 of 40) intron (NM_018728, intron 8 of 40) 12803 NR_031670 100302202 NR_031670 MIR1266 MIRN1266|hsa-mir-1266 microRNA 1266 ncRNA Atac153_MAPQ30_peak_3759 chr2 136574060 136574060 + 3.83555 NA intron (NM_002299, intron 6 of 16) MLT1K|LTR|ERVL-MaLR -3701 NR_045486 100507600 Hs.662020 NR_045486 ENSG00000226806 LOC100507600 - uncharacterized LOC100507600 ncRNA Atac153_MAPQ30_peak_4458 chr22 42728037 42728037 + 3.83555 NA Intergenic Intergenic 37177 NR_120597 102723775 Hs.335413 NR_120595 LINC01315 lnc-C22orf32-1 long intergenic non-protein coding RNA 1315 ncRNA Atac153_MAPQ30_peak_2993 chr18 6569810 6569810 + 3.83555 NA intron (NR_120518, intron 2 of 5) intron (NR_120518, intron 2 of 5) 58395 NR_120518 100130480 Hs.646267 NM_001243517 ENSG00000265944 LINC01387 C18orf64 long intergenic non-protein coding RNA 1387 ncRNA Atac153_MAPQ30_peak_6353 chr8 40940938 40940938 + 3.83555 NA Intergenic Intergenic -185595 NM_001135731 79698 Hs.591850 NM_024645 HPRD:07837 ZMAT4 - zinc finger, matrin-type 4 protein-coding Atac153_MAPQ30_peak_7131 chrX 97059913 97059913 + 3.83555 NA Intergenic Intergenic -240379 NR_125391 10824 Hs.654372 NR_125391 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5690 chr6 43489783 43489783 + 3.83555 NA TTS (NM_020750) TTS (NM_020750) 5006 NM_203290 9533 Hs.743509 NM_004875 HPRD:09661 POLR1C RPA39|RPA40|RPA5|RPAC1|TCS3 polymerase (RNA) I polypeptide C, 30kDa protein-coding Atac153_MAPQ30_peak_6747 chr9 111789499 111789499 + 3.83555 NA intron (NM_032012, intron 17 of 17) HAL1|LINE|L1 -13625 NM_001286974 8727 Hs.58488 NM_003798 HPRD:09210 CTNNAL1 ACRP|CLLP|alpha-CATU catenin (cadherin-associated protein), alpha-like 1 protein-coding Atac153_MAPQ30_peak_5602 chr6 15495892 15495892 + 3.83555 NA intron (NM_001267040, intron 6 of 17) intron (NM_001267040, intron 6 of 17) 167397 NR_036448 84062 Hs.571148 NM_032122 HPRD:06190 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding Atac153_MAPQ30_peak_2874 chr17 55899422 55899422 + 3.83555 NA Intergenic L1MEg|LINE|L1 28011 NM_016070 51649 Hs.5836 NM_016070 MRPS23 HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding Atac153_MAPQ30_peak_6064 chr7 75948142 75948142 + 3.83555 NA Intergenic Intergenic 16267 NM_001540 3315 Hs.520973 NM_001540 HPRD:09076 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock 27kDa protein 1 protein-coding Atac153_MAPQ30_peak_2526 chr16 58053466 58053466 + 3.83555 NA intron (NM_024598, intron 6 of 6) intron (NM_024598, intron 6 of 6) -5816 NM_002428 4324 Hs.80343 NM_002428 HPRD:03775 MMP15 MT2-MMP|MTMMP2|SMCP-2 matrix metallopeptidase 15 (membrane-inserted) protein-coding Atac153_MAPQ30_peak_2187 chr15 61290283 61290283 + 3.83555 NA intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 231219 NM_134261 6095 Hs.560343 NM_002943 HPRD:02896 RORA NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR-related orphan receptor A protein-coding Atac153_MAPQ30_peak_2604 chr16 84706690 84706690 + 3.83555 NA Intergenic Intergenic 24559 NM_024731 79786 Hs.222731 NM_024731 HPRD:12675 KLHL36 C16orf44 kelch-like family member 36 protein-coding Atac153_MAPQ30_peak_506 chr1 206194387 206194387 + 3.83555 NA Intergenic Intergenic -29896 NM_000707 553 Hs.1372 NM_000707 AVPR1B AVPR3 arginine vasopressin receptor 1B protein-coding Atac153_MAPQ30_peak_6326 chr8 27181654 27181654 + 3.83555 NA intron (NM_173174, intron 5 of 35) intron (NM_173174, intron 5 of 35) -1342 NM_173176 2185 Hs.491322 NM_004103 HPRD:03131 PTK2B CADTK|CAKB|FADK2|FAK2|PKB|PTK|PYK2|RAFTK protein tyrosine kinase 2 beta protein-coding Atac153_MAPQ30_peak_3966 chr2 242915363 242915363 + 3.83555 NA intron (NR_110592, intron 5 of 5) MLT1C|LTR|ERVL-MaLR 2529 NR_110592 102723927 Hs.733585 NR_110592 LOC102723927 - uncharacterized LOC102723927 ncRNA Atac153_MAPQ30_peak_4971 chr4 3419178 3419178 + 3.83555 NA exon (NM_002926, exon 9 of 17) exon (NM_002926, exon 9 of 17) -24482 NM_001297439 3083 Hs.104 NM_001528 HPRD:05184 HGFAC HGFA HGF activator protein-coding Atac153_MAPQ30_peak_1735 chr12 130934115 130934115 + 3.83555 NA intron (NM_015347, intron 6 of 18) intron (NM_015347, intron 6 of 18) 68295 NM_015347 23504 Hs.657441 NM_015347 HPRD:17183 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding Atac153_MAPQ30_peak_5678 chr6 41117533 41117533 + 3.83555 NA exon (NM_001271808, exon 5 of 5) exon (NM_001271808, exon 5 of 5) 4554 NM_178174 340205 Hs.117331 NM_178174 HPRD:11645 TREML1 GLTL1825|PRO3438|TLT-1|TLT1|dJ238O23.3 triggering receptor expressed on myeloid cells-like 1 protein-coding Atac153_MAPQ30_peak_4560 chr3 10991849 10991849 + 3.83555 NA Intergenic Intergenic -42571 NM_003042 6529 Hs.443874 NM_003042 HPRD:00664 SLC6A1 GABATHG|GABATR|GAT1 solute carrier family 6 (neurotransmitter transporter), member 1 protein-coding Atac153_MAPQ30_peak_1085 chr11 11356996 11356996 + 3.83555 NA intron (NM_198516, intron 7 of 10) intron (NM_198516, intron 7 of 10) 17908 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2, alpha 3 polypeptide protein-coding Atac153_MAPQ30_peak_153 chr1 26600826 26600826 + 3.83555 NA intron (NM_022778, intron 11 of 13) L2c|LINE|L2 5052 NM_001281518 64793 Hs.63795 NM_022778 HPRD:07844 CEP85 CCDC21 centrosomal protein 85kDa protein-coding Atac153_MAPQ30_peak_6423 chr8 96084573 96084573 + 3.83555 NA promoter-TSS (NR_036105) promoter-TSS (NR_036105) -569 NR_036105 100422964 NR_036105 MIR3150A MIR3150 microRNA 3150a ncRNA Atac153_MAPQ30_peak_6978 chrX 36188280 36188280 + 3.83555 NA Intergenic L1M4b|LINE|L1 -58616 NM_001098843 645090 Hs.632791 NM_001098843 ENSG00000205081 CXorf30 - chromosome X open reading frame 30 protein-coding Atac153_MAPQ30_peak_6724 chr9 100069260 100069260 + 3.83555 NA promoter-TSS (NM_020893) promoter-TSS (NM_020893) -650 NM_020893 100499483 Hs.435629 NM_020893 ENSG00000197816 CCDC180 BDAG1|C9orf174|KIAA1529 coiled-coil domain containing 180 protein-coding Atac153_MAPQ30_peak_4715 chr3 54998978 54998978 + 3.83555 NA intron (NM_018398, intron 27 of 37) intron (NM_018398, intron 27 of 37) -36906 NM_020678 57408 Hs.591668 NM_020678 HPRD:13718 LRTM1 - leucine-rich repeats and transmembrane domains 1 protein-coding Atac153_MAPQ30_peak_4216 chr20 62222606 62222606 + 3.83555 NA intron (NM_012384, intron 9 of 9) (CA)n|Simple_repeat|Simple_repeat -17014 NM_001037335 85441 Hs.517180 NM_033405 HPRD:11459 HELZ2 PDIP-1|PRIC285 helicase with zinc finger 2, transcriptional coactivator protein-coding Atac153_MAPQ30_peak_6569 chr8 145705027 145705027 + 3.83555 NA Intergenic Intergenic -3309 NM_003923 8928 Hs.708365 NM_003923 HPRD:04689 FOXH1 FAST-1|FAST1 forkhead box H1 protein-coding Atac153_MAPQ30_peak_846 chr10 87825563 87825563 + 3.83555 NA intron (NM_017551, intron 4 of 15) AmnSINE1|SINE|Deu 198982 NR_029907 442911 NR_029907 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA Atac153_MAPQ30_peak_5305 chr5 50685034 50685034 + 3.83555 NA intron (NM_002202, intron 3 of 5) intron (NM_002202, intron 3 of 5) -5868 NR_046243 642366 Hs.544139 NR_046243 LOC642366 - uncharacterized LOC642366 ncRNA Atac153_MAPQ30_peak_72 chr1 12539938 12539938 + 3.83555 NA intron (NM_015378, intron 67 of 69) intron (NM_015378, intron 67 of 69) -27362 NR_003025 677885 Hs.658450 NR_003025 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA Atac153_MAPQ30_peak_3685 chr2 119881564 119881564 + 3.83555 NA Intergenic Intergenic 34907 NM_182528 165257 Hs.433493 NM_182528 HPRD:12713 C1QL2 C1QTNF10|CTRP10 complement component 1, q subcomponent-like 2 protein-coding Atac153_MAPQ30_peak_3133 chr18 61879252 61879252 + 3.83555 NA intron (NR_033881, intron 2 of 9) intron (NR_033881, intron 2 of 9) 48038 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LOC400654 - uncharacterized LOC400654 ncRNA Atac153_MAPQ30_peak_4047 chr20 24746294 24746294 + 3.83555 NA Intergenic Intergenic -183572 NM_003650 8530 Hs.143212 NM_003650 HPRD:04458 CST7 CMAP cystatin F (leukocystatin) protein-coding Atac153_MAPQ30_peak_888 chr10 104572697 104572697 + 3.83555 NA exon (NM_017787, exon 4 of 4) exon (NM_017787, exon 4 of 4) 24593 NM_000102 1586 Hs.438016 NM_000102 HPRD:01944 CYP17A1 CPT7|CYP17|P450C17|S17AH cytochrome P450, family 17, subfamily A, polypeptide 1 protein-coding Atac153_MAPQ30_peak_2117 chr15 29322149 29322149 + 3.83555 NA intron (NM_001130414, intron 2 of 12) LTR41B|LTR|ERVL 108309 NM_001130414 321 Hs.618112 NM_005503 HPRD:04090 APBA2 D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L amyloid beta (A4) precursor protein-binding, family A, member 2 protein-coding Atac153_MAPQ30_peak_878 chr10 103900031 103900031 + 3.83555 NA exon (NM_001288727, exon 5 of 12) exon (NM_001288727, exon 5 of 12) 7280 NM_001288728 23082 Hs.533551 NM_015062 HPRD:15173 PPRC1 PRC peroxisome proliferator-activated receptor gamma, coactivator-related 1 protein-coding Atac153_MAPQ30_peak_7275 chrX 150069076 150069076 + 3.83555 NA Intergenic Intergenic -1787 NM_134446 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule-like 2 protein-coding Atac153_MAPQ30_peak_4488 chr22 46911195 46911195 + 3.83555 NA intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 21872 NM_014246 9620 Hs.252387 NM_014246 HPRD:05160 CELSR1 CDHF9|FMI2|HFMI2|ME2 cadherin, EGF LAG seven-pass G-type receptor 1 protein-coding Atac153_MAPQ30_peak_6280 chr8 11296911 11296911 + 3.83555 NA TTS (NR_026814) TTS (NR_026814) 27365 NM_053279 83648 Hs.124299 NM_053279 HPRD:12924 FAM167A C8orf13|D8S265 family with sequence similarity 167, member A protein-coding Atac153_MAPQ30_peak_3778 chr2 159587072 159587072 + 3.83555 NA Intergenic Intergenic -64757 NM_001017920 92196 Hs.59761 NM_001017920 HPRD:18709 DAPL1 - death associated protein-like 1 protein-coding Atac153_MAPQ30_peak_6818 chr9 131655594 131655594 + 3.83555 NA intron (NM_001127244, intron 2 of 3) intron (NM_001127244, intron 2 of 3) 10813 NM_001127244 56262 Hs.643600 NM_019594 ENSG00000136802 LRRC8A AGM5|LRRC8 leucine rich repeat containing 8 family, member A protein-coding Atac153_MAPQ30_peak_92 chr1 16294717 16294717 + 3.83555 NA intron (NM_001287604, intron 2 of 15) intron (NM_001287604, intron 2 of 15) 7910 NM_001287603 7709 Hs.433764 NM_003443 HPRD:04968 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding Atac153_MAPQ30_peak_7290 chrX 153357753 153357753 + 3.83555 NA 5' UTR (NM_004992, exon 2 of 4) 5' UTR (NM_004992, exon 2 of 4) 5435 NM_001110792 4204 Hs.200716 NM_004992 HPRD:02050 MECP2 AUTSX3|MRX16|MRX79|MRXS13|MRXSL|PPMX|RS|RTS|RTT methyl CpG binding protein 2 protein-coding Atac153_MAPQ30_peak_3214 chr19 8542024 8542024 + 3.83555 NA intron (NM_001297418, intron 10 of 13) intron (NM_001297418, intron 10 of 13) 25514 NM_032152 84106 Hs.465812 NM_032152 HPRD:05926 PRAM1 PML-RAR|PRAM-1 PML-RARA regulated adaptor molecule 1 protein-coding Atac153_MAPQ30_peak_2059 chr14 100016384 100016384 + 3.83555 NA intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 54343 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding Atac153_MAPQ30_peak_2083 chr14 103438018 103438018 + 3.83555 NA intron (NM_006035, intron 13 of 36) intron (NM_006035, intron 13 of 36) 49025 NM_030943 81693 Hs.534494 NM_030943 HPRD:09314 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding Atac153_MAPQ30_peak_5501 chr5 172695339 172695339 + 3.83555 NA Intergenic Intergenic -33024 NM_004387 1482 Hs.54473 NM_004387 HPRD:02787 NKX2-5 CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3 NK2 homeobox 5 protein-coding Atac153_MAPQ30_peak_5636 chr6 31692885 31692885 + 3.83555 NA 3' UTR (NM_138272, exon 6 of 6) 3' UTR (NM_138272, exon 6 of 6) 1764 NM_138273 80739 Hs.247879 NM_025260 HPRD:09405 C6orf25 G6b|NG31 chromosome 6 open reading frame 25 protein-coding Atac153_MAPQ30_peak_2032 chr14 93474307 93474307 + 3.83555 NA intron (NM_001142593, intron 4 of 10) intron (NM_001142593, intron 4 of 10) -59490 NR_002808 319085 Hs.612888 NR_002808 ENSG00000258730 ITPK1-AS1 C14orf85|ITPK1-AS|ITPK1AS|NCRNA00203 ITPK1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6277 chr8 10534462 10534462 + 3.83555 NA intron (NM_001040032, intron 2 of 3) intron (NM_001040032, intron 2 of 3) 4315 NM_001040032 203076 Hs.371776 NM_001040032 ENSG00000171060 C8orf74 - chromosome 8 open reading frame 74 protein-coding Atac153_MAPQ30_peak_2687 chr17 7285765 7285765 + 3.83555 NA intron (NM_003985, intron 1 of 12) intron (NM_003985, intron 1 of 12) 1472 NM_003985 8711 Hs.203420 NM_003985 HPRD:09730 TNK1 - tyrosine kinase, non-receptor, 1 protein-coding Atac153_MAPQ30_peak_665 chr10 11903294 11903294 + 3.83555 NA intron (NR_038222, intron 4 of 5) L2c|LINE|L2 33415 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3552 chr2 62535659 62535659 + 3.83555 NA Intergenic Intergenic 102698 NR_049824 100847087 NR_049824 miRBase:MI0018171 MIR5192 - microRNA 5192 ncRNA Atac153_MAPQ30_peak_6136 chr7 131342776 131342776 + 3.83555 NA Intergenic Intergenic -101400 NM_001018111 5420 Hs.744213 NM_005397 HPRD:04025 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin-like protein-coding Atac153_MAPQ30_peak_1043 chr11 3044196 3044196 + 3.83555 NA intron (NM_001014437, intron 10 of 22) intron (NM_001014437, intron 10 of 22) -30589 NM_005969 4676 Hs.731784 NM_005969 HPRD:11873 NAP1L4 NAP1L4b|NAP2|NAP2L|hNAP2 nucleosome assembly protein 1-like 4 protein-coding Atac153_MAPQ30_peak_2675 chr17 5484545 5484545 + 3.83555 NA intron (NM_001033053, intron 3 of 15) intron (NM_001033053, intron 3 of 15) 3287 NM_033004 22861 Hs.652273 NM_014922 HPRD:07364 NLRP1 CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family, pyrin domain containing 1 protein-coding Atac153_MAPQ30_peak_1691 chr12 124607197 124607197 + 3.83555 NA intron (NM_001204299, intron 2 of 4) L1MC4a|LINE|L1 149435 NM_001204299 100533183 Hs.432901 NM_001204299 ENSG00000255906 ZNF664-FAM101A - protein FAM101A protein-coding Atac153_MAPQ30_peak_5536 chr5 178190971 178190971 + 3.83555 NA TTS (NR_024035) TTS (NR_024035) 12306 NR_024035 729522 Hs.382790 NR_024035 AACSP1 AACSL acetoacetyl-CoA synthetase pseudogene 1 pseudo Atac153_MAPQ30_peak_6073 chr7 90211552 90211552 + 3.83555 NA Intergenic L1MB3|LINE|L1 -14124 NM_001287135 5218 Hs.258576 NM_012395 HPRD:15121 CDK14 PFTAIRE1|PFTK1 cyclin-dependent kinase 14 protein-coding Atac153_MAPQ30_peak_6164 chr7 138336137 138336137 + 3.83555 NA intron (NM_174959, intron 3 of 11) intron (NM_174959, intron 3 of 11) 12832 NM_174959 136306 Hs.99414 NM_174959 HPRD:11235 SVOPL - SVOP-like protein-coding Atac153_MAPQ30_peak_3016 chr18 11654850 11654850 + 3.83555 NA promoter-TSS (NR_106975) promoter-TSS (NR_106975) 90 NR_106975 102465690 NR_106975 MIR7153 hsa-mir-7153 microRNA 7153 ncRNA Atac153_MAPQ30_peak_5422 chr5 138842169 138842169 + 3.83555 NA intron (NR_121659, intron 1 of 5) intron (NR_121659, intron 1 of 5) 159 NR_121659 641700 Hs.483538 NM_001077693 ECSCR ARIA|ECSM2 endothelial cell surface expressed chemotaxis and apoptosis regulator protein-coding Atac153_MAPQ30_peak_3426 chr2 15879378 15879378 + 3.83555 NA Intergenic L1ME1|LINE|L1 48472 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LOC101926966 - uncharacterized LOC101926966 ncRNA Atac153_MAPQ30_peak_5298 chr5 36697673 36697673 + 3.83555 NA Intergenic L2c|LINE|L2 91216 NM_001289940 6507 Hs.481918 NM_004172 HPRD:02523 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 (glial high affinity glutamate transporter), member 3 protein-coding Atac153_MAPQ30_peak_1233 chr11 67040704 67040704 + 3.83555 NA intron (NM_001619, intron 1 of 20) intron (NM_001619, intron 1 of 20) 6799 NM_001619 156 Hs.83636 NM_001619 HPRD:00182 ADRBK1 BARK1|BETA-ARK1|GRK2 adrenergic, beta, receptor kinase 1 protein-coding Atac153_MAPQ30_peak_5362 chr5 102763222 102763222 + 3.83555 NA Intergenic MIR|SINE|MIR 114464 NR_104670 102467212 Hs.641885 NR_104670 LOC102467212 - uncharacterized LOC102467212 ncRNA Atac153_MAPQ30_peak_592 chr1 234227669 234227669 + 3.83555 NA intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) -122288 NM_001300845 148641 Hs.158748 NM_173508 HPRD:15378 SLC35F3 - solute carrier family 35, member F3 protein-coding Atac153_MAPQ30_peak_6564 chr8 144963703 144963703 + 3.83555 NA Intergenic HERV16-int|LTR|ERVL -11071 NM_031308 83481 Hs.200412 NM_031308 EPPK1 EPIPL|EPIPL1 epiplakin 1 protein-coding Atac153_MAPQ30_peak_6479 chr8 128537893 128537893 + 3.83555 NA Intergenic Intergenic -43509 NR_117100 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLo-1|LINC00860 cancer susceptibility candidate 8 (non-protein coding) ncRNA Atac153_MAPQ30_peak_3755 chr2 134886832 134886832 + 3.83555 NA Intergenic MLT1D|LTR|ERVL-MaLR 2136 NR_037450 100500878 NR_037450 miRBase:MI0016080 MIR3679 - microRNA 3679 ncRNA Atac153_MAPQ30_peak_6977 chrX 35992414 35992414 + 3.83555 NA intron (NM_152632, intron 13 of 15) intron (NM_152632, intron 13 of 15) -18984 NR_104642 101928564 Hs.575728 NR_104642 LOC101928564 - uncharacterized LOC101928564 ncRNA Atac153_MAPQ30_peak_824 chr10 80867099 80867099 + 3.83555 NA intron (NM_020338, intron 1 of 24) MIR|SINE|MIR 38307 NM_020338 57178 Hs.193118 NM_020338 HPRD:12115 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 zinc finger, MIZ-type containing 1 protein-coding Atac153_MAPQ30_peak_7039 chrX 53560831 53560831 + 3.83555 NA intron (NM_031407, intron 83 of 83) intron (NM_031407, intron 83 of 83) 22471 NR_029513 407054 NR_029513 MIR98 MIRN98|hsa-mir-98|miR-98 microRNA 98 ncRNA Atac153_MAPQ30_peak_4704 chr3 53118620 53118620 + 3.83555 NA Intergenic Intergenic -38531 NM_016329 51460 Hs.343679 NM_016329 HPRD:09539 SFMBT1 RU1|SFMBT|hSFMBT Scm-like with four mbt domains 1 protein-coding Atac153_MAPQ30_peak_455 chr1 181487924 181487924 + 3.83555 NA intron (NM_001205293, intron 3 of 47) intron (NM_001205293, intron 3 of 47) 35238 NM_001205294 777 Hs.437444 NM_000721 HPRD:03006 CACNA1E BII|CACH6|CACNL1A6|Cav2.3 calcium channel, voltage-dependent, R type, alpha 1E subunit protein-coding Atac153_MAPQ30_peak_305 chr1 94143609 94143609 + 3.83555 NA intron (NM_001261408, intron 3 of 13) intron (NM_001261408, intron 3 of 13) 3317 NM_001261409 8412 Hs.36958 NM_003567 HPRD:05268 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding Atac153_MAPQ30_peak_5762 chr6 112054340 112054340 + 3.83555 NA intron (NM_002037, intron 3 of 13) intron (NM_002037, intron 3 of 13) -13075 NM_153047 2534 Hs.390567 NM_002037 HPRD:00655 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding Atac153_MAPQ30_peak_593 chr1 234366787 234366787 + 3.83555 NA intron (NM_001300845, intron 1 of 6) intron (NM_001300845, intron 1 of 6) 16830 NM_001300845 148641 Hs.158748 NM_173508 HPRD:15378 SLC35F3 - solute carrier family 35, member F3 protein-coding Atac153_MAPQ30_peak_3353 chr19 55705838 55705838 + 3.83555 NA intron (NM_002842, intron 10 of 19) intron (NM_002842, intron 10 of 19) -14118 NM_003180 6861 Hs.631566 NM_003180 SYT5 - synaptotagmin V protein-coding Atac153_MAPQ30_peak_83 chr1 15113094 15113094 + 3.83555 NA intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) -137531 NM_001018000 23254 Hs.368823 NM_015209 HPRD:11122 KAZN KAZ kazrin, periplakin interacting protein protein-coding Atac153_MAPQ30_peak_6104 chr7 106361659 106361659 + 3.83555 NA Intergenic Charlie3|DNA|hAT-Charlie -60025 NM_175884 168455 Hs.29692 NM_175884 HPRD:08202 CCDC71L C7orf74 coiled-coil domain containing 71-like protein-coding Atac153_MAPQ30_peak_400 chr1 158068014 158068014 + 3.83555 NA 3' UTR (NM_018240, exon 15 of 15) 3' UTR (NM_018240, exon 15 of 15) 42416 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LOC646268 - hCG1654703 ncRNA Atac153_MAPQ30_peak_2043 chr14 95924006 95924006 + 3.83555 NA intron (NM_152592, intron 3 of 16) intron (NM_152592, intron 3 of 16) 18167 NM_152592 161176 Hs.354645 NM_152592 HPRD:12652 SYNE3 C14orf49|NET53|Nesp3 spectrin repeat containing, nuclear envelope family member 3 protein-coding Atac153_MAPQ30_peak_3943 chr2 239647898 239647898 + 3.83555 NA Intergenic Intergenic -108775 NM_057179 117581 Hs.422585 NM_057179 HPRD:09616 TWIST2 DERMO1|FFDD3|SETLSS|bHLHa39 twist family bHLH transcription factor 2 protein-coding Atac153_MAPQ30_peak_5688 chr6 43152380 43152380 + 3.83555 NA exon (NM_015089, exon 2 of 41) exon (NM_015089, exon 2 of 41) 2458 NM_015089 23113 Hs.485434 NM_015089 HPRD:06317 CUL9 H7AP1|PARC cullin 9 protein-coding Atac153_MAPQ30_peak_6088 chr7 100229718 100229718 + 3.83555 NA exon (NM_001206855, exon 4 of 15) exon (NM_001206855, exon 4 of 15) 1555 NM_001206855 7036 Hs.544932 NM_003227 HPRD:05282 TFR2 HFE3|TFRC2 transferrin receptor 2 protein-coding Atac153_MAPQ30_peak_7224 chrX 135003867 135003867 + 3.83555 NA Intergenic LTR43-int|LTR|ERV1 28082 NM_018666 55511 Hs.195292 NM_018666 HPRD:02290 SAGE1 CT14|SAGE sarcoma antigen 1 protein-coding Atac153_MAPQ30_peak_6665 chr9 86077359 86077359 + 3.83555 NA intron (NM_001244959, intron 1 of 14) MamGypLTR1a|LTR|Gypsy 5298 NM_001244960 257019 Hs.127535 NM_174938 HPRD:07402 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding Atac153_MAPQ30_peak_3350 chr19 54638650 54638650 + 3.83555 NA Intergenic MER5A|DNA|hAT-Charlie -2786 NM_014516 4849 Hs.343571 NM_014516 HPRD:05368 CNOT3 LENG2|NOT3|NOT3H CCR4-NOT transcription complex, subunit 3 protein-coding Atac153_MAPQ30_peak_6858 chr9 138580680 138580680 + 3.83555 NA Intergenic Intergenic 10694 NM_001012415 402381 Hs.120464 NM_001012415 HPRD:16678 SOHLH1 C9orf157|NOHLH|SPATA27|TEB2|bA100C15.3|bHLHe80 spermatogenesis and oogenesis specific basic helix-loop-helix 1 protein-coding Atac153_MAPQ30_peak_2456 chr16 26684195 26684195 + 3.83555 NA Intergenic Intergenic -394024 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding Atac153_MAPQ30_peak_7014 chrX 47404145 47404145 + 3.83555 NA Intergenic Intergenic -16354 NM_001654 369 Hs.446641 NM_001654 HPRD:02405 ARAF A-RAF|ARAF1|PKS2|RAFA1 A-Raf proto-oncogene, serine/threonine kinase protein-coding Atac153_MAPQ30_peak_507 chr1 206212572 206212572 + 3.83555 NA Intergenic Intergenic -11711 NM_000707 553 Hs.1372 NM_000707 AVPR1B AVPR3 arginine vasopressin receptor 1B protein-coding Atac153_MAPQ30_peak_659 chr10 7759342 7759342 + 3.83555 NA intron (NM_002216, intron 5 of 20) intron (NM_002216, intron 5 of 20) 14106 NM_002216 3698 Hs.75285 NM_002216 HPRD:00890 ITIH2 H2P|SHAP inter-alpha-trypsin inhibitor heavy chain 2 protein-coding Atac153_MAPQ30_peak_6536 chr8 141975476 141975476 + 3.83555 NA intron (NM_153831, intron 1 of 31) intron (NM_153831, intron 1 of 31) 35936 NM_153831 5747 Hs.395482 NM_005607 HPRD:02859 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding Atac153_MAPQ30_peak_379 chr1 154166446 154166446 + 3.83555 NA promoter-TSS (NR_030600) promoter-TSS (NR_030600) -227 NR_030600 100126346 NR_030600 miRBase:MI0005545 MIR190B MIRN190B microRNA 190b ncRNA Atac153_MAPQ30_peak_703 chr10 30284515 30284515 + 3.83555 NA Intergenic Intergenic 63973 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 KIAA1462 JCAD KIAA1462 protein-coding Atac153_MAPQ30_peak_4847 chr3 133697415 133697415 + 3.83555 NA intron (NM_005630, intron 2 of 13) intron (NM_005630, intron 2 of 13) -48759 NM_025041 80111 Hs.287691 NM_025041 HPRD:07981 C3orf36 - chromosome 3 open reading frame 36 protein-coding Atac153_MAPQ30_peak_6936 chrX 19276983 19276983 + 3.83555 NA Intergenic Intergenic -85028 NM_001173455 5160 Hs.530331 NM_000284 HPRD:02420 PDHA1 PDHA|PDHCE1A|PHE1A pyruvate dehydrogenase (lipoamide) alpha 1 protein-coding Atac153_MAPQ30_peak_2982 chr18 676858 676858 + 3.83555 NA intron (NM_202758, intron 13 of 14) intron (NM_202758, intron 13 of 14) -18518 NM_001012716 494514 Hs.274959 NM_001012716 HPRD:18668 TYMSOS C18orf56 TYMS opposite strand protein-coding Atac153_MAPQ30_peak_7087 chrX 69345768 69345768 + 3.83555 NA Intergenic Intergenic -7550 NM_001551 3476 Hs.496267 NM_001551 HPRD:02140 IGBP1 ALPHA-4|IBP1 immunoglobulin (CD79A) binding protein 1 protein-coding Atac153_MAPQ30_peak_1951 chr14 65181969 65181969 + 3.83555 NA intron (NM_015549, intron 1 of 14) intron (NM_015549, intron 1 of 14) 10776 NM_015549 26030 Hs.509637 NM_015549 HPRD:17861 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding Atac153_MAPQ30_peak_1347 chr11 118475981 118475981 + 3.83555 NA Intergenic Intergenic -1232 NM_015157 23187 Hs.504062 NM_015157 HPRD:15128 PHLDB1 LL5A pleckstrin homology-like domain, family B, member 1 protein-coding Atac153_MAPQ30_peak_1132 chr11 32120487 32120487 + 3.83555 NA intron (NM_002901, intron 3 of 5) MLT1J2|LTR|ERVL-MaLR 8010 NM_002901 5954 Hs.97887 NM_002901 HPRD:04111 RCN1 HEL-S-84|PIG20|RCAL|RCN reticulocalbin 1, EF-hand calcium binding domain protein-coding Atac153_MAPQ30_peak_688 chr10 21063269 21063269 + 3.83555 NA Intergenic Intergenic 123262 NM_006393 10529 Hs.5025 NM_006393 HPRD:10403 NEBL LASP2|LNEBL nebulette protein-coding Atac153_MAPQ30_peak_2780 chr17 26290036 26290036 + 3.83555 NA Intergenic MLT1G1|LTR|ERVL-MaLR -69627 NM_001076680 201229 Hs.687951 NM_001076680 ENSG00000232859 LYRM9 C17orf108 LYR motif containing 9 protein-coding Atac153_MAPQ30_peak_2784 chr17 27225088 27225088 + 3.83555 NA promoter-TSS (NM_004475) promoter-TSS (NM_004475) -373 NM_004475 2319 Hs.514038 NM_004475 HPRD:00580 FLOT2 ECS-1|ECS1|ESA|ESA1|M17S1 flotillin 2 protein-coding Atac153_MAPQ30_peak_6954 chrX 23408775 23408775 + 3.83555 NA intron (NM_173495, intron 2 of 2) intron (NM_173495, intron 2 of 2) 55790 NM_173495 139411 Hs.319503 NM_173495 PTCHD1 - patched domain containing 1 protein-coding Atac153_MAPQ30_peak_601 chr1 235715354 235715354 + 3.83555 NA 3' UTR (NM_004485, exon 3 of 3) 3' UTR (NM_004485, exon 3 of 3) -47573 NM_152490 148789 Hs.498143 NM_152490 HPRD:16533 B3GALNT2 B3GalNAc-T2|MDDGA11 beta-1,3-N-acetylgalactosaminyltransferase 2 protein-coding Atac153_MAPQ30_peak_1712 chr12 127650918 127650918 + 3.83555 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -105976 NR_104646 101927592 Hs.385663 NR_104646 ENSG00000249345 LOC101927592 - uncharacterized LOC101927592 ncRNA Atac153_MAPQ30_peak_4319 chr21 45945854 45945854 + 3.83555 NA intron (NM_144991, intron 7 of 11) intron (NM_144991, intron 7 of 11) 8756 NR_026547 114043 Hs.592163 NM_153204 C21orf90 - chromosome 21 open reading frame 90 ncRNA Atac153_MAPQ30_peak_6501 chr8 134382957 134382957 + 3.83555 NA Intergenic Intergenic -73410 NM_006096 10397 Hs.372914 NM_006096 HPRD:05586 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding Atac153_MAPQ30_peak_7134 chrX 98978817 98978817 + 3.83555 NA intron (NR_024608, intron 5 of 10) L1PA13|LINE|L1 216024 NR_024608 442459 Hs.706599 NM_001127438 XRCC6P5 - X-ray repair complementing defective repair in Chinese hamster cells 6 pseudogene 5 pseudo Atac153_MAPQ30_peak_6076 chr7 96118506 96118506 + 3.83555 NA intron (NM_001201450, intron 2 of 4) intron (NM_001201450, intron 2 of 4) 14329 NM_001201450 401388 Hs.734935 NM_207503 HPRD:16959 C7orf76 - chromosome 7 open reading frame 76 protein-coding Atac153_MAPQ30_peak_4844 chr3 133246333 133246333 + 3.83555 NA Intergenic Intergenic -46101 NM_001134422 55573 Hs.518265 NM_017548 HPRD:13627 CDV3 H41 CDV3 homolog (mouse) protein-coding Atac153_MAPQ30_peak_6928 chrX 17969574 17969574 + 3.83555 NA Intergenic LTR16A|LTR|ERVL -90117 NM_001172739 10742 Hs.446680 NM_021785 HPRD:02199 RAI2 - retinoic acid induced 2 protein-coding Atac153_MAPQ30_peak_465 chr1 195486916 195486916 + 3.83555 NA Intergenic MSTA|LTR|ERVL-MaLR 1064695 NR_039888 100616363 NR_039888 MIR4735 - microRNA 4735 ncRNA Atac153_MAPQ30_peak_2067 chr14 100916802 100916802 + 3.83555 NA intron (NM_001161476, intron 2 of 6) L2a|LINE|L2 73969 NM_024515 79446 Hs.497600 NM_024515 HPRD:14649 WDR25 C14orf67 WD repeat domain 25 protein-coding Atac153_MAPQ30_peak_6610 chr9 33472221 33472221 + 3.83555 NA exon (NM_022917, exon 2 of 26) exon (NM_022917, exon 2 of 26) 1720 NM_022917 65083 Hs.493709 NM_022917 HPRD:14832 NOL6 NRAP|UTP22|bA311H10.1 nucleolar protein 6 (RNA-associated) protein-coding Atac153_MAPQ30_peak_5974 chr7 39931586 39931586 + 3.83555 NA Intergenic LTR8|LTR|ERV1 -58373 NM_031267 8621 Hs.233552 NM_003718 HPRD:04496 CDK13 CDC2L|CDC2L5|CHED|hCDK13 cyclin-dependent kinase 13 protein-coding Atac153_MAPQ30_peak_3029 chr18 20722470 20722470 + 3.83555 NA intron (NM_001100619, intron 1 of 9) intron (NM_001100619, intron 1 of 9) 6743 NM_001100619 91768 Hs.11108 NM_138375 HPRD:16461 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding Atac153_MAPQ30_peak_1976 chr14 72424888 72424888 + 3.83555 NA intron (NM_001204420, intron 1 of 15) intron (NM_001204420, intron 1 of 15) 25102 NM_001204418 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP regulator of G-protein signaling 6 protein-coding Atac153_MAPQ30_peak_4171 chr20 55044113 55044113 + 3.83555 NA intron (NM_001283036, intron 1 of 8) MIRb|SINE|MIR 472 NM_016407 51507 Hs.517134 NM_016407 HPRD:12769 RTFDC1 C20orf43|CDAO5|HSPC164|SHUJUN-3 replication termination factor 2 domain containing 1 protein-coding Atac153_MAPQ30_peak_5393 chr5 131425594 131425594 + 3.83555 NA Intergenic HERV16-int|LTR|ERVL 16109 NM_000758 1437 Hs.1349 NM_000758 HPRD:00734 CSF2 GMCSF colony stimulating factor 2 (granulocyte-macrophage) protein-coding Atac153_MAPQ30_peak_4314 chr21 45360715 45360715 + 3.83555 NA intron (NM_001037553, intron 1 of 8) intron (NM_001037553, intron 1 of 8) 15436 NM_001037553 56894 Hs.248785 NM_020132 HPRD:10637 AGPAT3 LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding Atac153_MAPQ30_peak_7256 chrX 145046270 145046270 + 3.83555 NA Intergenic L1MA2|LINE|L1 28074 NR_106783 102466721 NR_106783 MIR892C hsa-mir-892c microRNA 892c ncRNA Atac153_MAPQ30_peak_524 chr1 213224102 213224102 + 3.83555 NA promoter-TSS (NM_001287218) promoter-TSS (NM_001287218) -473 NM_012424 26750 Hs.591416 NM_012424 HPRD:10204 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 protein-coding Atac153_MAPQ30_peak_6822 chr9 132076540 132076540 + 3.83555 NA Intergenic Intergenic -6755 NM_001012715 414318 Hs.449434 NM_001012715 C9orf106 bA65J3.5 chromosome 9 open reading frame 106 protein-coding Atac153_MAPQ30_peak_6769 chr9 117184529 117184529 + 3.83555 NA intron (NM_001083885, intron 7 of 11) intron (NM_001083885, intron 7 of 11) -27844 NM_030767 80709 Hs.494895 NM_030767 HPRD:16148 AKNA - AT-hook transcription factor protein-coding Atac153_MAPQ30_peak_1862 chr13 107087695 107087695 + 3.83555 NA Intergenic AluSx|SINE|Alu 58784 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA Atac153_MAPQ30_peak_3639 chr2 101299332 101299332 + 3.83555 NA Intergenic MIR3|SINE|MIR 119914 NM_024065 79031 Hs.469459 NM_024065 PDCL3 HTPHLP|PHLP2A|PHLP3|VIAF|VIAF1 phosducin-like 3 protein-coding Atac153_MAPQ30_peak_1551 chr12 62686808 62686808 + 3.83555 NA intron (NM_001252078, intron 1 of 21) L1PA15-16|LINE|L1 32668 NR_106740 102465133 NR_106740 MIR6125 hsa-mir-6125 microRNA 6125 ncRNA Atac153_MAPQ30_peak_3413 chr2 11672887 11672887 + 3.83555 NA Intergenic Intergenic -1355 NM_014668 9687 Hs.467733 NM_014668 HPRD:13611 GREB1 - growth regulation by estrogen in breast cancer 1 protein-coding Atac153_MAPQ30_peak_2205 chr15 67054363 67054363 + 3.83555 NA intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 53433 NM_001142861 4091 Hs.153863 NM_005585 HPRD:04240 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding Atac153_MAPQ30_peak_5740 chr6 99541719 99541719 + 3.83555 NA Intergenic Intergenic -145837 NR_103836 26235 Hs.536850 NM_012160 HPRD:05738 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine-rich repeat protein 4 protein-coding Atac153_MAPQ30_peak_6820 chr9 131843154 131843154 + 3.83555 NA promoter-TSS (NM_020438) promoter-TSS (NM_020438) -229 NM_001135917 57171 Hs.21701 NM_020438 HPRD:16835 DOLPP1 LSFR2 dolichyldiphosphatase 1 protein-coding Atac153_MAPQ30_peak_4585 chr3 14401443 14401443 + 3.83555 NA Intergenic Intergenic -7375 NR_110135 101927565 Hs.306905 NR_110135 ENSG00000251576 LINC01267 - long intergenic non-protein coding RNA 1267 ncRNA Atac153_MAPQ30_peak_2591 chr16 81832130 81832130 + 3.83555 NA intron (NM_002661, intron 2 of 32) intron (NM_002661, intron 2 of 32) 19267 NM_002661 5336 Hs.372303 NM_002661 HPRD:02570 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C, gamma 2 (phosphatidylinositol-specific) protein-coding Atac153_MAPQ30_peak_3388 chr2 3655913 3655913 + 3.83555 NA intron (NM_001255989, intron 1 of 3) intron (NM_001255989, intron 1 of 3) 2271 NM_001255989 78989 Hs.32603 NM_024027 HPRD:10847 COLEC11 3MC2|CL-K1-I|CL-K1-II|CL-K1-IIa|CL-K1-IIb|CLK1 collectin sub-family member 11 protein-coding Atac153_MAPQ30_peak_7170 chrX 115087531 115087531 + 3.83555 NA Intergenic L1MB7|LINE|L1 -214427 NM_000686 186 Hs.405348 NM_000686 HPRD:02071 AGTR2 AT2|ATGR2|MRX88 angiotensin II receptor, type 2 protein-coding Atac153_MAPQ30_peak_1422 chr12 1656106 1656106 + 3.83555 NA Intergenic Intergenic 46449 NR_028415 100292680 Hs.391695 NR_028415 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA Atac153_MAPQ30_peak_6025 chr7 56224884 56224884 + 3.83555 NA Intergenic Intergenic -40794 NM_001145712 389493 Hs.177948 NM_001145712 ENSG00000185290 NUPR1L - nuclear protein, transcriptional regulator, 1-like protein-coding Atac153_MAPQ30_peak_3967 chr20 864104 864104 + 3.83555 NA intron (NM_015985, intron 4 of 8) intron (NM_015985, intron 4 of 8) 32856 NM_015985 51378 Hs.278973 NM_015985 HPRD:04747 ANGPT4 AGP4|ANG-3|ANG4 angiopoietin 4 protein-coding Atac153_MAPQ30_peak_109 chr1 18278726 18278726 + 3.83555 NA Intergenic Intergenic -155514 NM_032880 84966 Hs.212511 NM_032880 HPRD:11309 IGSF21 - immunoglobin superfamily, member 21 protein-coding Atac153_MAPQ30_peak_6150 chr7 133590702 133590702 + 3.83555 NA intron (NM_021807, intron 12 of 17) intron (NM_021807, intron 12 of 17) -81061 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA Atac153_MAPQ30_peak_6397 chr8 64276480 64276480 + 3.83555 NA Intergenic L2b|LINE|L2 194918 NM_001277818 253943 Hs.491861 NM_152758 HPRD:08106 YTHDF3 - YTH domain family, member 3 protein-coding Atac153_MAPQ30_peak_6057 chr7 70907956 70907956 + 3.83555 NA intron (NM_022479, intron 5 of 10) intron (NM_022479, intron 5 of 10) -135200 NR_037477 100500836 NR_037477 miRBase:MI0016419 MIR3914-1 - microRNA 3914-1 ncRNA Atac153_MAPQ30_peak_1098 chr11 15271115 15271115 + 3.83555 NA Intergenic Intergenic 100467 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - inscuteable homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_6736 chr9 103582307 103582307 + 3.83555 NA Intergenic Intergenic -208724 NM_207299 54886 Hs.382683 NM_017753 HPRD:17906 LPPR1 PRG-3 lipid phosphate phosphatase-related protein type 1 protein-coding Atac153_MAPQ30_peak_5952 chr7 31045400 31045400 + 3.83555 NA Intergenic Intergenic 41764 NM_000823 2692 Hs.767 NM_000823 HPRD:00748 GHRHR GHRFR|GRFR|IGHD1B growth hormone releasing hormone receptor protein-coding Atac153_MAPQ30_peak_540 chr1 223562339 223562339 + 3.83555 NA Intergenic Intergenic -4376 NM_152610 164127 Hs.192090 NM_152610 HPRD:08761 CCDC185 C1orf65 coiled-coil domain containing 185 protein-coding Atac153_MAPQ30_peak_1326 chr11 114142952 114142952 + 3.83555 NA Intergenic Intergenic -23583 NM_006169 4837 Hs.503911 NM_006169 HPRD:02478 NNMT - nicotinamide N-methyltransferase protein-coding Atac153_MAPQ30_peak_5288 chr5 32667612 32667612 + 3.83555 NA Intergenic MER52-int|LTR|ERV1 -43131 NM_001204376 4883 Hs.13528 NM_000908 HPRD:00167 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding Atac153_MAPQ30_peak_1224 chr11 65058557 65058557 + 3.83555 NA intron (NM_002689, intron 13 of 17) intron (NM_002689, intron 13 of 17) -23732 NM_006779 10435 Hs.343380 NM_006779 HPRD:09363 CDC42EP2 BORG1|CEP2 CDC42 effector protein (Rho GTPase binding) 2 protein-coding Atac153_MAPQ30_peak_99 chr1 17040538 17040538 + 3.83555 NA intron (NR_026567, intron 1 of 10) AluSx|SINE|Alu 6114 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo Atac153_MAPQ30_peak_3775 chr2 157302991 157302991 + 3.83555 NA intron (NM_000408, intron 1 of 16) MLT1J2|LTR|ERVL-MaLR 10091 NM_000408 2820 Hs.512382 NM_000408 HPRD:00715 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 (mitochondrial) protein-coding Atac153_MAPQ30_peak_7169 chrX 114958150 114958150 + 3.83555 NA Intergenic AluJb|SINE|Alu 130331 NM_001282338 5358 Hs.496622 NM_005032 HPRD:02133 PLS3 BMND18|T-plastin plastin 3 protein-coding Atac153_MAPQ30_peak_4966 chr4 2819107 2819107 + 3.83555 NA promoter-TSS (NM_001145856) promoter-TSS (NM_001145856) -805 NM_001145856 6452 Hs.167679 NM_003023 HPRD:03657 SH3BP2 3BP-2|3BP2|CRBM|CRPM SH3-domain binding protein 2 protein-coding Atac153_MAPQ30_peak_2239 chr15 74160212 74160212 + 3.83555 NA Intergenic Intergenic -5715 NM_001286434 161514 Hs.124512 NM_153356 HPRD:15473 TBC1D21 MgcRabGAP TBC1 domain family, member 21 protein-coding Atac153_MAPQ30_peak_3290 chr19 36279735 36279735 + 3.83555 NA TTS (NM_052948) TTS (NM_052948) 9076 NR_104176 644050 Hs.651888 NR_104176 ENSG00000225872 LINC01529 - long intergenic non-protein coding RNA 1529 ncRNA Atac153_MAPQ30_peak_7030 chrX 50228793 50228793 + 3.83555 NA Intergenic L2b|LINE|L2 -15056 NM_001013742 139189 Hs.38132 NM_001013742 DGKK - diacylglycerol kinase, kappa protein-coding Atac153_MAPQ30_peak_5521 chr5 176268018 176268018 + 3.83555 NA intron (NM_133369, intron 1 of 14) intron (NM_133369, intron 1 of 14) 30458 NM_133369 90249 Hs.33191 NM_133369 ENSG00000113763 UNC5A UNC5H1 unc-5 homolog A (C. elegans) protein-coding Atac153_MAPQ30_peak_2756 chr17 21204452 21204452 + 3.83555 NA intron (NM_002756, intron 5 of 11) MIR|SINE|MIR 13104 NM_002756 5606 Hs.514012 NM_002756 HPRD:03816 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding Atac153_MAPQ30_peak_7001 chrX 40791690 40791690 + 3.83555 NA Intergenic Intergenic -99241 NR_027761 100132831 Hs.729923 NR_027761 LOC100132831 - A20-binding inhibitor of NF-kappaB activation 2 pseudogene pseudo Atac153_MAPQ30_peak_4851 chr3 134383387 134383387 + 3.83555 NA Intergenic Intergenic -13523 NM_178554 339855 Hs.146730 NM_178554 KY - kyphoscoliosis peptidase protein-coding Atac153_MAPQ30_peak_6147 chr7 132236799 132236799 + 3.83555 NA intron (NM_181775, intron 2 of 4) intron (NM_181775, intron 2 of 4) 24524 NM_020911 91584 Hs.511454 NM_020911 HPRD:10901 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding Atac153_MAPQ30_peak_3923 chr2 236898560 236898560 + 3.83555 NA intron (NM_001037131, intron 13 of 17) intron (NM_001037131, intron 13 of 17) 178092 NM_001485 2637 Hs.184945 NM_001485 HPRD:03087 GBX2 - gastrulation brain homeobox 2 protein-coding Atac153_MAPQ30_peak_4307 chr21 44274422 44274422 + 3.83555 NA intron (NR_048535, intron 8 of 10) intron (NR_048535, intron 8 of 10) 24963 NM_001260477 10785 Hs.248815 NM_018669 HPRD:09330 WDR4 TRM82|TRMT82 WD repeat domain 4 protein-coding Atac153_MAPQ30_peak_2545 chr16 68278982 68278982 + 3.83555 NA promoter-TSS (NM_012320) promoter-TSS (NM_012320) -265 NM_012320 23659 Hs.632199 NM_012320 HPRD:07128 PLA2G15 ACS|GXVPLA2|LLPL|LPLA2|LYPLA3 phospholipase A2, group XV protein-coding Atac153_MAPQ30_peak_492 chr1 204226412 204226412 + 3.83555 NA intron (NM_014935, intron 9 of 22) intron (NM_014935, intron 9 of 22) -43192 NM_198447 127845 Hs.532401 NM_198447 HPRD:13465 GOLT1A CGI-141|GOT1|HMFN1187|YMR292W golgi transport 1A protein-coding Atac153_MAPQ30_peak_264 chr1 53999989 53999989 + 3.83555 NA intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 74917 NM_033067 63948 Hs.131654 NM_033067 HPRD:16828 DMRTB1 - DMRT-like family B with proline-rich C-terminal, 1 protein-coding Atac153_MAPQ30_peak_2693 chr17 8973667 8973667 + 3.83555 NA intron (NM_004822, intron 2 of 6) intron (NM_004822, intron 2 of 6) 48808 NM_004822 9423 Hs.660885 NM_004822 HPRD:03368 NTN1 NTN1L netrin 1 protein-coding Atac153_MAPQ30_peak_4858 chr3 136046599 136046599 + 3.83555 NA intron (NM_000532, intron 13 of 14) intron (NM_000532, intron 13 of 14) 77432 NM_001178014 5096 Hs.63788 NM_000532 HPRD:01982 PCCB - propionyl CoA carboxylase, beta polypeptide protein-coding Atac153_MAPQ30_peak_6872 chr9 140781175 140781175 + 3.83555 NA intron (NR_121583, intron 1 of 3) intron (NR_121583, intron 1 of 3) 5847 NR_121583 100133077 Hs.640081 NR_121583 ENSG00000203987 LOC100133077 - uncharacterized LOC100133077 ncRNA Atac153_MAPQ30_peak_5656 chr6 36534494 36534494 + 3.83555 NA Intergenic MIR|SINE|MIR -19247 NM_007271 11329 Hs.409578 NM_007271 HPRD:09511 STK38 NDR|NDR1 serine/threonine kinase 38 protein-coding Atac153_MAPQ30_peak_795 chr10 73131701 73131701 + 3.83555 NA Intergenic Intergenic -24990 NM_001171931 64072 Hs.656032 NM_022124 HPRD:05699 CDH23 CDHR23|USH1D cadherin-related 23 protein-coding Atac153_MAPQ30_peak_6329 chr8 27416206 27416206 + 3.83555 NA Intergenic Intergenic 52062 NR_106902 102465508 NR_106902 MIR6843 hsa-mir-6843 microRNA 6843 ncRNA Atac153_MAPQ30_peak_5055 chr4 28738675 28738675 + 3.83555 NA Intergenic AluJo|SINE|Alu -82529 NR_036237 100422937 NR_036237 MIR4275 - microRNA 4275 ncRNA Atac153_MAPQ30_peak_4891 chr3 149901520 149901520 + 3.83555 NA Intergenic L2a|LINE|L2 -54786 NR_110168 101927992 Hs.534682 NR_110167 ENSG00000244541 LINC01213 - long intergenic non-protein coding RNA 1213 ncRNA Atac153_MAPQ30_peak_6192 chr7 150666058 150666058 + 3.83555 NA intron (NM_000238, intron 2 of 14) intron (NM_000238, intron 2 of 14) 9344 NM_172056 3757 Hs.647099 NM_000238 HPRD:01069 KCNH2 ERG1|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel, subfamily H (eag-related), member 2 protein-coding Atac153_MAPQ30_peak_4111 chr20 41869531 41869531 + 3.83555 NA Intergenic LTR16A1|LTR|ERVL -50974 NM_133170 11122 Hs.526879 NM_007050 HPRD:06690 PTPRT RPTPrho protein tyrosine phosphatase, receptor type, T protein-coding Atac153_MAPQ30_peak_1753 chr13 20936880 20936880 + 3.83555 NA Intergenic Intergenic 71105 NR_039721 100616304 NR_039721 MIR4499 - microRNA 4499 ncRNA Atac153_MAPQ30_peak_63 chr1 9964906 9964906 + 3.83555 NA intron (NM_020248, intron 1 of 5) intron (NM_020248, intron 1 of 5) 5410 NM_020248 56998 Hs.463759 NM_020248 HPRD:09677 CTNNBIP1 ICAT catenin, beta interacting protein 1 protein-coding Atac153_MAPQ30_peak_383 chr1 154528052 154528052 + 3.83555 NA intron (NM_017582, intron 2 of 12) intron (NM_017582, intron 2 of 12) 3068 NM_017582 55585 Hs.607928 NM_017582 HPRD:15601 UBE2Q1 GTAP|NICE-5|UBE2Q ubiquitin-conjugating enzyme E2Q family member 1 protein-coding Atac153_MAPQ30_peak_5632 chr6 31033584 31033584 + 3.83555 NA Intergenic L2c|LINE|L2 12357 NR_003948 285834 Hs.207528 NR_003948 ENSG00000228789 HCG22 PBMUCL2 HLA complex group 22 ncRNA Atac153_MAPQ30_peak_5667 chr6 39786977 39786977 + 3.83555 NA intron (NM_015345, intron 1 of 24) intron (NM_015345, intron 1 of 24) 26204 NM_015345 23500 Hs.357128 NM_015345 HPRD:09434 DAAM2 dJ90A20A.1 dishevelled associated activator of morphogenesis 2 protein-coding Atac153_MAPQ30_peak_5405 chr5 133408149 133408149 + 3.83555 NA Intergenic Intergenic -42253 NM_003202 6932 Hs.573153 NM_003202 HPRD:01797 TCF7 TCF-1 transcription factor 7 (T-cell specific, HMG-box) protein-coding Atac153_MAPQ30_peak_1004 chr10 131821487 131821487 + 3.83555 NA Intergenic Intergenic -59396 NM_001005463 253738 Hs.591374 NM_001005463 HPRD:16818 EBF3 COE3|EBF-3|O/E-2|OE-2 early B-cell factor 3 protein-coding Atac153_MAPQ30_peak_638 chr10 2378185 2378185 + 3.83555 NA Intergenic MLT1A1|LTR|ERVL-MaLR -20917 NR_038884 399708 Hs.521270 NR_038884 LINC00701 - long intergenic non-protein coding RNA 701 ncRNA Atac153_MAPQ30_peak_338 chr1 114660478 114660478 + 3.83555 NA intron (NM_001270805, intron 3 of 7) MIR3|SINE|MIR 34584 NM_205848 148281 Hs.370963 NM_205848 HPRD:09654 SYT6 sytVI synaptotagmin VI protein-coding Atac153_MAPQ30_peak_4244 chr21 32820643 32820643 + 3.83555 NA intron (NM_003253, intron 2 of 28) AluSz6|SINE|Alu 110647 NM_003253 7074 Hs.517228 NM_003253 HPRD:02820 TIAM1 - T-cell lymphoma invasion and metastasis 1 protein-coding Atac153_MAPQ30_peak_1259 chr11 72257490 72257490 + 3.83555 NA Intergenic Intergenic 68684 NR_029603 406931 NR_029603 MIR139 MIR139-3p|MIRN139 microRNA 139 ncRNA Atac153_MAPQ30_peak_5622 chr6 27447393 27447393 + 3.83555 NA Intergenic Intergenic -6496 NM_007149 7738 Hs.158174 NM_007149 HPRD:03785 ZNF184 - zinc finger protein 184 protein-coding Atac153_MAPQ30_peak_5266 chr5 12412580 12412580 + 3.83555 NA Intergenic L1MA2|LINE|L1 -162389 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA Atac153_MAPQ30_peak_5572 chr6 5685706 5685706 + 3.83555 NA intron (NR_110842, intron 2 of 3) intron (NR_110842, intron 2 of 3) 9799 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA Atac153_MAPQ30_peak_102 chr1 17253188 17253188 + 3.83555 NA intron (NM_014675, intron 3 of 36) intron (NM_014675, intron 3 of 36) 4743 NM_014675 9696 Hs.309403 NM_014675 HPRD:16758 CROCC ROLT ciliary rootlet coiled-coil, rootletin protein-coding Atac153_MAPQ30_peak_7082 chrX 68280271 68280271 + 3.83555 NA Intergenic Intergenic 105094 NM_145119 64219 Hs.522679 NM_022368 HPRD:02335 PJA1 PRAJA1|RNF70 praja ring finger 1, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_6378 chr8 52886222 52886222 + 3.83555 NA Intergenic L1M4c|LINE|L1 -74476 NM_001286783 115294 Hs.671268 NM_052937 HPRD:08313 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding Atac153_MAPQ30_peak_5607 chr6 18592260 18592260 + 3.83555 NA Intergenic MIRb|SINE|MIR 20245 NR_030312 693125 NR_030312 miRBase:MI0003593 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA Atac153_MAPQ30_peak_723 chr10 43541581 43541581 + 3.83555 NA Intergenic Intergenic -30936 NM_020630 5979 Hs.350321 NM_000323 HPRD:01266 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1|RET51 ret proto-oncogene protein-coding Atac153_MAPQ30_peak_4820 chr3 126715743 126715743 + 3.83555 NA intron (NM_032242, intron 2 of 30) intron (NM_032242, intron 2 of 30) 8306 NM_032242 5361 Hs.432329 NM_032242 HPRD:11868 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding Atac153_MAPQ30_peak_5808 chr6 148776541 148776541 + 3.83555 NA intron (NM_015278, intron 4 of 19) intron (NM_015278, intron 4 of 19) 112812 NM_015278 23328 Hs.193133 NM_015278 HPRD:06408 SASH1 SH3D6A|dJ323M4|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding Atac153_MAPQ30_peak_1183 chr11 46920850 46920850 + 3.83555 NA intron (NM_002334, intron 5 of 37) intron (NM_002334, intron 5 of 37) 19323 NM_002334 4038 Hs.4930 NM_002334 HPRD:18517 LRP4 CLSS|LRP-4|LRP10|MEGF7|SOST2 low density lipoprotein receptor-related protein 4 protein-coding Atac153_MAPQ30_peak_3624 chr2 95978253 95978253 + 3.83555 NA intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) 15181 NM_013434 30818 Hs.437376 NM_013434 HPRD:05232 KCNIP3 CSEN|DREAM|KCHIP3 Kv channel interacting protein 3, calsenilin protein-coding Atac153_MAPQ30_peak_5649 chr6 35179425 35179425 + 3.83555 NA Intergenic Intergenic -2765 NM_152753 222663 Hs.12923 NM_152753 HPRD:18031 SCUBE3 CEGF3 signal peptide, CUB domain, EGF-like 3 protein-coding Atac153_MAPQ30_peak_1885 chr13 113983008 113983008 + 3.83555 NA intron (NM_001286732, intron 5 of 6) AluJb|SINE|Alu -22980 NR_046541 100874068 Hs.661837 NR_046541 GRTP1-AS1 - GRTP1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6924 chrX 17639112 17639112 + 3.83555 NA intron (NM_001291867, intron 1 of 8) intron (NM_001291867, intron 1 of 8) -14301 NM_001291868 4810 Hs.201623 NM_198270 HPRD:02351 NHS CTRCT40|CXN|SCML1 Nance-Horan syndrome (congenital cataracts and dental anomalies) protein-coding Atac153_MAPQ30_peak_5533 chr5 177941543 177941543 + 3.83555 NA intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) 76013 NM_173465 91522 Hs.660026 NM_173465 HPRD:16733 COL23A1 - collagen, type XXIII, alpha 1 protein-coding Atac153_MAPQ30_peak_7230 chrX 136169844 136169844 + 3.83555 NA Intergenic Intergenic -56011 NM_054021 83550 Hs.350569 NM_054021 HPRD:02315 GPR101 GPCR6 G protein-coupled receptor 101 protein-coding Atac153_MAPQ30_peak_4529 chr3 3019781 3019781 + 3.83555 NA intron (NM_001206956, intron 4 of 15) MLT1C|LTR|ERVL-MaLR 83048 NR_046554 100873975 Hs.581502 NR_046554 CNTN4-AS1 - CNTN4 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_19 chr1 3212631 3212631 + 3.83555 NA intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -158516 NM_014448 27237 Hs.87435 NM_014448 HPRD:12478 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor (GEF) 16 protein-coding Atac153_MAPQ30_peak_680 chr10 17604745 17604745 + 3.83555 NA Intergenic Intergenic 54628 NM_014241 9200 Hs.114062 NM_014241 HPRD:10175 PTPLA CAP|HACD1 protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A protein-coding Atac153_MAPQ30_peak_7011 chrX 46614661 46614661 + 3.83555 NA intron (NM_001257291, intron 1 of 16) intron (NM_001257291, intron 1 of 16) 3946 NM_032591 84679 Hs.91389 NM_032591 SLC9A7 NHE-7|NHE7|SLC9A6 solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 protein-coding Atac153_MAPQ30_peak_6266 chr8 6663543 6663543 + 3.83555 NA Intergenic Intergenic -29533 NR_045217 100652791 Hs.369771 NR_045217 ENSG00000245857 GS1-24F4.2 - uncharacterized LOC100652791 ncRNA Atac153_MAPQ30_peak_4600 chr3 25878690 25878690 + 3.83555 NA Intergenic L1MA9|LINE|L1 36496 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA Atac153_MAPQ30_peak_2965 chr17 79494542 79494542 + 3.83555 NA promoter-TSS (NM_012418) promoter-TSS (NM_012418) -875 NM_001077182 25794 Hs.118555 NM_012418 HPRD:06366 FSCN2 RFSN|RP30 fascin actin-bundling protein 2, retinal protein-coding Atac153_MAPQ30_peak_6725 chr9 100222938 100222938 + 3.83555 NA exon (NM_014290, exon 7 of 17) exon (NM_014290, exon 7 of 17) -40524 NM_001166116 7111 Hs.404289 NM_003275 HPRD:01838 TMOD1 D9S57E|ETMOD|TMOD tropomodulin 1 protein-coding Atac153_MAPQ30_peak_4213 chr20 61678423 61678423 + 3.83555 NA intron (NR_033369, intron 1 of 5) intron (NR_033369, intron 1 of 5) 9060 NR_033369 100144597 Hs.636485 NR_033369 ENSG00000237119 LINC01056 - long intergenic non-protein coding RNA 1056 ncRNA Atac153_MAPQ30_peak_4198 chr20 59136788 59136788 + 3.83555 NA Intergenic Intergenic 83619 NR_039758 100616362 NR_039758 miRBase:MI0016900 MIR4533 - microRNA 4533 ncRNA Atac153_MAPQ30_peak_2200 chr15 66386207 66386207 + 3.83555 NA intron (NM_032445, intron 5 of 22) intron (NM_032445, intron 5 of 22) 53636 NR_036196 100422905 NR_036196 miRBase:MI0015841 MIR4311 - microRNA 4311 ncRNA Atac153_MAPQ30_peak_3872 chr2 219508636 219508636 + 3.83555 NA exon (NM_001105537, exon 8 of 10) exon (NM_001105537, exon 8 of 10) 15627 NM_001105537 7701 Hs.657969 NM_005081 HPRD:04967 ZNF142 pHZ-49 zinc finger protein 142 protein-coding Atac153_MAPQ30_peak_6908 chrX 10362008 10362008 + 3.83555 NA Intergenic Intergenic 173635 NM_001193279 4281 Hs.27695 NM_000381 HPRD:02047 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding Atac153_MAPQ30_peak_6624 chr9 37905454 37905454 + 3.83555 NA Intergenic Intergenic -1104 NR_024873 92014 Hs.634120 NM_033412 HPRD:14370 SLC25A51 CG7943|MCART1 solute carrier family 25, member 51 protein-coding Atac153_MAPQ30_peak_622 chr1 246663689 246663689 + 3.83555 NA intron (NM_001167740, intron 1 of 11) ERVL-E-int|LTR|ERVL 6955 NM_001167740 64754 Hs.567571 NM_022743 HPRD:12297 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding Atac153_MAPQ30_peak_2358 chr16 2358418 2358418 + 3.83555 NA intron (NM_001089, intron 11 of 32) intron (NM_001089, intron 11 of 32) 32329 NM_001089 21 Hs.26630 NM_001089 HPRD:03369 ABCA3 ABC-C|ABC3|EST111653|LBM180|SMDP3 ATP-binding cassette, sub-family A (ABC1), member 3 protein-coding Atac153_MAPQ30_peak_6861 chr9 139058459 139058459 + 3.83555 NA Intergenic AluJr4|SINE|Alu 36545 NM_014564 8022 Hs.148427 NM_014564 HPRD:02783 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding Atac153_MAPQ30_peak_2188 chr15 62994164 62994164 + 3.83555 NA intron (NM_015059, intron 14 of 55) intron (NM_015059, intron 14 of 55) 54654 NM_015059 83660 Hs.569438 NM_015059 HPRD:09555 TLN2 ILWEQ talin 2 protein-coding Atac153_MAPQ30_peak_3332 chr19 49014314 49014314 + 3.83555 NA intron (NM_001080434, intron 2 of 15) intron (NM_001080434, intron 2 of 15) 2132 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding Atac153_MAPQ30_peak_3838 chr2 206520518 206520518 + 3.83555 NA Intergenic MIR3|SINE|MIR -26706 NM_201266 8828 Hs.471200 NM_003872 HPRD:03643 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding Atac153_MAPQ30_peak_1819 chr13 52318095 52318095 + 3.83555 NA intron (NM_052950, intron 7 of 11) intron (NM_052950, intron 7 of 11) 60203 NM_001031719 79758 Hs.266728 NM_024705 HPRD:07833 DHRS12 SDR40C1 dehydrogenase/reductase (SDR family) member 12 protein-coding Atac153_MAPQ30_peak_5833 chr6 161582033 161582033 + 3.83555 NA non-coding (NR_024277, exon 1 of 1) non-coding (NR_024277, exon 1 of 1) 981 NR_024277 79992 Hs.664873 NM_024929 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4741 chr3 66161472 66161472 + 3.83555 NA intron (NM_173471, intron 1 of 10) MLT2B4|LTR|ERVL 42187 NM_173471 115286 Hs.379386 NM_173471 HPRD:15357 SLC25A26 SAMC solute carrier family 25 (S-adenosylmethionine carrier), member 26 protein-coding Atac153_MAPQ30_peak_814 chr10 79637747 79637747 + 3.83555 NA intron (NM_004747, intron 1 of 31) intron (NM_004747, intron 1 of 31) 48601 NM_004747 9231 Hs.652690 NM_004747 HPRD:04972 DLG5 LP-DLG|P-DLG5|PDLG discs, large homolog 5 (Drosophila) protein-coding Atac153_MAPQ30_peak_4683 chr3 50455203 50455203 + 3.83555 NA intron (NM_001005505, intron 3 of 37) L2b|LINE|L2 52438 NR_111914 11068 Hs.149443 NM_007022 HPRD:06143 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family, member D2 protein-coding Atac153_MAPQ30_peak_6915 chrX 14942449 14942449 + 3.83555 NA Intergenic MSTA|LTR|ERVL-MaLR 39036 NM_001177475 158747 Hs.744919 NM_152581 HPRD:06642 MOSPD2 - motile sperm domain containing 2 protein-coding Atac153_MAPQ30_peak_6188 chr7 149474105 149474105 + 3.83555 NA exon (NM_198455, exon 3 of 110) exon (NM_198455, exon 3 of 110) 974 NM_198455 23145 Hs.632022 NM_198455 SSPO - SCO-spondin protein-coding Atac153_MAPQ30_peak_6887 chrX 2811426 2811426 + 3.83555 NA Intergenic MSTA|LTR|ERVL-MaLR 35990 NM_001669 414 Hs.528631 NM_001669 HPRD:02048 ARSD ASD arylsulfatase D protein-coding Atac153_MAPQ30_peak_2786 chr17 27372059 27372059 + 3.83555 NA intron (NM_016518, intron 2 of 7) intron (NM_016518, intron 2 of 7) 2141 NM_016518 51268 Hs.462585 NM_016518 HPRD:17853 PIPOX LPIPOX pipecolic acid oxidase protein-coding Atac153_MAPQ30_peak_745 chr10 47129247 47129247 + 3.83555 NA intron (NR_033957, intron 1 of 3) LTR71B|LTR|ERV1 4589 NR_003277 728643 Hs.711067 NR_003277 ENSG00000213412 HNRNPA1P33 - heterogeneous nuclear ribonucleoprotein A1 pseudogene 33 pseudo Atac153_MAPQ30_peak_1519 chr12 52568903 52568903 + 3.83555 NA intron (NM_182507, intron 4 of 8) L1MC5|LINE|L1 16881 NM_182507 144501 Hs.140978 NM_182507 HPRD:14068 KRT80 KB20 keratin 80 protein-coding Atac153_MAPQ30_peak_2285 chr15 81517031 81517031 + 3.83555 NA promoter-TSS (NM_172217) promoter-TSS (NM_172217) -609 NM_172217 3603 Hs.459095 NM_004513 HPRD:04329 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding Atac153_MAPQ30_peak_3083 chr18 45306979 45306979 + 3.83555 NA Intergenic MLT1G1|LTR|ERVL-MaLR 149991 NM_005901 4087 Hs.12253 NM_005901 HPRD:03221 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding Atac153_MAPQ30_peak_4886 chr3 141652772 141652772 + 3.83555 NA Intergenic Intergenic 57302 NM_001679 483 Hs.477789 NM_001679 HPRD:03521 ATP1B3 ATPB-3|CD298 ATPase, Na+/K+ transporting, beta 3 polypeptide protein-coding Atac153_MAPQ30_peak_3617 chr2 91816418 91816418 + 3.83555 NA Intergenic L2a|LINE|L2 31557 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_7075 chrX 67901576 67901576 + 3.83555 NA intron (NM_014725, intron 2 of 13) intron (NM_014725, intron 2 of 13) -11906 NM_001142504 9754 Hs.95140 NM_014725 HPRD:06730 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR-related lipid transfer (START) domain containing 8 protein-coding Atac153_MAPQ30_peak_1844 chr13 95908504 95908504 + 3.83555 NA intron (NM_001105515, intron 1 of 20) intron (NM_001105515, intron 1 of 20) 45183 NM_001105515 10257 Hs.508423 NM_005845 HPRD:05583 ABCC4 EST170205|MOAT-B|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding Atac153_MAPQ30_peak_3915 chr2 235513395 235513395 + 3.83555 NA Intergenic Intergenic -107698 NM_001282431 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding Atac153_MAPQ30_peak_2475 chr16 30130923 30130923 + 3.83555 NA intron (NM_001109891, intron 2 of 7) MIRb|SINE|MIR 3707 NM_001040056 5595 Hs.861 NM_002746 HPRD:03479 MAPK3 ERK-1|ERK1|ERT2|HS44KDAP|HUMKER1A|P44ERK1|P44MAPK|PRKM3|p44-ERK1|p44-MAPK mitogen-activated protein kinase 3 protein-coding Atac153_MAPQ30_peak_4397 chr22 30744583 30744583 + 3.83555 NA intron (NM_001005409, intron 2 of 15) intron (NM_001005409, intron 2 of 15) -8044 NM_001017437 550631 Hs.505597 NM_001017437 HPRD:18686 CCDC157 - coiled-coil domain containing 157 protein-coding Atac153_MAPQ30_peak_4440 chr22 38487036 38487036 + 3.83555 NA intron (NM_025045, intron 7 of 13) intron (NM_025045, intron 7 of 13) -7866 NM_013356 23539 Hs.745256 NM_013356 HPRD:11568 SLC16A8 MCT3|REMP solute carrier family 16 (monocarboxylate transporter), member 8 protein-coding Atac153_MAPQ30_peak_6761 chr9 116671342 116671342 + 3.83555 NA intron (NM_133374, intron 1 of 13) MIR3|SINE|MIR 32780 NM_133374 114991 Hs.349208 NM_133374 HPRD:18719 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding Atac153_MAPQ30_peak_2034 chr14 93801738 93801738 + 3.83555 NA intron (NM_020818, intron 1 of 49) L2c|LINE|L2 2173 NM_020818 57578 Hs.126561 NM_020818 HPRD:11143 UNC79 KIAA1409 unc-79 homolog (C. elegans) protein-coding Atac153_MAPQ30_peak_2785 chr17 27334652 27334652 + 3.83555 NA Intergenic Intergenic -1194 NM_001290202 124925 Hs.21837 NM_178860 HPRD:18041 SEZ6 - seizure related 6 homolog (mouse) protein-coding Atac153_MAPQ30_peak_6840 chr9 136720392 136720392 + 3.83555 NA intron (NM_003371, intron 3 of 26) intron (NM_003371, intron 3 of 26) -115315 NM_007101 1757 Hs.198003 NM_007101 HPRD:06831 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding Atac153_MAPQ30_peak_6831 chr9 134781618 134781618 + 3.83555 NA intron (NM_004269, intron 4 of 7) L2a|LINE|L2 -168693 NM_005312 2889 Hs.127897 NM_005312 HPRD:02627 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding Atac153_MAPQ30_peak_3270 chr19 31165033 31165033 + 3.83555 NA Intergenic Intergenic 301705 NM_014717 9745 Hs.378901 NM_014717 HPRD:15825 ZNF536 - zinc finger protein 536 protein-coding Atac153_MAPQ30_peak_1156 chr11 43811315 43811315 + 3.83555 NA intron (NM_016142, intron 3 of 10) AluJb|SINE|Alu -91042 NM_139178 221120 Hs.720708 NM_139178 HPRD:16793 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1 alkB, alkylation repair homolog 3 (E. coli) protein-coding Atac153_MAPQ30_peak_5073 chr4 49033113 49033113 + 3.83555 NA intron (NM_001286791, intron 11 of 15) intron (NM_001286791, intron 11 of 15) 44454 NM_001286791 80157 Hs.479703 NM_025087 HPRD:08638 CWH43 CWH43-C cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_6929 chrX 18030484 18030484 + 3.83555 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -151027 NM_001172739 10742 Hs.446680 NM_021785 HPRD:02199 RAI2 - retinoic acid induced 2 protein-coding Atac153_MAPQ30_peak_4016 chr20 19298863 19298863 + 3.83555 NA intron (NM_020689, intron 2 of 16) LTR16C|LTR|ERVL -33623 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA Atac153_MAPQ30_peak_2424 chr16 18026079 18026079 + 3.83555 NA Intergenic Intergenic 400440 NM_001282511 101059953 Hs.636569 NM_001282511 NPIPA8 LCR16a9 nuclear pore complex interacting protein family, member A8 protein-coding Atac153_MAPQ30_peak_3912 chr2 235056959 235056959 + 3.83555 NA Intergenic Intergenic 97613 NM_006944 6694 Hs.444488 NM_006944 HPRD:04029 SPP2 SPP-24|SPP24 secreted phosphoprotein 2, 24kDa protein-coding Atac153_MAPQ30_peak_306 chr1 94223000 94223000 + 3.83555 NA intron (NM_001261408, intron 2 of 13) intron (NM_001261408, intron 2 of 13) -75606 NM_003567 8412 Hs.36958 NM_003567 HPRD:05268 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding Atac153_MAPQ30_peak_3220 chr19 11075988 11075988 + 3.83555 NA intron (NM_003072, intron 1 of 34) MIR|SINE|MIR 4180 NM_001128849 6597 Hs.327527 NM_003072 HPRD:04459 SMARCA4 BAF190|BAF190A|BRG1|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding Atac153_MAPQ30_peak_658 chr10 7661095 7661095 + 3.83555 NA intron (NM_001001851, intron 5 of 11) intron (NM_001001851, intron 5 of 11) 541 NM_032817 80760 Hs.498586 NM_030569 HPRD:07865 ITIH5 ITI-HC5 inter-alpha-trypsin inhibitor heavy chain family, member 5 protein-coding Atac153_MAPQ30_peak_3868 chr2 218170314 218170314 + 3.83555 NA intron (NR_026597, intron 12 of 12) intron (NR_026597, intron 12 of 12) -445532 NM_003284 7141 Hs.3017 NM_003284 HPRD:01830 TNP1 TP1 transition protein 1 (during histone to protamine replacement) protein-coding Atac153_MAPQ30_peak_6003 chr7 50778635 50778635 + 3.83555 NA intron (NM_001001555, intron 2 of 16) L3|LINE|CR1 -5637 NM_001001550 2887 Hs.164060 NM_005311 HPRD:03312 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor-bound protein 10 protein-coding Atac153_MAPQ30_peak_5280 chr5 16785461 16785461 + 3.83555 NA intron (NM_012334, intron 4 of 40) intron (NM_012334, intron 4 of 40) 150924 NM_012334 4651 Hs.481720 NM_012334 HPRD:03283 MYO10 - myosin X protein-coding Atac153_MAPQ30_peak_2497 chr16 49388812 49388812 + 3.83555 NA Intergenic Intergenic -18996 NM_144602 123970 Hs.125875 NM_144602 HPRD:14560 C16orf78 - chromosome 16 open reading frame 78 protein-coding Atac153_MAPQ30_peak_258 chr1 50887372 50887372 + 3.83555 NA intron (NM_032110, intron 1 of 2) CpG-1102 1747 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT-like family A2 protein-coding Atac153_MAPQ30_peak_4076 chr20 34147604 34147604 + 3.83555 NA intron (NR_119376, intron 41 of 43) intron (NR_119376, intron 41 of 43) 17826 NM_015966 51614 Hs.472558 NM_015966 HPRD:15306 ERGIC3 C20orf47|CGI-54|Erv46|NY-BR-84|PRO0989|SDBCAG84|dJ477O4.2 ERGIC and golgi 3 protein-coding Atac153_MAPQ30_peak_2443 chr16 24017290 24017290 + 3.83555 NA intron (NM_212535, intron 3 of 16) intron (NM_212535, intron 3 of 16) 169990 NM_212535 5579 Hs.460355 NM_002738 HPRD:01499 PRKCB PKC-beta|PKCB|PRKCB1|PRKCB2 protein kinase C, beta protein-coding Atac153_MAPQ30_peak_6167 chr7 138564796 138564796 + 3.83555 NA intron (NM_001164665, intron 11 of 19) intron (NM_001164665, intron 11 of 19) -81855 NM_130840 50617 Hs.98967 NM_020632 HPRD:05576 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase, H+ transporting, lysosomal V0 subunit a4 protein-coding Atac153_MAPQ30_peak_662 chr10 10808899 10808899 + 3.83555 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 27978 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1, pseudogene pseudo Atac153_MAPQ30_peak_4586 chr3 14495119 14495119 + 3.83555 NA intron (NR_103507, intron 5 of 13) L2a|LINE|L2 51043 NM_001134368 6533 Hs.529488 NM_003043 HPRD:01734 SLC6A6 TAUT solute carrier family 6 (neurotransmitter transporter), member 6 protein-coding Atac153_MAPQ30_peak_1391 chr11 130191525 130191525 + 3.83555 NA Intergenic Intergenic -6918 NM_001301098 29068 Hs.721470 NM_014155 HPRD:13692 ZBTB44 BTBD15|HSPC063|ZNF851 zinc finger and BTB domain containing 44 protein-coding Atac153_MAPQ30_peak_2564 chr16 71467226 71467226 + 3.83555 NA Intergenic Intergenic 28891 NM_145911 7571 Hs.656643 NM_145911 HPRD:01915 ZNF23 KOX16|ZNF359|ZNF612|Zfp612 zinc finger protein 23 protein-coding Atac153_MAPQ30_peak_5915 chr7 11034042 11034042 + 3.83555 NA intron (NR_033435, intron 3 of 15) AluSx3|SINE|Alu 20543 NR_033435 9678 Hs.655688 NM_014660 HPRD:17845 PHF14 - PHD finger protein 14 protein-coding Atac153_MAPQ30_peak_6535 chr8 141400978 141400978 + 3.83555 NA intron (NM_031466, intron 7 of 22) intron (NM_031466, intron 7 of 22) 66883 NM_001160372 83696 Hs.654911 NM_031466 HPRD:18136 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|TRS120 trafficking protein particle complex 9 protein-coding Atac153_MAPQ30_peak_1950 chr14 65144498 65144498 + 3.83555 NA Intergenic L2c|LINE|L2 -26695 NM_015549 26030 Hs.509637 NM_015549 HPRD:17861 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding Atac153_MAPQ30_peak_5385 chr5 124022335 124022335 + 3.83555 NA intron (NM_020747, intron 2 of 8) intron (NM_020747, intron 2 of 8) 58470 NM_020747 57507 Hs.266616 NM_020747 HPRD:18357 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding Atac153_MAPQ30_peak_4690 chr3 51317501 51317501 + 3.83555 NA intron (NM_004947, intron 26 of 52) intron (NM_004947, intron 26 of 52) -105167 NM_006010 7873 Hs.436446 NM_006010 HPRD:03558 MANF ARMET|ARP mesencephalic astrocyte-derived neurotrophic factor protein-coding Atac153_MAPQ30_peak_3869 chr2 218474422 218474422 + 3.83555 NA intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 146894 NR_026597 729582 Hs.572788 NR_026597 ENSG00000231672 DIRC3 - disrupted in renal carcinoma 3 ncRNA Atac153_MAPQ30_peak_3203 chr19 5565391 5565391 + 3.83555 NA intron (NR_027064, intron 1 of 2) L2b|LINE|L2 2614 NR_027064 257000 Hs.515575 NM_153375 HPRD:17859 TINCR LINC00036|NCRNA00036|PLAC2 tissue differentiation-inducing non-protein coding RNA ncRNA Atac153_MAPQ30_peak_3544 chr2 59394660 59394660 + 3.83555 NA Intergenic Intergenic -50183 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LOC101927285 - uncharacterized LOC101927285 ncRNA Atac153_MAPQ30_peak_1066 chr11 7802449 7802449 + 3.83555 NA Intergenic L1PA10|LINE|L1 16040 NM_153444 120065 Hs.351824 NM_153444 HPRD:17769 OR5P2 JCG3|JCG4 olfactory receptor, family 5, subfamily P, member 2 protein-coding Atac153_MAPQ30_peak_2568 chr16 74058003 74058003 + 3.83555 NA Intergenic Intergenic 191417 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA Atac153_MAPQ30_peak_309 chr1 101596429 101596429 + 3.83555 NA Intergenic L2c|LINE|L2 105027 NR_109849 102606465 Hs.593669 NR_109849 LOC102606465 - uncharterized LOC102606465 ncRNA Atac153_MAPQ30_peak_1954 chr14 65238200 65238200 + 3.83555 NA intron (NM_001024858, intron 25 of 34) MIR|SINE|MIR 14204 NR_107009 102465841 NR_107009 MIR7855 hsa-mir-7855 microRNA 7855 ncRNA Atac153_MAPQ30_peak_3532 chr2 47452741 47452741 + 3.83555 NA intron (NR_110207, intron 1 of 2) intron (NR_110207, intron 1 of 2) -49001 NM_001743 805 Hs.468442 NM_001743 HPRD:00242 CALM2 CAMII|PHKD|PHKD2 calmodulin 2 (phosphorylase kinase, delta) protein-coding Atac153_MAPQ30_peak_2694 chr17 9020597 9020597 + 3.83555 NA intron (NM_004822, intron 2 of 6) intron (NM_004822, intron 2 of 6) 61838 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA Atac153_MAPQ30_peak_4077 chr20 34257916 34257916 + 3.83555 NA intron (NR_037570, intron 13 of 13) intron (NR_037570, intron 13 of 13) -5038 NM_152928 8904 Hs.246413 NM_003915 HPRD:05014 CPNE1 COPN1|CPN1 copine I protein-coding Atac153_MAPQ30_peak_21 chr1 4029107 4029107 + 3.83555 NA Intergenic LTR16E2|LTR|ERVL 28435 NR_040065 728716 Hs.668359 NR_040065 LINC01346 - long intergenic non-protein coding RNA 1346 ncRNA Atac153_MAPQ30_peak_6652 chr9 82171589 82171589 + 3.83555 NA Intergenic Intergenic -15099 NM_001282753 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|ESG|ESG4|GRG4 transducin-like enhancer of split 4 protein-coding Atac153_MAPQ30_peak_6500 chr8 134364020 134364020 + 3.83555 NA Intergenic L2b|LINE|L2 -54473 NM_006096 10397 Hs.372914 NM_006096 HPRD:05586 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding Atac153_MAPQ30_peak_7217 chrX 132048798 132048798 + 3.83555 NA intron (NM_001077188, intron 3 of 5) intron (NM_001077188, intron 3 of 5) 46625 NM_001077188 90161 Hs.385956 NM_147175 HPRD:06590 HS6ST2 - heparan sulfate 6-O-sulfotransferase 2 protein-coding Atac153_MAPQ30_peak_1637 chr12 110725672 110725672 + 3.83555 NA intron (NM_170665, intron 3 of 19) AluSx|SINE|Alu 6640 NM_170665 488 Hs.506759 NM_001681 HPRD:00161 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 protein-coding Atac153_MAPQ30_peak_5030 chr4 12089225 12089225 + 3.83555 NA Intergenic Intergenic -658688 NM_005114 9957 Hs.507348 NM_005114 HS3ST1 3OST|3OST1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein-coding Atac153_MAPQ30_peak_3644 chr2 102165789 102165789 + 3.83555 NA Intergenic L1ME1|LINE|L1 -74624 NM_001145664 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding Atac153_MAPQ30_peak_7137 chrX 102234964 102234964 + 3.83555 NA Intergenic Intergenic 42764 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A, member RAS oncogene family-like protein-coding Atac153_MAPQ30_peak_2986 chr18 4107176 4107176 + 3.83555 NA intron (NM_001242761, intron 2 of 11) intron (NM_001242761, intron 2 of 11) 144823 NR_102696 101410534 Hs.141055 NR_102696 ENSG00000263878 DLGAP1-AS4 - DLGAP1 antisense RNA 4 ncRNA Atac153_MAPQ30_peak_2669 chr17 4145791 4145791 + 3.83555 NA intron (NR_047571, intron 1 of 23) intron (NR_047571, intron 1 of 23) 21351 NM_001257999 51479 Hs.696087 NM_016376 HPRD:09717 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding Atac153_MAPQ30_peak_964 chr10 126394497 126394497 + 3.83555 NA intron (NR_120631, intron 1 of 1) intron (NR_120631, intron 1 of 1) 1900 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1616 chr12 108004171 108004171 + 3.83555 NA intron (NM_001018072, intron 5 of 16) intron (NM_001018072, intron 5 of 16) 29537 NM_001017523 121551 Hs.271272 NM_152322 HPRD:12536 BTBD11 ABTB2B BTB (POZ) domain containing 11 protein-coding Atac153_MAPQ30_peak_6221 chr7 156932614 156932614 + 3.83555 NA intron (NM_014671, intron 1 of 22) intron (NM_014671, intron 1 of 22) 959 NM_014671 9690 Hs.118351 NM_014671 HPRD:15604 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding Atac153_MAPQ30_peak_579 chr1 230532509 230532509 + 3.83555 NA intron (NM_001258311, intron 1 of 6) MIRc|SINE|MIR 29165 NM_001258311 79605 Hs.520463 NM_024554 HPRD:10148 PGBD5 - piggyBac transposable element derived 5 protein-coding Atac153_MAPQ30_peak_2529 chr16 58537269 58537269 + 3.83555 NA intron (NM_001242833, intron 2 of 14) intron (NM_001242833, intron 2 of 14) 3222 NM_001242836 65009 Hs.322430 NM_020465 HPRD:14817 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding Atac153_MAPQ30_peak_2895 chr17 63205345 63205345 + 3.83555 NA intron (NM_001165933, intron 16 of 16) intron (NM_001165933, intron 16 of 16) 71889 NM_001081955 8787 Hs.664380 NM_003835 HPRD:04962 RGS9 PERRS|RGS9L regulator of G-protein signaling 9 protein-coding Atac153_MAPQ30_peak_7245 chrX 140926269 140926269 + 3.83555 NA intron (NM_138702, intron 1 of 7) intron (NM_138702, intron 1 of 7) 167 NM_138702 139081 Hs.356870 NM_138702 HPRD:06629 MAGEC3 CT7.2|HCA2|MAGE-C3|MAGEC4 melanoma antigen family C, 3 protein-coding Atac153_MAPQ30_peak_1832 chr13 79289822 79289822 + 3.83555 NA Intergenic L2c|LINE|L2 -56508 NM_024546 79596 Hs.567576 NM_024546 HPRD:12619 RNF219 C13orf7 ring finger protein 219 protein-coding Atac153_MAPQ30_peak_1794 chr13 36370882 36370882 + 3.83555 NA intron (NM_004734, intron 15 of 17) intron (NM_004734, intron 15 of 17) 59116 NM_001195416 9201 Hs.507755 NM_004734 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin-like kinase 1 protein-coding Atac153_MAPQ30_peak_1299 chr11 97386434 97386434 + 3.83555 NA Intergenic PRIMA4-int|LTR|ERV1 104461 NR_107016 102465857 NR_107016 MIR7976 hsa-mir-7976 microRNA 7976 ncRNA Atac153_MAPQ30_peak_3890 chr2 228093936 228093936 + 3.83555 NA intron (NR_102371, intron 10 of 13) intron (NR_102371, intron 10 of 13) 64655 NM_000091 1285 Hs.570065 NM_000091 HPRD:00354 COL4A3 - collagen, type IV, alpha 3 (Goodpasture antigen) protein-coding Atac153_MAPQ30_peak_548 chr1 224956045 224956045 + 3.83555 NA Intergenic Intergenic 151866 NM_152495 149111 Hs.731723 NM_152495 HPRD:08799 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding Atac153_MAPQ30_peak_184 chr1 34420189 34420189 + 3.83555 NA intron (NM_052896, intron 3 of 69) L1MB3|LINE|L1 85632 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2385 chr16 9629770 9629770 + 3.83555 NA Intergenic Intergenic 28478 NR_106988 102465753 NR_106988 MIR7641-2 B-ATF|hsa-mir-7641-2 microRNA 7641-2 ncRNA Atac153_MAPQ30_peak_877 chr10 102334068 102334068 + 3.83555 NA Intergenic MLT1L|LTR|ERVL-MaLR 38427 NM_017902 55662 Hs.500788 NM_017902 HIF1AN FIH1 hypoxia inducible factor 1, alpha subunit inhibitor protein-coding Atac153_MAPQ30_peak_6395 chr8 62026286 62026286 + 3.83555 NA Intergenic Intergenic -145979 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA Atac153_MAPQ30_peak_3122 chr18 57283886 57283886 + 3.83555 NA intron (NM_133459, intron 2 of 10) intron (NM_133459, intron 2 of 10) 80758 NM_133459 147372 Hs.34333 NM_133459 HPRD:08703 CCBE1 - collagen and calcium binding EGF domains 1 protein-coding Atac153_MAPQ30_peak_1613 chr12 106238962 106238962 + 3.83555 NA Intergenic MLT1K|LTR|ERVL-MaLR 138410 NR_110111 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility candidate 18 (non-protein coding) ncRNA Atac153_MAPQ30_peak_3345 chr19 52957382 52957382 + 3.83555 NA intron (NM_001099694, intron 1 of 5) intron (NM_001099694, intron 1 of 5) 553 NM_001099694 147660 Hs.157287 NM_152472 HPRD:15857 ZNF578 - zinc finger protein 578 protein-coding Atac153_MAPQ30_peak_4144 chr20 48116759 48116759 + 3.83555 NA Intergenic L2a|LINE|L2 -17578 NM_004975 3745 Hs.84244 NM_004975 KCNB1 DRK1|KV2.1|h-DRK1 potassium voltage-gated channel, Shab-related subfamily, member 1 protein-coding Atac153_MAPQ30_peak_2068 chr14 101116129 101116129 + 3.83555 NA Intergenic MSTD|LTR|ERVL-MaLR -7476 NR_024096 283601 Hs.379802 NM_001007560 HPRD:16621 LINC00523 C14orf70 long intergenic non-protein coding RNA 523 ncRNA Atac153_MAPQ30_peak_1317 chr11 113033878 113033878 + 3.83555 NA intron (NM_181351, intron 2 of 19) intron (NM_181351, intron 2 of 19) 110745 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA Atac153_MAPQ30_peak_4233 chr21 11181784 11181784 + 3.83555 NA Intergenic Intergenic -82847 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding Atac153_MAPQ30_peak_1509 chr12 49394061 49394061 + 3.83555 NA promoter-TSS (NM_015086) promoter-TSS (NM_015086) -973 NM_015086 23109 Hs.591044 NM_015086 HPRD:10294 DDN - dendrin protein-coding Atac153_MAPQ30_peak_2199 chr15 65713331 65713331 + 3.83555 NA intron (NM_020962, intron 1 of 19) L2b|LINE|L2 2079 NM_020962 57722 Hs.458607 NM_020962 HPRD:11399 IGDCC4 DDM36|NOPE immunoglobulin superfamily, DCC subclass, member 4 protein-coding Atac153_MAPQ30_peak_4268 chr21 38166810 38166810 + 3.83555 NA intron (NM_001242785, intron 7 of 11) L2a|LINE|L2 94819 NM_009586 6493 Hs.146186 NM_005069 HPRD:02935 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 single-minded family bHLH transcription factor 2 protein-coding Atac153_MAPQ30_peak_4555 chr3 10677927 10677927 + 3.83555 NA Intergenic Intergenic -9435 NR_046766 100874325 Hs.143004 NR_046766 ATP2B2-IT2 - ATP2B2 intronic transcript 2 (non-protein coding) ncRNA Atac153_MAPQ30_peak_2799 chr17 32548929 32548929 + 3.83555 NA Intergenic Intergenic -33367 NM_002982 6347 Hs.303649 NM_002982 HPRD:01149 CCL2 GDCF-2|HC11|HSMCR30|MCAF|MCP-1|MCP1|SCYA2|SMC-CF chemokine (C-C motif) ligand 2 protein-coding Atac153_MAPQ30_peak_1194 chr11 57700851 57700851 + 3.83555 NA Intergenic Intergenic -90502 NM_001005212 219956 Hs.689841 NM_001005212 HPRD:17800 OR9Q1 - olfactory receptor, family 9, subfamily Q, member 1 protein-coding Atac153_MAPQ30_peak_3177 chr19 1220909 1220909 + 3.83555 NA intron (NM_000455, intron 5 of 9) intron (NM_000455, intron 5 of 9) 15111 NM_000455 6794 Hs.515005 NM_000455 HPRD:03740 STK11 LKB1|PJS|hLKB1 serine/threonine kinase 11 protein-coding Atac153_MAPQ30_peak_4273 chr21 39130793 39130793 + 3.83555 NA intron (NM_002240, intron 2 of 3) MER63A|DNA|hAT-Blackjack 157948 NM_002240 3763 Hs.626242 NM_002240 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|hiGIRK2 potassium inwardly-rectifying channel, subfamily J, member 6 protein-coding Atac153_MAPQ30_peak_2081 chr14 102971223 102971223 + 3.83555 NA Intergenic Intergenic 4905 NM_152326 122416 Hs.432945 NM_152326 HPRD:12467 ANKRD9 - ankyrin repeat domain 9 protein-coding Atac153_MAPQ30_peak_7295 chrX 155036755 155036755 + 3.83555 NA Intergenic LTR40b|LTR|ERVL 39304 NM_005840 10251 Hs.381912 NM_005840 HPRD:03917 SPRY3 HSPRY3|spry-3 sprouty homolog 3 (Drosophila) protein-coding Atac153_MAPQ30_peak_6412 chr8 84120794 84120794 + 3.83555 NA Intergenic MER52D|LTR|ERV1 -195199 NR_122034 103352670 Hs.399852 NR_122034 LINC01419 TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA Atac153_MAPQ30_peak_3550 chr2 62404707 62404707 + 3.83555 NA Intergenic Intergenic -18555 NM_006577 10678 Hs.173203 NM_006577 HPRD:09279 B3GNT2 B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding Atac153_MAPQ30_peak_4127 chr20 44539602 44539602 + 3.83555 NA promoter-TSS (NM_001242921) promoter-TSS (NM_001242921) 31 NM_001242921 5360 Hs.439312 NM_006227 HPRD:01399 PLTP BPIFE|HDLCQ9 phospholipid transfer protein protein-coding Atac153_MAPQ30_peak_2133 chr15 40602754 40602754 + 3.83555 NA Intergenic Intergenic -2580 NM_004573 5330 Hs.355888 NM_004573 HPRD:04985 PLCB2 PLC-beta-2 phospholipase C, beta 2 protein-coding Atac153_MAPQ30_peak_2493 chr16 47992978 47992978 + 3.83555 NA Intergenic AluJo|SINE|Alu -71937 NR_110649 100507534 Hs.407601 NR_110649 ENSG00000261325 LOC100507534 - uncharacterized LOC100507534 ncRNA Atac153_MAPQ30_peak_1056 chr11 6383937 6383937 + 3.83555 NA Intergenic Intergenic -27707 NM_001007593 6609 Hs.498173 NM_000543 HPRD:06353 SMPD1 ASM|ASMASE|NPD sphingomyelin phosphodiesterase 1, acid lysosomal protein-coding Atac153_MAPQ30_peak_5715 chr6 73738721 73738721 + 3.83555 NA intron (NM_001160133, intron 2 of 14) intron (NM_001160133, intron 2 of 14) -61245 NR_036244 100423005 NR_036244 miRBase:MI0015890 MIR4282 - microRNA 4282 ncRNA Atac153_MAPQ30_peak_3690 chr2 121304171 121304171 + 3.83555 NA Intergenic Intergenic -80246 NR_027181 84931 Hs.334519 NM_032845 HPRD:08604 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA Atac153_MAPQ30_peak_5248 chr5 7783071 7783071 + 3.83555 NA intron (NM_020546, intron 18 of 24) intron (NM_020546, intron 18 of 24) 68532 NM_001089584 134121 Hs.709979 NM_001089584 ENSG00000215217 C5orf49 - chromosome 5 open reading frame 49 protein-coding Atac153_MAPQ30_peak_6625 chr9 37944822 37944822 + 3.83555 NA intron (NM_003028, intron 5 of 5) L2b|LINE|L2 -40472 NR_024873 92014 Hs.634120 NM_033412 HPRD:14370 SLC25A51 CG7943|MCART1 solute carrier family 25, member 51 protein-coding Atac153_MAPQ30_peak_6337 chr8 36021101 36021101 + 3.83555 NA Intergenic Intergenic -620741 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium channel, subfamily U, member 1 protein-coding Atac153_MAPQ30_peak_1572 chr12 83799558 83799558 + 3.83555 NA Intergenic Intergenic 718624 NM_152588 160335 Hs.577775 NM_152588 HPRD:13230 TMTC2 IBDBP1 transmembrane and tetratricopeptide repeat containing 2 protein-coding Atac153_MAPQ30_peak_4685 chr3 50510529 50510529 + 3.83555 NA intron (NM_001005505, intron 2 of 37) intron (NM_001005505, intron 2 of 37) 30499 NM_001174051 9254 Hs.476273 NM_006030 HPRD:06154 CACNA2D2 CACNA2D calcium channel, voltage-dependent, alpha 2/delta subunit 2 protein-coding Atac153_MAPQ30_peak_6660 chr9 84369960 84369960 + 3.83555 NA intron (NR_109772, intron 3 of 3) intron (NR_109772, intron 3 of 3) 65332 NR_109772 101927502 Hs.528628 NR_109772 ENSG00000233926 LOC101927502 - uncharacterized LOC101927502 ncRNA Atac153_MAPQ30_peak_6594 chr9 16519624 16519624 + 3.83555 NA intron (NM_017637, intron 5 of 6) intron (NM_017637, intron 5 of 6) -243313 NR_073471 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding Atac153_MAPQ30_peak_1669 chr12 118369559 118369559 + 3.83555 NA intron (NM_173598, intron 1 of 19) intron (NM_173598, intron 1 of 19) 36469 NM_173598 283455 Hs.375836 NM_173598 HPRD:13952 KSR2 - kinase suppressor of ras 2 protein-coding Atac153_MAPQ30_peak_6844 chr9 137020599 137020599 + 3.83555 NA intron (NM_052821, intron 10 of 12) intron (NM_052821, intron 10 of 12) 9087 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA Atac153_MAPQ30_peak_4024 chr20 21162578 21162578 + 3.83555 NA intron (NM_018474, intron 6 of 12) MLT1L|LTR|ERVL-MaLR 36349 NR_109956 101929591 Hs.656066 NR_109956 ENSG00000232712 KIZ-AS1 - KIZ antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2966 chr17 79523966 79523966 + 3.83555 NA TTS (NM_017921) TTS (NM_017921) -4537 NM_025161 80233 Hs.313905 NM_025161 HPRD:07982 C17orf70 FAAP100 chromosome 17 open reading frame 70 protein-coding Atac153_MAPQ30_peak_2565 chr16 71864126 71864126 + 3.83555 NA Intergenic AluSz6|SINE|Alu -15768 NM_001137675 342371 Hs.743239 NM_001137675 ENSG00000224470 ATXN1L BOAT|BOAT1 ataxin 1-like protein-coding Atac153_MAPQ30_peak_4953 chr4 596758 596758 + 3.83555 NA Intergenic Intergenic -22605 NM_000283 5158 Hs.623810 NM_000283 HPRD:01571 PDE6B CSNB3|CSNBAD2|PDEB|RP40|rd1 phosphodiesterase 6B, cGMP-specific, rod, beta protein-coding Atac153_MAPQ30_peak_4133 chr20 45645036 45645036 + 3.83555 NA intron (NM_005244, intron 5 of 15) L2a|LINE|L2 121773 NM_172110 2139 Hs.472877 NM_005244 HPRD:09041 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding Atac153_MAPQ30_peak_4286 chr21 40860272 40860272 + 3.83555 NA intron (NM_001001713, intron 3 of 6) intron (NM_001001713, intron 3 of 6) 36492 NM_007341 6450 Hs.473847 NM_007341 HPRD:03753 SH3BGR 21-GARP SH3 domain binding glutamate-rich protein protein-coding Atac153_MAPQ30_peak_3949 chr2 240101589 240101589 + 3.83555 NA intron (NM_006037, intron 4 of 26) CpG 15564 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA Atac153_MAPQ30_peak_131 chr1 21913388 21913388 + 3.83555 NA Intergenic MIR|SINE|MIR 64960 NM_001145658 5909 Hs.148178 NM_002885 HPRD:02609 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding Atac153_MAPQ30_peak_3486 chr2 30912362 30912362 + 3.83555 NA Intergenic Intergenic 117949 NM_144575 92291 Hs.660911 NM_144575 HPRD:07008 CAPN13 - calpain 13 protein-coding Atac153_MAPQ30_peak_3410 chr2 10756049 10756049 + 3.83555 NA intron (NR_048552, intron 12 of 19) HAL1|LINE|L1 74064 NM_024894 79954 Hs.222494 NM_024894 HPRD:07849 NOL10 PQBP5 nucleolar protein 10 protein-coding Atac153_MAPQ30_peak_2447 chr16 25363988 25363988 + 3.83555 NA Intergenic MamGypLTR1a|LTR|Gypsy -95133 NM_001012981 342357 Hs.513451 NM_001012981 HPRD:11268 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding Atac153_MAPQ30_peak_1823 chr13 58155854 58155854 + 3.83555 NA Intergenic L1PB2|LINE|L1 -49935 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding Atac153_MAPQ30_peak_3887 chr2 225022232 225022232 + 3.83555 NA Intergenic L2a|LINE|L2 -118196 NM_006216 5270 Hs.38449 NM_006216 HPRD:01510 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 protein-coding Atac153_MAPQ30_peak_1039 chr11 1856684 1856684 + 3.83555 NA exon (NM_138567, exon 3 of 9) exon (NM_138567, exon 3 of 9) 1144 NM_001290332 90019 Hs.161031 NM_138567 HPRD:09655 SYT8 - synaptotagmin VIII protein-coding Atac153_MAPQ30_peak_3042 chr18 31983632 31983632 + 3.83555 NA Intergenic Intergenic -89622 NM_032979 1837 Hs.643454 NM_001390 HPRD:03141 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin, alpha protein-coding Atac153_MAPQ30_peak_2750 chr17 19787187 19787187 + 3.83555 NA Intergenic Intergenic -15948 NM_001142610 9706 Hs.168762 NM_014683 HPRD:10556 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding Atac153_MAPQ30_peak_5888 chr7 1779318 1779318 + 3.83555 NA intron (NR_120508, intron 1 of 1) intron (NR_120508, intron 1 of 1) 2628 NR_120509 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6800 chr9 127055156 127055156 + 3.83555 NA 5' UTR (NM_001145001, exon 2 of 11) 5' UTR (NM_001145001, exon 2 of 11) 457 NM_001166169 10783 Hs.197071 NM_014397 HPRD:05348 NEK6 SID6-1512 NIMA-related kinase 6 protein-coding Atac153_MAPQ30_peak_642 chr10 3455458 3455458 + 3.83555 NA Intergenic AluJr|SINE|Alu -240425 NM_001242307 10531 Hs.528300 NM_014889 HPRD:07142 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding Atac153_MAPQ30_peak_4092 chr20 37503669 37503669 + 3.83555 NA intron (NM_015568, intron 2 of 10) intron (NM_015568, intron 2 of 10) -51286 NM_030919 81610 Hs.726442 NM_030919 HPRD:12744 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83, member D protein-coding Atac153_MAPQ30_peak_6674 chr9 88127199 88127199 + 3.83555 NA Intergenic Intergenic 229745 NM_001286715 23287 Hs.719980 NM_015239 HPRD:08442 AGTPBP1 CCP1|NNA1 ATP/GTP binding protein 1 protein-coding Atac153_MAPQ30_peak_3338 chr19 50326543 50326543 + 3.83555 NA intron (NM_030973, intron 3 of 17) intron (NM_030973, intron 3 of 17) 5007 NM_030973 81857 Hs.656639 NM_030973 HPRD:14380 MED25 ACID1|ARC92|CMT2B2|P78|PTOV2 mediator complex subunit 25 protein-coding Atac153_MAPQ30_peak_3014 chr18 10569507 10569507 + 3.83555 NA Intergenic MLT1C|LTR|ERVL-MaLR 43634 NM_003826 8774 Hs.464622 NM_003826 HPRD:04448 NAPG GAMMASNAP N-ethylmaleimide-sensitive factor attachment protein, gamma protein-coding Atac153_MAPQ30_peak_6166 chr7 138429124 138429124 + 3.83555 NA intron (NM_130840, intron 13 of 20) AluSz|SINE|Alu 29658 NM_130841 50617 Hs.98967 NM_020632 HPRD:05576 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase, H+ transporting, lysosomal V0 subunit a4 protein-coding Atac153_MAPQ30_peak_6514 chr8 138626863 138626863 + 3.83555 NA Intergenic MSTA|LTR|ERVL-MaLR -201032 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA Atac153_MAPQ30_peak_674 chr10 14698477 14698477 + 3.83555 NA intron (NM_001282695, intron 2 of 5) intron (NM_001282695, intron 2 of 5) -52060 NM_001282696 83641 Hs.446315 NM_031453 HPRD:12575 FAM107B C10orf45 family with sequence similarity 107, member B protein-coding Atac153_MAPQ30_peak_339 chr1 115756826 115756826 + 3.83555 NA Intergenic Intergenic 124031 NM_002506 4803 Hs.2561 NM_002506 HPRD:08874 NGF Beta-NGF|HSAN5|NGFB nerve growth factor (beta polypeptide) protein-coding Atac153_MAPQ30_peak_5906 chr7 4296187 4296187 + 3.83555 NA intron (NM_152744, intron 44 of 44) intron (NM_152744, intron 44 of 44) 126870 NM_001079653 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_7063 chrX 63637539 63637539 + 3.83555 NA Intergenic L1PA14|LINE|L1 -22206 NM_017677 55613 Hs.442892 NM_017677 HPRD:06664 MTMR8 - myotubularin related protein 8 protein-coding Atac153_MAPQ30_peak_3248 chr19 19391446 19391446 + 3.83555 NA intron (NM_172231, intron 8 of 13) intron (NM_172231, intron 8 of 13) -7372 NM_001001524 53345 Hs.531624 NM_203510 HPRD:12109 TM6SF2 - transmembrane 6 superfamily member 2 protein-coding Atac153_MAPQ30_peak_1346 chr11 118250470 118250470 + 3.83555 NA intron (NM_001204077, intron 11 of 19) intron (NM_001204077, intron 11 of 19) 20174 NM_004788 9354 Hs.75275 NM_004788 HPRD:06793 UBE4A E4|UBOX2|UFD2 ubiquitination factor E4A protein-coding Atac153_MAPQ30_peak_7226 chrX 135718148 135718148 + 3.83555 NA Intergenic Intergenic -3554 NR_038462 100128420 Hs.152595 NR_038461 ENSG00000233093 LINC00892 - long intergenic non-protein coding RNA 892 ncRNA Atac153_MAPQ30_peak_1538 chr12 56814448 56814448 + 3.83555 NA exon (NM_003920, exon 26 of 29) exon (NM_003920, exon 26 of 29) 28752 NM_003920 8914 Hs.118631 NM_003920 HPRD:04864 TIMELESS TIM|TIM1|hTIM timeless circadian clock protein-coding Atac153_MAPQ30_peak_1411 chr11 134182826 134182826 + 3.83555 NA intron (NM_001080407, intron 15 of 19) intron (NM_001080407, intron 15 of 19) -18942 NM_138342 89944 Hs.436178 NM_138342 HPRD:14265 GLB1L2 MST114|MSTP114 galactosidase, beta 1-like 2 protein-coding Atac153_MAPQ30_peak_6010 chr7 51096672 51096672 + 3.83555 NA exon (NM_015198, exon 10 of 13) exon (NM_015198, exon 10 of 13) -235513 NM_001001555 2887 Hs.164060 NM_005311 HPRD:03312 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor-bound protein 10 protein-coding Atac153_MAPQ30_peak_4011 chr20 17641646 17641646 + 3.83555 NA intron (NM_004587, intron 1 of 24) MER102c|DNA|hAT-Charlie 21282 NM_004587 6238 Hs.472213 NM_004587 HPRD:11796 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding Atac153_MAPQ30_peak_69 chr1 11698643 11698643 + 3.83555 NA Intergenic Intergenic -15789 NM_183412 93611 Hs.556006 NM_033182 HPRD:16445 FBXO44 FBG3|FBX30|FBX6A|Fbx44|Fbxo6a F-box protein 44 protein-coding Atac153_MAPQ30_peak_7248 chrX 142327279 142327279 + 3.83555 NA Intergenic Intergenic 213575 NM_001009613 441525 Hs.535082 NM_001009613 HPRD:18093 SPANXN4 CT11.9 SPANX family, member N4 protein-coding Atac153_MAPQ30_peak_6646 chr9 80371439 80371439 + 3.83555 NA intron (NM_002072, intron 5 of 6) MLT1J2|LTR|ERVL-MaLR -108207 NM_004297 9630 Hs.657795 NM_004297 HPRD:05095 GNA14 - guanine nucleotide binding protein (G protein), alpha 14 protein-coding Atac153_MAPQ30_peak_6061 chr7 73384496 73384496 + 3.83555 NA Intergenic Intergenic -57623 NM_001278914 2006 Hs.647061 NM_000501 HPRD:00556 ELN SVAS|WBS|WS elastin protein-coding Atac153_MAPQ30_peak_5566 chr6 4516499 4516499 + 3.83555 NA Intergenic MIR|SINE|MIR -94300 NR_122107 497048 Hs.591355 NM_001011540 KU-MEL-3 - uncharacterized LOC497048 ncRNA Atac153_MAPQ30_peak_649 chr10 5534039 5534039 + 3.83555 NA Intergenic MIR|SINE|MIR 7494 NM_017422 51806 Hs.180142 NM_017422 HPRD:05538 CALML5 CLSP calmodulin-like 5 protein-coding Atac153_MAPQ30_peak_115 chr1 19127052 19127052 + 3.83555 NA Intergenic Intergenic 59103 NM_152232 80834 Hs.553548 NM_152232 HPRD:06940 TAS1R2 GPR71|T1R2|TR2 taste receptor, type 1, member 2 protein-coding Atac153_MAPQ30_peak_2220 chr15 69360218 69360218 + 3.83555 NA intron (NR_031680, intron 3 of 4) intron (NR_031680, intron 3 of 4) -12972 NR_026949 283673 Hs.177927 NM_173610 HPRD:08746 LINC00277 NCRNA00277|TMEM84 long intergenic non-protein coding RNA 277 ncRNA Atac153_MAPQ30_peak_5003 chr4 7397000 7397000 + 3.83555 NA intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 39700 NM_001085382 768239 Hs.662523 NM_001085382 ENSG00000178597 PSAPL1 - prosaposin-like 1 (gene/pseudogene) protein-coding Atac153_MAPQ30_peak_7258 chrX 146154467 146154467 + 3.83555 NA Intergenic Intergenic 157894 NR_030233 574511 NR_030233 miRBase:MI0003193 MIR506 MIRN506|hsa-mir-506 microRNA 506 ncRNA Atac153_MAPQ30_peak_6503 chr8 134781195 134781195 + 3.83555 NA Intergenic MIRb|SINE|MIR 8400 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA Atac153_MAPQ30_peak_6361 chr8 42075639 42075639 + 3.83555 NA Intergenic Intergenic -10445 NM_000930 5327 Hs.491582 NM_000930 HPRD:01419 PLAT T-PA|TPA plasminogen activator, tissue protein-coding Atac153_MAPQ30_peak_2708 chr17 10773360 10773360 + 3.83555 NA Intergenic MamRep605|Unknown|Unknown -31942 NM_001101387 644139 Hs.553909 NM_001101387 ENSG00000233670 PIRT - phosphoinositide-interacting regulator of transient receptor potential channels protein-coding Atac153_MAPQ30_peak_5621 chr6 27264332 27264332 + 3.83555 NA Intergenic Intergenic 15679 NM_033482 94026 Hs.729955 NM_033482 ENSG00000158553 POM121L2 POM121-L|POM121L POM121 transmembrane nucleoporin-like 2 protein-coding Atac153_MAPQ30_peak_1332 chr11 115942504 115942504 + 3.83555 NA Intergenic L2c|LINE|L2 -311586 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA Atac153_MAPQ30_peak_4725 chr3 58585172 58585172 + 3.83555 NA intron (NM_001282714, intron 1 of 4) L1ME3C|LINE|L1 -12332 NM_001282713 11170 Hs.506357 NM_007177 HPRD:09753 FAM107A DRR1|TU3A family with sequence similarity 107, member A protein-coding Atac153_MAPQ30_peak_4565 chr3 11966599 11966599 + 3.83555 NA Intergenic Intergenic -78206 NM_001284401 132001 Hs.475472 NM_138807 HPRD:14452 TAMM41 C3orf31|RAM41|TAM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5812 chr6 151017475 151017475 + 3.83555 NA intron (NM_001029884, intron 2 of 16) intron (NM_001029884, intron 2 of 16) 96476 NM_001029884 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 protein-coding Atac153_MAPQ30_peak_4411 chr22 33303307 33303307 + 3.83555 NA intron (NM_003490, intron 3 of 12) MIR|SINE|MIR 99499 NM_133633 8224 Hs.608750 NM_003490 HPRD:04083 SYN3 - synapsin III protein-coding Atac153_MAPQ30_peak_6731 chr9 101974080 101974080 + 3.83555 NA Intergenic L1MA4A|LINE|L1 10166 NM_033087 85365 Hs.40919 NM_033087 ALG2 CDGIi|NET38|hALPG2 ALG2, alpha-1,3/1,6-mannosyltransferase protein-coding Atac153_MAPQ30_peak_3218 chr19 10748992 10748992 + 3.83555 NA intron (NM_020428, intron 20 of 21) intron (NM_020428, intron 20 of 21) 12821 NM_020428 57153 Hs.534560 NM_020428 HPRD:16198 SLC44A2 CTL2|PP1292 solute carrier family 44 (choline transporter), member 2 protein-coding Atac153_MAPQ30_peak_3243 chr19 17028713 17028713 + 3.83555 NA intron (NM_015692, intron 27 of 41) MER2B|DNA|TcMar-Tigger 28887 NM_003950 9002 Hs.137574 NM_003950 F2RL3 PAR4 coagulation factor II (thrombin) receptor-like 3 protein-coding Atac153_MAPQ30_peak_4801 chr3 120274507 120274507 + 3.83555 NA Intergenic Intergenic -40621 NM_004547 4710 Hs.304613 NM_004547 HPRD:11955 NDUFB4 B15|CI-B15 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa protein-coding Atac153_MAPQ30_peak_508 chr1 206729740 206729740 + 3.83555 NA promoter-TSS (NM_182665) promoter-TSS (NM_182665) -752 NM_182665 83593 Hs.497579 NM_031437 HPRD:06117 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association (RalGDS/AF-6) domain family member 5 protein-coding Atac153_MAPQ30_peak_263 chr1 53970940 53970940 + 3.83555 NA TTS (NM_147193) TTS (NM_147193) 45868 NM_033067 63948 Hs.131654 NM_033067 HPRD:16828 DMRTB1 - DMRT-like family B with proline-rich C-terminal, 1 protein-coding Atac153_MAPQ30_peak_1958 chr14 67925124 67925124 + 3.83555 NA Intergenic L2a|LINE|L2 -46296 NM_016445 26499 Hs.170473 NM_016445 HPRD:12151 PLEK2 - pleckstrin 2 protein-coding Atac153_MAPQ30_peak_949 chr10 125110658 125110658 + 3.83555 NA Intergenic Intergenic 196898 NM_004725 9184 Hs.418533 NM_004725 HPRD:04761 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding Atac153_MAPQ30_peak_599 chr1 235127708 235127708 + 3.83555 NA Intergenic L2b|LINE|L2 163544 NR_002956 677802 Hs.744743 NR_002956 SNORA14B ACA14b small nucleolar RNA, H/ACA box 14B snoRNA Atac153_MAPQ30_peak_2854 chr17 47567917 47567917 + 3.83555 NA Intergenic Intergenic -4738 NM_002507 4804 Hs.415768 NM_002507 HPRD:01197 NGFR CD271|Gp80-LNGFR|TNFRSF16|p75(NTR)|p75NTR nerve growth factor receptor protein-coding Atac153_MAPQ30_peak_5309 chr5 55955750 55955750 + 3.83555 NA Intergenic Intergenic -53691 NM_001287053 101928448 Hs.208052 NM_001287053 LOC101928448 - uncharacterized LOC101928448 protein-coding Atac153_MAPQ30_peak_4750 chr3 69203275 69203275 + 3.83555 NA Intergenic Intergenic -31529 NM_198271 56203 Hs.350621 NM_198271 HPRD:13993 LMOD3 - leiomodin 3 (fetal) protein-coding Atac153_MAPQ30_peak_3212 chr19 8088191 8088191 + 3.83555 NA Intergenic AluSz|SINE|Alu -17662 NM_001419 1994 Hs.184492 NM_001419 HPRD:16025 ELAVL1 ELAV1|HUR|Hua|MelG ELAV like RNA binding protein 1 protein-coding Atac153_MAPQ30_peak_762 chr10 56048478 56048478 + 3.83555 NA intron (NM_001142769, intron 9 of 35) L1PA6|LINE|L1 512573 NM_001142765 65217 Hs.280209 NM_033056 HPRD:05698 PCDH15 CDHR15|DFNB23|USH1F protocadherin-related 15 protein-coding Atac153_MAPQ30_peak_1619 chr12 108639741 108639741 + 3.83555 NA intron (NM_014653, intron 8 of 8) intron (NM_014653, intron 8 of 8) 74698 NM_001142345 1240 Hs.197143 NM_004072 HPRD:03829 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemokine-like receptor 1 protein-coding Atac153_MAPQ30_peak_5459 chr5 153896802 153896802 + 3.83555 NA Intergenic Intergenic -38978 NM_004821 9421 Hs.152531 NM_004821 HPRD:03871 HAND1 Hxt|Thing1|bHLHa27|eHand heart and neural crest derivatives expressed 1 protein-coding Atac153_MAPQ30_peak_341 chr1 116208449 116208449 + 3.83555 NA intron (NM_138959, intron 4 of 7) intron (NM_138959, intron 4 of 7) 23199 NM_001172412 81839 Hs.515130 NM_138959 HPRD:18279 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding Atac153_MAPQ30_peak_522 chr1 212864840 212864840 + 3.83555 NA intron (NM_018664, intron 2 of 2) intron (NM_018664, intron 2 of 2) 8487 NM_018664 55509 Hs.62919 NM_018664 HPRD:18081 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper transcription factor, ATF-like 3 protein-coding Atac153_MAPQ30_peak_3027 chr18 14057318 14057318 + 3.83555 NA Intergenic Intergenic 75171 NM_145287 162655 Hs.352635 NM_145287 ZNF519 HsT2362 zinc finger protein 519 protein-coding Atac153_MAPQ30_peak_7244 chrX 140924576 140924576 + 3.83555 NA Intergenic Intergenic -1526 NM_138702 139081 Hs.356870 NM_138702 HPRD:06629 MAGEC3 CT7.2|HCA2|MAGE-C3|MAGEC4 melanoma antigen family C, 3 protein-coding Atac153_MAPQ30_peak_2359 chr16 2506324 2506324 + 3.83555 NA intron (NM_001761, intron 16 of 16) intron (NM_001761, intron 16 of 16) -3791 NM_025108 80178 Hs.534491 NM_025108 HPRD:07840 C16orf59 - chromosome 16 open reading frame 59 protein-coding Atac153_MAPQ30_peak_5716 chr6 74082041 74082041 + 3.83555 NA Intergenic Intergenic -2526 NM_001080507 441161 Hs.671212 NM_001080507 OOEP C6orf156|FLOPED|HOEP19|KHDC2 oocyte expressed protein protein-coding Atac153_MAPQ30_peak_5806 chr6 147257715 147257715 + 3.83555 NA intron (NR_034115, intron 7 of 10) LTR78|LTR|ERV1 -132755 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin p80 subunit B-like 1 pseudogene 6 pseudo Atac153_MAPQ30_peak_3476 chr2 28773981 28773981 + 3.83555 NA intron (NM_001170585, intron 16 of 56) intron (NM_001170585, intron 16 of 56) 55043 NM_153021 151056 Hs.444933 NM_153021 HPRD:15141 PLB1 PLB|PLB/LIP|hPLB phospholipase B1 protein-coding Atac153_MAPQ30_peak_1276 chr11 77704444 77704444 + 3.83555 NA intron (NM_033547, intron 1 of 22) L2c|LINE|L2 1273 NM_033547 92105 Hs.533723 NM_033547 HPRD:12386 INTS4 INT4|MST093 integrator complex subunit 4 protein-coding Atac153_MAPQ30_peak_4214 chr20 61755532 61755532 + 3.83555 NA Intergenic Intergenic -21861 NR_003245 768097 Hs.635159 NR_003245 ENSG00000231133 HAR1B HAR1R|LINC00065|NCRNA00065 highly accelerated region 1B (non-protein coding) ncRNA Atac153_MAPQ30_peak_5523 chr5 176499657 176499657 + 3.83555 NA Intergenic AluSz|SINE|Alu -14216 NM_002011 2264 Hs.165950 NM_002011 HPRD:00625 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding Atac153_MAPQ30_peak_2115 chr15 29236718 29236718 + 3.83555 NA intron (NM_001130414, intron 1 of 12) intron (NM_001130414, intron 1 of 12) 22878 NM_001130414 321 Hs.618112 NM_005503 HPRD:04090 APBA2 D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L amyloid beta (A4) precursor protein-binding, family A, member 2 protein-coding Atac153_MAPQ30_peak_46 chr1 7590307 7590307 + 3.83555 NA intron (NM_015215, intron 6 of 22) intron (NM_015215, intron 6 of 22) -241022 NM_004781 9341 Hs.66708 NM_004781 HPRD:04711 VAMP3 CEB vesicle-associated membrane protein 3 protein-coding Atac153_MAPQ30_peak_6910 chrX 12432807 12432807 + 3.83555 NA intron (NM_014728, intron 1 of 16) intron (NM_014728, intron 1 of 16) 276222 NM_014728 9758 Hs.657507 NM_014728 HPRD:10011 FRMPD4 PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding Atac153_MAPQ30_peak_4812 chr3 125773559 125773559 + 3.83555 NA intron (NM_001164475, intron 1 of 9) L2b|LINE|L2 2059 NM_001008487 54946 Hs.573007 NM_017836 HPRD:11580 SLC41A3 SLC41A1-L2 solute carrier family 41, member 3 protein-coding Atac153_MAPQ30_peak_6019 chr7 55532875 55532875 + 3.83555 NA Intergenic L1MA4A|LINE|L1 72534 NM_001284284 81552 Hs.488307 NM_030796 HPRD:08526 VOPP1 ECOP|GASP vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding Atac153_MAPQ30_peak_3573 chr2 71468864 71468864 + 3.83555 NA Intergenic Intergenic -14631 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding Atac153_MAPQ30_peak_4583 chr3 14206724 14206724 + 3.83555 NA intron (NR_027299, intron 5 of 14) L2c|LINE|L2 13448 NR_027299 7508 Hs.475538 NM_004628 HPRD:02046 XPC RAD4|XP3|XPCC xeroderma pigmentosum, complementation group C protein-coding Atac153_MAPQ30_peak_6762 chr9 116675484 116675484 + 3.83555 NA intron (NM_133374, intron 1 of 13) MIRb|SINE|MIR 36922 NM_133374 114991 Hs.349208 NM_133374 HPRD:18719 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding Atac153_MAPQ30_peak_2711 chr17 11479400 11479400 + 3.83555 NA Intergenic Intergenic -22348 NM_001372 1770 Hs.567259 NM_001372 HPRD:04511 DNAH9 DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein, axonemal, heavy chain 9 protein-coding Atac153_MAPQ30_peak_4793 chr3 114215015 114215015 + 3.83555 NA intron (NR_121661, intron 1 of 2) intron (NR_121661, intron 1 of 2) 42575 NR_121661 101929754 Hs.614195 NR_121661 LOC101929754 - uncharacterized LOC101929754 ncRNA Atac153_MAPQ30_peak_412 chr1 160897238 160897238 + 3.83555 NA Intergenic MER41-int|LTR|ERV1 -5017 NR_110695 101928372 NR_110695 ENSG00000198358 LOC101928372 - uncharacterized LOC101928372 ncRNA Atac153_MAPQ30_peak_7287 chrX 152831321 152831321 + 3.83555 NA intron (NM_001001344, intron 19 of 19) L2|LINE|L2 29741 NM_021949 492 Hs.533956 NM_021949 HPRD:02057 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase, Ca++ transporting, plasma membrane 3 protein-coding Atac153_MAPQ30_peak_1220 chr11 64705384 64705384 + 3.83555 NA TTS (NM_001037225) TTS (NM_001037225) -2024 NM_130769 170589 Hs.436119 NM_130769 HPRD:17052 GPHA2 A2|GPA2|ZSIG51 glycoprotein hormone alpha 2 protein-coding Atac153_MAPQ30_peak_663 chr10 11475962 11475962 + 3.83555 NA Intergenic Intergenic 98317 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding Atac153_MAPQ30_peak_6892 chrX 3628680 3628680 + 3.83555 NA intron (NM_005044, intron 1 of 8) AluSx1|SINE|Alu 2995 NM_005044 5613 Hs.390788 NM_005044 HPRD:02097 PRKX PKX1 protein kinase, X-linked protein-coding Atac153_MAPQ30_peak_3588 chr2 76221839 76221839 + 3.83555 NA Intergenic L1M2|LINE|L1 -283728 NM_001201335 6936 Hs.303808 NM_003203 HPRD:01791 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding Atac153_MAPQ30_peak_2826 chr17 41392306 41392306 + 3.83555 NA Intergenic MIRb|SINE|MIR -11244 NR_047479 100874261 Hs.546898 NR_047479 ENSG00000236383 LINC00854 TMEM106A-AS1 long intergenic non-protein coding RNA 854 ncRNA Atac153_MAPQ30_peak_517 chr1 209798818 209798818 + 3.83555 NA intron (NM_001017402, intron 13 of 21) MIRc|SINE|MIR -1963 NR_036213 100422894 NR_036213 MIR4260 - microRNA 4260 ncRNA Atac153_MAPQ30_peak_6968 chrX 32390512 32390512 + 3.83555 NA intron (NM_004009, intron 34 of 78) intron (NM_004009, intron 34 of 78) 39859 NM_004012 1756 Hs.495912 NM_000109 HPRD:02303 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding Atac153_MAPQ30_peak_6227 chr7 157759989 157759989 + 3.83555 NA intron (NM_130842, intron 10 of 21) AluJr|SINE|Alu 112712 NR_038966 100506585 Hs.661265 NR_038966 ENSG00000233038 LOC100506585 - uncharacterized LOC100506585 ncRNA Atac153_MAPQ30_peak_4598 chr3 24281999 24281999 + 3.83555 NA intron (NM_000461, intron 2 of 9) intron (NM_000461, intron 2 of 9) 89184 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA Atac153_MAPQ30_peak_545 chr1 224808961 224808961 + 3.83555 NA intron (NM_152495, intron 1 of 5) intron (NM_152495, intron 1 of 5) 4782 NM_152495 149111 Hs.731723 NM_152495 HPRD:08799 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding Atac153_MAPQ30_peak_2697 chr17 9176958 9176958 + 3.83555 NA intron (NM_004853, intron 7 of 7) intron (NM_004853, intron 7 of 7) -94523 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA Atac153_MAPQ30_peak_1161 chr11 44814318 44814318 + 3.83555 NA intron (NM_130783, intron 1 of 8) L2b|LINE|L2 28342 NM_130783 90139 Hs.385634 NM_130783 HPRD:17435 TSPAN18 TSPAN tetraspanin 18 protein-coding Atac153_MAPQ30_peak_5484 chr5 168385939 168385939 + 3.83555 NA intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) -54293 NR_109897 728095 Hs.145601 NR_109897 ENSG00000248222 CTB-174D11.1 - uncharacterized LOC728095 ncRNA Atac153_MAPQ30_peak_3822 chr2 196434896 196434896 + 3.83555 NA Intergenic Intergenic -86636 NM_001127257 57181 Hs.650158 NM_020342 HPRD:10572 SLC39A10 LZT-Hs2 solute carrier family 39 (zinc transporter), member 10 protein-coding Atac153_MAPQ30_peak_1787 chr13 31441003 31441003 + 3.83555 NA Intergenic Intergenic -15696 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA Atac153_MAPQ30_peak_3555 chr2 65155346 65155346 + 3.83555 NA intron (NR_036586, intron 1 of 2) MIRc|SINE|MIR 4235 NR_036586 400958 Hs.591565 NR_036586 LOC400958 - uncharacterized LOC400958 ncRNA Atac153_MAPQ30_peak_3511 chr2 42282589 42282589 + 3.83555 NA intron (NM_138370, intron 5 of 6) intron (NM_138370, intron 5 of 6) 7428 NM_138370 91461 Hs.408542 NM_138370 HPRD:18707 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding Atac153_MAPQ30_peak_7123 chrX 88292153 88292153 + 3.83555 NA Intergenic L1PBa|LINE|L1 289927 NM_001184771 53336 Hs.458292 NM_033048 HPRD:06474 CPXCR1 CT77 CPX chromosome region, candidate 1 protein-coding Atac153_MAPQ30_peak_1693 chr12 124909115 124909115 + 3.83555 NA intron (NM_001077261, intron 13 of 47) intron (NM_001077261, intron 13 of 47) -87327 NR_106940 102466204 NR_106940 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA Atac153_MAPQ30_peak_1745 chr12 132530105 132530105 + 3.83555 NA exon (NM_015409, exon 38 of 53) exon (NM_015409, exon 38 of 53) 14336 NR_002979 677829 Hs.742405 NR_002979 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA Atac153_MAPQ30_peak_2152 chr15 45496219 45496219 + 3.83555 NA Intergenic Intergenic -2846 NM_138356 90525 Hs.310399 NM_138356 HPRD:14272 SHF - Src homology 2 domain containing F protein-coding Atac153_MAPQ30_peak_2017 chr14 89421968 89421968 + 3.83555 NA Intergenic Intergenic 131471 NM_001288782 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding Atac153_MAPQ30_peak_2191 chr15 65009852 65009852 + 3.83555 NA Intergenic MIRc|SINE|MIR -14372 NM_002537 4947 Hs.744924 NM_002537 HPRD:11966 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding Atac153_MAPQ30_peak_4915 chr3 177002362 177002362 + 3.83555 NA Intergenic Intergenic -9868 NR_047465 100820709 Hs.518409 NR_047465 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA Atac153_MAPQ30_peak_1034 chr11 238352 238352 + 3.83555 NA intron (NM_175932, intron 1 of 10) MIRc|SINE|MIR 1544 NM_175932 5719 Hs.134688 NM_002817 HPRD:04595 PSMD13 HSPC027|Rpn9|S11|p40.5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 protein-coding Atac153_MAPQ30_peak_657 chr10 7524619 7524619 + 3.83555 NA Intergenic Intergenic -71171 NM_001029880 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm-like with four mbt domains 2 protein-coding Atac153_MAPQ30_peak_2257 chr15 76316289 76316289 + 3.83555 NA Intergenic L1M2c|LINE|L1 -11504 NM_138573 145957 Hs.732438 NM_138573 NRG4 HRG4 neuregulin 4 protein-coding Atac153_MAPQ30_peak_972 chr10 127461752 127461752 + 3.83555 NA intron (NM_147191, intron 2 of 6) intron (NM_147191, intron 2 of 6) 2638 NM_147191 118856 Hs.314141 NM_147191 HPRD:07003 MMP21 MMP-21 matrix metallopeptidase 21 protein-coding Atac153_MAPQ30_peak_4351 chr22 23506736 23506736 + 3.83555 NA TTS (NM_004914) TTS (NM_004914) -15816 NM_021574 613 Hs.517461 NM_004327 HPRD:01044 BCR ALL|BCR1|CML|D22S11|D22S662|PHL breakpoint cluster region protein-coding Atac153_MAPQ30_peak_7099 chrX 71534043 71534043 + 3.83555 NA Intergenic Intergenic -7006 NM_001144886 4435 Hs.40403 NM_004143 HPRD:02146 CITED1 MSG1 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 protein-coding Atac153_MAPQ30_peak_955 chr10 125555986 125555986 + 3.83555 NA intron (NM_198148, intron 6 of 13) intron (NM_198148, intron 6 of 13) 95514 NM_198148 119587 Hs.656887 NM_198148 HPRD:08517 CPXM2 CPX2|UNQ676 carboxypeptidase X (M14 family), member 2 protein-coding Atac153_MAPQ30_peak_6919 chrX 16499278 16499278 + 3.83555 NA Intergenic Intergenic -169003 NM_004057 795 Hs.639 NM_004057 HPRD:02360 S100G CABP|CABP1|CABP9K|CALB3 S100 calcium binding protein G protein-coding Atac153_MAPQ30_peak_7040 chrX 53887936 53887936 + 3.83555 NA Intergenic L1MA3|LINE|L1 -174262 NM_031407 10075 Hs.136905 NM_031407 HPRD:06608 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_159 chr1 29710622 29710622 + 3.83555 NA Intergenic Intergenic -33996 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LOC101928460 - uncharacterized LOC101928460 ncRNA Atac153_MAPQ30_peak_2918 chr17 71115246 71115246 + 3.83555 NA Intergenic Intergenic -26393 NM_001159770 201266 Hs.221127 NM_139177 HPRD:15383 SLC39A11 C17orf26|ZIP11 solute carrier family 39, member 11 protein-coding Atac153_MAPQ30_peak_3861 chr2 217400242 217400242 + 3.83555 NA Intergenic Intergenic 36722 NM_000998 6168 Hs.433701 NM_000998 RPL37A L37A ribosomal protein L37a protein-coding Atac153_MAPQ30_peak_5618 chr6 26124364 26124364 + 3.83555 NA promoter-TSS (NM_003512) promoter-TSS (NM_003512) -9 NM_003512 8334 Hs.484950 NM_003512 HPRD:09104 HIST1H2AC H2A/l|H2AFL|dJ221C16.4 histone cluster 1, H2ac protein-coding Atac153_MAPQ30_peak_1057 chr11 6415486 6415486 + 3.83555 NA TTS (NM_001257323) TTS (NM_001257323) 3842 NM_000543 6609 Hs.498173 NM_000543 HPRD:06353 SMPD1 ASM|ASMASE|NPD sphingomyelin phosphodiesterase 1, acid lysosomal protein-coding Atac153_MAPQ30_peak_6938 chrX 19361112 19361112 + 3.83555 NA promoter-TSS (NM_000284) promoter-TSS (NM_000284) -899 NM_001173455 5160 Hs.530331 NM_000284 HPRD:02420 PDHA1 PDHA|PDHCE1A|PHE1A pyruvate dehydrogenase (lipoamide) alpha 1 protein-coding Atac153_MAPQ30_peak_7085 chrX 68451805 68451805 + 3.83555 NA Intergenic Intergenic 52405 NR_103715 100996279 NR_103715 ENSG00000215162 LINC00269 CXorf62|NCRNA00269 long intergenic non-protein coding RNA 269 ncRNA Atac153_MAPQ30_peak_2334 chr15 99320176 99320176 + 3.83555 NA intron (NM_001291858, intron 2 of 20) intron (NM_001291858, intron 2 of 20) -7479 NR_039864 100616432 NR_039864 MIR4714 - microRNA 4714 ncRNA Atac153_MAPQ30_peak_5856 chr6 168135283 168135283 + 3.83555 NA Intergenic Intergenic -50816 NR_117092 441178 Hs.628956 NM_001025489 LOC441178 - uncharacterized LOC441178 ncRNA Atac153_MAPQ30_peak_4755 chr3 71698841 71698841 + 3.83555 NA Intergenic Intergenic -65701 NM_001244810 27086 Hs.59368 NM_032682 HPRD:18518 FOXP1 12CC4|QRF1|hFKH1B forkhead box P1 protein-coding Atac153_MAPQ30_peak_6486 chr8 129812698 129812698 + 3.83555 NA Intergenic Intergenic -235773 NR_121673 101927774 Hs.628730 NR_121672 ENSG00000254275 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA Atac153_MAPQ30_peak_1761 chr13 22243706 22243706 + 3.83555 NA Intergenic CpG -1509 NM_002010 2254 Hs.111 NM_002010 HPRD:02951 FGF9 FGF-9|GAF|HBFG-9|HBGF-9|SYNS3 fibroblast growth factor 9 protein-coding Atac153_MAPQ30_peak_3472 chr2 27739638 27739638 + 3.83555 NA intron (NM_001486, intron 16 of 18) intron (NM_001486, intron 16 of 18) 19932 NM_001486 2646 Hs.89771 NM_001486 HPRD:02909 GCKR FGQTL5|GKRP glucokinase (hexokinase 4) regulator protein-coding Atac153_MAPQ30_peak_4574 chr3 13338011 13338011 + 3.83555 NA Intergenic Intergenic 123808 NM_024923 23225 Hs.475525 NM_024923 HPRD:06368 NUP210 GP210|POM210 nucleoporin 210kDa protein-coding Atac153_MAPQ30_peak_482 chr1 202684427 202684427 + 3.83555 NA Intergenic Intergenic -4876 NM_177402 127833 Hs.25422 NM_177402 HPRD:02520 SYT2 SytII synaptotagmin II protein-coding Atac153_MAPQ30_peak_5364 chr5 106179653 106179653 + 3.83555 NA intron (NR_104671, intron 2 of 3) LTR78|LTR|ERV1 167062 NR_104671 102467213 Hs.570923 NR_104671 LOC102467213 - uncharacterized LOC102467213 ncRNA Atac153_MAPQ30_peak_2810 chr17 36908845 36908845 + 3.83555 NA promoter-TSS (NM_002795) promoter-TSS (NM_002795) -121 NR_104194 5691 Hs.82793 NM_002795 HPRD:03709 PSMB3 HC10-II proteasome (prosome, macropain) subunit, beta type, 3 protein-coding Atac153_MAPQ30_peak_5821 chr6 157933394 157933394 + 3.83555 NA intron (NM_153746, intron 1 of 8) intron (NM_153746, intron 1 of 8) -16770 NR_037463 100500899 NR_037463 MIR3692 - microRNA 3692 ncRNA Atac153_MAPQ30_peak_457 chr1 183693870 183693870 + 3.83555 NA intron (NM_001297669, intron 2 of 18) L1M1|LINE|L1 -71422 NM_203454 403314 Hs.97335 NM_203454 HPRD:17522 APOBEC4 C1orf169 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) protein-coding Atac153_MAPQ30_peak_2939 chr17 74893392 74893392 + 3.83555 NA intron (NM_198955, intron 2 of 15) MLT1C|LTR|ERVL-MaLR 24663 NM_198955 146664 Hs.144531 NM_144677 HPRD:14392 MGAT5B GnT-IX|GnT-VB mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B protein-coding Atac153_MAPQ30_peak_2782 chr17 26881177 26881177 + 3.83555 NA 3' UTR (NM_033198, exon 12 of 12) 3' UTR (NM_033198, exon 12 of 12) -1531 NM_005148 9094 Hs.410455 NM_005148 HPRD:04927 UNC119 HRG4|IMD13|POC7|POC7A unc-119 homolog (C. elegans) protein-coding Atac153_MAPQ30_peak_1528 chr12 53900958 53900958 + 3.83555 NA TTS (NM_004178) TTS (NM_004178) 464 NM_003717 8620 Hs.733076 NM_003717 HPRD:06869 NPFF FMRFAL neuropeptide FF-amide peptide precursor protein-coding Atac153_MAPQ30_peak_5904 chr7 4212795 4212795 + 3.83555 NA intron (NM_152744, intron 32 of 44) intron (NM_152744, intron 32 of 44) 43478 NM_001079653 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_1732 chr12 130914507 130914507 + 3.83555 NA intron (NM_015347, intron 11 of 18) intron (NM_015347, intron 11 of 18) 87903 NM_015347 23504 Hs.657441 NM_015347 HPRD:17183 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding Atac153_MAPQ30_peak_1984 chr14 74693928 74693928 + 3.83555 NA Intergenic AluSx1|SINE|Alu -12247 NM_182894 338917 Hs.449771 NM_182894 HPRD:08852 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding Atac153_MAPQ30_peak_7144 chrX 104749847 104749847 + 3.83555 NA intron (NM_017416, intron 6 of 10) intron (NM_017416, intron 6 of 10) -284470 NM_001291277 56157 Hs.567543 NM_031274 HPRD:02257 TEX13A - testis expressed 13A protein-coding Atac153_MAPQ30_peak_3731 chr2 130578972 130578972 + 3.83555 NA Intergenic L2c|LINE|L2 -101778 NR_110285 101927924 Hs.570248 NR_110285 ENSG00000237574 LOC101927924 - uncharacterized LOC101927924 ncRNA Atac153_MAPQ30_peak_2737 chr17 18036073 18036073 + 3.83555 NA intron (NM_016239, intron 10 of 64) intron (NM_016239, intron 10 of 64) 24053 NM_016239 51168 Hs.462390 NM_016239 HPRD:04049 MYO15A DFNB3|MYO15 myosin XVA protein-coding Atac153_MAPQ30_peak_2303 chr15 89415557 89415557 + 3.83555 NA intron (NM_001135, intron 14 of 15) intron (NM_001135, intron 14 of 15) 23213 NM_178232 145864 Hs.447530 NM_178232 HPRD:13629 HAPLN3 EXLD1|HsT19883 hyaluronan and proteoglycan link protein 3 protein-coding Atac153_MAPQ30_peak_2893 chr17 62185049 62185049 + 3.83555 NA intron (NM_001433, intron 1 of 21) intron (NM_001433, intron 1 of 21) 22453 NM_001433 2081 Hs.133982 NM_001433 HPRD:04943 ERN1 IRE1|IRE1P|IRE1a|hIRE1p endoplasmic reticulum to nucleus signaling 1 protein-coding Atac153_MAPQ30_peak_1042 chr11 2689320 2689320 + 3.83555 NA non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 31908 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_708 chr10 32778053 32778053 + 3.83555 NA intron (NR_109826, intron 9 of 16) intron (NR_109826, intron 9 of 16) 43043 NR_109826 79741 Hs.585464 NM_024688 HPRD:10698 CCDC7 BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding Atac153_MAPQ30_peak_4918 chr3 179484112 179484112 + 3.83555 NA intron (NM_003940, intron 19 of 20) intron (NM_003940, intron 19 of 20) 113179 NM_003940 8975 Hs.175322 NM_003940 HPRD:04666 USP13 ISOT3|IsoT-3 ubiquitin specific peptidase 13 (isopeptidase T-3) protein-coding Atac153_MAPQ30_peak_4116 chr20 42341678 42341678 + 3.83555 NA exon (NM_002466, exon 12 of 14) exon (NM_002466, exon 12 of 14) 13964 NM_001008901 149699 Hs.447626 NM_176791 HPRD:12778 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1-like protein-coding Atac153_MAPQ30_peak_2432 chr16 20942829 20942829 + 3.83555 NA Intergenic MIRb|SINE|MIR 30754 NM_001128302 57149 Hs.745012 NM_020424 HPRD:14254 LYRM1 A211C6.1 LYR motif containing 1 protein-coding Atac153_MAPQ30_peak_876 chr10 102099414 102099414 + 3.83555 NA Intergenic Intergenic -7358 NM_005063 6319 Hs.558396 NM_005063 HPRD:04941 SCD FADS5|MSTP008|SCD1|SCDOS stearoyl-CoA desaturase (delta-9-desaturase) protein-coding Atac153_MAPQ30_peak_3558 chr2 65504741 65504741 + 3.83555 NA Intergenic Intergenic 49912 NM_001005386 10097 Hs.643727 NM_005722 HPRD:05023 ACTR2 ARP2 ARP2 actin-related protein 2 homolog (yeast) protein-coding Atac153_MAPQ30_peak_4058 chr20 30179182 30179182 + 3.83555 NA Intergenic Intergenic -13904 NM_181353 3397 Hs.504609 NM_002165 HPRD:08980 ID1 ID|bHLHb24 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein protein-coding Atac153_MAPQ30_peak_2954 chr17 77142738 77142738 + 3.83555 NA intron (NM_001082575, intron 4 of 14) intron (NM_001082575, intron 4 of 14) 71719 NM_001042573 64772 Hs.29288 NM_022759 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding Atac153_MAPQ30_peak_7035 chrX 53072785 53072785 + 3.83555 NA Intergenic Intergenic -5721 NM_018969 54328 Hs.193011 NM_018969 HPRD:02220 GPR173 SREB3 G protein-coupled receptor 173 protein-coding Atac153_MAPQ30_peak_3993 chr20 6139378 6139378 + 3.83555 NA Intergenic Intergenic -35187 NM_017671 55612 Hs.472054 NM_017671 HPRD:06388 FERMT1 C20orf42|DTGCU2|KIND1|UNC112A|URP1 fermitin family member 1 protein-coding Atac153_MAPQ30_peak_6343 chr8 37389468 37389468 + 3.83555 NA Intergenic Intergenic -10564 NR_121621 100507420 Hs.105962 NR_121620 LOC100507420 - uncharacterized LOC100507420 ncRNA Atac153_MAPQ30_peak_3263 chr19 29581726 29581726 + 3.83555 NA Intergenic L1ME4a|LINE|L1 88264 NR_040036 100505835 Hs.176539 NR_040036 ENSG00000267014 LOC100505835 - uncharacterized LOC100505835 ncRNA Atac153_MAPQ30_peak_2527 chr16 58202183 58202183 + 3.83555 NA intron (NM_001896, intron 6 of 11) intron (NM_001896, intron 6 of 11) 29599 NM_001896 1459 Hs.82201 NM_001896 HPRD:00279 CSNK2A2 CK2A2|CSNK2A1 casein kinase 2, alpha prime polypeptide protein-coding Atac153_MAPQ30_peak_2049 chr14 96720109 96720109 + 3.83555 NA Intergenic Intergenic -2438 NM_000710 623 Hs.525572 NM_000710 HPRD:02639 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding Atac153_MAPQ30_peak_7232 chrX 136481904 136481904 + 3.83555 NA Intergenic L1MA2|LINE|L1 -166442 NM_003413 7547 Hs.111227 NM_003413 HPRD:02225 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding Atac153_MAPQ30_peak_6744 chr9 111278188 111278188 + 3.83555 NA Intergenic THE1D|LTR|ERVL-MaLR 340087 NM_006686 10880 Hs.534390 NM_006686 ACTL7B Tact1 actin-like 7B protein-coding Atac153_MAPQ30_peak_5375 chr5 112824860 112824860 + 3.83555 NA promoter-TSS (NM_001085377) promoter-TSS (NM_001085377) -333 NM_001085377 4163 Hs.593171 NM_002387 HPRD:01157 MCC MCC1 mutated in colorectal cancers protein-coding Atac153_MAPQ30_peak_803 chr10 75872065 75872065 + 3.83555 NA intron (NM_014000, intron 19 of 21) intron (NM_014000, intron 19 of 21) 38761 NM_012095 26985 Hs.500104 NM_012095 AP3M1 - adaptor-related protein complex 3, mu 1 subunit protein-coding Atac153_MAPQ30_peak_4080 chr20 34736015 34736015 + 3.83555 NA intron (NM_001258330, intron 3 of 20) intron (NM_001258330, intron 3 of 20) -6647 NM_012156 2036 Hs.437422 NM_012156 HPRD:04193 EPB41L1 4.1N|MRD11 erythrocyte membrane protein band 4.1-like 1 protein-coding Atac153_MAPQ30_peak_5580 chr6 6602930 6602930 + 3.83555 NA intron (NM_004271, intron 1 of 4) LTR16C|LTR|ERVL 13996 NM_004271 9450 Hs.653138 NM_004271 LY86 MD-1|MMD-1|dJ80N2.1 lymphocyte antigen 86 protein-coding Atac153_MAPQ30_peak_1820 chr13 52372156 52372156 + 3.83555 NA intron (NM_001270424, intron 2 of 9) intron (NM_001270424, intron 2 of 9) 6142 NM_001031719 79758 Hs.266728 NM_024705 HPRD:07833 DHRS12 SDR40C1 dehydrogenase/reductase (SDR family) member 12 protein-coding Atac153_MAPQ30_peak_4452 chr22 41513933 41513933 + 3.83555 NA intron (NM_001429, intron 2 of 30) intron (NM_001429, intron 2 of 30) 25319 NM_001429 2033 Hs.517517 NM_001429 HPRD:04078 EP300 KAT3B|RSTS2|p300 E1A binding protein p300 protein-coding Atac153_MAPQ30_peak_7281 chrX 151743081 151743081 + 3.83555 NA Intergenic Intergenic -63556 NM_018558 55879 Hs.283081 NM_018558 GABRQ THETA gamma-aminobutyric acid (GABA) A receptor, theta protein-coding Atac153_MAPQ30_peak_4424 chr22 35984361 35984361 + 3.83555 NA Intergenic MIRb|SINE|MIR 29023 NM_005368 4151 Hs.517586 NM_005368 HPRD:01170 MB PVALB|myoglobgin myoglobin protein-coding Atac153_MAPQ30_peak_6877 chrX 398633 398633 + 3.83555 NA Intergenic CpG -50943 NM_013239 28227 Hs.124942 NM_013239 HPRD:02276 PPP2R3B NYREN8|PPP2R3L|PPP2R3LY|PR48 protein phosphatase 2, regulatory subunit B'', beta protein-coding Atac153_MAPQ30_peak_5158 chr4 146331319 146331319 + 3.83555 NA Intergenic Intergenic -71632 NM_005900 4086 Hs.604588 NM_005900 HPRD:03356 SMAD1 BSP-1|BSP1|JV4-1|JV41|MADH1|MADR1 SMAD family member 1 protein-coding Atac153_MAPQ30_peak_2402 chr16 12411077 12411077 + 3.83555 NA intron (NM_032167, intron 15 of 20) intron (NM_032167, intron 15 of 20) 340475 NM_032167 92017 Hs.458401 NM_032167 HPRD:17437 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding Atac153_MAPQ30_peak_1009 chr10 132663254 132663254 + 3.83555 NA Intergenic Intergenic 97677 NR_036180 100422867 NR_036180 miRBase:MI0015825 MIR378C - microRNA 378c ncRNA Atac153_MAPQ30_peak_5126 chr4 99416910 99416910 + 3.83555 NA intron (NM_005723, intron 2 of 7) intron (NM_005723, intron 2 of 7) 162902 NM_005723 10098 Hs.118118 NM_005723 HPRD:15513 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding Atac153_MAPQ30_peak_4772 chr3 96212910 96212910 + 3.83555 NA Intergenic L1PA15|LINE|L1 134102 NR_107027 102465864 NR_107027 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA Atac153_MAPQ30_peak_4684 chr3 50480167 50480167 + 3.83555 NA intron (NM_001005505, intron 2 of 37) intron (NM_001005505, intron 2 of 37) 60861 NM_001174051 9254 Hs.476273 NM_006030 HPRD:06154 CACNA2D2 CACNA2D calcium channel, voltage-dependent, alpha 2/delta subunit 2 protein-coding Atac153_MAPQ30_peak_5415 chr5 135343096 135343096 + 3.83555 NA Intergenic Intergenic -21488 NM_000358 7045 Hs.369397 NM_000358 HPRD:03409 TGFBI BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1 transforming growth factor, beta-induced, 68kDa protein-coding Atac153_MAPQ30_peak_7062 chrX 63445583 63445583 + 3.83555 NA intron (NM_130388, intron 1 of 2) intron (NM_130388, intron 1 of 2) 4928 NM_130388 142689 Hs.56281 NM_130388 HPRD:06451 ASB12 - ankyrin repeat and SOCS box containing 12 protein-coding Atac153_MAPQ30_peak_3959 chr2 242031344 242031344 + 3.83555 NA 3' UTR (NM_001080437, exon 32 of 32) 3' UTR (NM_001080437, exon 32 of 32) 10403 NR_028049 130916 Hs.159556 NM_182501 HPRD:14699 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding Atac153_MAPQ30_peak_6815 chr9 130893114 130893114 + 3.83555 NA TTS (NR_024425) TTS (NR_024425) 2306 NR_024425 389791 Hs.632678 NM_001013652 PTGES2-AS1 - PTGES2 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_5252 chr5 9174372 9174372 + 3.83555 NA intron (NM_003966, intron 11 of 22) intron (NM_003966, intron 11 of 22) -120365 NR_039779 100616326 NR_039779 MIR4636 - microRNA 4636 ncRNA Atac153_MAPQ30_peak_3627 chr2 97061794 97061794 + 3.83555 NA Intergenic LTR50|LTR|ERVL 60315 NM_015341 23397 Hs.308045 NM_015341 HPRD:03820 NCAPH BRRN1|CAP-H non-SMC condensin I complex, subunit H protein-coding Atac153_MAPQ30_peak_3197 chr19 4013290 4013290 + 3.83555 NA exon (NM_015897, exon 2 of 11) exon (NM_015897, exon 2 of 11) 5541 NM_015897 51588 Hs.105779 NM_015897 PIAS4 PIASY|Piasg|ZMIZ6 protein inhibitor of activated STAT, 4 protein-coding Atac153_MAPQ30_peak_6115 chr7 122330083 122330083 + 3.83555 NA intron (NM_001009571, intron 2 of 27) HERVL18-int|LTR|ERVL 9125 NM_139175 168433 Hs.126730 NM_139175 HPRD:11505 RNF133 - ring finger protein 133 protein-coding Atac153_MAPQ30_peak_1957 chr14 67879032 67879032 + 3.83555 NA promoter-TSS (NM_016445) promoter-TSS (NM_016445) -204 NM_016445 26499 Hs.170473 NM_016445 HPRD:12151 PLEK2 - pleckstrin 2 protein-coding Atac153_MAPQ30_peak_230 chr1 43902607 43902607 + 3.83555 NA intron (NM_015284, intron 41 of 70) intron (NM_015284, intron 41 of 70) -11603 NR_106793 102465440 NR_106793 MIR6735 hsa-mir-6735 microRNA 6735 ncRNA Atac153_MAPQ30_peak_5895 chr7 2800736 2800736 + 3.83555 NA intron (NM_007353, intron 2 of 3) intron (NM_007353, intron 2 of 3) 2038 NM_001282440 2768 Hs.487341 NM_007353 HPRD:05093 GNA12 NNX3|RMP|gep guanine nucleotide binding protein (G protein) alpha 12 protein-coding Atac153_MAPQ30_peak_7194 chrX 123401668 123401668 + 3.83555 NA Intergenic Intergenic -78464 NM_002351 4068 Hs.349094 NM_002351 HPRD:02390 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding Atac153_MAPQ30_peak_6174 chr7 141039087 141039087 + 3.83555 NA intron (NM_001195278, intron 2 of 3) intron (NM_001195278, intron 2 of 3) -211991 NM_018238 55750 Hs.743318 NM_018238 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding Atac153_MAPQ30_peak_5019 chr4 9890636 9890636 + 3.83555 NA intron (NM_001001290, intron 10 of 12) L2c|LINE|L2 107378 NM_000798 1816 Hs.380681 NM_000798 HPRD:00542 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding Atac153_MAPQ30_peak_5214 chr5 1432770 1432770 + 3.83555 NA exon (NM_001044, exon 4 of 15) exon (NM_001044, exon 4 of 15) 12773 NM_001044 6531 Hs.406 NM_001044 HPRD:00543 SLC6A3 DAT|DAT1|PKDYS solute carrier family 6 (neurotransmitter transporter), member 3 protein-coding Atac153_MAPQ30_peak_5247 chr5 7517071 7517071 + 3.83555 NA intron (NM_020546, intron 2 of 24) intron (NM_020546, intron 2 of 24) 120728 NM_020546 108 Hs.481545 NM_020546 HPRD:00052 ADCY2 AC2|HBAC2 adenylate cyclase 2 (brain) protein-coding Atac153_MAPQ30_peak_605 chr1 238048854 238048854 + 3.83555 NA exon (NM_021186, exon 8 of 13) exon (NM_021186, exon 8 of 13) 5368 NM_021186 57829 Hs.136241 NM_021186 ZP4 ZBP|ZP1|ZPB|Zp-4 zona pellucida glycoprotein 4 protein-coding Atac153_MAPQ30_peak_3237 chr19 15622649 15622649 + 3.83555 NA intron (NM_173483, intron 1 of 13) intron (NM_173483, intron 1 of 13) 3313 NM_173483 126410 Hs.156452 NM_173483 HPRD:08256 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450, family 4, subfamily F, polypeptide 22 protein-coding Atac153_MAPQ30_peak_1512 chr12 49927166 49927166 + 3.83555 NA Intergenic Intergenic -5774 NM_012284 23416 Hs.64064 NM_012284 HPRD:05164 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel, subfamily H (eag-related), member 3 protein-coding Atac153_MAPQ30_peak_6550 chr8 143326540 143326540 + 3.83555 NA intron (NM_145003, intron 12 of 13) L1ME3E|LINE|L1 46823 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA Atac153_MAPQ30_peak_1296 chr11 94587065 94587065 + 3.83555 NA intron (NM_001301007, intron 6 of 11) intron (NM_001301007, intron 6 of 11) 85557 NM_130847 154810 Hs.503594 NM_130847 HPRD:12451 AMOTL1 JEAP angiomotin like 1 protein-coding Atac153_MAPQ30_peak_6142 chr7 132013250 132013250 + 3.83555 NA intron (NM_020911, intron 3 of 31) intron (NM_020911, intron 3 of 31) 248073 NM_020911 91584 Hs.511454 NM_020911 HPRD:10901 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding Atac153_MAPQ30_peak_898 chr10 106475619 106475619 + 3.83555 NA intron (NM_014978, intron 1 of 26) L2a|LINE|L2 -49645 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3375 chr2 2202218 2202218 + 3.83555 NA intron (NM_015025, intron 2 of 24) L1MA6|LINE|L1 -120786 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3431 chr2 16349778 16349778 + 3.83555 NA Intergenic MIRb|SINE|MIR -267933 NR_110230 10408 Hs.651453 NM_006316 ENSG00000233718 MYCNOS MYCN-AS1|N-CYM|NCYM|NYCM MYCN opposite strand ncRNA Atac153_MAPQ30_peak_2079 chr14 102774512 102774512 + 3.83555 NA Intergenic MER5A|DNA|hAT-Charlie -2975 NM_014226 5891 Hs.104119 NM_014226 HPRD:09310 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding Atac153_MAPQ30_peak_3524 chr2 46686604 46686604 + 3.83555 NA Intergenic Intergenic -20100 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000187600 TMEM247 - transmembrane protein 247 protein-coding Atac153_MAPQ30_peak_533 chr1 217015065 217015065 + 3.83555 NA intron (NM_001243513, intron 1 of 7) intron (NM_001243513, intron 1 of 7) -36356 NM_001243514 2104 Hs.444225 NM_001438 HPRD:04274 ESRRG ERR3|ERRgamma|NR3B3 estrogen-related receptor gamma protein-coding Atac153_MAPQ30_peak_4129 chr20 44982342 44982342 + 3.83555 NA intron (NM_001281458, intron 8 of 10) L3b|LINE|CR1 10755 NM_015945 51006 Hs.593344 NM_015945 HPRD:15371 SLC35C2 BA394O2.1|C20orf5|CGI-15|OVCOV1 solute carrier family 35 (GDP-fucose transporter), member C2 protein-coding Atac153_MAPQ30_peak_6424 chr8 96289077 96289077 + 3.83555 NA intron (NR_038204, intron 1 of 3) intron (NR_038204, intron 1 of 3) -7615 NM_177965 157657 Hs.548157 NM_177965 HPRD:14104 C8orf37 CORD16|RP64|smalltalk chromosome 8 open reading frame 37 protein-coding Atac153_MAPQ30_peak_1707 chr12 126275887 126275887 + 3.83555 NA Intergenic Intergenic 168889 NM_001286219 114795 Hs.524838 NM_052907 TMEM132B - transmembrane protein 132B protein-coding Atac153_MAPQ30_peak_2436 chr16 22221534 22221534 + 3.83555 NA intron (NM_013302, intron 1 of 17) intron (NM_013302, intron 1 of 17) 3942 NM_013302 29904 Hs.498892 NM_013302 EEF2K HSU93850|eEF-2K eukaryotic elongation factor-2 kinase protein-coding Atac153_MAPQ30_peak_6515 chr8 138883379 138883379 + 3.83555 NA Intergenic Intergenic -457548 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA Atac153_MAPQ30_peak_4465 chr22 43898587 43898587 + 3.83555 NA exon (NM_001044370, exon 6 of 7) exon (NM_001044370, exon 6 of 7) -13547 NR_046563 100874197 Hs.627997 NR_046563 ENSG00000223843 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2523 chr16 57747752 57747752 + 3.83555 NA intron (NM_001289162, intron 8 of 18) intron (NM_001289162, intron 8 of 18) 19039 NM_001289162 84229 Hs.513635 NM_032269 HPRD:10902 CCDC135 C16orf50|FAP50 coiled-coil domain containing 135 protein-coding Atac153_MAPQ30_peak_94 chr1 16394065 16394065 + 3.83555 NA intron (NM_182623, intron 1 of 6) intron (NM_182623, intron 1 of 6) 6062 NM_182623 348487 Hs.126825 NM_182623 HPRD:08779 FAM131C C1orf117 family with sequence similarity 131, member C protein-coding Atac153_MAPQ30_peak_6190 chr7 150524498 150524498 + 3.83555 NA Intergenic Intergenic -25067 NM_001272072 26 Hs.647097 NM_001091 HPRD:00088 AOC1 ABP|ABP1|DAO|DAO1|KAO amine oxidase, copper containing 1 protein-coding Atac153_MAPQ30_peak_5675 chr6 40525346 40525346 + 3.83555 NA intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 29780 NM_020737 57497 Hs.250015 NM_020737 HPRD:17444 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding Atac153_MAPQ30_peak_1485 chr12 31188943 31188943 + 3.83555 NA intron (NR_038927, intron 2 of 2) intron (NR_038927, intron 2 of 2) -37836 NM_004399 1663 Hs.443960 NM_004399 HPRD:03095 DDX11 CHL1|CHLR1|KRG2|WABS DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 protein-coding Atac153_MAPQ30_peak_4272 chr21 39104639 39104639 + 3.83555 NA intron (NM_002240, intron 2 of 3) intron (NM_002240, intron 2 of 3) 184102 NM_002240 3763 Hs.626242 NM_002240 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|hiGIRK2 potassium inwardly-rectifying channel, subfamily J, member 6 protein-coding Atac153_MAPQ30_peak_4566 chr3 12541068 12541068 + 3.83555 NA intron (NM_001145394, intron 4 of 12) MIR|SINE|MIR 15058 NM_001145392 80746 Hs.335550 NM_025265 HPRD:10576 TSEN2 PCH2B|SEN2|SEN2L TSEN2 tRNA splicing endonuclease subunit protein-coding Atac153_MAPQ30_peak_6863 chr9 139117216 139117216 + 3.83555 NA intron (NM_181701, intron 2 of 11) intron (NM_181701, intron 2 of 11) -20261 NM_178138 8022 Hs.148427 NM_014564 HPRD:02783 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding Atac153_MAPQ30_peak_880 chr10 104114383 104114383 + 3.83555 NA intron (NM_001199379, intron 8 of 39) intron (NM_001199379, intron 8 of 39) -39484 NM_001288724 4791 Hs.73090 NM_002502 HPRD:01239 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p105|p52 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) protein-coding Atac153_MAPQ30_peak_3833 chr2 202317133 202317133 + 3.83555 NA promoter-TSS (NM_015049) promoter-TSS (NM_015049) 741 NM_018571 55437 Hs.652338 NM_018571 HPRD:09546 STRADB ALS2CR2|CALS-21|ILPIP|ILPIPA|PAPK STE20-related kinase adaptor beta protein-coding Atac153_MAPQ30_peak_7247 chrX 142101817 142101817 + 3.83555 NA Intergenic L1MA2|LINE|L1 -11887 NM_001009613 441525 Hs.535082 NM_001009613 HPRD:18093 SPANXN4 CT11.9 SPANX family, member N4 protein-coding Atac153_MAPQ30_peak_7141 chrX 103276978 103276978 + 3.83555 NA intron (NR_031657, intron 1 of 1).2 intron (NR_031657, intron 1 of 1).2 -8719 NM_001002916 158983 Hs.127778 NM_001002916 HPRD:15956 H2BFWT - H2B histone family, member W, testis-specific protein-coding Atac153_MAPQ30_peak_5882 chr7 1062080 1062080 + 3.83555 NA TTS (NR_029898) TTS (NR_029898) 582 NR_029898 442907 NR_029898 MIR339 MIRN339|hsa-mir-339 microRNA 339 ncRNA Atac153_MAPQ30_peak_4246 chr21 33030161 33030161 + 3.83555 NA Intergenic MER20|DNA|hAT-Charlie -1774 NM_000454 6647 Hs.443914 NM_000454 HPRD:00937 SOD1 ALS|ALS1|HEL-S-44|IPOA|SOD|hSod1|homodimer superoxide dismutase 1, soluble protein-coding Atac153_MAPQ30_peak_7130 chrX 96678088 96678088 + 3.83555 NA intron (NM_007309, intron 25 of 26) LTR40a|LTR|ERVL 141446 NR_125391 10824 Hs.654372 NR_125391 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_7053 chrX 58170393 58170393 + 3.83555 NA Intergenic HSAT4|Satellite|centr -233326 NM_007156 7789 Hs.550094 NM_007156 HPRD:02210 ZXDA ZNF896 zinc finger, X-linked, duplicated A protein-coding Atac153_MAPQ30_peak_1925 chr14 55243808 55243808 + 3.83555 NA intron (NM_001161576, intron 9 of 10) intron (NM_001161576, intron 9 of 10) 22302 NM_001161577 23034 Hs.98259 NM_015589 HPRD:10209 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding Atac153_MAPQ30_peak_2722 chr17 15321055 15321055 + 3.83555 NA Intergenic MIR|SINE|MIR 49870 NM_001204477 284040 Hs.164595 NM_173622 HPRD:08208 CDRT4 - CMT1A duplicated region transcript 4 protein-coding Atac153_MAPQ30_peak_7225 chrX 135295716 135295716 + 3.83555 NA 3' UTR (NM_001173517, exon 18 of 18) 3' UTR (NM_001173517, exon 18 of 18) 16661 NM_001159699 2273 Hs.435369 NM_001449 HPRD:02157 FHL1 FHL-1|FHL1A|FHL1B|FLH1A|KYOT|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding Atac153_MAPQ30_peak_6619 chr9 36832220 36832220 + 3.83555 NA Intergenic Intergenic -8624 NR_039686 100616289 NR_039686 miRBase:MI0016827 MIR4475 - microRNA 4475 ncRNA Atac153_MAPQ30_peak_2685 chr17 6692268 6692268 + 3.83555 NA Intergenic Intergenic 12716 NM_153230 162517 Hs.368364 NM_153230 HPRD:16444 FBXO39 CT144|Fbx39 F-box protein 39 protein-coding Atac153_MAPQ30_peak_1412 chr11 134282947 134282947 + 3.83555 NA Intergenic Intergenic -1135 NM_018644 27087 Hs.381050 NM_018644 HPRD:06969 B3GAT1 CD57|GLCATP|GLCUATP|HNK1|LEU7|NK-1|NK1 beta-1,3-glucuronyltransferase 1 protein-coding Atac153_MAPQ30_peak_1123 chr11 20603459 20603459 + 3.83555 NA Intergenic Intergenic -17487 NM_004211 9152 Hs.136557 NM_004211 SLC6A5 GLYT-2|GLYT2|HKPX3|NET1 solute carrier family 6 (neurotransmitter transporter), member 5 protein-coding Atac153_MAPQ30_peak_1375 chr11 126355910 126355910 + 3.83555 NA intron (NM_001301097, intron 4 of 15) intron (NM_001301097, intron 4 of 15) 79833 NM_001254759 6484 Hs.591947 NM_006278 HPRD:00084 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding Atac153_MAPQ30_peak_5576 chr6 6367863 6367863 + 3.83555 NA intron (NR_026970, intron 5 of 7) intron (NR_026970, intron 5 of 7) -46939 NM_000129 2162 Hs.335513 NM_000129 HPRD:00604 F13A1 F13A coagulation factor XIII, A1 polypeptide protein-coding Atac153_MAPQ30_peak_2831 chr17 41782644 41782644 + 3.83555 NA Intergenic MIR3|SINE|MIR -43382 NM_001040002 4222 Hs.438 NM_004527 HPRD:02537 MEOX1 KFS2|MOX1 mesenchyme homeobox 1 protein-coding Atac153_MAPQ30_peak_434 chr1 175042357 175042357 + 3.83555 NA intron (NM_022093, intron 1 of 18) intron (NM_022093, intron 1 of 18) 5363 NM_022093 63923 Hs.156369 NM_022093 ENSG00000120332 TNN TN-W tenascin N protein-coding Atac153_MAPQ30_peak_6727 chr9 101079753 101079753 + 3.83555 NA intron (NM_005458, intron 13 of 18) MIR3|SINE|MIR -61750 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family, member 2 protein-coding Atac153_MAPQ30_peak_3118 chr18 56200267 56200267 + 3.83555 NA intron (NM_052947, intron 5 of 12) intron (NM_052947, intron 5 of 12) -81883 NR_039899 100616357 NR_039899 MIR3591 - microRNA 3591 ncRNA Atac153_MAPQ30_peak_2652 chr17 1829762 1829762 + 3.83555 NA Intergenic Intergenic 96489 NM_002945 6117 Hs.461925 NM_002945 HPRD:01565 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1, 70kDa protein-coding Atac153_MAPQ30_peak_4365 chr22 26338611 26338611 + 3.83555 NA intron (NM_032608, intron 34 of 43) MIR|SINE|MIR 200491 NM_032608 84700 Hs.417959 NM_032608 HPRD:09529 MYO18B - myosin XVIIIB protein-coding Atac153_MAPQ30_peak_7027 chrX 49524345 49524345 + 3.83555 NA Intergenic MSTA|LTR|ERVL-MaLR -63749 NM_003785 8712 Hs.128231 NM_003785 HPRD:02240 PAGE1 AL5|CT16.3|GAGE-9|GAGEB1|PAGE-1 P antigen family, member 1 (prostate associated) protein-coding Atac153_MAPQ30_peak_1656 chr12 114491785 114491785 + 3.83555 NA Intergenic L2c|LINE|L2 -87609 NM_001146699 9904 Hs.7482 NM_016196 HPRD:15225 RBM19 - RNA binding motif protein 19 protein-coding Atac153_MAPQ30_peak_1569 chr12 76104793 76104793 + 3.83555 NA Intergenic Intergenic -199375 NM_007043 11103 Hs.645517 NM_007043 HPRD:11027 KRR1 HRB2|RIP-1 KRR1, small subunit (SSU) processome component, homolog (yeast) protein-coding Atac153_MAPQ30_peak_3693 chr2 121450403 121450403 + 3.83555 NA Intergenic Intergenic -104464 NM_005270 2736 Hs.111867 NM_005270 HPRD:01312 GLI2 HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding Atac153_MAPQ30_peak_3598 chr2 86335317 86335317 + 3.83555 NA intron (NM_017952, intron 1 of 23) intron (NM_017952, intron 1 of 23) 2012 NM_017952 55037 Hs.323489 NM_017952 HPRD:08631 PTCD3 MRP-S39 pentatricopeptide repeat domain 3 protein-coding Atac153_MAPQ30_peak_5948 chr7 29868594 29868594 + 3.83555 NA intron (NM_001080529, intron 1 of 8) intron (NM_001080529, intron 1 of 8) 22424 NM_001080529 644150 Hs.380698 NM_001080529 ENSG00000122574 WIPF3 CR16 WAS/WASL interacting protein family, member 3 protein-coding Atac153_MAPQ30_peak_3343 chr19 51641348 51641348 + 3.83555 NA Intergenic Intergenic -4210 NM_001277201 27036 Hs.655393 NM_014385 HPRD:05102 SIGLEC7 AIRM1|CD328|CDw328|D-siglec|QA79|SIGLEC-7|SIGLEC19P|SIGLECP2|p75|p75/AIRM1 sialic acid binding Ig-like lectin 7 protein-coding Atac153_MAPQ30_peak_7106 chrX 76838774 76838774 + 3.83555 NA intron (NM_138270, intron 26 of 33) AluSz|SINE|Alu 129127 NM_003868 8823 Hs.666364 NM_003868 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding Atac153_MAPQ30_peak_5642 chr6 33832703 33832703 + 3.83555 NA Intergenic LTR28|LTR|ERV1 31981 NR_038989 100507584 Hs.547104 NR_038989 ENSG00000249346 LINC01016 - long intergenic non-protein coding RNA 1016 ncRNA Atac153_MAPQ30_peak_1529 chr12 54107993 54107993 + 3.83555 NA exon (NM_020898, exon 12 of 15) exon (NM_020898, exon 12 of 15) 13314 NR_026554 57658 Hs.156667 NM_020898 HPRD:13868 CALCOCO1 Cocoa|calphoglin calcium binding and coiled-coil domain 1 protein-coding Atac153_MAPQ30_peak_2950 chr17 76809991 76809991 + 3.83555 NA intron (NM_025090, intron 11 of 19) intron (NM_025090, intron 11 of 19) 26978 NM_025090 57602 Hs.464243 NM_025090 HPRD:07164 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding Atac153_MAPQ30_peak_1169 chr11 45346131 45346131 + 3.83555 NA Intergenic Intergenic -30791 NR_120557 101928812 Hs.444059 NR_120557 ENSG00000254427 LOC101928812 - uncharacterized LOC101928812 ncRNA Atac153_MAPQ30_peak_1210 chr11 62949344 62949344 + 3.83555 NA intron (NM_199352, intron 5 of 8) LTR79|LTR|ERVL -37651 NM_001136506 283238 Hs.375139 NM_173586 HPRD:14591 SLC22A24 NET46 solute carrier family 22, member 24 protein-coding Atac153_MAPQ30_peak_5116 chr4 84288325 84288325 + 3.83555 NA Intergenic Intergenic -32019 NM_006665 10855 Hs.44227 NM_006665 HPRD:05286 HPSE HPA|HPA1|HPR1|HPSE1|HSE1 heparanase protein-coding Atac153_MAPQ30_peak_7121 chrX 85577966 85577966 + 3.83555 NA intron (NM_001139515, intron 1 of 11) LTR25-int|LTR|ERV1 59995 NM_001139515 117154 Hs.86603 NM_053281 HPRD:06481 DACH2 - dachshund family transcription factor 2 protein-coding Atac153_MAPQ30_peak_313 chr1 108506807 108506807 + 3.83555 NA promoter-TSS (NR_046653) promoter-TSS (NR_046653) -258 NR_046653 100873946 Hs.568676 NR_046653 ENSG00000230489 VAV3-AS1 - VAV3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4376 chr22 27807415 27807415 + 3.83555 NA Intergenic MIR3|SINE|MIR 390071 NM_002430 4330 Hs.268515 NM_002430 HPRD:08862 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 meningioma (disrupted in balanced translocation) 1 protein-coding Atac153_MAPQ30_peak_2396 chr16 11583792 11583792 + 3.83555 NA Intergenic L1MC4a|LINE|L1 24676 NR_110907 101927131 Hs.569654 NR_110907 ENSG00000262999 LOC101927131 - uncharacterized LOC101927131 ncRNA Atac153_MAPQ30_peak_6918 chrX 16257964 16257964 + 3.83555 NA Intergenic MLT2E|LTR|ERVL 72360 NM_001277307 645864 Hs.632792 NM_001277307 ENSG00000182798 MAGEB17 - melanoma antigen family B, 17 protein-coding Atac153_MAPQ30_peak_1295 chr11 94057973 94057973 + 3.83555 NA Intergenic Intergenic 19170 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 FOLR4 Folbp3|JUNO folate receptor 4, delta (putative) protein-coding Atac153_MAPQ30_peak_4352 chr22 23507648 23507648 + 3.83555 NA Intergenic Intergenic -14904 NM_021574 613 Hs.517461 NM_004327 HPRD:01044 BCR ALL|BCR1|CML|D22S11|D22S662|PHL breakpoint cluster region protein-coding Atac153_MAPQ30_peak_472 chr1 201369617 201369617 + 3.83555 NA promoter-TSS (NM_005558) promoter-TSS (NM_005558) -948 NM_005558 3898 Hs.519035 NM_005558 HPRD:03815 LAD1 LadA ladinin 1 protein-coding Atac153_MAPQ30_peak_253 chr1 48993228 48993228 + 3.83555 NA Intergenic AluSc|SINE|Alu -55348 NM_019073 54558 Hs.538103 NM_019073 HPRD:15430 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding Atac153_MAPQ30_peak_5820 chr6 157924105 157924105 + 3.83555 NA intron (NM_153746, intron 1 of 8) MLT1L|LTR|ERVL-MaLR -26059 NR_037463 100500899 NR_037463 MIR3692 - microRNA 3692 ncRNA Atac153_MAPQ30_peak_4367 chr22 26527375 26527375 + 3.83555 NA Intergenic Intergenic -38065 NM_001184773 23544 Hs.194766 NM_021115 HPRD:08449 SEZ6L - seizure related 6 homolog (mouse)-like protein-coding Atac153_MAPQ30_peak_584 chr1 231351624 231351624 + 3.83555 NA 3' UTR (NM_001004342, exon 10 of 10) 3' UTR (NM_001004342, exon 10 of 10) -25295 NM_014236 8443 Hs.498028 NM_014236 HPRD:04120 GNPAT DAP-AT|DAPAT|DHAPAT glyceronephosphate O-acyltransferase protein-coding Atac153_MAPQ30_peak_1854 chr13 101436677 101436677 + 3.83555 NA intron (NR_047687, intron 2 of 7) L1MB7|LINE|L1 76098 NR_047687 100885778 Hs.602949 NR_047687 ENSG00000233009 NALCN-AS1 - NALCN antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4870 chr3 138829523 138829523 + 3.83555 NA intron (NR_026783, intron 2 of 2) intron (NR_026783, intron 2 of 2) 6496 NR_026783 60467 Hs.512673 NM_021812 HPRD:16559 BPESC1 NCRNA00187 blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4235 chr21 18947574 18947574 + 3.83555 NA intron (NM_001207066, intron 7 of 7) AluJb|SINE|Alu 37694 NM_006806 10950 Hs.473420 NM_006806 HPRD:10415 BTG3 ANA|TOB5|TOB55|TOFA BTG family, member 3 protein-coding Atac153_MAPQ30_peak_3323 chr19 46622048 46622048 + 3.83555 NA Intergenic L1M2a1|LINE|L1 5883 NM_207393 388555 Hs.365496 NM_207393 HPRD:17140 IGFL3 UNQ483 IGF-like family member 3 protein-coding Atac153_MAPQ30_peak_3922 chr2 236881595 236881595 + 3.83555 NA intron (NM_001037131, intron 13 of 17) intron (NM_001037131, intron 13 of 17) 195057 NM_001485 2637 Hs.184945 NM_001485 HPRD:03087 GBX2 - gastrulation brain homeobox 2 protein-coding Atac153_MAPQ30_peak_6708 chr9 96676335 96676335 + 3.83555 NA Intergenic Intergenic 41273 NM_021570 56033 Hs.164960 NM_021570 HPRD:16017 BARX1 - BARX homeobox 1 protein-coding Atac153_MAPQ30_peak_413 chr1 161235148 161235148 + 3.83555 NA intron (NM_001102566, intron 1 of 2) AluJo|SINE|Alu 6631 NM_001102566 654790 Hs.433150 NM_001102566 ENSG00000248485 PCP4L1 IQM1 Purkinje cell protein 4 like 1 protein-coding Atac153_MAPQ30_peak_1175 chr11 45845536 45845536 + 3.83555 NA Intergenic Intergenic 18895 NM_018389 55343 Hs.12211 NM_018389 HPRD:09324 SLC35C1 CDG2C|FUCT1 solute carrier family 35 (GDP-fucose transporter), member C1 protein-coding Atac153_MAPQ30_peak_2984 chr18 2921829 2921829 + 3.83555 NA intron (NM_014646, intron 17 of 19) intron (NM_014646, intron 17 of 19) 24792 NR_026659 727896 Hs.673126 NR_026659 LOC727896 - cysteine and histidine-rich domain (CHORD) containing 1 pseudogene pseudo Atac153_MAPQ30_peak_6465 chr8 121825844 121825844 + 3.83555 NA Intergenic Intergenic -1535 NM_021021 6641 Hs.46701 NM_021021 HPRD:02490 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) protein-coding Atac153_MAPQ30_peak_2426 chr16 19137077 19137077 + 3.83555 NA Intergenic MLT1H|LTR|ERVL-MaLR 11823 NR_028028 162073 Hs.530899 NM_001034841 HPRD:18743 ITPRIPL2 - inositol 1,4,5-trisphosphate receptor interacting protein-like 2 protein-coding Atac153_MAPQ30_peak_7032 chrX 50343945 50343945 + 3.83555 NA intron (NM_020717, intron 7 of 8) intron (NM_020717, intron 7 of 8) -130208 NM_001013742 139189 Hs.38132 NM_001013742 DGKK - diacylglycerol kinase, kappa protein-coding Atac153_MAPQ30_peak_1938 chr14 60517834 60517834 + 3.83555 NA intron (NR_075071, intron 29 of 32) L1PA11|LINE|L1 -40795 NM_022495 64430 Hs.509499 NM_022495 HPRD:16604 PCNXL4 C14orf135|FBP2 pecanex-like 4 (Drosophila) protein-coding Atac153_MAPQ30_peak_5350 chr5 81754798 81754798 + 3.83555 NA Intergenic L1PA16|LINE|L1 179517 NM_001017971 92270 Hs.729805 NM_001017971 HPRD:18710 ATP6AP1L - ATPase, H+ transporting, lysosomal accessory protein 1-like protein-coding Atac153_MAPQ30_peak_209 chr1 38674611 38674611 + 3.83555 NA TTS (NR_038928) TTS (NR_038928) 5828 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA Atac153_MAPQ30_peak_6763 chr9 116840220 116840220 + 3.83555 NA intron (NM_001633, intron 1 of 9) intron (NM_001633, intron 1 of 9) 532 NM_001633 259 Hs.436911 NM_001633 HPRD:01467 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding Atac153_MAPQ30_peak_6679 chr9 90941453 90941453 + 3.83555 NA Intergenic MER21C|LTR|ERVL -61844 NM_006717 10927 Hs.146804 NM_006717 HPRD:18096 SPIN1 SPIN spindlin 1 protein-coding Atac153_MAPQ30_peak_2657 chr17 2607516 2607516 + 3.83555 NA intron (NM_015229, intron 2 of 25) MIRc|SINE|MIR 7411 NM_015229 23277 Hs.22616 NM_015229 HPRD:10014 CLUH CLU1|KIAA0664 clustered mitochondria (cluA/CLU1) homolog protein-coding Atac153_MAPQ30_peak_3563 chr2 68925462 68925462 + 3.83555 NA Intergenic LTR71A|LTR|ERV1 -36451 NM_001007231 9938 Hs.531807 NM_014882 HPRD:09805 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding Atac153_MAPQ30_peak_5985 chr7 44806401 44806401 + 3.83555 NA intron (NM_001300959, intron 17 of 17) intron (NM_001300959, intron 17 of 17) 10614 NM_174929 83637 Hs.77978 NM_031449 HPRD:13225 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger, MIZ-type containing 2 protein-coding Atac153_MAPQ30_peak_5916 chr7 12578102 12578102 + 3.83555 NA Intergenic Intergenic -32101 NM_001112706 85477 Hs.633359 NM_033128 HPRD:11539 SCIN - scinderin protein-coding Atac153_MAPQ30_peak_737 chr10 46996479 46996479 + 3.83555 NA intron (NM_014696, intron 2 of 2) MIRb|SINE|MIR 2933 NM_014696 9721 Hs.523375 NM_014696 GPRIN2 GRIN2|KIAA0514 G protein regulated inducer of neurite outgrowth 2 protein-coding Atac153_MAPQ30_peak_1674 chr12 120139696 120139696 + 3.83555 NA exon (NM_007174, exon 41 of 47) exon (NM_007174, exon 41 of 47) 11833 NR_031589 100302274 NR_031589 MIR1178 MIRN1178|hsa-mir-1178 microRNA 1178 ncRNA Atac153_MAPQ30_peak_2766 chr17 21292404 21292404 + 3.83555 NA intron (NM_021012, intron 1 of 2) intron (NM_021012, intron 1 of 2) 12705 NM_021012 3768 Hs.200629 NM_021012 HPRD:09083 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium inwardly-rectifying channel, subfamily J, member 12 protein-coding Atac153_MAPQ30_peak_6212 chr7 154693534 154693534 + 3.83555 NA Intergenic MLT1F|LTR|ERVL-MaLR -26693 NR_024477 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1OS PAXIP1-AS2 PAXIP1 opposite strand ncRNA Atac153_MAPQ30_peak_4063 chr20 31616491 31616491 + 3.83555 NA Intergenic Intergenic -2963 NM_174897 128859 Hs.375090 NM_174897 HPRD:16561 BPIFB6 BPIL3|LPLUNC6 BPI fold containing family B, member 6 protein-coding Atac153_MAPQ30_peak_6775 chr9 119209197 119209197 + 3.83555 NA intron (NM_198187, intron 5 of 8) intron (NM_198187, intron 5 of 8) -46312 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4159 chr20 50457547 50457547 + 3.83555 NA intron (NR_110016, intron 2 of 2) intron (NR_110016, intron 2 of 2) 21905 NR_110016 101927678 Hs.683840 NR_110016 ENSG00000227964 LINC01429 - long intergenic non-protein coding RNA 1429 ncRNA Atac153_MAPQ30_peak_5434 chr5 142395149 142395149 + 3.83555 NA intron (NM_015071, intron 12 of 22) MLT1K|LTR|ERVL-MaLR -146674 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_911 chr10 112254582 112254582 + 3.83555 NA Intergenic Intergenic -3043 NM_004419 1847 Hs.2128 NM_004419 HPRD:04349 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding Atac153_MAPQ30_peak_3188 chr19 2633413 2633413 + 3.83555 NA intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) 69333 NM_052847 2788 Hs.515544 NM_052847 HPRD:07638 GNG7 - guanine nucleotide binding protein (G protein), gamma 7 protein-coding Atac153_MAPQ30_peak_2885 chr17 60226566 60226566 + 3.83555 NA Intergenic Intergenic -83923 NM_005121 9969 Hs.282678 NM_005121 HPRD:07229 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding Atac153_MAPQ30_peak_715 chr10 36083539 36083539 + 3.83555 NA intron (NR_110138, intron 1 of 2) intron (NR_110138, intron 1 of 2) 16309 NR_110138 102578074 NR_110138 LINC01452 PCAT5|TPCAT-10-36067 long intergenic non-protein coding RNA 1452 ncRNA Atac153_MAPQ30_peak_3799 chr2 174699195 174699195 + 3.83555 NA Intergenic HAL1|LINE|L1 129752 NM_001017371 6670 Hs.531587 NM_003111 HPRD:03483 SP3 SPR2 Sp3 transcription factor protein-coding Atac153_MAPQ30_peak_2673 chr17 4741312 4741312 + 3.83555 NA intron (NM_001024937, intron 1 of 31) intron (NM_001024937, intron 1 of 31) 4677 NM_153827 50488 Hs.443417 NM_015716 HPRD:11366 MINK1 B55|MAP4K6|MINK|YSK2|ZC3|hMINK|hMINKbeta misshapen-like kinase 1 protein-coding Atac153_MAPQ30_peak_4701 chr3 52850372 52850372 + 3.83555 NA intron (NM_002218, intron 21 of 23) intron (NM_002218, intron 21 of 23) -7579 NR_046615 100873993 Hs.602700 NR_046615 ITIH4-AS1 - ITIH4 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4629 chr3 38037051 38037051 + 3.83555 NA intron (NM_015873, intron 3 of 18) intron (NM_015873, intron 3 of 18) 1973 NM_015873 50853 Hs.103665 NM_015873 HPRD:18283 VILL - villin-like protein-coding Atac153_MAPQ30_peak_5682 chr6 42141500 42141500 + 3.83555 NA exon (NM_000409, exon 3 of 6) exon (NM_000409, exon 3 of 6) 18356 NM_000409 2978 Hs.92858 NM_000409 HPRD:02648 GUCA1A C6orf131|COD3|CORD14|GCAP|GCAP1|GUCA|GUCA1|dJ139D8.6 guanylate cyclase activator 1A (retina) protein-coding Atac153_MAPQ30_peak_5827 chr6 159175209 159175209 + 3.83555 NA intron (NM_001242395, intron 11 of 15) Charlie2a|DNA|hAT-Charlie 10576 NR_037482 100500851 NR_037482 miRBase:MI0016424 MIR3918 - microRNA 3918 ncRNA Atac153_MAPQ30_peak_6181 chr7 143068659 143068659 + 3.83555 NA Intergenic AluJo|SINE|Alu -8819 NM_001031690 9715 Hs.648908 NM_014690 HPRD:13816 FAM131B - family with sequence similarity 131, member B protein-coding Atac153_MAPQ30_peak_973 chr10 127667552 127667552 + 3.83555 NA intron (NM_145235, intron 1 of 10) L1PA12|LINE|L1 -5710 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2736 chr17 18010742 18010742 + 3.83555 NA 3' UTR (NM_001388, exon 13 of 13) 3' UTR (NM_001388, exon 13 of 13) -1278 NM_016239 51168 Hs.462390 NM_016239 HPRD:04049 MYO15A DFNB3|MYO15 myosin XVA protein-coding Atac153_MAPQ30_peak_6268 chr8 6918511 6918511 + 3.83555 NA Intergenic Intergenic -4252 NM_021010 1670 Hs.655233 NM_021010 HPRD:02720 DEFA5 DEF5|HD-5 defensin, alpha 5, Paneth cell-specific protein-coding Atac153_MAPQ30_peak_651 chr10 6026085 6026085 + 3.83555 NA Intergenic Intergenic -5935 NM_001243539 3601 Hs.445124 NM_002189 HPRD:03045 IL15RA CD215 interleukin 15 receptor, alpha protein-coding Atac153_MAPQ30_peak_381 chr1 154299618 154299618 + 3.83555 NA promoter-TSS (NM_020452) promoter-TSS (NM_020452) -658 NM_020452 57198 Hs.435700 NM_020452 HPRD:05794 ATP8B2 ATPID ATPase, aminophospholipid transporter, class I, type 8B, member 2 protein-coding Atac153_MAPQ30_peak_3973 chr20 1975684 1975684 + 3.83555 NA promoter-TSS (NM_001190899) promoter-TSS (NM_001190899) -753 NM_024411 5173 Hs.22584 NM_024411 HPRD:08838 PDYN ADCA|PENKB|SCA23 prodynorphin protein-coding Atac153_MAPQ30_peak_1595 chr12 99494700 99494700 + 3.83555 NA intron (NR_110095, intron 4 of 4) L2c|LINE|L2 7563 NR_110095 101928937 Hs.555499 NR_110095 ENSG00000258039 LOC101928937 - uncharacterized LOC101928937 ncRNA Atac153_MAPQ30_peak_4720 chr3 56844301 56844301 + 3.83555 NA intron (NM_001289698, intron 2 of 10) AluSz|SINE|Alu -8306 NM_019555 50650 Hs.476402 NM_019555 HPRD:12480 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor (GEF) 3 protein-coding Atac153_MAPQ30_peak_1131 chr11 31908135 31908135 + 3.83555 NA non-coding (NR_033971, exon 3 of 3) non-coding (NR_033971, exon 3 of 3) 60021 NR_117094 103157000 NR_117094 PAUPAR - PAX6 upstream antisense RNA ncRNA Atac153_MAPQ30_peak_5165 chr4 153457611 153457611 + 3.83555 NA promoter-TSS (NR_039658) promoter-TSS (NR_039658) 31 NR_039658 100616193 NR_039658 miRBase:MI0016799 MIR4453 - microRNA 4453 ncRNA Atac153_MAPQ30_peak_3566 chr2 70164062 70164062 + 3.83555 NA intron (NM_002357, intron 4 of 5) intron (NM_002357, intron 4 of 5) 21889 NM_001202513 4084 Hs.468908 NM_002357 HPRD:02487 MXD1 BHLHC58|MAD|MAD1 MAX dimerization protein 1 protein-coding Atac153_MAPQ30_peak_1681 chr12 121829651 121829651 + 3.83555 NA Intergenic AluSz|SINE|Alu -8235 NM_025126 80196 Hs.292804 NM_025126 HPRD:10509 RNF34 CARP-1|CARP1|RFI|RIF|RIFF|hRFI ring finger protein 34, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_5487 chr5 168728553 168728553 + 3.83555 NA promoter-TSS (NM_001271946) promoter-TSS (NM_001271946) -420 NM_003062 6586 Hs.552087 NM_003062 HPRD:04775 SLIT3 MEGF5|SLIL2|SLIT1|Slit-3|slit2 slit homolog 3 (Drosophila) protein-coding Atac153_MAPQ30_peak_1213 chr11 63854419 63854419 + 3.83555 NA intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -16943 NM_013280 23769 Hs.584876 NM_013280 HPRD:05311 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding Atac153_MAPQ30_peak_6768 chr9 117137361 117137361 + 3.83555 NA intron (NM_030767, intron 3 of 21) intron (NM_030767, intron 3 of 21) 19324 NM_030767 80709 Hs.494895 NM_030767 HPRD:16148 AKNA - AT-hook transcription factor protein-coding Atac153_MAPQ30_peak_3525 chr2 46716015 46716015 + 3.83555 NA Intergenic MER5B|DNA|hAT-Charlie 9311 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000187600 TMEM247 - transmembrane protein 247 protein-coding Atac153_MAPQ30_peak_6091 chr7 100551646 100551646 + 3.83455 NA exon (NM_005960, exon 2 of 13) exon (NM_005960, exon 2 of 13) 4594 NM_005960 4584 Hs.744422 NM_005960 MUC3A MUC-3A|MUC3 mucin 3A, cell surface associated protein-coding Atac153_MAPQ30_peak_6126 chr7 128773592 128773592 + 3.83455 NA Intergenic Intergenic 7267 NR_002144 407835 Hs.592273 NR_002144 LOC407835 - mitogen-activated protein kinase kinase 2 pseudogene pseudo Atac153_MAPQ30_peak_35 chr1 5730397 5730397 + 3.83455 NA Intergenic Intergenic 106266 NR_039612 100616489 NR_039612 miRBase:MI0016753 MIR4417 - microRNA 4417 ncRNA Atac153_MAPQ30_peak_1125 chr11 21027322 21027322 + 3.83455 NA intron (NM_001288713, intron 13 of 20) intron (NM_001288713, intron 13 of 20) 336225 NM_001288714 4745 Hs.657172 NM_006157 HPRD:09081 NELL1 IDH3GL|NRP1 NEL-like 1 (chicken) protein-coding Atac153_MAPQ30_peak_2157 chr15 50541346 50541346 + 3.83455 NA intron (NM_002112, intron 9 of 11) intron (NM_002112, intron 9 of 11) 16816 NM_002112 3067 Hs.1481 NM_002112 HPRD:00817 HDC - histidine decarboxylase protein-coding Atac153_MAPQ30_peak_7304 chrY 13472664 13472664 + 3.83455 NA Intergenic BSR/Beta|Satellite|Satellite 1060725 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_6401 chr8 72444002 72444002 + 3.83455 NA Intergenic Intergenic -169535 NM_001288574 2138 Hs.491997 NM_000503 HPRD:03388 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding Atac153_MAPQ30_peak_6640 chr9 75347797 75347797 + 3.83455 NA intron (NM_138691, intron 8 of 23) MIRb|SINE|MIR 141228 NR_121180 101927258 Hs.586433 NR_121120 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA Atac153_MAPQ30_peak_2764 chr17 21251062 21251062 + 3.83455 NA Intergenic L2a|LINE|L2 -28637 NM_021012 3768 Hs.200629 NM_021012 HPRD:09083 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium inwardly-rectifying channel, subfamily J, member 12 protein-coding Atac153_MAPQ30_peak_5714 chr6 65351580 65351580 + 3.83455 NA intron (NM_001292009, intron 22 of 43) MER1B|DNA|hAT-Charlie -659731 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding Atac153_MAPQ30_peak_837 chr10 85939048 85939048 + 3.83198 NA intron (NM_207373, intron 2 of 2) MIR|SINE|MIR 5494 NM_207373 387695 Hs.298713 NM_207373 HPRD:12599 C10orf99 UNQ1833 chromosome 10 open reading frame 99 protein-coding Atac153_MAPQ30_peak_1975 chr14 72351562 72351562 + 3.83198 NA Intergenic MER96|DNA|hAT -47255 NM_001204423 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP regulator of G-protein signaling 6 protein-coding Atac153_MAPQ30_peak_4311 chr21 45251370 45251370 + 3.83198 NA Intergenic Intergenic -18922 NR_026961 284837 Hs.592159 NM_194310 HPRD:11256 LOC284837 - uncharacterized LOC284837 ncRNA Atac153_MAPQ30_peak_3781 chr2 160542780 160542780 + 3.83198 NA Intergenic L1MC3|LINE|L1 26166 NR_110586 29994 Hs.470369 NM_013450 HPRD:09295 BAZ2B WALp4 bromodomain adjacent to zinc finger domain, 2B protein-coding Atac153_MAPQ30_peak_5217 chr5 1935553 1935553 + 3.83198 NA Intergenic L1ME2z|LINE|L1 48108 NR_109912 101929081 Hs.519180 NR_109912 ENSG00000249326 CTD-2194D22.4 - uncharacterized LOC101929081 ncRNA Atac153_MAPQ30_peak_694 chr10 25206175 25206175 + 3.83198 NA intron (NM_001282786, intron 3 of 7) MLT1L|LTR|ERVL-MaLR 35398 NM_020200 56952 Hs.405619 NM_020200 HPRD:17917 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding Atac153_MAPQ30_peak_5176 chr4 163820207 163820207 + 3.83198 NA Intergenic MER50|LTR|ERV1 267866 NM_138386 92345 Hs.129095 NM_138386 HPRD:10054 NAF1 - nuclear assembly factor 1 ribonucleoprotein protein-coding Atac153_MAPQ30_peak_5926 chr7 23959329 23959329 + 3.83198 NA Intergenic Intergenic 209384 NM_001260504 56164 Hs.309767 NM_031414 HPRD:10427 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding Atac153_MAPQ30_peak_5246 chr5 7427010 7427010 + 3.82415 NA intron (NM_020546, intron 2 of 24) intron (NM_020546, intron 2 of 24) 30667 NM_020546 108 Hs.481545 NM_020546 HPRD:00052 ADCY2 AC2|HBAC2 adenylate cyclase 2 (brain) protein-coding Atac153_MAPQ30_peak_532 chr1 215233379 215233379 + 3.82415 NA intron (NM_001017424, intron 1 of 6) intron (NM_001017424, intron 1 of 6) -23181 NM_001017425 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium channel, subfamily K, member 2 protein-coding Atac153_MAPQ30_peak_2158 chr15 51230730 51230730 + 3.82415 NA intron (NM_007347, intron 8 of 20) L1MDa|LINE|L1 -5596 NR_027642 100132724 Hs.730493 NR_027642 DCAF13P3 - DDB1 and CUL4 associated factor 13 pseudogene 3 pseudo Atac153_MAPQ30_peak_570 chr1 229419059 229419059 + 3.82415 NA intron (NM_001271998, intron 1 of 5) L1MD1|LINE|L1 12250 NR_073545 5867 Hs.296169 NM_004578 HPRD:01541 RAB4A HRES-1|HRES-1/RAB4|HRES1|RAB4 RAB4A, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_1666 chr12 115895438 115895438 + 3.81636 NA Intergenic Intergenic 691021 NR_030351 693205 NR_030351 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA Atac153_MAPQ30_peak_2450 chr16 25897850 25897850 + 3.81636 NA intron (NM_006040, intron 1 of 1) L3|LINE|CR1 194503 NM_006040 9951 Hs.655275 NM_006040 HPRD:04960 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 protein-coding Atac153_MAPQ30_peak_4039 chr20 24282442 24282442 + 3.81636 NA Intergenic MIR3|SINE|MIR 102039 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 FLJ33581 - uncharacterized LOC400839 ncRNA Atac153_MAPQ30_peak_2899 chr17 63706965 63706965 + 3.81636 NA intron (NM_001037325, intron 3 of 6) intron (NM_001037325, intron 3 of 6) 115696 NM_001037325 201134 Hs.408676 NM_145036 HPRD:11336 CEP112 CCDC46|MACOCO centrosomal protein 112kDa protein-coding Atac153_MAPQ30_peak_6577 chr9 4227459 4227459 + 3.81636 NA intron (NM_001042413, intron 2 of 10) intron (NM_001042413, intron 2 of 10) 72576 NM_001042413 169792 Hs.162125 NM_152629 HPRD:13582 GLIS3 ZNF515 GLIS family zinc finger 3 protein-coding Atac153_MAPQ30_peak_1286 chr11 80175595 80175595 + 3.81636 NA Intergenic L1PREC2|LINE|L1 298251 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LOC101928944 - uncharacterized LOC101928944 ncRNA Atac153_MAPQ30_peak_6477 chr8 126875405 126875405 + 3.81636 NA Intergenic Intergenic 88036 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA Atac153_MAPQ30_peak_1327 chr11 114808338 114808338 + 3.81636 NA Intergenic ERVL-B4-int|LTR|ERVL 259138 NM_182495 120406 Hs.446760 NM_182495 HPRD:08055 NXPE2 FAM55B neurexophilin and PC-esterase domain family, member 2 protein-coding Atac153_MAPQ30_peak_5235 chr5 5423364 5423364 + 3.81636 NA intron (NM_015325, intron 1 of 18) intron (NM_015325, intron 1 of 18) 578 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongator complex ELL subunit 1 protein-coding Atac153_MAPQ30_peak_2005 chr14 79554561 79554561 + 3.81636 NA intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -191121 NM_138970 9369 Hs.368307 NM_004796 NRXN3 C14orf60 neurexin 3 protein-coding Atac153_MAPQ30_peak_1333 chr11 115984160 115984160 + 3.81636 NA Intergenic Intergenic -353242 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA Atac153_MAPQ30_peak_426 chr1 167106853 167106853 + 3.81636 NA Intergenic Intergenic 42766 NM_001080426 92235 Hs.632462 NM_001080426 ENSG00000198842 DUSP27 - dual specificity phosphatase 27 (putative) protein-coding Atac153_MAPQ30_peak_5475 chr5 164955332 164955332 + 3.81636 NA Intergenic THE1C-int|LTR|ERVL-MaLR 1058047 NR_105065 102546299 Hs.437730 NR_105065 LOC102546299 - uncharacterized LOC102546299 ncRNA Atac153_MAPQ30_peak_5206 chr4 190590559 190590559 + 3.78880 NA Intergenic L2a|LINE|L2 9799 NR_121679 101928971 Hs.519164 NR_121679 ENSG00000250739 LINC01262 TCONS_l2_00021807 long intergenic non-protein coding RNA 1262 ncRNA Atac153_MAPQ30_peak_5382 chr5 120745186 120745186 + 3.75802 NA Intergenic Intergenic 86941 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA Atac153_MAPQ30_peak_5205 chr4 190506971 190506971 + 3.74649 NA Intergenic Intergenic -73789 NR_121679 101928971 Hs.519164 NR_121679 ENSG00000250739 LINC01262 TCONS_l2_00021807 long intergenic non-protein coding RNA 1262 ncRNA Atac153_MAPQ30_peak_3616 chr2 91815010 91815010 + 3.74649 NA Intergenic Intergenic 32965 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_5814 chr6 151400023 151400023 + 3.73935 NA intron (NM_001242768, intron 26 of 27) intron (NM_001242768, intron 26 of 27) -161111 NM_005100 9590 Hs.371240 NM_005100 HPRD:05263 AKAP12 AKAP250|SSeCKS A kinase (PRKA) anchor protein 12 protein-coding Atac153_MAPQ30_peak_4121 chr20 43810842 43810842 + 3.73935 NA Intergenic Intergenic 7302 NM_002638 5266 Hs.112341 NM_002638 HPRD:15947 PI3 ESI|SKALP|WAP3|WFDC14|cementoin peptidase inhibitor 3, skin-derived protein-coding Atac153_MAPQ30_peak_6271 chr8 9240665 9240665 + 3.73935 NA Intergenic Intergenic 58104 NR_040039 157273 Hs.650222 NR_040039 ENSG00000254235 LOC157273 - uncharacterized LOC157273 ncRNA Atac153_MAPQ30_peak_2800 chr17 32639540 32639540 + 3.73935 NA Intergenic MLT1I|LTR|ERVL-MaLR -6526 NM_005623 6355 Hs.271387 NM_005623 HPRD:03791 CCL8 HC14|MCP-2|MCP2|SCYA10|SCYA8 chemokine (C-C motif) ligand 8 protein-coding Atac153_MAPQ30_peak_1130 chr11 31168432 31168432 + 3.73935 NA Intergenic Intergenic -154199 NM_020869 100506627 Hs.530438 NM_020869 DCDC5 - doublecortin domain containing 5 protein-coding Atac153_MAPQ30_peak_5503 chr5 173455528 173455528 + 3.73935 NA Intergenic L1MEg|LINE|L1 -17079 NM_015980 51617 Hs.559412 NM_015980 HPRD:13664 HMP19 - HMP19 protein protein-coding Atac153_MAPQ30_peak_3811 chr2 180216155 180216155 + 3.73935 NA Intergenic Intergenic -86805 NM_178123 91404 Hs.30977 NM_178123 HPRD:11549 SESTD1 SOLO SEC14 and spectrin domains 1 protein-coding Atac153_MAPQ30_peak_5161 chr4 150139798 150139798 + 3.73935 NA Intergenic L1PA14|LINE|L1 -776126 NM_001166104 4306 Hs.163924 NM_000901 HPRD:02991 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3, group C, member 2 protein-coding Atac153_MAPQ30_peak_6161 chr7 135920780 135920780 + 3.73935 NA Intergenic Intergenic -258576 NM_001128619 767558 Hs.602015 NM_001128619 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding Atac153_MAPQ30_peak_5575 chr6 6352465 6352465 + 3.73935 NA intron (NR_026970, intron 6 of 7) AluJr|SINE|Alu -31541 NM_000129 2162 Hs.335513 NM_000129 HPRD:00604 F13A1 F13A coagulation factor XIII, A1 polypeptide protein-coding Atac153_MAPQ30_peak_1936 chr14 59445179 59445179 + 3.73935 NA intron (NR_110547, intron 4 of 5) intron (NR_110547, intron 4 of 5) 150173 NR_110547 102723742 Hs.232734 NR_110547 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA Atac153_MAPQ30_peak_6604 chr9 28270354 28270354 + 3.73935 NA intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) 448949 NM_152570 158038 Hs.662661 NM_152570 HPRD:08715 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding Atac153_MAPQ30_peak_3587 chr2 75881103 75881103 + 3.73935 NA intron (NM_014763, intron 4 of 5) L2|LINE|L2 7194 NM_014763 9801 Hs.44024 NM_014763 MRPL19 L19mt|MRP-L15|MRP-L19|MRPL15|RLX1|RPML15 mitochondrial ribosomal protein L19 protein-coding Atac153_MAPQ30_peak_1584 chr12 94487016 94487016 + 3.73935 NA Intergenic Intergenic -55483 NM_005761 10154 Hs.584845 NM_005761 HPRD:05036 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding Atac153_MAPQ30_peak_4738 chr3 64366780 64366780 + 3.73935 NA Intergenic MIRb|SINE|MIR -155649 NM_198859 166336 Hs.148105 NM_198859 HPRD:16342 PRICKLE2 EPM5 prickle homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_856 chr10 90711542 90711542 + 3.73935 NA intron (NM_001141945, intron 1 of 8) intron (NM_001141945, intron 1 of 8) 1038 NM_001613 59 Hs.500483 NM_001613 HPRD:00031 ACTA2 AAT6|ACTSA|MYMY5 actin, alpha 2, smooth muscle, aorta protein-coding Atac153_MAPQ30_peak_1756 chr13 21159101 21159101 + 3.73935 NA intron (NM_175605, intron 5 of 27) MER20|DNA|hAT-Charlie 17893 NM_175605 8100 Hs.187376 NM_006531 HPRD:09000 IFT88 D13S1056E|DAF19|TG737|TTC10|hTg737 intraflagellar transport 88 protein-coding Atac153_MAPQ30_peak_5183 chr4 169427316 169427316 + 3.73935 NA intron (NM_016081, intron 1 of 20) L2a|LINE|L2 9099 NM_016081 23022 Hs.151220 NM_016081 HPRD:09731 PALLD CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding Atac153_MAPQ30_peak_6335 chr8 34260373 34260373 + 3.69306 NA Intergenic Intergenic -381066 NR_125746 103689844 Hs.590682 NR_125746 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA Atac153_MAPQ30_peak_5819 chr6 157528419 157528419 + 3.69306 NA exon (NM_017519, exon 19 of 19) exon (NM_017519, exon 19 of 19) 216872 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding Atac153_MAPQ30_peak_3648 chr2 105011304 105011304 + 3.66371 NA intron (NR_037885, intron 1 of 2) intron (NR_037885, intron 1 of 2) 13486 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA Atac153_MAPQ30_peak_5921 chr7 22178678 22178678 + 3.66371 NA intron (NM_012294, intron 21 of 25) MLT1M|LTR|ERVL-MaLR -193136 NM_001127370 55536 Hs.744069 NM_018719 HPRD:11481 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7-like protein-coding Atac153_MAPQ30_peak_2317 chr15 92083536 92083536 + 3.66371 NA Intergenic Intergenic 76967 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 LOC101926928 - uncharacterized LOC101926928 ncRNA Atac153_MAPQ30_peak_2844 chr17 45262115 45262115 + 3.66371 NA intron (NM_001293089, intron 1 of 18) intron (NM_001293089, intron 1 of 18) 4563 NM_001293091 996 Hs.463295 NM_001256 HPRD:00304 CDC27 ANAPC3|APC3|CDC27Hs|D0S1430E|D17S978E|H-NUC|HNUC|NUC2 cell division cycle 27 protein-coding Atac153_MAPQ30_peak_1498 chr12 42355826 42355826 + 3.66371 NA Intergenic Intergenic 182847 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding Atac153_MAPQ30_peak_4803 chr3 121210600 121210600 + 3.66371 NA intron (NM_199420, intron 15 of 29) L1MEb|LINE|L1 54253 NM_199420 10721 Hs.241517 NM_199420 HPRD:10375 POLQ POLH|PRO0327 polymerase (DNA directed), theta protein-coding Atac153_MAPQ30_peak_2763 chr17 21247512 21247512 + 3.66371 NA Intergenic Intergenic -32187 NM_021012 3768 Hs.200629 NM_021012 HPRD:09083 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium inwardly-rectifying channel, subfamily J, member 12 protein-coding Atac153_MAPQ30_peak_5186 chr4 174264691 174264691 + 3.66371 NA Intergenic MIR|SINE|MIR -9096 NM_002129 3148 Hs.434953 NM_002129 HMGB2 HMG2 high mobility group box 2 protein-coding Atac153_MAPQ30_peak_1842 chr13 95615815 95615815 + 3.66371 NA Intergenic Intergenic 202620 NR_110754 101927284 Hs.551673 NR_110754 LOC101927284 - uncharacterized LOC101927284 ncRNA Atac153_MAPQ30_peak_3402 chr2 9168152 9168152 + 3.66371 NA Intergenic MIRb|SINE|MIR -24276 NM_138799 129642 Hs.467634 NM_138799 MBOAT2 LPCAT4|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding Atac153_MAPQ30_peak_5437 chr5 145641255 145641255 + 3.66371 NA exon (NM_018989, exon 13 of 21) exon (NM_018989, exon 13 of 21) 58092 NM_018989 54439 Hs.61441 NM_018989 ENSG00000091009 RBM27 ARRS1|Psc1|ZC3H18 RNA binding motif protein 27 protein-coding Atac153_MAPQ30_peak_2300 chr15 89001985 89001985 + 3.66371 NA TTS (NM_022163) TTS (NM_022163) 8648 NM_022163 26589 Hs.534261 NM_022163 HPRD:14765 MRPL46 C15orf4|LIECG2|P2ECSL mitochondrial ribosomal protein L46 protein-coding Atac153_MAPQ30_peak_5809 chr6 149610435 149610435 + 3.66371 NA intron (NM_001292035, intron 1 of 5) AluJr4|SINE|Alu -28679 NM_001292034 23118 Hs.269775 NM_015093 HPRD:05483 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 protein-coding Atac153_MAPQ30_peak_4531 chr3 3291649 3291649 + 3.66371 NA Intergenic Intergenic -70248 NM_001173482 51185 Hs.18925 NM_016302 HPRD:16750 CRBN MRT2|MRT2A cereblon protein-coding Atac153_MAPQ30_peak_6600 chr9 22287003 22287003 + 3.66371 NA Intergenic MIRb|SINE|MIR -159837 NM_022160 63951 Hs.371976 NM_022160 DMRTA1 DMO|DMRT4 DMRT-like family A1 protein-coding Atac153_MAPQ30_peak_5173 chr4 158948846 158948846 + 3.66371 NA Intergenic L1PA13|LINE|L1 144872 NM_016613 51313 Hs.567498 NM_016613 HPRD:13194 FAM198B AD036|C4orf18 family with sequence similarity 198, member B protein-coding Atac153_MAPQ30_peak_302 chr1 91965722 91965722 + 3.62871 NA promoter-TSS (NM_001134419) promoter-TSS (NM_001134419) -682 NM_003503 8317 Hs.533573 NM_003503 HPRD:10345 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding Atac153_MAPQ30_peak_5722 chr6 79556625 79556625 + 3.62871 NA Intergenic Intergenic -20636 NM_001010844 134728 Hs.656212 NM_001010844 HPRD:17157 IRAK1BP1 AIP70|SIMPL interleukin-1 receptor-associated kinase 1 binding protein 1 protein-coding Atac153_MAPQ30_peak_3845 chr2 207350411 207350411 + 3.59283 NA intron (NM_003812, intron 3 of 25) L2b|LINE|L2 42043 NM_003812 8745 Hs.370287 NM_003812 HPRD:04752 ADAM23 MDC-3|MDC3 ADAM metallopeptidase domain 23 protein-coding Atac153_MAPQ30_peak_6333 chr8 32055047 32055047 + 3.58949 NA intron (NM_013962, intron 1 of 4) MIR3|SINE|MIR 171313 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_441 chr1 177385319 177385319 + 3.58949 NA Intergenic MLT1A0|LTR|ERVL-MaLR 244686 NM_021165 57795 Hs.495918 NM_021165 HPRD:13891 BRINP2 DBCCR1L2|FAM5B bone morphogenetic protein/retinoic acid inducible neural-specific 2 protein-coding Atac153_MAPQ30_peak_1857 chr13 102077324 102077324 + 3.58949 NA Intergenic Intergenic -8511 NM_052867 259232 Hs.525146 NM_052867 HPRD:15647 NALCN CanIon|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding Atac153_MAPQ30_peak_6658 chr9 84105334 84105334 + 3.58949 NA Intergenic Intergenic 198262 NM_005077 7088 Hs.197320 NM_005077 HPRD:02557 TLE1 ESG|ESG1|GRG1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) protein-coding Atac153_MAPQ30_peak_3614 chr2 91806500 91806500 + 3.58949 NA Intergenic L2a|LINE|L2 41475 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_2155 chr15 48842306 48842306 + 3.58949 NA intron (NM_000138, intron 6 of 65) MIR3|SINE|MIR 95679 NM_000138 2200 Hs.591133 NM_000138 HPRD:00618 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding Atac153_MAPQ30_peak_5699 chr6 46064297 46064297 + 3.58949 NA Intergenic MLT1F|LTR|ERVL-MaLR -16212 NM_001114086 53405 Hs.485489 NM_016929 HPRD:06292 CLIC5 MST130|MSTP130 chloride intracellular channel 5 protein-coding Atac153_MAPQ30_peak_435 chr1 175341037 175341037 + 3.58949 NA intron (NM_003285, intron 9 of 22) intron (NM_003285, intron 9 of 22) -178808 NM_001162894 9674 Hs.518138 NM_014656 HPRD:13776 KIAA0040 - KIAA0040 protein-coding Atac153_MAPQ30_peak_2177 chr15 59492573 59492573 + 3.56488 NA intron (NM_004998, intron 16 of 27) intron (NM_004998, intron 16 of 27) -6442 NM_033195 92483 Hs.307052 NM_033195 HPRD:13981 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A-like 6B protein-coding Atac153_MAPQ30_peak_5792 chr6 136731615 136731615 + 3.56488 NA intron (NM_003980, intron 3 of 17) intron (NM_003980, intron 3 of 17) 56398 NM_001198615 9053 Hs.486548 NM_003980 HPRD:04982 MAP7 E-MAP-115|EMAP115 microtubule-associated protein 7 protein-coding Atac153_MAPQ30_peak_6405 chr8 75603677 75603677 + 3.56488 NA intron (NR_033830, intron 2 of 5) LTR16A|LTR|ERVL -14251 NR_031744 100302260 NR_031744 MIR2052 hsa-mir-2052 microRNA 2052 ncRNA Atac153_MAPQ30_peak_4026 chr20 22240216 22240216 + 3.56488 NA Intergenic Intergenic 23223 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA Atac153_MAPQ30_peak_977 chr10 128324911 128324911 + 3.56488 NA Intergenic Intergenic -114901 NM_001004298 118611 Hs.587663 NM_001004298 HPRD:16587 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding Atac153_MAPQ30_peak_1268 chr11 74562766 74562766 + 3.56488 NA intron (NM_001270380, intron 10 of 14) MIRb|SINE|MIR 97466 NM_001270380 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding Atac153_MAPQ30_peak_375 chr1 152734352 152734352 + 3.56488 NA 3' UTR (NM_001025231, exon 2 of 2) 3' UTR (NM_001025231, exon 2 of 2) 3846 NM_001025231 448834 Hs.149386 NM_001025231 ENSG00000203786 KPRP C1orf45 keratinocyte proline-rich protein protein-coding Atac153_MAPQ30_peak_1115 chr11 19214047 19214047 + 3.56488 NA intron (NM_003476, intron 2 of 6) intron (NM_003476, intron 2 of 6) 18071 NM_003476 8048 Hs.83577 NM_003476 HPRD:07525 CSRP3 CLP|CMD1M|CMH12|CRP3|LMO4|MLP cysteine and glycine-rich protein 3 (cardiac LIM protein) protein-coding Atac153_MAPQ30_peak_4940 chr3 187500275 187500275 + 3.56488 NA Intergenic MIRc|SINE|MIR -36762 NM_001706 604 Hs.478588 NM_001706 HPRD:00180 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 B-cell CLL/lymphoma 6 protein-coding Atac153_MAPQ30_peak_4607 chr3 31712353 31712353 + 3.56488 NA exon (NM_001174060, exon 8 of 11) exon (NM_001174060, exon 8 of 11) -33352 NR_049771 100874206 Hs.662428 NR_049771 ENSG00000232490 OSBPL10-AS1 - OSBPL10 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2132 chr15 40159352 40159352 + 3.56488 NA intron (NM_001271854, intron 1 of 3) intron (NM_001271854, intron 1 of 3) -37875 NM_001271855 11245 Hs.37196 NM_007223 HPRD:13597 GPR176 HB-954 G protein-coupled receptor 176 protein-coding Atac153_MAPQ30_peak_44 chr1 7434302 7434302 + 3.56488 NA intron (NM_015215, intron 5 of 22) intron (NM_015215, intron 5 of 22) -397027 NM_004781 9341 Hs.66708 NM_004781 HPRD:04711 VAMP3 CEB vesicle-associated membrane protein 3 protein-coding Atac153_MAPQ30_peak_5180 chr4 166760980 166760980 + 3.56488 NA Intergenic Intergenic -33430 NM_001204760 7092 Hs.106513 NM_012464 HPRD:07074 TLL1 ASD6|TLL tolloid-like 1 protein-coding Atac153_MAPQ30_peak_1798 chr13 39262768 39262768 + 3.51941 NA exon (NM_207361, exon 1 of 24) exon (NM_207361, exon 1 of 24) 1595 NM_207361 341640 Hs.253994 NM_207361 HPRD:10602 FREM2 - FRAS1 related extracellular matrix protein 2 protein-coding Atac153_MAPQ30_peak_3369 chr2 1028751 1028751 + 3.51941 NA intron (NM_018968, intron 1 of 16) MSTA|LTR|ERVL-MaLR 82197 NM_018968 54221 Hs.595069 NM_018968 HPRD:16374 SNTG2 G2SYN|SYN5 syntrophin, gamma 2 protein-coding Atac153_MAPQ30_peak_5804 chr6 145828552 145828552 + 3.51941 NA Intergenic L1PA15-16|LINE|L1 -227453 NR_038246 100507557 Hs.124537 NR_038244 ENSG00000235652 LOC100507557 - uncharacterized LOC100507557 ncRNA Atac153_MAPQ30_peak_5803 chr6 145794046 145794046 + 3.51941 NA Intergenic L1M1|LINE|L1 -261959 NR_038246 100507557 Hs.124537 NR_038244 ENSG00000235652 LOC100507557 - uncharacterized LOC100507557 ncRNA Atac153_MAPQ30_peak_4802 chr3 120410660 120410660 + 3.51941 NA intron (NM_173825, intron 6 of 7) intron (NM_173825, intron 6 of 7) -9242 NM_000187 3081 Hs.368254 NM_000187 HPRD:06315 HGD AKU|HGO homogentisate 1,2-dioxygenase protein-coding Atac153_MAPQ30_peak_1469 chr12 23529025 23529025 + 3.51941 NA Intergenic L1PA17|LINE|L1 200455 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA Atac153_MAPQ30_peak_1826 chr13 61989286 61989286 + 3.51941 NA exon (NM_022843, exon 1 of 2) exon (NM_022843, exon 1 of 2) 369 NM_022843 64881 Hs.391781 NM_022843 ENSG00000197991 PCDH20 PCDH13 protocadherin 20 protein-coding Atac153_MAPQ30_peak_2109 chr15 27809322 27809322 + 3.51941 NA Intergenic Intergenic -402856 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 LOC101928869 - uncharacterized LOC101928869 ncRNA Atac153_MAPQ30_peak_6242 chr8 1374603 1374603 + 3.51941 NA Intergenic Intergenic -74929 NM_001277161 9228 Hs.113287 NM_004745 HPRD:09258 DLGAP2 DAP2|SAPAP2 discs, large (Drosophila) homolog-associated protein 2 protein-coding Atac153_MAPQ30_peak_3824 chr2 198683738 198683738 + 3.51941 NA intron (NM_006226, intron 1 of 5) LTR78B|LTR|ERV1 14312 NM_006226 5334 Hs.153322 NM_006226 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C-like 1 protein-coding Atac153_MAPQ30_peak_1099 chr11 15406098 15406098 + 3.51941 NA Intergenic Intergenic 235450 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - inscuteable homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_5141 chr4 119720556 119720556 + 3.51941 NA intron (NM_014822, intron 7 of 22) L2a|LINE|L2 36770 NM_014822 9871 Hs.189641 NM_014822 HPRD:06218 SEC24D - SEC24 family member D protein-coding Atac153_MAPQ30_peak_4805 chr3 121966871 121966871 + 3.51941 NA intron (NM_001178065, intron 1 of 6) intron (NM_001178065, intron 1 of 6) 63690 NM_001178065 846 Hs.435615 NM_000388 HPRD:03122 CASR CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1 calcium-sensing receptor protein-coding Atac153_MAPQ30_peak_4871 chr3 138899301 138899301 + 3.51941 NA Intergenic L1MA9|LINE|L1 53063 NR_027070 140464 Hs.721270 NR_027070 PISRT1 NCRNA00195 polled intersex syndrome regulated transcript 1 (non-protein coding RNA) ncRNA Atac153_MAPQ30_peak_3807 chr2 177655977 177655977 + 3.51941 NA Intergenic Intergenic 153495 NR_110599 102724224 Hs.663125 NR_110599 LOC102724224 - uncharacterized LOC102724224 ncRNA Atac153_MAPQ30_peak_3258 chr19 27732099 27732099 + 3.49583 NA Intergenic ALR/Alpha|Satellite|centr -552276 NR_110688 101927151 Hs.567934 NR_110687 LOC101927151 - uncharacterized LOC101927151 ncRNA Atac153_MAPQ30_peak_364 chr1 144013621 144013621 + 3.44778 NA Intergenic Intergenic -100461 NM_001287385 554282 NM_001287385 FAM72C - family with sequence similarity 72, member C protein-coding Atac153_MAPQ30_peak_4895 chr3 157121878 157121878 + 3.44735 NA intron (NM_001167911, intron 6 of 12) intron (NM_001167911, intron 6 of 12) -32702 NM_002852 5806 Hs.591286 NM_002852 HPRD:03928 PTX3 TNFAIP5|TSG-14 pentraxin 3, long protein-coding Atac153_MAPQ30_peak_5251 chr5 8418158 8418158 + 3.44735 NA intron (NR_039984, intron 2 of 5) intron (NR_039984, intron 2 of 5) 39519 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LOC729506 - uncharacterized LOC729506 ncRNA Atac153_MAPQ30_peak_4771 chr3 86980801 86980801 + 3.44735 NA Intergenic Arthur1B|DNA|hAT-Tip100 59456 NM_016206 389136 Hs.606507 NM_016206 HPRD:13431 VGLL3 VGL-3|VGL3 vestigial-like family member 3 protein-coding Atac153_MAPQ30_peak_6336 chr8 34917900 34917900 + 3.44735 NA Intergenic L1PB2|LINE|L1 -175075 NM_080872 137970 Hs.238889 NM_080872 HPRD:11661 UNC5D PRO34692|Unc5h4 unc-5 homolog D (C. elegans) protein-coding Atac153_MAPQ30_peak_5065 chr4 40799639 40799639 + 3.44735 NA intron (NM_024677, intron 9 of 11) L2a|LINE|L2 47725 NM_024677 79730 Hs.570821 NM_024677 HPRD:07846 NSUN7 - NOP2/Sun domain family, member 7 protein-coding Atac153_MAPQ30_peak_5185 chr4 170917302 170917302 + 3.44735 NA intron (NM_021647, intron 2 of 2) intron (NM_021647, intron 2 of 2) 7633 NM_001009554 9848 Hs.593942 NM_021647 HPRD:14391 MFAP3L NYD-sp9 microfibrillar-associated protein 3-like protein-coding Atac153_MAPQ30_peak_2297 chr15 87559909 87559909 + 3.44735 NA intron (NM_152336, intron 23 of 23) L1PA11|LINE|L1 -560251 NR_026869 145978 Hs.350808 NM_152454 HPRD:08101 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA Atac153_MAPQ30_peak_5577 chr6 6482260 6482260 + 3.44735 NA intron (NR_026970, intron 3 of 7) intron (NR_026970, intron 3 of 7) -106674 NM_004271 9450 Hs.653138 NM_004271 LY86 MD-1|MMD-1|dJ80N2.1 lymphocyte antigen 86 protein-coding Atac153_MAPQ30_peak_1917 chr14 51449269 51449269 + 3.44735 NA intron (NM_015163, intron 7 of 9) intron (NM_015163, intron 7 of 9) -38021 NM_002863 5836 Hs.282417 NM_002863 HPRD:01987 PYGL GSD6 phosphorylase, glycogen, liver protein-coding Atac153_MAPQ30_peak_6070 chr7 82748577 82748577 + 3.44735 NA intron (NM_033026, intron 3 of 24) L1MA3|LINE|L1 43620 NM_014510 27445 Hs.12376 NM_014510 HPRD:16078 PCLO ACZ piccolo presynaptic cytomatrix protein protein-coding Atac153_MAPQ30_peak_5352 chr5 84543968 84543968 + 3.44735 NA Intergenic HERVL-int|LTR|ERVL -863283 NM_001278642 10085 Hs.482730 NM_005711 HPRD:09350 EDIL3 DEL1 EGF-like repeats and discoidin I-like domains 3 protein-coding Atac153_MAPQ30_peak_450 chr1 180390267 180390267 + 3.44294 NA intron (NM_032360, intron 4 of 7) L1PA11|LINE|L1 17258 NR_036067 100423032 NR_036067 MIR3121 - microRNA 3121 ncRNA Atac153_MAPQ30_peak_5771 chr6 120508672 120508672 + 3.37620 NA Intergenic Intergenic -696205 NR_046100 285762 Hs.571063 NR_046100 LOC285762 - uncharacterized LOC285762 ncRNA Atac153_MAPQ30_peak_3850 chr2 210587706 210587706 + 3.37620 NA intron (NM_002374, intron 12 of 14) intron (NM_002374, intron 12 of 14) -49011 NM_182587 285175 Hs.396201 NM_032504 HPRD:12809 UNC80 C2orf21|UNC-80 unc-80 homolog (C. elegans) protein-coding Atac153_MAPQ30_peak_6320 chr8 25565235 25565235 + 3.37620 NA Intergenic Intergenic 248722 NM_152562 157313 Hs.33366 NM_152562 HPRD:13014 CDCA2 PPP1R81|Repo-Man cell division cycle associated 2 protein-coding Atac153_MAPQ30_peak_5363 chr5 105062133 105062133 + 3.37620 NA Intergenic L1P4a|LINE|L1 626958 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo Atac153_MAPQ30_peak_1841 chr13 95457313 95457313 + 3.37620 NA intron (NR_110754, intron 2 of 4) intron (NR_110754, intron 2 of 4) 44118 NR_110754 101927284 Hs.551673 NR_110754 LOC101927284 - uncharacterized LOC101927284 ncRNA Atac153_MAPQ30_peak_4021 chr20 20019653 20019653 + 3.37620 NA intron (NM_001278625, intron 12 of 14) intron (NM_001278625, intron 12 of 14) 13483 NM_001278628 51340 Hs.171342 NM_016652 HPRD:09898 CRNKL1 CLF|CRN|Clf1|HCRN|MSTP021|SYF3 crooked neck pre-mRNA splicing factor 1 protein-coding Atac153_MAPQ30_peak_530 chr1 214484672 214484672 + 3.37620 NA intron (NM_020197, intron 2 of 11) intron (NM_020197, intron 2 of 11) 30107 NM_020197 56950 Hs.66170 NM_020197 HPRD:15406 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding Atac153_MAPQ30_peak_5296 chr5 35771509 35771509 + 3.37620 NA intron (NM_024867, intron 26 of 36) intron (NM_024867, intron 26 of 36) -85468 NM_002185 3575 Hs.591742 NM_002185 HPRD:00893 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding Atac153_MAPQ30_peak_4938 chr3 187338403 187338403 + 3.37620 NA Intergenic Intergenic 49798 NM_001048 6750 Hs.12409 NM_001048 HPRD:08920 SST SMST somatostatin protein-coding Atac153_MAPQ30_peak_2828 chr17 41463846 41463846 + 3.32942 NA intron (NR_027413, intron 1 of 3) intron (NR_027413, intron 1 of 3) 2420 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA Atac153_MAPQ30_peak_720 chr10 42399362 42399362 + 3.32942 NA Intergenic ALR/Alpha|Satellite|centr 464131 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo Atac153_MAPQ30_peak_7296 chrY 9984848 9984848 + 3.32942 NA Intergenic Intergenic 236441 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 (non-protein coding) ncRNA Atac153_MAPQ30_peak_6467 chr8 123268838 123268838 + 3.31945 NA Intergenic Intergenic -525063 NM_014943 22882 Hs.377090 NM_014943 HPRD:16458 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding Atac153_MAPQ30_peak_6406 chr8 75735560 75735560 + 3.31945 NA Intergenic Intergenic -1212 NM_015886 51050 Hs.98558 NM_015886 HPRD:06150 PI15 CRISP8|P24TI|P25TI peptidase inhibitor 15 protein-coding Atac153_MAPQ30_peak_2296 chr15 87198120 87198120 + 3.30652 NA intron (NM_152336, intron 21 of 23) intron (NM_152336, intron 21 of 23) -337921 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_555 chr1 226902769 226902769 + 3.30652 NA intron (NM_002221, intron 2 of 7) MIR|SINE|MIR 24107 NM_002221 3707 Hs.528087 NM_002221 HPRD:00942 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding Atac153_MAPQ30_peak_5138 chr4 110972882 110972882 + 3.30652 NA exon (NM_024090, exon 4 of 4) exon (NM_024090, exon 4 of 4) 138842 NM_001178130 1950 Hs.419815 NM_001963 HPRD:00578 EGF HOMG4|URG epidermal growth factor protein-coding Atac153_MAPQ30_peak_6252 chr8 2197836 2197836 + 3.30652 NA Intergenic Intergenic 173167 NR_106983 102465695 NR_106983 MIR7160 hsa-mir-7160 microRNA 7160 ncRNA Atac153_MAPQ30_peak_4752 chr3 69547004 69547004 + 3.30652 NA Intergenic FAM|SINE|Alu -111549 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding Atac153_MAPQ30_peak_4269 chr21 38258844 38258844 + 3.30652 NA intron (NM_001242785, intron 7 of 11) intron (NM_001242785, intron 7 of 11) 80112 NM_001242784 3141 Hs.371350 NM_000411 HPRD:08360 HLCS HCS holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) protein-coding Atac153_MAPQ30_peak_1143 chr11 35347775 35347775 + 3.30652 NA intron (NM_001195728, intron 1 of 11) intron (NM_001195728, intron 1 of 11) 93330 NM_004171 6506 Hs.502338 NM_004171 HPRD:02625 SLC1A2 EAAT2|GLT-1 solute carrier family 1 (glial high affinity glutamate transporter), member 2 protein-coding Atac153_MAPQ30_peak_4926 chr3 183650231 183650231 + 3.30652 NA intron (NM_005688, intron 26 of 29) intron (NM_005688, intron 26 of 29) -47538 NM_001037639 55486 Hs.478469 NM_018622 HPRD:08484 PARL PSARL|PSARL1|PSENIP2|RHBDS1 presenilin associated, rhomboid-like protein-coding Atac153_MAPQ30_peak_5125 chr4 96685831 96685831 + 3.30652 NA Intergenic L1MA3|LINE|L1 -75408 NM_005390 5161 Hs.131361 NM_005390 HPRD:01531 PDHA2 PDHAL pyruvate dehydrogenase (lipoamide) alpha 2 protein-coding Atac153_MAPQ30_peak_4640 chr3 39653072 39653072 + 3.30652 NA Intergenic Intergenic 109515 NM_001278323 4336 Hs.121333 NM_182935 HPRD:02973 MOBP - myelin-associated oligodendrocyte basic protein protein-coding Atac153_MAPQ30_peak_5335 chr5 73863142 73863142 + 3.30652 NA Intergenic Intergenic -72706 NM_001292004 3074 Hs.69293 NM_000521 HPRD:06043 HEXB ENC-1AS|HEL-248 hexosaminidase B (beta polypeptide) protein-coding Atac153_MAPQ30_peak_5187 chr4 174893794 174893794 + 3.30652 NA Intergenic L1MA9|LINE|L1 -311034 NM_001040157 80817 Hs.555989 NM_030633 HPRD:13885 CEP44 KIAA1712|PS1TP3 centrosomal protein 44kDa protein-coding Atac153_MAPQ30_peak_3969 chr20 1678304 1678304 + 3.30652 NA Intergenic Intergenic -39879 NM_001039508 55423 Hs.590883 NM_018556 ENSG00000089012 SIRPG CD172g|SIRP-B2|SIRPB2|SIRPgamma|bA77C3.1 signal-regulatory protein gamma protein-coding Atac153_MAPQ30_peak_5837 chr6 163825352 163825352 + 3.30652 NA Intergenic Intergenic 9630 NR_037593 100526820 Hs.644159 NR_037593 ENSG00000270419 CAHM LINC00468 colon adenocarcinoma hypermethylated (non-protein coding) ncRNA Atac153_MAPQ30_peak_2848 chr17 46050248 46050248 + 3.30652 NA intron (NM_001278197, intron 2 of 13) MIRb|SINE|MIR 1926 NM_001278217 80279 Hs.20157 NM_025197 HPRD:12190 CDK5RAP3 C53|HSF-27|IC53|LZAP|MST016|OK/SW-cl.114|PP1553 CDK5 regulatory subunit associated protein 3 protein-coding Atac153_MAPQ30_peak_4248 chr21 33868755 33868755 + 3.30652 NA intron (NR_104472, intron 4 of 6) intron (NR_104472, intron 4 of 6) 84010 NR_104472 59271 Hs.208358 NM_058187 HPRD:10760 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|SUE21 eva-1 homolog C (C. elegans) protein-coding Atac153_MAPQ30_peak_5917 chr7 13860830 13860830 + 3.30652 NA Intergenic Intergenic 165309 NM_001163150 2115 Hs.22634 NM_004956 HPRD:02765 ETV1 ER81 ets variant 1 protein-coding Atac153_MAPQ30_peak_4042 chr20 24395525 24395525 + 3.30652 NA Intergenic Intergenic -54310 NM_024893 79953 Hs.124638 NM_024893 HPRD:12766 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding Atac153_MAPQ30_peak_6339 chr8 36638403 36638403 + 3.30652 NA Intergenic Intergenic -3439 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium channel, subfamily U, member 1 protein-coding Atac153_MAPQ30_peak_2375 chr16 7504531 7504531 + 3.30652 NA intron (NM_145893, intron 1 of 13) intron (NM_145893, intron 1 of 13) 121780 NM_145893 54715 Hs.459842 NM_018723 HPRD:16091 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding Atac153_MAPQ30_peak_6109 chr7 109933404 109933404 + 3.30652 NA Intergenic HSMAR1|DNA|TcMar-Mariner -333134 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3, subunit I pseudogene 1 pseudo Atac153_MAPQ30_peak_1580 chr12 93565912 93565912 + 3.30652 NA intron (NR_040096, intron 3 of 4) MIR|SINE|MIR -2230 NR_120492 102724933 Hs.663947 NR_120492 LOC102724933 - uncharacterized LOC102724933 ncRNA Atac153_MAPQ30_peak_907 chr10 110773274 110773274 + 3.30652 NA Intergenic Intergenic -157141 NR_046928 100873762 NR_046928 RNU6-53P RNU6-53 RNA, U6 small nuclear 53, pseudogene snRNA Atac153_MAPQ30_peak_2862 chr17 48871802 48871802 + 3.30652 NA Intergenic MSTB|LTR|ERVL-MaLR 25791 NR_107026 102466918 NR_107026 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA Atac153_MAPQ30_peak_3541 chr2 55843967 55843967 + 3.30652 NA intron (NM_001282850, intron 1 of 15) intron (NM_001282850, intron 1 of 15) 893 NM_001122964 57223 Hs.516182 NM_020463 HPRD:13854 SMEK2 FLFL2|PP4R3B|PSY2|smk1 SMEK homolog 2, suppressor of mek1 (Dictyostelium) protein-coding Atac153_MAPQ30_peak_3484 chr2 30426439 30426439 + 3.30652 NA Intergenic Intergenic -27958 NM_030915 81606 Hs.567598 NM_030915 HPRD:13965 LBH - limb bud and heart development protein-coding Atac153_MAPQ30_peak_4748 chr3 68911442 68911442 + 3.30652 NA intron (NM_001005527, intron 3 of 5) Charlie4a|DNA|hAT-Charlie 70319 NM_001005527 151647 Hs.187873 NM_182522 HPRD:08343 FAM19A4 TAFA-4|TAFA4 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4 protein-coding Atac153_MAPQ30_peak_1562 chr12 68633413 68633413 + 3.30652 NA Intergenic Intergenic -13842 NM_018402 55801 Hs.272350 NM_018402 HPRD:16140 IL26 AK155|IL-26 interleukin 26 protein-coding Atac153_MAPQ30_peak_1576 chr12 90516249 90516249 + 3.30652 NA Intergenic L1MA4A|LINE|L1 413517 NR_028138 338758 Hs.601766 NR_028138 ENSG00000271614 LINC00936 - long intergenic non-protein coding RNA 936 ncRNA Atac153_MAPQ30_peak_43 chr1 7328086 7328086 + 3.30652 NA intron (NM_015215, intron 5 of 22) L1MEc|LINE|L1 482702 NR_038934 23261 Hs.397705 NM_015215 HPRD:16681 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding Atac153_MAPQ30_peak_2738 chr17 18080557 18080557 + 3.30652 NA intron (NM_016239, intron 64 of 64) L2b|LINE|L2 -6310 NM_017758 54890 Hs.744130 NM_017758 HPRD:08621 ALKBH5 ABH5|OFOXD|OFOXD1 AlkB family member 5, RNA demethylase protein-coding Atac153_MAPQ30_peak_1283 chr11 79349580 79349580 + 3.30652 NA Intergenic MIR3|SINE|MIR -197885 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ODZ4|TNM4|Ten-M4 teneurin transmembrane protein 4 protein-coding Atac153_MAPQ30_peak_3377 chr2 2447836 2447836 + 3.30652 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -112791 NM_015025 23040 Hs.434418 NM_015025 HPRD:14797 MYT1L NZF1|ZC2HC4B myelin transcription factor 1-like protein-coding Atac153_MAPQ30_peak_1847 chr13 98330796 98330796 + 3.30652 NA Intergenic Intergenic 244321 NM_021033 5911 Hs.508480 NM_021033 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding Atac153_MAPQ30_peak_6804 chr9 127542766 127542766 + 3.30652 NA intron (NM_182487, intron 1 of 7) intron (NM_182487, intron 1 of 7) 3329 NM_182487 169611 Hs.357004 NM_182487 HPRD:14876 OLFML2A PRO34319 olfactomedin-like 2A protein-coding Atac153_MAPQ30_peak_4898 chr3 159310495 159310495 + 3.30652 NA intron (NM_001197108, intron 1 of 6) L2c|LINE|L2 175906 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA Atac153_MAPQ30_peak_789 chr10 72486433 72486433 + 3.30652 NA intron (NM_080722, intron 4 of 21) intron (NM_080722, intron 4 of 21) 53874 NM_080722 140766 Hs.352156 NM_080722 HPRD:06329 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif, 14 protein-coding Atac153_MAPQ30_peak_843 chr10 86796429 86796429 + 3.30652 NA Intergenic MER49|LTR|ERV1 162232 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA Atac153_MAPQ30_peak_2451 chr16 25900382 25900382 + 3.30652 NA intron (NM_006040, intron 1 of 1) intron (NM_006040, intron 1 of 1) 197035 NM_006040 9951 Hs.655275 NM_006040 HPRD:04960 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 protein-coding Atac153_MAPQ30_peak_2164 chr15 54935010 54935010 + 3.30652 NA Intergenic L1PA12|LINE|L1 554221 NM_016304 51187 Hs.274772 NM_016304 RSL24D1 C15orf15|HRP-L30-iso|L30|RLP24|RPL24|RPL24L|TVAS3 ribosomal L24 domain containing 1 protein-coding Atac153_MAPQ30_peak_1601 chr12 104052904 104052904 + 3.30652 NA intron (NM_017564, intron 15 of 68) intron (NM_017564, intron 15 of 68) 71835 NM_017564 55576 Hs.408249 NM_017564 HPRD:10542 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE stabilin 2 protein-coding Atac153_MAPQ30_peak_6920 chrX 16996069 16996069 + 3.30652 NA intron (NM_004726, intron 1 of 17) MLT1G1|LTR|ERVL-MaLR 31255 NM_001080975 9185 Hs.186810 NM_004726 HPRD:02262 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding Atac153_MAPQ30_peak_1458 chr12 11053158 11053158 + 3.30652 NA intron (NR_037918, intron 4 of 9) L1PB3|LINE|L1 9003 NM_023920 50838 Hs.679407 NM_023920 HPRD:11991 TAS2R13 T2R13|TRB3 taste receptor, type 2, member 13 protein-coding Atac153_MAPQ30_peak_1567 chr12 75704896 75704896 + 3.30652 NA intron (NM_001286547, intron 7 of 15) L2a|LINE|L2 18940 NM_032606 84698 Hs.733835 NM_032606 HPRD:09659 CAPS2 - calcyphosine 2 protein-coding Atac153_MAPQ30_peak_2642 chr16 89171228 89171228 + 3.30652 NA intron (NR_104293, intron 4 of 10) intron (NR_104293, intron 4 of 10) 11011 NM_174917 197322 Hs.461727 NM_174917 HPRD:14117 ACSF3 - acyl-CoA synthetase family member 3 protein-coding Atac153_MAPQ30_peak_4969 chr4 3117059 3117059 + 3.30652 NA exon (NM_002111, exon 7 of 67) exon (NM_002111, exon 7 of 67) -40818 NR_045414 100750326 Hs.575112 NR_045414 HTT-AS HTT-AS1|HTTAS HTT antisense RNA (head to head) ncRNA Atac153_MAPQ30_peak_3443 chr2 20018172 20018172 + 3.30652 NA Intergenic Intergenic -50443 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA Atac153_MAPQ30_peak_3134 chr18 64505726 64505726 + 3.30652 NA Intergenic L1PA16|LINE|L1 -234351 NM_001271028 28513 Hs.42771 NM_021153 HPRD:04311 CDH19 CDH7|CDH7L2 cadherin 19, type 2 protein-coding Atac153_MAPQ30_peak_4734 chr3 62606465 62606465 + 3.30652 NA intron (NM_183393, intron 6 of 26) intron (NM_183393, intron 6 of 26) -247275 NM_018008 55079 Hs.241523 NM_018008 HPRD:07596 FEZF2 FEZ|FEZL|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding Atac153_MAPQ30_peak_5611 chr6 21360253 21360253 + 3.30652 NA Intergenic HERVL32-int|LTR|ERVL 151870 NR_103790 100874531 Hs.112750 NR_103790 LINC00581 - long intergenic non-protein coding RNA 581 ncRNA Atac153_MAPQ30_peak_1599 chr12 103438068 103438068 + 3.30652 NA Intergenic MamSINE1|SINE|tRNA 86616 NM_004316 429 Hs.703025 NM_004316 HPRD:00011 ASCL1 ASH1|HASH1|MASH1|bHLHa46 achaete-scute family bHLH transcription factor 1 protein-coding Atac153_MAPQ30_peak_278 chr1 58888640 58888640 + 3.30652 NA Intergenic LTR67B|LTR|ERVL 123806 NM_145243 115209 Hs.425769 NM_145243 HPRD:14879 OMA1 2010001O09Rik|DAB1|MPRP-1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding Atac153_MAPQ30_peak_7108 chrX 78154357 78154357 + 3.30652 NA Intergenic L1PA15|LINE|L1 2389 NR_036258 100422932 NR_036258 MIR4328 - microRNA 4328 ncRNA Atac153_MAPQ30_peak_4348 chr22 23143907 23143907 + 3.30652 NA Intergenic Intergenic -21363 NR_030755 723778 NR_030755 miRBase:MI0003665 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA Atac153_MAPQ30_peak_3268 chr19 30700079 30700079 + 3.30652 NA Intergenic Tigger15a|DNA|TcMar-Tigger -163249 NM_014717 9745 Hs.378901 NM_014717 HPRD:15825 ZNF536 - zinc finger protein 536 protein-coding Atac153_MAPQ30_peak_5660 chr6 37760900 37760900 + 3.30652 NA Intergenic Intergenic -26407 NM_021943 60685 Hs.36959 NM_021943 HPRD:12121 ZFAND3 TEX27 zinc finger, AN1-type domain 3 protein-coding Atac153_MAPQ30_peak_3394 chr2 6428999 6428999 + 3.30652 NA Intergenic Intergenic 86555 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA Atac153_MAPQ30_peak_3327 chr19 47325424 47325424 + 3.30652 NA Intergenic MER52C|LTR|ERV1 8537 NR_024258 100170220 Hs.541243 NR_024258 SNAR-E - small ILF3/NF90-associated RNA E snRNA Atac153_MAPQ30_peak_2364 chr16 4549121 4549121 + 3.30652 NA intron (NM_001286267, intron 2 of 6) intron (NM_001286267, intron 2 of 6) 3262 NM_001127205 3163 Hs.284279 NM_002134 HPRD:00783 HMOX2 HO-2 heme oxygenase (decycling) 2 protein-coding Atac153_MAPQ30_peak_2168 chr15 56058416 56058416 + 3.30652 NA Intergenic MLT1D|LTR|ERVL-MaLR -23239 NM_173814 283659 Hs.130957 NM_173814 HPRD:18765 PRTG IGDCC5 protogenin protein-coding Atac153_MAPQ30_peak_2562 chr16 70955509 70955509 + 3.30652 NA intron (NM_001270974, intron 45 of 85) MIR|SINE|MIR -120448 NM_018052 55697 Hs.445061 NM_018052 HPRD:07660 VAC14 ArPIKfyve|TAX1BP2|TRX Vac14 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5053 chr4 26156057 26156057 + 3.30652 NA Intergenic Intergenic -165275 NM_203283 3516 Hs.479396 NM_005349 HPRD:00920 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding Atac153_MAPQ30_peak_3996 chr20 8829551 8829551 + 3.30652 NA intron (NM_182734, intron 32 of 32) intron (NM_182734, intron 32 of 32) -220150 NM_001172646 5332 Hs.472101 NM_000933 HPRD:02885 PLCB4 ARCND2|PI-PLC phospholipase C, beta 4 protein-coding Atac153_MAPQ30_peak_624 chr1 247198086 247198086 + 3.30652 NA 3' UTR (NM_001204220, exon 4 of 4) 3' UTR (NM_001204220, exon 4 of 4) -26691 NM_020394 57116 Hs.669893 NM_020394 HPRD:11534 ZNF695 SBZF3 zinc finger protein 695 protein-coding Atac153_MAPQ30_peak_2754 chr17 21195016 21195016 + 3.30652 NA intron (NM_002756, intron 1 of 11) MIRb|SINE|MIR 3668 NM_002756 5606 Hs.514012 NM_002756 HPRD:03816 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding Atac153_MAPQ30_peak_6461 chr8 119789846 119789846 + 3.30652 NA Intergenic Intergenic -155612 NR_109794 401474 Hs.359393 NM_207506 HPRD:15293 SAMD12 - sterile alpha motif domain containing 12 protein-coding Atac153_MAPQ30_peak_6008 chr7 51030446 51030446 + 3.30652 NA Intergenic Intergenic -169287 NM_001001555 2887 Hs.164060 NM_005311 HPRD:03312 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor-bound protein 10 protein-coding Atac153_MAPQ30_peak_6205 chr7 152707648 152707648 + 3.30652 NA Intergenic Intergenic 250814 NR_073000 57180 Hs.647117 NM_020445 HPRD:12489 ACTR3B ARP11|ARP3BETA ARP3 actin-related protein 3 homolog B (yeast) protein-coding Atac153_MAPQ30_peak_5380 chr5 115845765 115845765 + 3.30652 NA intron (NM_020796, intron 1 of 18) intron (NM_020796, intron 1 of 18) 62571 NR_109879 101927233 Hs.732850 NR_109879 SEMA6A-AS1 CTB-118N6.3 SEMA6A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_438 chr1 175719034 175719034 + 3.30652 NA Intergenic MLT1K|LTR|ERVL-MaLR -6282 NM_003285 7143 Hs.659864 NM_003285 HPRD:03589 TNR TN-R tenascin R protein-coding Atac153_MAPQ30_peak_2948 chr17 76641617 76641617 + 3.30652 NA Intergenic Intergenic -13478 NR_110849 101928710 Hs.464224 NR_110848 ENSG00000267123 LOC101928710 - uncharacterized LOC101928710 ncRNA Atac153_MAPQ30_peak_6995 chrX 39916562 39916562 + 3.30652 NA exon (NM_001123383, exon 11 of 15) exon (NM_001123383, exon 11 of 15) 40157 NM_017745 54880 Hs.659681 NM_017745 HPRD:06458 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding Atac153_MAPQ30_peak_2449 chr16 25775577 25775577 + 3.30652 NA intron (NM_006040, intron 1 of 1) intron (NM_006040, intron 1 of 1) 72230 NM_006040 9951 Hs.655275 NM_006040 HPRD:04960 HS3ST4 3-OST-4|30ST4|3OST4|h3-OST-4 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 protein-coding Atac153_MAPQ30_peak_1754 chr13 20972485 20972485 + 3.30652 NA Intergenic Intergenic 35500 NR_039721 100616304 NR_039721 MIR4499 - microRNA 4499 ncRNA Atac153_MAPQ30_peak_672 chr10 14039913 14039913 + 3.30652 NA intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) -76370 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA Atac153_MAPQ30_peak_929 chr10 120598083 120598083 + 3.30652 NA Intergenic L2c|LINE|L2 -83325 NM_153810 143384 Hs.420024 NM_153810 HPRD:12576 CACUL1 C10orf46|CAC1 CDK2-associated, cullin domain 1 protein-coding Atac153_MAPQ30_peak_3372 chr2 1750010 1750010 + 3.30652 NA Intergenic Intergenic -1691 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_1587 chr12 96128265 96128265 + 3.30652 NA intron (NM_021229, intron 3 of 9) intron (NM_021229, intron 3 of 9) 56271 NM_021229 59277 Hs.201034 NM_021229 HPRD:10121 NTN4 PRO3091 netrin 4 protein-coding Atac153_MAPQ30_peak_5467 chr5 156147045 156147045 + 3.30652 NA intron (NM_001128209, intron 6 of 7) intron (NM_001128209, intron 6 of 7) -130504 NR_038443 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2P3 - protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 3 pseudo Atac153_MAPQ30_peak_4970 chr4 3187059 3187059 + 3.30652 NA intron (NM_002111, intron 37 of 66) L2a|LINE|L2 -63708 NM_001042690 345222 Hs.442291 NM_001012982 MSANTD1 C4orf44 Myb/SANT-like DNA-binding domain containing 1 protein-coding Atac153_MAPQ30_peak_4208 chr20 60883745 60883745 + 3.30652 NA TTS (NM_005560) TTS (NM_005560) 5793 NM_001281437 11047 Hs.90107 NM_007002 HPRD:06440 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding Atac153_MAPQ30_peak_6662 chr9 85040103 85040103 + 3.30652 NA Intergenic Intergenic 436416 NM_001001670 389763 Hs.209545 NM_001001670 HPRD:13531 SPATA31D1 FAM75D1 SPATA31 subfamily D, member 1 protein-coding Atac153_MAPQ30_peak_5515 chr5 175348432 175348432 + 3.30652 NA Intergenic Intergenic 46886 NM_032361 84321 Hs.484227 NM_032361 HPRD:09497 THOC3 THO3|hTREX45 THO complex 3 protein-coding Atac153_MAPQ30_peak_3985 chr20 3483422 3483422 + 3.30652 NA intron (NM_139321, intron 1 of 28) L1MDa|LINE|L1 31757 NM_001207047 8455 Hs.276252 NM_012070 HPRD:04388 ATRN DPPT-L|MGCA attractin protein-coding Atac153_MAPQ30_peak_5721 chr6 78327492 78327492 + 3.30652 NA Intergenic Intergenic -72881 NM_001282136 101928601 NM_001282136 MEI4 - meiosis-specific 4 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_3562 chr2 68141413 68141413 + 3.30652 NA Intergenic Intergenic -88719 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LOC101927701 - uncharacterized LOC101927701 ncRNA Atac153_MAPQ30_peak_5623 chr6 28406488 28406488 + 3.30652 NA intron (NM_001012455, intron 1 of 3) THE1C|LTR|ERVL-MaLR 4791 NM_001012455 222696 Hs.721841 NM_001012455 ENSG00000187987 ZSCAN23 ZNF390|ZNF453|dJ29K1.3|dJ29K1.3.1 zinc finger and SCAN domain containing 23 protein-coding Atac153_MAPQ30_peak_6702 chr9 95900758 95900758 + 3.30652 NA Intergenic MLT1J|LTR|ERVL-MaLR -4188 NM_004148 4814 Hs.494457 NM_004148 HPRD:03639 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding Atac153_MAPQ30_peak_2154 chr15 46352293 46352293 + 3.30652 NA Intergenic HERVL74-int|LTR|ERVL 425355 NM_021199 58472 Hs.511251 NM_021199 HPRD:18102 SQRDL PRO1975 sulfide quinone reductase-like (yeast) protein-coding Atac153_MAPQ30_peak_1916 chr14 51302085 51302085 + 3.30652 NA Intergenic Intergenic -4246 NM_182946 51199 Hs.310429 NM_016350 HPRD:09785 NIN SCKL7 ninein (GSK3B interacting protein) protein-coding Atac153_MAPQ30_peak_4153 chr20 49584450 49584450 + 3.30652 NA Intergenic Intergenic 9099 NM_014484 27304 Hs.159410 NM_014484 HPRD:10092 MOCS3 UBA4 molybdenum cofactor synthesis 3 protein-coding Atac153_MAPQ30_peak_5091 chr4 57942779 57942779 + 3.30652 NA intron (NM_001253835, intron 1 of 3) intron (NM_001253835, intron 1 of 3) -33149 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4291 chr21 41988448 41988448 + 3.30652 NA intron (NR_073202, intron 3 of 32) MER68|LTR|ERVL 14245 NR_046774 100874326 Hs.679746 NR_046774 DSCAM-IT1 zag4 DSCAM intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_6445 chr8 102676871 102676871 + 3.30652 NA intron (NM_024915, intron 15 of 15) intron (NM_024915, intron 15 of 15) 126568 NM_032041 83988 Hs.492427 NM_032041 HPRD:09466 NCALD - neurocalcin delta protein-coding Atac153_MAPQ30_peak_6171 chr7 139260152 139260152 + 3.30652 NA intron (NM_022740, intron 13 of 14) intron (NM_022740, intron 13 of 14) 51478 NM_001080511 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2, member L protein-coding Atac153_MAPQ30_peak_1 chr1 565349 565349 + 3.30652 NA Intergenic Intergenic 2444 NR_106781 102465432 NR_106781 MIR6723 hsa-mir-6723 microRNA 6723 ncRNA Atac153_MAPQ30_peak_2617 chr16 86426133 86426133 + 3.30652 NA Intergenic MIR|SINE|MIR -46848 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA Atac153_MAPQ30_peak_6199 chr7 151403027 151403027 + 3.30652 NA intron (NM_001040633, intron 3 of 15) intron (NM_001040633, intron 3 of 15) -73683 NM_024429 51422 Hs.647072 NM_016203 HPRD:04119 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding Atac153_MAPQ30_peak_1892 chr14 22087150 22087150 + 3.30652 NA Intergenic Intergenic 15946 NM_001005466 26534 Hs.554580 NM_001005466 HPRD:14887 OR10G2 OR14-41 olfactory receptor, family 10, subfamily G, member 2 protein-coding Atac153_MAPQ30_peak_1195 chr11 58280329 58280329 + 3.30652 NA Intergenic L1MC3|LINE|L1 -4751 NM_001005218 219968 Hs.553647 NM_001005218 HPRD:17753 OR5B21 - olfactory receptor, family 5, subfamily B, member 21 protein-coding Atac153_MAPQ30_peak_4179 chr20 55707604 55707604 + 3.30652 NA Intergenic Intergenic -81148 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2659 chr17 2802153 2802153 + 3.30652 NA intron (NM_015085, intron 2 of 24) MIRb|SINE|MIR 67036 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA Atac153_MAPQ30_peak_6228 chr7 158032710 158032710 + 3.30652 NA intron (NM_130842, intron 2 of 21) intron (NM_130842, intron 2 of 21) 292795 NR_030325 693180 NR_030325 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA Atac153_MAPQ30_peak_3854 chr2 216274555 216274555 + 3.30652 NA intron (NM_212474, intron 14 of 43) intron (NM_212474, intron 14 of 43) 26236 NM_212478 2335 Hs.203717 NM_002026 HPRD:00626 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF fibronectin 1 protein-coding Atac153_MAPQ30_peak_2435 chr16 22006069 22006069 + 3.30652 NA intron (NM_173806, intron 1 of 2) intron (NM_173806, intron 1 of 2) 6362 NR_033694 255762 Hs.98244 NM_173806 HPRD:14667 PDZD9 C16orf65 PDZ domain containing 9 protein-coding Atac153_MAPQ30_peak_5875 chr6 170540052 170540052 + 3.30652 NA Intergenic Intergenic 31605 NR_002787 154449 Hs.447751 NR_002787 ENSG00000230960 LOC154449 - uncharacterized LOC154449 ncRNA Atac153_MAPQ30_peak_6382 chr8 55267163 55267163 + 3.30652 NA Intergenic Intergenic -103332 NM_022454 64321 Hs.98367 NM_022454 HPRD:18085 SOX17 VUR3 SRY (sex determining region Y)-box 17 protein-coding Atac153_MAPQ30_peak_6637 chr9 74657444 74657444 + 3.30652 NA Intergenic Intergenic 18077 NM_001128618 138240 Hs.371235 NM_001128618 ENSG00000204669 C9orf57 - chromosome 9 open reading frame 57 protein-coding Atac153_MAPQ30_peak_3794 chr2 173260950 173260950 + 3.30652 NA Intergenic Intergenic -31364 NM_000210 3655 Hs.133397 NM_000210 HPRD:00945 ITGA6 CD49f|ITGA6B|VLA-6 integrin, alpha 6 protein-coding Atac153_MAPQ30_peak_3349 chr19 54416057 54416057 + 3.30652 NA promoter-TSS (NM_031896) promoter-TSS (NM_031896) 66 NM_031896 59284 Hs.631597 NM_031896 HPRD:06062 CACNG7 - calcium channel, voltage-dependent, gamma subunit 7 protein-coding Atac153_MAPQ30_peak_1733 chr12 130919098 130919098 + 3.30652 NA intron (NM_015347, intron 11 of 18) intron (NM_015347, intron 11 of 18) 83312 NM_015347 23504 Hs.657441 NM_015347 HPRD:17183 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding Atac153_MAPQ30_peak_4357 chr22 24220417 24220417 + 3.30652 NA intron (NM_001024938, intron 6 of 11) MLT1H|LTR|ERVL-MaLR -16148 NM_002415 4282 Hs.407995 NM_002415 MIF GIF|GLIF|MMIF macrophage migration inhibitory factor (glycosylation-inhibiting factor) protein-coding Atac153_MAPQ30_peak_5724 chr6 80022015 80022015 + 3.30652 NA Intergenic HERVL18-int|LTR|ERVL -77560 NM_004242 9324 Hs.77558 NM_004242 HPRD:16062 HMGN3 PNAS-25|TRIP7 high mobility group nucleosomal binding domain 3 protein-coding Atac153_MAPQ30_peak_3602 chr2 87053407 87053407 + 3.30652 NA intron (NM_172101, intron 5 of 6) intron (NM_172101, intron 5 of 6) -17888 NM_001145873 925 Hs.85258 NM_001768 HPRD:01737 CD8A CD8|Leu2|MAL|p32 CD8a molecule protein-coding Atac153_MAPQ30_peak_4303 chr21 43809204 43809204 + 3.30652 NA promoter-TSS (NM_032404) promoter-TSS (NM_032404) 54 NM_032404 64699 Hs.208600 NM_024022 HPRD:05696 TMPRSS3 DFNB10|DFNB8|ECHOS1|TADG12 transmembrane protease, serine 3 protein-coding Atac153_MAPQ30_peak_3523 chr2 46585839 46585839 + 3.30652 NA intron (NM_001430, intron 4 of 15) intron (NM_001430, intron 4 of 15) 61298 NM_001430 2034 Hs.468410 NM_001430 HPRD:06787 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding Atac153_MAPQ30_peak_2742 chr17 19144125 19144125 + 3.30652 NA intron (NM_001102664, intron 1 of 7) L2b|LINE|L2 3435 NM_001102664 22905 Hs.743983 NM_014964 HPRD:06271 EPN2 EHB21 epsin 2 protein-coding Atac153_MAPQ30_peak_4869 chr3 138705010 138705010 + 3.30652 NA Intergenic Intergenic 20100 NM_001134659 729627 Hs.121314 NM_001134659 ENSG00000206260 PRR23A - proline rich 23A protein-coding Atac153_MAPQ30_peak_5189 chr4 178267703 178267703 + 3.30652 NA intron (NM_018248, intron 6 of 9) intron (NM_018248, intron 6 of 9) 36712 NM_018248 55247 Hs.405467 NM_018248 HPRD:16407 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei endonuclease VIII-like 3 (E. coli) protein-coding Atac153_MAPQ30_peak_6991 chrX 39381350 39381350 + 3.30652 NA Intergenic Intergenic -130322 NR_110385 101927449 Hs.553988 NR_110385 ENSG00000236747 LINC01282 - long intergenic non-protein coding RNA 1282 ncRNA Atac153_MAPQ30_peak_757 chr10 50952030 50952030 + 3.30652 NA intron (NM_018245, intron 14 of 22) intron (NM_018245, intron 14 of 22) 18395 NM_001143997 55753 Hs.17860 NM_018245 HPRD:07704 OGDHL - oxoglutarate dehydrogenase-like protein-coding Atac153_MAPQ30_peak_3139 chr18 70313391 70313391 + 3.30652 NA Intergenic MLT1H1|LTR|ERVL-MaLR -101668 NM_182511 147381 Hs.569851 NM_182511 HPRD:15970 CBLN2 - cerebellin 2 precursor protein-coding Atac153_MAPQ30_peak_5939 chr7 26652405 26652405 + 3.30652 NA Intergenic Intergenic -25085 NM_001145531 285941 Hs.413394 NM_001145531 ENSG00000222004 C7orf71 - chromosome 7 open reading frame 71 protein-coding Atac153_MAPQ30_peak_7263 chrX 147597478 147597478 + 3.30652 NA intron (NM_001169122, intron 1 of 19) L3|LINE|CR1 15339 NM_001169122 2334 Hs.496911 NM_002025 HPRD:02397 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family, member 2 protein-coding Atac153_MAPQ30_peak_7195 chrX 123676340 123676340 + 3.30652 NA intron (NM_001163278, intron 15 of 31) intron (NM_001163278, intron 15 of 31) 196208 NM_001114937 4068 Hs.349094 NM_002351 HPRD:02390 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding Atac153_MAPQ30_peak_1872 chr13 112039735 112039735 + 3.30652 NA Intergenic MER20B|DNA|hAT-Charlie 66720 NM_152324 121793 Hs.210677 NM_152324 HPRD:14603 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding Atac153_MAPQ30_peak_6829 chr9 134351813 134351813 + 3.30652 NA exon (NM_013318, exon 15 of 31) exon (NM_013318, exon 15 of 31) -9239 NR_002914 26786 NR_002914 SNORD62A RNU62|U62|U62A small nucleolar RNA, C/D box 62A snoRNA Atac153_MAPQ30_peak_5723 chr6 79577130 79577130 + 3.30652 NA promoter-TSS (NM_001010844) promoter-TSS (NM_001010844) -131 NM_001010844 134728 Hs.656212 NM_001010844 HPRD:17157 IRAK1BP1 AIP70|SIMPL interleukin-1 receptor-associated kinase 1 binding protein 1 protein-coding Atac153_MAPQ30_peak_100 chr1 17051393 17051393 + 3.30652 NA Intergenic Intergenic -4741 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo Atac153_MAPQ30_peak_2508 chr16 51684724 51684724 + 3.30652 NA Intergenic MIRb|SINE|MIR -111706 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LOC101927364 - uncharacterized LOC101927364 ncRNA Atac153_MAPQ30_peak_7154 chrX 108735258 108735258 + 3.30652 NA Intergenic MER58A|DNA|hAT-Charlie -9973 NM_001522 2986 Hs.123074 NM_001522 HPRD:02078 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding Atac153_MAPQ30_peak_4708 chr3 53693672 53693672 + 3.30652 NA intron (NM_000720, intron 4 of 48) MIRb|SINE|MIR 164596 NM_000720 776 Hs.476358 NM_000720 HPRD:00247 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium channel, voltage-dependent, L type, alpha 1D subunit protein-coding Atac153_MAPQ30_peak_5332 chr5 73380722 73380722 + 3.30652 NA Intergenic Intergenic 223428 NR_105009 102503429 Hs.519391 NR_105009 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA Atac153_MAPQ30_peak_2574 chr16 75165260 75165260 + 3.30652 NA Intergenic Intergenic -14590 NM_153486 197257 Hs.380929 NM_153486 HPRD:06318 LDHD DLD lactate dehydrogenase D protein-coding Atac153_MAPQ30_peak_5697 chr6 44836450 44836450 + 3.30652 NA intron (NM_003599, intron 10 of 10) intron (NM_003599, intron 10 of 10) 329057 NR_030313 693171 NR_030313 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA Atac153_MAPQ30_peak_2315 chr15 91849388 91849388 + 3.30652 NA Intergenic Intergenic -157181 NR_110106 101926928 Hs.638788 NR_110106 ENSG00000258551 LOC101926928 - uncharacterized LOC101926928 ncRNA Atac153_MAPQ30_peak_5861 chr6 168744919 168744919 + 3.30652 NA Intergenic Intergenic -24485 NM_214462 168002 Hs.673059 NM_214462 HPRD:12345 DACT2 C6orf116|DAPPER2|DPR2|bA503C24.7 dishevelled-binding antagonist of beta-catenin 2 protein-coding Atac153_MAPQ30_peak_816 chr10 80030544 80030544 + 3.30652 NA intron (NR_073447, intron 1 of 2) intron (NR_073447, intron 1 of 2) 3459 NR_073447 414243 Hs.55047 NR_073447 ENSG00000227136 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA Atac153_MAPQ30_peak_897 chr10 106445554 106445554 + 3.30652 NA intron (NM_014978, intron 1 of 26) MER20|DNA|hAT-Charlie -19580 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_29 chr1 4952893 4952893 + 3.30652 NA Intergenic Intergenic 237788 NM_018836 55966 Hs.25924 NM_018836 HPRD:15339 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding Atac153_MAPQ30_peak_3534 chr2 48577473 48577473 + 3.30652 NA intron (NM_002158, intron 3 of 6) L1MEg|LINE|L1 35678 NM_002158 3344 Hs.468478 NM_002158 HPRD:00882 FOXN2 HTLF forkhead box N2 protein-coding Atac153_MAPQ30_peak_6322 chr8 26036260 26036260 + 3.30652 NA Intergenic MLT1A0|LTR|ERVL-MaLR -112747 NM_002717 5520 Hs.146339 NM_002717 HPRD:09223 PPP2R2A B55A|B55ALPHA|PR52A|PR55A protein phosphatase 2, regulatory subunit B, alpha protein-coding Atac153_MAPQ30_peak_5787 chr6 135104226 135104226 + 3.30652 NA Intergenic Intergenic 167034 NM_170771 64577 Hs.486520 NM_022568 HPRD:06974 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family, member A1 protein-coding Atac153_MAPQ30_peak_6583 chr9 6845243 6845243 + 3.30652 NA intron (NM_001146696, intron 4 of 17) AluJr|SINE|Alu 87602 NM_015061 23081 Hs.709425 NM_015061 HPRD:12016 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C|bA146B14.1 lysine (K)-specific demethylase 4C protein-coding Atac153_MAPQ30_peak_1189 chr11 48203380 48203380 + 3.30652 NA Intergenic Intergenic -34982 NM_001005470 119765 Hs.553566 NM_001005470 HPRD:14960 OR4B1 OR11-106|OST208 olfactory receptor, family 4, subfamily B, member 1 protein-coding Atac153_MAPQ30_peak_428 chr1 168793678 168793678 + 3.30652 NA Intergenic Intergenic 37499 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA Atac153_MAPQ30_peak_3398 chr2 7259957 7259957 + 3.30652 NA Intergenic Intergenic -41946 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA Atac153_MAPQ30_peak_6685 chr9 92272563 92272563 + 3.30652 NA intron (NR_024280, intron 1 of 5) intron (NR_024280, intron 1 of 5) 17865 NR_024280 100129066 Hs.125947 NR_024280 UNQ6494 - uncharacterized LOC100129066 ncRNA Atac153_MAPQ30_peak_3615 chr2 91807229 91807229 + 3.30652 NA Intergenic L2a|LINE|L2 40746 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_1102 chr11 15647105 15647105 + 3.30652 NA Intergenic Intergenic -18326 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding Atac153_MAPQ30_peak_4033 chr20 23174564 23174564 + 3.30652 NA Intergenic Intergenic -61291 NR_034149 200261 Hs.352228 NM_182535 HPRD:14124 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA Atac153_MAPQ30_peak_2865 chr17 51331490 51331490 + 3.27380 NA Intergenic L1PA15|LINE|L1 268610 NM_001243552 100506650 Hs.146556 NM_001243552 ENSG00000227011 C17orf112 - chromosome 17 open reading frame 112 protein-coding Atac153_MAPQ30_peak_5149 chr4 130336385 130336385 + 3.20632 NA Intergenic Intergenic 319103 NM_001099783 132321 Hs.567679 NM_173487 HPRD:14049 C4orf33 - chromosome 4 open reading frame 33 protein-coding Atac153_MAPQ30_peak_4642 chr3 40255722 40255722 + 3.20632 NA intron (NM_001284424, intron 11 of 15) intron (NM_001284424, intron 11 of 15) -95451 NM_005875 10289 Hs.315230 NM_005875 HPRD:17032 EIF1B GC20 eukaryotic translation initiation factor 1B protein-coding Atac153_MAPQ30_peak_644 chr10 4530967 4530967 + 3.20632 NA Intergenic ERVL-int|LTR|ERVL 82306 NR_108056 100507059 Hs.158438 NR_108054 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA Atac153_MAPQ30_peak_4766 chr3 75697519 75697519 + 3.19906 NA Intergenic Intergenic -15962 NR_037925 647476 Hs.274541 NR_037925 FLJ20518 - FSHD region gene 2 family, member C pseudogene pseudo Atac153_MAPQ30_peak_1878 chr13 112761417 112761417 + 3.15725 NA promoter-TSS (NR_120394) promoter-TSS (NR_120394) -16 NR_120394 100505996 Hs.654853 NR_120392 LINC00403 - long intergenic non-protein coding RNA 403 ncRNA Atac153_MAPQ30_peak_1108 chr11 17406311 17406311 + 3.15725 NA TTS (NM_001166290) TTS (NM_001166290) 3895 NM_000525 3767 Hs.248141 NM_000525 HPRD:09022 KCNJ11 BIR|HHF2|IKATP|KIR6.2|PHHI|TNDM3 potassium inwardly-rectifying channel, subfamily J, member 11 protein-coding Atac153_MAPQ30_peak_222 chr1 41926264 41926264 + 3.15725 NA Intergenic Intergenic 24080 NM_001956 1907 Hs.1407 NM_001956 HPRD:07173 EDN2 ET2|PPET2 endothelin 2 protein-coding Atac153_MAPQ30_peak_4931 chr3 184504801 184504801 + 3.15725 NA Intergenic Intergenic -13858 NR_110043 101928992 Hs.507129 NR_110043 ENSG00000229433 LOC101928992 - uncharacterized LOC101928992 ncRNA Atac153_MAPQ30_peak_652 chr10 6064021 6064021 + 3.15725 NA intron (NM_000417, intron 3 of 7) intron (NM_000417, intron 3 of 7) 40312 NM_000417 3559 Hs.231367 NM_000417 HPRD:00986 IL2RA CD25|IDDM10|IL2R|TCGFR|p55 interleukin 2 receptor, alpha protein-coding Atac153_MAPQ30_peak_5433 chr5 142361238 142361238 + 3.15725 NA intron (NM_015071, intron 11 of 22) intron (NM_015071, intron 11 of 22) -112763 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_559 chr1 228127965 228127965 + 3.15725 NA intron (NM_003395, intron 1 of 3) intron (NM_003395, intron 1 of 3) 1419 NR_049806 100847072 NR_049806 MIR5008 - microRNA 5008 ncRNA Atac153_MAPQ30_peak_3155 chr18 74274834 74274834 + 3.15725 NA Intergenic L2a|LINE|L2 34222 NR_015417 284276 Hs.390287 NR_015417 ENSG00000263812 LINC00908 - long intergenic non-protein coding RNA 908 ncRNA Atac153_MAPQ30_peak_7311 chrY 58984480 58984480 + 3.15725 NA Intergenic BSR/Beta|Satellite|Satellite -115977 NM_005840 10251 Hs.381912 NM_005840 HPRD:03917 SPRY3 HSPRY3|spry-3 sprouty homolog 3 (Drosophila) protein-coding Atac153_MAPQ30_peak_4149 chr20 49267813 49267813 + 3.15725 NA intron (NR_111906, intron 2 of 2) MLT1E3|LTR|ERVL-MaLR 5805 NR_111906 100506175 Hs.658270 NR_111906 LOC100506175 - uncharacterized LOC100506175 ncRNA Atac153_MAPQ30_peak_5406 chr5 133748594 133748594 + 3.15725 NA promoter-TSS (NM_080656) promoter-TSS (NM_080656) -996 NM_080656 91368 Hs.156506 NM_080656 HPRD:14430 CDKN2AIPNL - CDKN2A interacting protein N-terminal like protein-coding Atac153_MAPQ30_peak_5896 chr7 2855800 2855800 + 3.15725 NA promoter-TSS (NM_001282441) promoter-TSS (NM_001282441) -907 NM_001282441 2768 Hs.487341 NM_007353 HPRD:05093 GNA12 NNX3|RMP|gep guanine nucleotide binding protein (G protein) alpha 12 protein-coding Atac153_MAPQ30_peak_4652 chr3 42555697 42555697 + 3.15725 NA intron (NM_001251882, intron 3 of 13) intron (NM_001251882, intron 3 of 13) 11593 NM_001251885 7433 Hs.348500 NM_004624 HPRD:01890 VIPR1 HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R vasoactive intestinal peptide receptor 1 protein-coding Atac153_MAPQ30_peak_1428 chr12 2860695 2860695 + 3.15725 NA Intergenic Intergenic 20140 NR_033958 283440 Hs.658536 NR_033958 ENSG00000255669 LOC283440 - uncharacterized LOC283440 ncRNA Atac153_MAPQ30_peak_1782 chr13 29157253 29157253 + 3.15725 NA Intergenic Intergenic -75888 NM_015932 51371 Hs.268742 NM_015932 HPRD:12613 POMP C13orf12|PNAS-110|UMP1 proteasome maturation protein protein-coding Atac153_MAPQ30_peak_7193 chrX 122933865 122933865 + 3.15725 NA Intergenic Intergenic -59797 NM_001204401 331 Hs.356076 NM_001167 HPRD:02094 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding Atac153_MAPQ30_peak_5490 chr5 169997720 169997720 + 3.15725 NA intron (NM_014592, intron 1 of 7) intron (NM_014592, intron 1 of 7) 66680 NM_001278340 30820 Hs.484111 NM_014592 HPRD:06879 KCNIP1 KCHIP1|VABP Kv channel interacting protein 1 protein-coding Atac153_MAPQ30_peak_2031 chr14 93134891 93134891 + 3.15725 NA intron (NM_024832, intron 7 of 9) intron (NM_024832, intron 7 of 9) 80156 NM_001008530 5641 Hs.18069 NM_005606 HPRD:04017 LGMN AEP|LGMN1|PRSC1 legumain protein-coding Atac153_MAPQ30_peak_2348 chr16 244766 244766 + 3.15725 NA intron (NM_201412, intron 6 of 9) intron (NM_201412, intron 6 of 9) 14433 NM_005331 3049 Hs.247921 NM_005331 HPRD:00791 HBQ1 HBQ hemoglobin, theta 1 protein-coding Atac153_MAPQ30_peak_6481 chr8 128903710 128903710 + 3.15725 NA intron (NR_003367, intron 1 of 7) intron (NR_003367, intron 1 of 7) 836 NR_003367 5820 Hs.133107 NR_003367 ENSG00000249859 PVT1 LINC00079|NCRNA00079 Pvt1 oncogene (non-protein coding) ncRNA Atac153_MAPQ30_peak_7241 chrX 139479119 139479119 + 3.15725 NA Intergenic L1MA1|LINE|L1 108106 NM_005634 6658 Hs.157429 NM_005634 HPRD:02432 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY (sex determining region Y)-box 3 protein-coding Atac153_MAPQ30_peak_3971 chr20 1927603 1927603 + 3.15725 NA Intergenic Intergenic 45849 NM_001190892 5173 Hs.22584 NM_024411 HPRD:08838 PDYN ADCA|PENKB|SCA23 prodynorphin protein-coding Atac153_MAPQ30_peak_1675 chr12 120272038 120272038 + 3.15725 NA intron (NM_001206999, intron 5 of 47) intron (NM_001206999, intron 5 of 47) 43057 NM_007174 11113 Hs.119594 NM_007174 HPRD:09289 CIT CRIK|STK21 citron rho-interacting serine/threonine kinase protein-coding Atac153_MAPQ30_peak_1211 chr11 63583881 63583881 + 3.15725 NA intron (NM_138471, intron 1 of 5) L2a|LINE|L2 2958 NM_138471 144097 Hs.502793 NM_138471 HPRD:14064 C11orf84 - chromosome 11 open reading frame 84 protein-coding Atac153_MAPQ30_peak_4184 chr20 56541333 56541333 + 3.15725 NA Intergenic Intergenic 70883 NR_039757 100616353 NR_039757 miRBase:MI0016899 MIR4532 - microRNA 4532 ncRNA Atac153_MAPQ30_peak_6884 chrX 1900760 1900760 + 3.15725 NA Intergenic Intergenic 166734 NM_001171039 438 Hs.522572 NM_004043 HPRD:02058 ASMT ASMTY|HIOMT|HIOMTY acetylserotonin O-methyltransferase protein-coding Atac153_MAPQ30_peak_2739 chr17 18099026 18099026 + 3.15725 NA intron (NM_017758, intron 2 of 3) AluJo|SINE|Alu 12159 NM_017758 54890 Hs.744130 NM_017758 HPRD:08621 ALKBH5 ABH5|OFOXD|OFOXD1 AlkB family member 5, RNA demethylase protein-coding Atac153_MAPQ30_peak_4920 chr3 180722324 180722324 + 3.15725 NA Intergenic L1PA7|LINE|L1 -14762 NR_033723 131118 Hs.230601 NM_145261 HPRD:12349 DNAJC19 PAM18|TIM14|TIMM14 DnaJ (Hsp40) homolog, subfamily C, member 19 protein-coding Atac153_MAPQ30_peak_197 chr1 36859640 36859640 + 3.15725 NA exon (NM_032881, exon 2 of 2) exon (NM_032881, exon 2 of 2) 3853 NM_032881 84967 Hs.603131 NM_032881 HPRD:14326 LSM10 MST074|MSTP074 LSM10, U7 small nuclear RNA associated protein-coding Atac153_MAPQ30_peak_6807 chr9 128914659 128914659 + 3.15725 NA Intergenic Intergenic 123535 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA Atac153_MAPQ30_peak_1837 chr13 91054041 91054041 + 3.15725 NA Intergenic L1M3b|LINE|L1 -91501 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA Atac153_MAPQ30_peak_4416 chr22 34825273 34825273 + 3.15725 NA Intergenic L3|LINE|CR1 -508857 NM_004737 9215 Hs.474667 NM_004737 HPRD:04665 LARGE MDC1D|MDDGA6|MDDGB6 like-glycosyltransferase protein-coding Atac153_MAPQ30_peak_1243 chr11 70039069 70039069 + 3.15725 NA Intergenic L2c|LINE|L2 -10200 NM_003824 8772 Hs.86131 NM_003824 HPRD:03909 FADD MORT1 Fas (TNFRSF6)-associated via death domain protein-coding Atac153_MAPQ30_peak_830 chr10 81248724 81248724 + 3.15725 NA Intergenic Intergenic -23633 NM_001099692 143244 Hs.104825 NM_001099692 ENSG00000253626 EIF5AL1 EIF5AP1|bA342M3.3 eukaryotic translation initiation factor 5A-like 1 protein-coding Atac153_MAPQ30_peak_4128 chr20 44952825 44952825 + 3.15725 NA Intergenic Intergenic -15688 NM_021248 64405 Hs.472861 NM_021248 HPRD:13018 CDH22 C20orf25|dJ998H6.1 cadherin 22, type 2 protein-coding Atac153_MAPQ30_peak_3159 chr18 74765985 74765985 + 3.15725 NA intron (NM_001025101, intron 3 of 8) intron (NM_001025101, intron 3 of 8) -36930 NM_001025092 4155 Hs.551713 NM_002385 HPRD:01158 MBP - myelin basic protein protein-coding Atac153_MAPQ30_peak_410 chr1 160624487 160624487 + 3.15725 NA Intergenic Intergenic -7386 NM_003037 6504 Hs.523660 NM_003037 HPRD:04603 SLAMF1 CD150|CDw150|SLAM signaling lymphocytic activation molecule family member 1 protein-coding Atac153_MAPQ30_peak_327 chr1 112677139 112677139 + 3.15725 NA Intergenic Intergenic 143949 NM_001270945 643355 Hs.279714 NM_001270945 LOC643355 - uncharacterized LOC643355 protein-coding Atac153_MAPQ30_peak_1405 chr11 132863051 132863051 + 3.15725 NA intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) -50014 NM_002545 4978 Hs.4817 NM_002545 HPRD:07198 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule-like protein-coding Atac153_MAPQ30_peak_1486 chr12 31800202 31800202 + 3.15725 NA intron (NM_001135864, intron 1 of 3) intron (NM_001135864, intron 1 of 3) 108 NM_001135864 254013 Hs.740628 NM_173802 HPRD:14666 METTL20 C12orf72 methyltransferase like 20 protein-coding Atac153_MAPQ30_peak_1443 chr12 4702401 4702401 + 3.15725 NA intron (NR_104115, intron 4 of 5) intron (NR_104115, intron 4 of 5) 3163 NM_003845 8798 Hs.439530 NM_003845 HPRD:10926 DYRK4 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 protein-coding Atac153_MAPQ30_peak_2428 chr16 19718711 19718711 + 3.15725 NA intron (NM_001012991, intron 4 of 4) MIRb|SINE|MIR -9067 NM_153208 124152 Hs.460217 NM_153208 HPRD:11340 IQCK - IQ motif containing K protein-coding Atac153_MAPQ30_peak_3166 chr18 76689069 76689069 + 3.15725 NA Intergenic L1M4|LINE|L1 -51206 NM_171999 27164 Hs.700557 NM_171999 SALL3 ZNF796 spalt-like transcription factor 3 protein-coding Atac153_MAPQ30_peak_3841 chr2 206621132 206621132 + 3.15725 NA intron (NM_003872, intron 12 of 16) intron (NM_003872, intron 12 of 16) 73908 NM_201264 8828 Hs.471200 NM_003872 HPRD:03643 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding Atac153_MAPQ30_peak_711 chr10 34487915 34487915 + 3.15725 NA intron (NM_001184791, intron 18 of 20) LTR45B|LTR|ERV1 -426307 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA Atac153_MAPQ30_peak_2861 chr17 48834428 48834428 + 3.15725 NA Intergenic Intergenic 10448 NR_073199 55018 Hs.389460 NM_017928 HPRD:07942 LINC00483 C17orf73 long intergenic non-protein coding RNA 483 ncRNA Atac153_MAPQ30_peak_5547 chr5 180480778 180480778 + 3.15725 NA intron (NM_152547, intron 6 of 10) CpG-21574 -10294 NR_107056 102465882 NR_107056 MIR8089 hsa-mir-8089 microRNA 8089 ncRNA Atac153_MAPQ30_peak_7073 chrX 67027591 67027591 + 3.15725 NA Intergenic ERVL-B4-int|LTR|ERVL 238908 NM_001011645 367 Hs.76704 NM_000044 HPRD:02437 AR AIS|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding Atac153_MAPQ30_peak_2304 chr15 89526388 89526388 + 3.15725 NA Intergenic MLT1D|LTR|ERVL-MaLR -69725 NM_001114614 4240 Hs.3745 NM_005928 HPRD:03789 MFGE8 BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47 milk fat globule-EGF factor 8 protein protein-coding Atac153_MAPQ30_peak_2084 chr14 103578941 103578941 + 3.15725 NA Intergenic Intergenic 12460 NM_001077594 91828 Hs.37712 NM_001077594 ENSG00000205436 EXOC3L4 C14orf73 exocyst complex component 3-like 4 protein-coding Atac153_MAPQ30_peak_371 chr1 151712287 151712287 + 3.15725 NA Intergenic LTR16A|LTR|ERVL 18274 NM_001144956 284485 Hs.297967 NM_001144956 ENSG00000178796 RIIAD1 C1orf230|NCRNA00166 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 protein-coding Atac153_MAPQ30_peak_4264 chr21 37432565 37432565 + 3.15725 NA promoter-TSS (NM_001007261) promoter-TSS (NM_001007261) 97 NM_001007259 54093 Hs.606200 NM_017438 HPRD:10743 SETD4 C21orf18|C21orf27 SET domain containing 4 protein-coding Atac153_MAPQ30_peak_6054 chr7 70578414 70578414 + 3.15725 NA Intergenic Intergenic -19109 NM_022479 64409 Hs.488591 NM_022479 HPRD:15655 WBSCR17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T5L Williams-Beuren syndrome chromosome region 17 protein-coding Atac153_MAPQ30_peak_231 chr1 44008786 44008786 + 3.15725 NA intron (NM_130440, intron 2 of 32) intron (NM_130440, intron 2 of 32) 12239 NM_130440 5792 Hs.272062 NM_002840 HPRD:01552 PTPRF LAR protein tyrosine phosphatase, receptor type, F protein-coding Atac153_MAPQ30_peak_2891 chr17 62025406 62025406 + 3.15725 NA exon (NM_000334, exon 17 of 24) exon (NM_000334, exon 17 of 24) -15702 NM_000626 974 Hs.89575 NM_000626 HPRD:00922 CD79B AGM6|B29|IGB CD79b molecule, immunoglobulin-associated beta protein-coding Atac153_MAPQ30_peak_1196 chr11 58955464 58955464 + 3.15725 NA intron (NM_001300727, intron 2 of 8) MER5B|DNA|hAT-Charlie 15652 NM_015177 23220 Hs.523696 NM_015177 ENSG00000110042 DTX4 RNF155 deltex 4, E3 ubiquitin ligase protein-coding Atac153_MAPQ30_peak_872 chr10 100290474 100290474 + 3.15725 NA intron (NM_001166244, intron 8 of 10) intron (NM_001166244, intron 8 of 10) -83770 NM_000195 3257 Hs.404568 NM_000195 HPRD:05403 HPS1 HPS Hermansky-Pudlak syndrome 1 protein-coding Atac153_MAPQ30_peak_3579 chr2 73171037 73171037 + 3.15725 NA 3' UTR (NM_144579, exon 14 of 14) 3' UTR (NM_144579, exon 14 of 14) 26433 NM_004097 2016 Hs.516090 NM_004097 HPRD:08963 EMX1 - empty spiracles homeobox 1 protein-coding Atac153_MAPQ30_peak_4117 chr20 42564950 42564950 + 3.15725 NA intron (NM_001098796, intron 1 of 8) intron (NM_001098796, intron 1 of 8) -9586 NM_001098798 84969 Hs.26608 NM_032883 HPRD:12734 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding Atac153_MAPQ30_peak_5758 chr6 110876649 110876649 + 3.15725 NA Intergenic Intergenic -78805 NM_033125 85413 Hs.520319 NM_033125 HPRD:12202 SLC22A16 CT2|FLIPT2|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 (organic cation/carnitine transporter), member 16 protein-coding Atac153_MAPQ30_peak_1205 chr11 61221273 61221273 + 3.15725 NA Intergenic MLT1H-int|LTR|ERVL-MaLR 23676 NM_017841 54949 Hs.313247 NM_017841 SDHAF2 C11orf79|PGL2|SDH5 succinate dehydrogenase complex assembly factor 2 protein-coding Atac153_MAPQ30_peak_1053 chr11 6003431 6003431 + 3.15725 NA Intergenic L1PA13|LINE|L1 4784 NM_001005173 338751 Hs.553703 NM_001005173 HPRD:17744 OR52L1 OR11-50 olfactory receptor, family 52, subfamily L, member 1 protein-coding Atac153_MAPQ30_peak_2595 chr16 82104533 82104533 + 3.15725 NA intron (NM_002153, intron 2 of 4) intron (NM_002153, intron 2 of 4) 35675 NM_002153 3294 Hs.162795 NM_002153 HPRD:00186 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid (17-beta) dehydrogenase 2 protein-coding Atac153_MAPQ30_peak_157 chr1 27628415 27628415 + 3.15725 NA intron (NM_001276252, intron 13 of 15) MIRb|SINE|MIR -20221 NM_032125 84065 Hs.469171 NM_032125 HPRD:13167 TMEM222 C1orf160 transmembrane protein 222 protein-coding Atac153_MAPQ30_peak_1737 chr12 131364437 131364437 + 3.15725 NA Intergenic Intergenic 7898 NM_006325 5901 Hs.10842 NM_006325 RAN ARA24|Gsp1|TC4 RAN, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_5358 chr5 95189300 95189300 + 3.15725 NA intron (NR_026936, intron 1 of 2) MLT1N2|LTR|ERVL-MaLR 1364 NR_026936 202299 Hs.8373 NM_175616 HPRD:16896 C5orf27 FIS chromosome 5 open reading frame 27 ncRNA Atac153_MAPQ30_peak_449 chr1 180232431 180232431 + 3.15725 NA intron (NM_033343, intron 2 of 5) intron (NM_033343, intron 2 of 5) 11385 NR_037642 100527964 Hs.496545 NR_037642 ENSG00000230124 LHX4-AS1 - LHX4 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1583 chr12 94422651 94422651 + 3.15725 NA Intergenic MamGypLTR2c|LTR|Gypsy -119848 NM_005761 10154 Hs.584845 NM_005761 HPRD:05036 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding Atac153_MAPQ30_peak_5726 chr6 85509573 85509573 + 3.15725 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -35619 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 - T-box 18 protein-coding Atac153_MAPQ30_peak_2306 chr15 90175361 90175361 + 3.15725 NA intron (NM_198525, intron 14 of 18) intron (NM_198525, intron 14 of 18) 23321 NM_198525 374654 Hs.513134 NM_198525 HPRD:14187 KIF7 ACLS|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding Atac153_MAPQ30_peak_2096 chr15 22919957 22919957 + 3.15725 NA intron (NM_014608, intron 1 of 30) intron (NM_014608, intron 1 of 30) 27308 NM_001287810 23191 Hs.26704 NM_014608 HPRD:05890 CYFIP1 P140SRA-1|SHYC|SRA-1|SRA1 cytoplasmic FMR1 interacting protein 1 protein-coding Atac153_MAPQ30_peak_868 chr10 98119553 98119553 + 3.15725 NA promoter-TSS (NM_033207) promoter-TSS (NM_033207) -431 NM_033207 93377 Hs.12449 NM_033207 HPRD:15521 OPALIN HTMP10|TMEM10|TMP10 oligodendrocytic myelin paranodal and inner loop protein protein-coding Atac153_MAPQ30_peak_5399 chr5 132624655 132624655 + 3.15725 NA intron (NM_015082, intron 6 of 15) intron (NM_015082, intron 6 of 15) 138743 NR_031621 100302134 NR_031621 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA Atac153_MAPQ30_peak_2277 chr15 79827157 79827157 + 3.15725 NA Intergenic Intergenic 102299 NM_015206 23251 Hs.301654 NM_015206 HPRD:17206 KIAA1024 - KIAA1024 protein-coding Atac153_MAPQ30_peak_6200 chr7 151502418 151502418 + 3.15725 NA intron (NM_016203, intron 1 of 15) MLT1H1|LTR|ERVL-MaLR 9539 NM_001040633 51422 Hs.647072 NM_016203 HPRD:04119 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase, AMP-activated, gamma 2 non-catalytic subunit protein-coding Atac153_MAPQ30_peak_7018 chrX 47815372 47815372 + 3.15725 NA Intergenic HERVL74-int|LTR|ERVL 48005 NM_006962 7569 Hs.189690 NM_006962 HPRD:11781 ZNF182 HHZ150|KOX14|ZNF21|Zfp182 zinc finger protein 182 protein-coding Atac153_MAPQ30_peak_211 chr1 38958410 38958410 + 3.15725 NA Intergenic Intergenic -277971 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA Atac153_MAPQ30_peak_5748 chr6 108067769 108067769 + 3.15725 NA intron (NM_001286408, intron 3 of 6) intron (NM_001286408, intron 3 of 6) -14169 NM_001286409 256380 Hs.486109 NM_198081 SCML4 dJ47M23.1 sex comb on midleg-like 4 (Drosophila) protein-coding Atac153_MAPQ30_peak_2193 chr15 65138282 65138282 + 3.15725 NA intron (NM_001195059, intron 1 of 4) intron (NM_001195059, intron 1 of 4) 4200 NM_025201 80301 Hs.709337 NM_025201 HPRD:15910 PLEKHO2 PLEKHQ1|PP1628|pp9099 pleckstrin homology domain containing, family O member 2 protein-coding Atac153_MAPQ30_peak_934 chr10 121794402 121794402 + 3.15725 NA Intergenic Intergenic 76377 NR_039830 100616322 NR_039830 miRBase:MI0017314 MIR4682 - microRNA 4682 ncRNA Atac153_MAPQ30_peak_1610 chr12 105771408 105771408 + 3.15725 NA Intergenic L2a|LINE|L2 46994 NM_001145199 387882 Hs.368938 NM_207376 HPRD:17368 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding Atac153_MAPQ30_peak_5976 chr7 41665279 41665279 + 3.15725 NA Intergenic Intergenic -68235 NR_027118 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4445 chr22 39280648 39280648 + 3.15725 NA Intergenic Intergenic -12390 NM_014292 23466 Hs.592201 NM_014292 HPRD:13005 CBX6 - chromobox homolog 6 protein-coding Atac153_MAPQ30_peak_1730 chr12 130670785 130670785 + 3.15725 NA Intergenic Intergenic 23781 NM_007197 11211 Hs.31664 NM_007197 HPRD:05853 FZD10 CD350|FZ-10|Fz10|FzE7|hFz10 frizzled class receptor 10 protein-coding Atac153_MAPQ30_peak_3025 chr18 13628813 13628813 + 3.15725 NA intron (NM_001003675, intron 2 of 2) intron (NM_001003675, intron 2 of 2) -12944 NM_001276251 753 Hs.731853 NM_004338 HPRD:07358 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding Atac153_MAPQ30_peak_1717 chr12 128930214 128930214 + 3.15725 NA intron (NM_001136103, intron 2 of 8) intron (NM_001136103, intron 2 of 8) 151577 NR_037406 100500817 NR_037406 MIR3612 - microRNA 3612 ncRNA Atac153_MAPQ30_peak_3962 chr2 242354026 242354026 + 3.15725 NA intron (NM_001282983, intron 7 of 17) intron (NM_001282983, intron 7 of 17) 58362 NM_001282984 9855 Hs.726316 NM_014808 HPRD:16885 FARP2 FIR|FRG|PLEKHC3 FERM, RhoGEF and pleckstrin domain protein 2 protein-coding Atac153_MAPQ30_peak_2841 chr17 43893927 43893927 + 3.15725 NA exon (NM_001145148, exon 3 of 12) exon (NM_001145148, exon 3 of 12) -28329 NM_175882 162540 Hs.144491 NM_175882 HPRD:07085 SPPL2C IMP5 signal peptide peptidase like 2C protein-coding Atac153_MAPQ30_peak_6607 chr9 32739958 32739958 + 3.15725 NA Intergenic Intergenic -43539 NM_212558 401498 Hs.522063 NM_212558 TMEM215 - transmembrane protein 215 protein-coding Atac153_MAPQ30_peak_5747 chr6 108066847 108066847 + 3.15725 NA intron (NM_001286408, intron 3 of 6) intron (NM_001286408, intron 3 of 6) -13247 NM_001286409 256380 Hs.486109 NM_198081 SCML4 dJ47M23.1 sex comb on midleg-like 4 (Drosophila) protein-coding Atac153_MAPQ30_peak_4696 chr3 52094894 52094894 + 3.15725 NA Intergenic Intergenic 4234 NR_027331 100128378 Hs.640106 NM_001123039 LINC00696 C3orf74 long intergenic non-protein coding RNA 696 ncRNA Atac153_MAPQ30_peak_1380 chr11 127105186 127105186 + 3.15725 NA Intergenic Intergenic -35779 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LOC101929497 - uncharacterized LOC101929497 ncRNA Atac153_MAPQ30_peak_2089 chr14 105192321 105192321 + 3.15725 NA intron (NM_152328, intron 1 of 12) intron (NM_152328, intron 1 of 12) 1787 NM_152328 122622 Hs.592327 NM_152328 HPRD:12433 ADSSL1 - adenylosuccinate synthase like 1 protein-coding Atac153_MAPQ30_peak_5463 chr5 154482388 154482388 + 3.15725 NA Intergenic MLT1L|LTR|ERVL-MaLR 89128 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding Atac153_MAPQ30_peak_1101 chr11 15512313 15512313 + 3.15725 NA Intergenic UCON19|Unknown|Unknown -153118 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding Atac153_MAPQ30_peak_3629 chr2 97518671 97518671 + 3.15725 NA intron (NM_016466, intron 3 of 3) intron (NM_016466, intron 3 of 3) 5085 NM_016466 51239 Hs.709507 NM_016466 HPRD:14614 ANKRD39 - ankyrin repeat domain 39 protein-coding Atac153_MAPQ30_peak_1907 chr14 35076522 35076522 + 3.15725 NA intron (NM_021249, intron 3 of 12) intron (NM_021249, intron 3 of 12) 22793 NM_021249 58533 Hs.356647 NM_021249 HPRD:12086 SNX6 MSTP010|TFAF2 sorting nexin 6 protein-coding Atac153_MAPQ30_peak_3444 chr2 20264015 20264015 + 3.15725 NA Intergenic MIR3|SINE|MIR -12226 NM_014713 9741 Hs.467807 NM_014713 HPRD:13959 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding Atac153_MAPQ30_peak_113 chr1 18745999 18745999 + 3.15725 NA Intergenic Intergenic -61425 NM_152375 127707 Hs.406913 NM_152375 HPRD:08246 KLHDC7A - kelch domain containing 7A protein-coding Atac153_MAPQ30_peak_4013 chr20 17890613 17890613 + 3.15725 NA Intergenic Intergenic 52976 NR_003045 692086 Hs.680747 NR_003045 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA Atac153_MAPQ30_peak_6974 chrX 35564861 35564861 + 3.15725 NA Intergenic L1P4d|LINE|L1 -251598 NM_001099921 139604 Hs.700562 NM_001099921 ENSG00000189023 MAGEB16 - melanoma antigen family B, 16 protein-coding Atac153_MAPQ30_peak_919 chr10 116003712 116003712 + 3.15725 NA intron (NM_001272046, intron 1 of 13) intron (NM_001272046, intron 1 of 13) 4699 NM_001272046 340706 Hs.197741 NM_198496 VWA2 AMACO|CCSP-2|NET42 von Willebrand factor A domain containing 2 protein-coding Atac153_MAPQ30_peak_959 chr10 126042752 126042752 + 3.15725 NA Intergenic Intergenic 64793 NM_000274 4942 Hs.523332 NM_000274 HPRD:02021 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding Atac153_MAPQ30_peak_6202 chr7 151814554 151814554 + 3.15725 NA intron (NM_022087, intron 9 of 11) intron (NM_022087, intron 9 of 11) 91776 NM_022087 63917 Hs.647109 NM_022087 HPRD:13560 GALNT11 GALNACT11 polypeptide N-acetylgalactosaminyltransferase 11 protein-coding Atac153_MAPQ30_peak_1921 chr14 53397195 53397195 + 3.15725 NA intron (NM_001135000, intron 2 of 14) intron (NM_001135000, intron 2 of 14) 20620 NM_001134999 10979 Hs.509343 NM_006832 HPRD:06374 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding Atac153_MAPQ30_peak_3232 chr19 14077252 14077252 + 3.15725 NA exon (NM_002918, exon 14 of 21) exon (NM_002918, exon 14 of 21) -13048 NM_001146254 79883 Hs.448497 NM_024825 HPRD:08027 PODNL1 SLRR5B podocan-like 1 protein-coding Atac153_MAPQ30_peak_2113 chr15 29115560 29115560 + 3.15725 NA Intergenic ERVL-E-int|LTR|ERVL -21739 NR_047567 728310 Hs.589351 NR_047567 ENSG00000261649 GOLGA6L7P GOLGA6L7 golgin A6 family-like 7, pseudogene pseudo Atac153_MAPQ30_peak_7118 chrX 83443580 83443580 + 3.15725 NA promoter-TSS (NM_014496) promoter-TSS (NM_014496) -637 NM_014496 27330 Hs.234478 NM_014496 RPS6KA6 PP90RSK4|RSK4 ribosomal protein S6 kinase, 90kDa, polypeptide 6 protein-coding Atac153_MAPQ30_peak_1670 chr12 119263025 119263025 + 3.15725 NA Intergenic AluJr|SINE|Alu -156275 NM_194286 84530 Hs.744964 NM_194286 HPRD:13897 SRRM4 KIAA1853|MU-MB-2.76|nSR100 serine/arginine repetitive matrix 4 protein-coding Atac153_MAPQ30_peak_5054 chr4 27337177 27337177 + 3.15725 NA Intergenic MLT1A0|LTR|ERVL-MaLR 474864 NM_020860 57620 Hs.744950 NM_020860 HPRD:11609 STIM2 - stromal interaction molecule 2 protein-coding Atac153_MAPQ30_peak_1941 chr14 61679870 61679870 + 3.15725 NA Intergenic Intergenic 68660 NM_001017970 161291 Hs.146180 NM_001017970 HPRD:18567 TMEM30B CDC50B transmembrane protein 30B protein-coding Atac153_MAPQ30_peak_6218 chr7 155999991 155999991 + 3.15725 NA Intergenic Intergenic 238291 NR_038232 285889 Hs.407095 NR_038232 ENSG00000233878 LOC285889 - uncharacterized LOC285889 ncRNA Atac153_MAPQ30_peak_863 chr10 97138345 97138345 + 3.15725 NA intron (NM_001034954, intron 16 of 30) intron (NM_001034954, intron 16 of 30) 62592 NM_001034955 10580 Hs.38621 NM_006434 HPRD:05587 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding Atac153_MAPQ30_peak_1127 chr11 27859729 27859729 + 3.15725 NA Intergenic L2b|LINE|L2 -116124 NM_170731 627 Hs.502182 NM_001709 HPRD:00214 BDNF ANON2|BULN2 brain-derived neurotrophic factor protein-coding Atac153_MAPQ30_peak_4252 chr21 34645156 34645156 + 3.15725 NA intron (NM_000628, intron 2 of 6) intron (NM_000628, intron 2 of 6) 6491 NM_000628 3588 Hs.654593 NM_000628 HPRD:00473 IL10RB CDW210B|CRF2-4|CRFB4|D21S58|D21S66|IL-10R2 interleukin 10 receptor, beta protein-coding Atac153_MAPQ30_peak_7286 chrX 152671212 152671212 + 3.15725 NA Intergenic MLT1F|LTR|ERVL-MaLR -12569 NM_001136273 139735 Hs.534554 NM_001136273 ENSG00000189420 ZFP92 ZNF897 ZFP92 zinc finger protein protein-coding Atac153_MAPQ30_peak_5845 chr6 166362309 166362309 + 3.15725 NA intron (NR_026860, intron 1 of 1) intron (NR_026860, intron 1 of 1) -38730 NR_027284 441177 Hs.708964 NM_001013720 LINC00602 - long intergenic non-protein coding RNA 602 ncRNA Atac153_MAPQ30_peak_961 chr10 126153042 126153042 + 3.15725 NA intron (NM_001167880, intron 1 of 5) intron (NM_001167880, intron 1 of 5) 2701 NM_001167880 64077 Hs.527748 NM_022126 HPRD:17274 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding Atac153_MAPQ30_peak_5907 chr7 4310242 4310242 + 3.15725 NA Intergenic Intergenic 140925 NM_001079653 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_1848 chr13 98695436 98695436 + 3.15725 NA Intergenic AluSz6|SINE|Alu 89507 NM_002271 3843 Hs.712598 NM_002271 HPRD:03597 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding Atac153_MAPQ30_peak_6940 chrX 19504292 19504292 + 3.15725 NA intron (NM_001001671, intron 3 of 28) intron (NM_001001671, intron 3 of 28) 29087 NM_001001671 389840 Hs.713701 NM_001001671 HPRD:14359 MAP3K15 ASK3|bA723P2.3 mitogen-activated protein kinase kinase kinase 15 protein-coding Atac153_MAPQ30_peak_3217 chr19 10666010 10666010 + 3.15725 NA exon (NM_023008, exon 17 of 19) exon (NM_023008, exon 17 of 19) 3212 NR_031603 100302226 NR_031603 MIR1238 MIRN1238|hsa-mir-1238 microRNA 1238 ncRNA Atac153_MAPQ30_peak_1081 chr11 10682306 10682306 + 3.15725 NA intron (NM_001206880, intron 1 of 19) L2c|LINE|L2 -8458 NM_001098579 10335 Hs.501898 NM_130385 HPRD:05242 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding Atac153_MAPQ30_peak_7175 chrX 118079645 118079645 + 3.15725 NA Intergenic Intergenic -28932 NM_001031855 79836 Hs.144266 NM_024778 HPRD:06708 LONRF3 RNF127 LON peptidase N-terminal domain and ring finger 3 protein-coding Atac153_MAPQ30_peak_2087 chr14 105099512 105099512 + 3.15725 NA Intergenic Intergenic -28415 NM_001286389 388021 Hs.652298 NM_207379 HPRD:13464 TMEM179 C14orf90|TMEM179A transmembrane protein 179 protein-coding Atac153_MAPQ30_peak_4824 chr3 127323880 127323880 + 3.15725 NA exon (NM_004526, exon 4 of 16) exon (NM_004526, exon 4 of 16) 6680 NR_073375 4171 Hs.477481 NM_004526 HPRD:00303 MCM2 BM28|CCNL1|CDCL1|D3S3194|MITOTIN|cdc19 minichromosome maintenance complex component 2 protein-coding Atac153_MAPQ30_peak_4913 chr3 172384775 172384775 + 3.15725 NA intron (NM_020792, intron 1 of 4) HUERS-P3b-int|LTR|ERV1 44233 NM_001146278 57552 Hs.444099 NM_020792 HPRD:07489 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding Atac153_MAPQ30_peak_2956 chr17 77643962 77643962 + 3.15725 NA Intergenic Intergenic 37096 NR_039893 100616170 NR_039893 miRBase:MI0017377 MIR4739 - microRNA 4739 ncRNA Atac153_MAPQ30_peak_1278 chr11 78380673 78380673 + 3.15725 NA exon (NM_001098816, exon 32 of 34) exon (NM_001098816, exon 32 of 34) -94764 NM_024678 79731 Hs.503389 NM_024678 HPRD:08026 NARS2 SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial (putative) protein-coding Atac153_MAPQ30_peak_5645 chr6 34244913 34244913 + 3.15725 NA Intergenic Intergenic -28028 NM_001287398 221491 Hs.381300 NM_178508 HPRD:12834 C6orf1 LBH chromosome 6 open reading frame 1 protein-coding Atac153_MAPQ30_peak_1253 chr11 70893970 70893970 + 3.15725 NA intron (NM_012309, intron 1 of 22) LTR40b|LTR|ERVL 41872 NM_012309 22941 Hs.268726 NM_012309 HPRD:04479 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding Atac153_MAPQ30_peak_3302 chr19 41081474 41081474 + 3.15725 NA exon (NM_020971, exon 36 of 36) exon (NM_020971, exon 36 of 36) -1283 NM_138392 92799 Hs.26506 NM_138392 HPRD:15338 SHKBP1 Sb1 SH3KBP1 binding protein 1 protein-coding Atac153_MAPQ30_peak_175 chr1 32834139 32834139 + 3.15725 NA exon (NM_001143888, exon 10 of 11) exon (NM_001143888, exon 10 of 11) 6277 NM_052841 81629 Hs.512763 NM_052841 HPRD:09635 TSSK3 SPOGA3|STK22C|STK22D|TSK3 testis-specific serine kinase 3 protein-coding Atac153_MAPQ30_peak_3442 chr2 19989831 19989831 + 3.15725 NA Intergenic Intergenic -78784 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA Atac153_MAPQ30_peak_5262 chr5 10969688 10969688 + 3.15725 NA Intergenic MER46C|DNA|TcMar-Tigger -208301 NM_001291963 1611 Hs.75189 NM_004394 HPRD:02977 DAP - death-associated protein protein-coding Atac153_MAPQ30_peak_2178 chr15 59708316 59708316 + 3.15725 NA Intergenic LTR16E1|LTR|ERVL -22056 NM_152450 145773 Hs.531168 NM_152450 HPRD:14508 FAM81A - family with sequence similarity 81, member A protein-coding Atac153_MAPQ30_peak_1321 chr11 113295537 113295537 + 3.15725 NA intron (NM_016574, intron 1 of 6) Charlie22a|DNA|hAT-Charlie 25273 NR_036183 100422855 NR_036183 miRBase:MI0015828 MIR4301 - microRNA 4301 ncRNA Atac153_MAPQ30_peak_3689 chr2 121202016 121202016 + 3.15725 NA Intergenic MIRb|SINE|MIR 21909 NR_027181 84931 Hs.334519 NM_032845 HPRD:08604 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA Atac153_MAPQ30_peak_4548 chr3 9791574 9791574 + 3.15725 NA promoter-TSS (NM_016827) promoter-TSS (NM_016827) -54 NM_016828 4968 Hs.380271 NM_002542 HPRD:03582 OGG1 HMMH|HOGG1|MUTM|OGH1 8-oxoguanine DNA glycosylase protein-coding Atac153_MAPQ30_peak_2724 chr17 16329312 16329312 + 3.15725 NA intron (NM_016113, intron 5 of 14) intron (NM_016113, intron 5 of 14) 10456 NM_016113 51393 Hs.279746 NM_016113 HPRD:05980 TRPV2 VRL|VRL-1|VRL1 transient receptor potential cation channel, subfamily V, member 2 protein-coding Atac153_MAPQ30_peak_2641 chr16 88972828 88972828 + 3.15725 NA intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) -33619 NM_001290330 100129697 Hs.689377 NM_001290330 ENSG00000205018 LOC100129697 - uncharacterized LOC100129697 protein-coding Atac153_MAPQ30_peak_2415 chr16 15606139 15606139 + 3.15725 NA intron (NM_001142469, intron 1 of 5) intron (NM_001142469, intron 1 of 5) 10016 NM_001142469 89927 Hs.401798 NM_033201 HPRD:12382 C16orf45 - chromosome 16 open reading frame 45 protein-coding Atac153_MAPQ30_peak_3044 chr18 33330992 33330992 + 3.15725 NA Intergenic LTR9|LTR|ERV1 96459 NM_020474 2589 Hs.514806 NM_020474 HPRD:03781 GALNT1 GALNAC-T1 polypeptide N-acetylgalactosaminyltransferase 1 protein-coding Atac153_MAPQ30_peak_6721 chr9 98827409 98827409 + 3.15725 NA promoter-TSS (NR_033838) promoter-TSS (NR_033838) -712 NR_033838 158435 Hs.652615 NR_033838 LOC158435 - uncharacterized LOC158435 ncRNA Atac153_MAPQ30_peak_4459 chr22 42764028 42764028 + 3.15725 NA intron (NR_120595, intron 1 of 1) intron (NR_120595, intron 1 of 1) 1186 NR_120597 102723775 Hs.335413 NR_120595 LINC01315 lnc-C22orf32-1 long intergenic non-protein coding RNA 1315 ncRNA Atac153_MAPQ30_peak_4402 chr22 32042344 32042344 + 3.15725 NA Intergenic Intergenic -15534 NM_014338 23761 Hs.420559 NM_014338 HPRD:17854 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding Atac153_MAPQ30_peak_5830 chr6 160538601 160538601 + 3.15725 NA Intergenic MLT1F2|LTR|ERVL-MaLR -4262 NM_003057 6580 Hs.117367 NM_003057 HPRD:04007 SLC22A1 HOCT1|OCT1|oct1_cds solute carrier family 22 (organic cation transporter), member 1 protein-coding Atac153_MAPQ30_peak_2860 chr17 48741202 48741202 + 3.15725 NA exon (NM_003786, exon 9 of 31) exon (NM_003786, exon 9 of 31) 28984 NM_003786 8714 Hs.463421 NM_003786 HPRD:06826 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 protein-coding Atac153_MAPQ30_peak_4085 chr20 35984870 35984870 + 3.15725 NA intron (NM_198291, intron 1 of 13) intron (NM_198291, intron 1 of 13) 10339 NM_198291 6714 Hs.195659 NM_005417 HPRD:01819 SRC ASV|SRC1|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding Atac153_MAPQ30_peak_1410 chr11 134158045 134158045 + 3.15725 NA intron (NM_001080407, intron 6 of 19) intron (NM_001080407, intron 6 of 19) 11770 NM_001080407 112937 Hs.721382 NM_138416 HPRD:08814 GLB1L3 - galactosidase, beta 1-like 3 protein-coding Atac153_MAPQ30_peak_6262 chr8 5467533 5467533 + 3.15725 NA Intergenic Intergenic -615205 NM_033225 64478 Hs.571466 NM_033225 HPRD:10523 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding Atac153_MAPQ30_peak_297 chr1 87727880 87727880 + 3.15725 NA Intergenic Intergenic 49528 NM_001290053 101927844 Hs.694591 NM_001290053 LOC101927844 - uncharacterized LOC101927844 protein-coding Atac153_MAPQ30_peak_3852 chr2 215422161 215422161 + 3.15725 NA intron (NM_001080500, intron 3 of 3) THE1B|LTR|ERVL-MaLR 47255 NR_047698 100885780 Hs.665982 NR_047698 VWC2L-IT1 - VWC2L intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4404 chr22 32438619 32438619 + 3.15725 NA promoter-TSS (NM_000343) promoter-TSS (NM_000343) -400 NM_000343 6523 Hs.1964 NM_000343 HPRD:01668 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 (sodium/glucose cotransporter), member 1 protein-coding Atac153_MAPQ30_peak_2007 chr14 82302365 82302365 + 3.15725 NA Intergenic MSTA-int|LTR|ERVL-MaLR -212960 NR_110074 101928559 Hs.525499 NR_110074 ENSG00000258977 LINC01467 - long intergenic non-protein coding RNA 1467 ncRNA Atac153_MAPQ30_peak_2658 chr17 2740087 2740087 + 3.15725 NA intron (NM_015085, intron 2 of 24) MLT1K|LTR|ERVL-MaLR 40355 NM_001100398 23108 Hs.499659 NM_015085 HPRD:17028 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding Atac153_MAPQ30_peak_614 chr1 244137778 244137778 + 3.15725 NA intron (NR_033883, intron 1 of 11) intron (NR_033883, intron 1 of 11) 57074 NR_033883 339529 Hs.209374 NR_033883 ENSG00000226828 LOC339529 - uncharacterized LOC339529 ncRNA Atac153_MAPQ30_peak_2932 chr17 73828646 73828646 + 3.15725 NA intron (NM_199242, intron 25 of 31) intron (NM_199242, intron 25 of 31) 12152 NM_199242 201294 Hs.41045 NM_199242 HPRD:10598 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D (C. elegans) protein-coding Atac153_MAPQ30_peak_5794 chr6 137030296 137030296 + 3.15725 NA intron (NM_005923, intron 2 of 29) L2c|LINE|L2 83360 NM_005923 4217 Hs.186486 NM_005923 HPRD:03904 MAP3K5 ASK1|MAPKKK5|MEKK5 mitogen-activated protein kinase kinase kinase 5 protein-coding Atac153_MAPQ30_peak_1011 chr10 132751575 132751575 + 3.15725 NA Intergenic Intergenic 9356 NR_036180 100422867 NR_036180 miRBase:MI0015825 MIR378C - microRNA 378c ncRNA Atac153_MAPQ30_peak_760 chr10 54500637 54500637 + 3.15725 NA Intergenic Intergenic 30823 NM_000242 4153 Hs.499674 NM_000242 HPRD:01107 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose-binding lectin (protein C) 2, soluble protein-coding Atac153_MAPQ30_peak_1060 chr11 6580619 6580619 + 3.15725 NA intron (NM_144666, intron 28 of 42) intron (NM_144666, intron 28 of 42) 44261 NM_015324 23378 Hs.652255 NM_015324 RRP8 KIAA0409|NML ribosomal RNA processing 8, methyltransferase, homolog (yeast) protein-coding Atac153_MAPQ30_peak_6132 chr7 130003519 130003519 + 3.15725 NA intron (NM_001127441, intron 11 of 13) intron (NM_001127441, intron 11 of 13) -16771 NM_001868 1357 Hs.2879 NM_001868 HPRD:00269 CPA1 CPA carboxypeptidase A1 (pancreatic) protein-coding Atac153_MAPQ30_peak_1889 chr14 21081512 21081512 + 3.15725 NA Intergenic Intergenic -22530 NM_001024822 493901 Hs.729466 NM_001024822 HPRD:18667 RNASE12 HEL-S-85p|RAI1 ribonuclease, RNase A family, 12 (non-active) protein-coding Atac153_MAPQ30_peak_1378 chr11 126680048 126680048 + 3.15725 NA intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -130594 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_251 chr1 48282446 48282446 + 3.15725 NA intron (NM_001194986, intron 2 of 6) MIR|SINE|MIR 180116 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding Atac153_MAPQ30_peak_2357 chr16 1988271 1988271 + 3.15725 NA TTS (NM_016332) TTS (NM_016332) 5023 NM_016332 51734 Hs.655346 NM_016332 HPRD:12095 MSRB1 SELR|SELX|SEPX1|SepR methionine sulfoxide reductase B1 protein-coding Atac153_MAPQ30_peak_48 chr1 7673295 7673295 + 3.15725 NA intron (NM_015215, intron 6 of 22) intron (NM_015215, intron 6 of 22) -158034 NM_004781 9341 Hs.66708 NM_004781 HPRD:04711 VAMP3 CEB vesicle-associated membrane protein 3 protein-coding Atac153_MAPQ30_peak_6364 chr8 43407909 43407909 + 3.15725 NA Intergenic HERVS71-int|LTR|ERV1 260324 NM_001005365 340441 Hs.531579 NM_001002920 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family, member A protein-coding Atac153_MAPQ30_peak_3278 chr19 33011882 33011882 + 3.15725 NA Intergenic MLT1I-int|LTR|ERVL-MaLR -60212 NM_004708 9141 Hs.443831 NM_004708 HPRD:06843 PDCD5 TFAR19 programmed cell death 5 protein-coding Atac153_MAPQ30_peak_3172 chr18 77544728 77544728 + 3.15725 NA Intergenic Intergenic -78940 NM_012283 26251 Hs.247905 NM_012283 HPRD:12036 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel, subfamily G, member 2 protein-coding Atac153_MAPQ30_peak_1237 chr11 68856841 68856841 + 3.15725 NA 3' UTR (NM_139075, exon 25 of 25) 3' UTR (NM_139075, exon 25 of 25) 40491 NM_139075 219931 Hs.131851 NM_139075 TPCN2 SHEP10|TPC2 two pore segment channel 2 protein-coding Atac153_MAPQ30_peak_6843 chr9 136967595 136967595 + 3.15725 NA Intergenic Intergenic -33615 NM_017588 11091 Hs.397638 NM_017588 HPRD:10614 WDR5 BIG-3|SWD3 WD repeat domain 5 protein-coding Atac153_MAPQ30_peak_5079 chr4 53890188 53890188 + 3.15725 NA intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 161693 NM_023940 65997 Hs.8035 NM_023940 HPRD:15216 RASL11B - RAS-like, family 11, member B protein-coding Atac153_MAPQ30_peak_5468 chr5 156646470 156646470 + 3.15725 NA intron (NM_005546, intron 5 of 16) intron (NM_005546, intron 5 of 16) 38563 NM_005546 3702 Hs.558348 NM_005546 HPRD:01746 ITK EMT|LPFS1|LYK|PSCTK2 IL2-inducible T-cell kinase protein-coding Atac153_MAPQ30_peak_239 chr1 45103281 45103281 + 3.15725 NA intron (NM_018150, intron 8 of 14) intron (NM_018150, intron 8 of 14) 36999 NM_024587 79639 Hs.22157 NM_024587 HPRD:07989 TMEM53 NET4 transmembrane protein 53 protein-coding Atac153_MAPQ30_peak_5956 chr7 33124092 33124092 + 3.15725 NA Intergenic LTR49-int|LTR|ERV1 -21683 NM_001002010 51251 Hs.487933 NM_016489 HPRD:05871 NT5C3A NT5C3|P5'N-1|P5N-1|PN-I|POMP|PSN1|UMPH|UMPH1|cN-III|hUMP1|p36 5'-nucleotidase, cytosolic IIIA protein-coding Atac153_MAPQ30_peak_1263 chr11 73096798 73096798 + 3.15725 NA intron (NM_032871, intron 1 of 10) AluJo|SINE|Alu 9085 NM_032871 84957 Hs.533720 NM_032871 HPRD:15544 RELT TNFRSF19L|TRLT RELT tumor necrosis factor receptor protein-coding Atac153_MAPQ30_peak_6394 chr8 61916849 61916849 + 3.15725 NA Intergenic Intergenic -36542 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA Atac153_MAPQ30_peak_699 chr10 29067073 29067073 + 3.15725 NA intron (NR_120652, intron 2 of 3) intron (NR_120652, intron 2 of 3) 17906 NR_038376 100507605 Hs.119207 NR_038374 ENSG00000235824 LINC00837 - long intergenic non-protein coding RNA 837 ncRNA Atac153_MAPQ30_peak_4174 chr20 55528315 55528315 + 3.15725 NA Intergenic Intergenic -260437 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2355 chr16 1632493 1632493 + 3.15725 NA intron (NM_014714, intron 12 of 30) MLT1D|LTR|ERVL-MaLR 29616 NM_014714 9742 Hs.389438 NM_014714 HPRD:11093 IFT140 MZSDS|SRTD9|WDTC2|c305C8.4|c380F5.1|gs114 intraflagellar transport 140 protein-coding Atac153_MAPQ30_peak_5671 chr6 40316489 40316489 + 3.15725 NA intron (NR_038887, intron 1 of 2) LTR16A1|LTR|ERVL 7256 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA Atac153_MAPQ30_peak_1277 chr11 77705071 77705071 + 3.15725 NA intron (NM_033547, intron 1 of 22) intron (NM_033547, intron 1 of 22) 646 NM_033547 92105 Hs.533723 NM_033547 HPRD:12386 INTS4 INT4|MST093 integrator complex subunit 4 protein-coding Atac153_MAPQ30_peak_5486 chr5 168616155 168616155 + 3.15725 NA intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 74543 NR_030311 693170 NR_030311 MIR585 MIRN585|hsa-mir-585 microRNA 585 ncRNA Atac153_MAPQ30_peak_4789 chr3 112939978 112939978 + 3.15725 NA intron (NM_033254, intron 2 of 19) MIRb|SINE|MIR 8603 NM_033254 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding Atac153_MAPQ30_peak_4798 chr3 119033148 119033148 + 3.15725 NA TTS (NR_046748) TTS (NR_046748) 8459 NR_046748 100874246 Hs.607097 NR_046748 ARHGAP31-AS1 - ARHGAP31 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2900 chr17 64443578 64443578 + 3.15725 NA intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -30606 NR_110822 101928001 Hs.650730 NR_110822 ENSG00000264630 LOC101928001 - uncharacterized LOC101928001 ncRNA Atac153_MAPQ30_peak_1814 chr13 51548790 51548790 + 3.15725 NA Intergenic Intergenic -63942 NR_046552 100874255 Hs.741501 NR_046552 ENSG00000233672 RNASEH2B-AS1 - RNASEH2B antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2000 chr14 77612204 77612204 + 3.15725 NA Intergenic Intergenic -4070 NM_174976 283576 Hs.525485 NM_174976 HPRD:12655 ZDHHC22 C14orf59 zinc finger, DHHC-type containing 22 protein-coding Atac153_MAPQ30_peak_561 chr1 228466913 228466913 + 3.15725 NA exon (NM_052843, exon 27 of 81) exon (NM_052843, exon 27 of 81) -65548 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 C1orf145 - chromosome 1 open reading frame 145 ncRNA Atac153_MAPQ30_peak_1539 chr12 56984160 56984160 + 3.15725 NA 3' UTR (NM_002898, exon 14 of 14) 3' UTR (NM_002898, exon 14 of 14) 39955 NM_001300905 11176 Hs.314263 NM_013449 HPRD:10417 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain, 2A protein-coding Atac153_MAPQ30_peak_3080 chr18 44729727 44729727 + 3.15725 NA Intergenic Intergenic -26982 NM_016097 51124 Hs.130917 NM_016097 HPRD:13727 IER3IP1 MEDS|PRO2309 immediate early response 3 interacting protein 1 protein-coding Atac153_MAPQ30_peak_822 chr10 80325450 80325450 + 3.15725 NA Intergenic MIRb|SINE|MIR 298365 NR_073447 414243 Hs.55047 NR_073447 ENSG00000227136 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA Atac153_MAPQ30_peak_5836 chr6 163756072 163756072 + 3.15725 NA Intergenic MLT1C|LTR|ERVL-MaLR -10567 NR_028390 285796 Hs.668693 NR_028390 PACRG-AS1 - PACRG antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1320 chr11 113178667 113178667 + 3.15725 NA Intergenic MLT1I|LTR|ERVL-MaLR -6584 NM_017868 54970 Hs.288772 NM_017868 HPRD:15577 TTC12 TPARM tetratricopeptide repeat domain 12 protein-coding Atac153_MAPQ30_peak_1107 chr11 17022219 17022219 + 3.15725 NA intron (NM_175058, intron 3 of 22) intron (NM_175058, intron 3 of 22) 13744 NM_175058 144100 Hs.12332 NM_175058 HPRD:15142 PLEKHA7 - pleckstrin homology domain containing, family A member 7 protein-coding Atac153_MAPQ30_peak_5583 chr6 7254895 7254895 + 3.15725 NA Intergenic MER5A1|DNA|hAT-Charlie 58652 NM_001292008 6745 Hs.114033 NM_003144 HPRD:02924 SSR1 TRAPA signal sequence receptor, alpha protein-coding Atac153_MAPQ30_peak_1870 chr13 111203606 111203606 + 3.15725 NA intron (NM_017817, intron 1 of 1) intron (NM_017817, intron 1 of 1) 10465 NM_017817 55647 Hs.743563 NM_017817 HPRD:06694 RAB20 - RAB20, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_4482 chr22 46364689 46364689 + 3.15725 NA intron (NM_058238, intron 1 of 3) intron (NM_058238, intron 1 of 3) 8319 NM_058238 7477 Hs.512714 NM_058238 HPRD:03573 WNT7B - wingless-type MMTV integration site family, member 7B protein-coding Atac153_MAPQ30_peak_1684 chr12 123383377 123383377 + 3.15725 NA Intergenic Intergenic -2665 NM_024667 79720 Hs.507162 NM_024667 HPRD:07794 VPS37B - vacuolar protein sorting 37 homolog B (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5139 chr4 111556287 111556287 + 3.15725 NA intron (NM_001204397, intron 2 of 6) intron (NM_001204397, intron 2 of 6) 6992 NM_153427 5308 Hs.643588 NM_000325 HPRD:03328 PITX2 ARP1|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS paired-like homeodomain 2 protein-coding Atac153_MAPQ30_peak_4023 chr20 20772550 20772550 + 3.15725 NA Intergenic LTR16A2|LTR|ERVL -79284 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein-coding Atac153_MAPQ30_peak_1633 chr12 110078033 110078033 + 3.15725 NA Intergenic Intergenic 66533 NM_001114185 4598 Hs.130607 NM_000431 HPRD:02015 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding Atac153_MAPQ30_peak_206 chr1 38313180 38313180 + 3.15725 NA intron (NM_005955, intron 2 of 10) intron (NM_005955, intron 2 of 10) 12112 NM_005955 4520 Hs.471991 NM_005955 HPRD:02546 MTF1 MTF-1|ZRF metal-regulatory transcription factor 1 protein-coding Atac153_MAPQ30_peak_3805 chr2 176966672 176966672 + 3.15725 NA Intergenic Intergenic 2142 NM_021193 3238 Hs.450028 NM_021193 HPRD:00871 HOXD12 HOX4H homeobox D12 protein-coding Atac153_MAPQ30_peak_4807 chr3 123967550 123967550 + 3.15725 NA intron (NM_001024660, intron 3 of 59) intron (NM_001024660, intron 3 of 59) 115774 NR_049798 100847021 NR_049798 MIR5002 - microRNA 5002 ncRNA Atac153_MAPQ30_peak_2668 chr17 4077135 4077135 + 3.15725 NA intron (NM_001257999, intron 20 of 24) intron (NM_001257999, intron 20 of 24) 30220 NM_001254755 124936 Hs.513871 NM_144611 HPRD:14549 CYB5D2 - cytochrome b5 domain containing 2 protein-coding Atac153_MAPQ30_peak_1935 chr14 59020948 59020948 + 3.15725 NA Intergenic MLT1H|LTR|ERVL-MaLR -79838 NR_046093 51339 Hs.48950 NM_016651 HPRD:09709 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|THYEX3 dishevelled-binding antagonist of beta-catenin 1 protein-coding Atac153_MAPQ30_peak_1797 chr13 38619325 38619325 + 3.15725 NA Intergenic L1PA15|LINE|L1 98044 NR_047500 100874188 Hs.569249 NR_047500 ENSG00000223685 LINC00571 - long intergenic non-protein coding RNA 571 ncRNA Atac153_MAPQ30_peak_1100 chr11 15485396 15485396 + 3.15725 NA Intergenic Intergenic -180035 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding Atac153_MAPQ30_peak_5750 chr6 108347287 108347287 + 3.15725 NA Intergenic Intergenic 48654 NM_014028 28962 Hs.226780 NM_014028 HPRD:09628 OSTM1 GIPN|GL|OPTB5 osteopetrosis associated transmembrane protein 1 protein-coding Atac153_MAPQ30_peak_4087 chr20 36510335 36510335 + 3.15725 NA Intergenic L2b|LINE|L2 -21164 NM_080607 128434 Hs.517029 NM_080607 HPRD:12735 VSTM2L C20orf102|dJ1118M15.2 V-set and transmembrane domain containing 2 like protein-coding Atac153_MAPQ30_peak_4136 chr20 46791456 46791456 + 3.15725 NA Intergenic MER113|DNA|hAT-Charlie -172595 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA Atac153_MAPQ30_peak_3547 chr2 60631545 60631545 + 3.15725 NA Intergenic MER20|DNA|hAT-Charlie -16965 NR_039631 100616473 NR_039631 miRBase:MI0016772 MIR4432 - microRNA 4432 ncRNA Atac153_MAPQ30_peak_2464 chr16 27761067 27761067 + 3.15725 NA exon (NM_015202, exon 16 of 28) exon (NM_015202, exon 16 of 28) 138411 NM_144675 146395 Hs.91910 NM_144675 HPRD:14464 GSG1L PRO19651 GSG1-like protein-coding Atac153_MAPQ30_peak_2148 chr15 44186306 44186306 + 3.15725 NA intron (NM_001286490, intron 8 of 15) intron (NM_001286490, intron 8 of 15) -15937 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 pseudogene 1 pseudo Atac153_MAPQ30_peak_1402 chr11 132166077 132166077 + 3.15725 NA intron (NM_001144059, intron 3 of 5) L2a|LINE|L2 11881 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript (non-protein coding) ncRNA Atac153_MAPQ30_peak_4356 chr22 24219374 24219374 + 3.15725 NA intron (NR_104247, intron 5 of 10) intron (NR_104247, intron 5 of 10) -17191 NM_002415 4282 Hs.407995 NM_002415 MIF GIF|GLIF|MMIF macrophage migration inhibitory factor (glycosylation-inhibiting factor) protein-coding Atac153_MAPQ30_peak_4670 chr3 48637064 48637064 + 3.15725 NA intron (NM_003365, intron 12 of 12) intron (NM_003365, intron 12 of 12) -4471 NM_000094 1294 Hs.476218 NM_000094 HPRD:00358 COL7A1 EBD1|EBDCT|EBR1 collagen, type VII, alpha 1 protein-coding Atac153_MAPQ30_peak_2276 chr15 79749998 79749998 + 3.15725 NA exon (NM_015206, exon 2 of 4) exon (NM_015206, exon 2 of 4) 25140 NM_015206 23251 Hs.301654 NM_015206 HPRD:17206 KIAA1024 - KIAA1024 protein-coding Atac153_MAPQ30_peak_3001 chr18 8154017 8154017 + 3.15725 NA intron (NM_001105244, intron 14 of 32) intron (NM_001105244, intron 14 of 32) 213015 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA Atac153_MAPQ30_peak_254 chr1 49150128 49150128 + 3.15725 NA intron (NM_032785, intron 6 of 13) intron (NM_032785, intron 6 of 13) 92419 NM_024603 79656 Hs.475348 NM_024603 BEND5 C1orf165 BEN domain containing 5 protein-coding Atac153_MAPQ30_peak_2639 chr16 88827703 88827703 + 3.15725 NA intron (NM_001142864, intron 1 of 50) MIRb|SINE|MIR 18528 NR_120387 339059 Hs.449817 NR_120387 HPRD:08282 LOC339059 - uncharacterized LOC339059 ncRNA Atac153_MAPQ30_peak_983 chr10 129904944 129904944 + 3.15725 NA exon (NM_002417, exon 13 of 15) exon (NM_002417, exon 13 of 15) 19524 NM_002417 4288 Hs.80976 NM_002417 HPRD:08902 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding Atac153_MAPQ30_peak_6018 chr7 55275495 55275495 + 3.15725 NA TTS (NM_005228) TTS (NM_005228) -18853 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3666 chr2 109536700 109536700 + 3.15725 NA intron (NM_022336, intron 5 of 11) MIRb|SINE|MIR 69128 NM_022336 10913 Hs.171971 NM_022336 HPRD:04974 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding Atac153_MAPQ30_peak_6756 chr9 116326842 116326842 + 3.15725 NA promoter-TSS (NM_134427) promoter-TSS (NM_134427) -392 NM_134427 5998 Hs.494875 NM_017790 HPRD:03720 RGS3 C2PA|RGP3 regulator of G-protein signaling 3 protein-coding Atac153_MAPQ30_peak_1558 chr12 66651899 66651899 + 3.15725 NA Intergenic ERVL-E-int|LTR|ERVL 7037 NR_106757 102465249 NR_106757 MIR6502 hsa-mir-6502 microRNA 6502 ncRNA Atac153_MAPQ30_peak_3656 chr2 106294287 106294287 + 3.15725 NA Intergenic MLT1A|LTR|ERVL-MaLR -67233 NM_003581 8440 Hs.529244 NM_003581 HPRD:05378 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding Atac153_MAPQ30_peak_6185 chr7 147821054 147821054 + 3.15725 NA intron (NM_014141, intron 16 of 23) L2a|LINE|L2 194369 NR_036093 100422849 NR_036093 MIR548T - microRNA 548t ncRNA Atac153_MAPQ30_peak_1439 chr12 3841781 3841781 + 3.15725 NA intron (NM_032680, intron 2 of 10) intron (NM_032680, intron 2 of 10) 20585 NM_001144958 84766 Hs.504534 NM_032680 HPRD:10079 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding Atac153_MAPQ30_peak_4582 chr3 14178016 14178016 + 3.15725 NA intron (NM_024334, intron 10 of 11) intron (NM_024334, intron 10 of 11) 11576 NM_024334 79188 Hs.517817 NM_024334 HPRD:15541 TMEM43 ARVC5|ARVD5|EDMD7|LUMA transmembrane protein 43 protein-coding Atac153_MAPQ30_peak_489 chr1 203650062 203650062 + 3.15725 NA intron (NM_001684, intron 1 of 20) intron (NM_001684, intron 1 of 20) -48647 NR_003019 677843 Hs.676135 NR_003019 SNORA77 ACA63 small nucleolar RNA, H/ACA box 77 snoRNA Atac153_MAPQ30_peak_2999 chr18 7555401 7555401 + 3.15725 NA Intergenic HAL1|LINE|L1 -11913 NM_002845 5797 Hs.49774 NM_002845 HPRD:01479 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase, receptor type, M protein-coding Atac153_MAPQ30_peak_3386 chr2 3360566 3360566 + 3.15725 NA intron (NM_003310, intron 1 of 8) MER51A|LTR|ERV1 21087 NM_003310 7260 Hs.502770 NM_003310 HPRD:10287 TSSC1 - tumor suppressing subtransferable candidate 1 protein-coding Atac153_MAPQ30_peak_4916 chr3 177237483 177237483 + 3.15725 NA intron (NR_047568, intron 1 of 3) LTR1|LTR|ERV1 77774 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA Atac153_MAPQ30_peak_275 chr1 57231545 57231545 + 3.15725 NA intron (NM_001004303, intron 5 of 19) L1MDa|LINE|L1 53824 NM_001004303 199920 Hs.437655 NM_001004303 HPRD:14120 C1orf168 - chromosome 1 open reading frame 168 protein-coding Atac153_MAPQ30_peak_2249 chr15 75329497 75329497 + 3.15725 NA intron (NM_001301103, intron 2 of 3) L3|LINE|CR1 -6113 NM_001301104 60490 Hs.458922 NM_021823 HPRD:14377 PPCDC PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding Atac153_MAPQ30_peak_892 chr10 105806993 105806993 + 3.15725 NA TTS (NR_030760) TTS (NR_030760) 951 NR_030760 100126326 NR_030760 MIR936 MIRN936|hsa-mir-936 microRNA 936 ncRNA Atac153_MAPQ30_peak_6006 chr7 50902423 50902423 + 3.15725 NA Intergenic Intergenic -41264 NM_001001555 2887 Hs.164060 NM_005311 HPRD:03312 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor-bound protein 10 protein-coding Atac153_MAPQ30_peak_1779 chr13 27997400 27997400 + 3.15725 NA Intergenic Intergenic -1281 NM_002097 2971 Hs.445977 NM_002097 HPRD:02916 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding Atac153_MAPQ30_peak_631 chr10 522157 522157 + 3.15725 NA intron (NM_014974, intron 2 of 36) intron (NM_014974, intron 2 of 36) 165561 NR_049884 100847086 NR_049884 MIR5699 - microRNA 5699 ncRNA Atac153_MAPQ30_peak_6224 chr7 157550792 157550792 + 3.15725 NA intron (NM_130842, intron 11 of 21) CpG -96485 NR_038966 100506585 Hs.661265 NR_038966 ENSG00000233038 LOC100506585 - uncharacterized LOC100506585 ncRNA Atac153_MAPQ30_peak_3329 chr19 48002637 48002637 + 3.15725 NA intron (NR_038457, intron 1 of 8) intron (NR_038457, intron 1 of 8) 15098 NR_038452 100505681 Hs.657320 NR_038452 ENSG00000268061 NAPA-AS1 - NAPA antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5905 chr7 4215266 4215266 + 3.15725 NA intron (NM_152744, intron 33 of 44) intron (NM_152744, intron 33 of 44) 45949 NM_001079653 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_1970 chr14 69856768 69856768 + 3.15725 NA intron (NM_004450, intron 2 of 3) AluJb|SINE|Alu 8253 NM_004450 2079 Hs.509791 NM_004450 ERH DROER enhancer of rudimentary homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_1182 chr11 46893178 46893178 + 3.15725 NA exon (NM_002334, exon 31 of 38) exon (NM_002334, exon 31 of 38) 25216 NR_038909 100507401 Hs.675301 NR_038909 ENSG00000247675 LRP4-AS1 - LRP4 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2267 chr15 78102934 78102934 + 3.15725 NA intron (NM_001301186, intron 1 of 5) MIR3|SINE|MIR 8932 NM_001301194 84894 Hs.656765 NM_032808 HPRD:14322 LINGO1 LERN1|LRRN6A|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding Atac153_MAPQ30_peak_6352 chr8 40845099 40845099 + 3.15725 NA Intergenic Intergenic -89756 NM_001135731 79698 Hs.591850 NM_024645 HPRD:07837 ZMAT4 - zinc finger, matrin-type 4 protein-coding Atac153_MAPQ30_peak_755 chr10 50277765 50277765 + 3.15725 NA intron (NM_001031746, intron 4 of 7) intron (NM_001031746, intron 4 of 7) 45812 NM_144984 196740 Hs.522928 NM_144984 HPRD:08503 VSTM4 C10orf72 V-set and transmembrane domain containing 4 protein-coding Atac153_MAPQ30_peak_2343 chr15 101808990 101808990 + 3.15725 NA Intergenic Intergenic 8735 NM_018445 55829 Hs.32148 NM_018445 HPRD:12133 VIMP ADO15|SBBI8|SELS|SEPS1 VCP-interacting membrane protein protein-coding Atac153_MAPQ30_peak_4648 chr3 41151964 41151964 + 3.15725 NA Intergenic Intergenic -88978 NM_001904 1499 Hs.476018 NM_001904 HPRD:00286 CTNNB1 CTNNB|MRD19|armadillo catenin (cadherin-associated protein), beta 1, 88kDa protein-coding Atac153_MAPQ30_peak_6077 chr7 96551151 96551151 + 3.15725 NA Intergenic Intergenic -84139 NM_005222 1750 Hs.249196 NM_005222 HPRD:02493 DLX6 - distal-less homeobox 6 protein-coding Atac153_MAPQ30_peak_4330 chr22 17401930 17401930 + 3.15725 NA Intergenic Intergenic 87182 NM_001037814 128954 Hs.434113 NM_001037814 ENSG00000215568 GAB4 - GRB2-associated binding protein family, member 4 protein-coding Atac153_MAPQ30_peak_6948 chrX 21647445 21647445 + 3.15725 NA intron (NM_014927, intron 20 of 21) THE1B-int|LTR|ERVL-MaLR 29003 NM_153270 257240 Hs.448572 NM_153270 HPRD:06558 KLHL34 - kelch-like family member 34 protein-coding Atac153_MAPQ30_peak_1061 chr11 6630338 6630338 + 3.15725 NA exon (NM_001014795, exon 6 of 12) exon (NM_001014795, exon 6 of 12) 3137 NM_006284 6881 Hs.5158 NM_006284 TAF10 TAF2A|TAF2H|TAFII30 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa protein-coding Atac153_MAPQ30_peak_1014 chr10 132880145 132880145 + 3.15725 NA Intergenic Intergenic -13336 NR_120623 101927489 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4160 chr20 50851659 50851659 + 3.15725 NA Intergenic FordPrefect|DNA|hAT-Tip100 -43135 NM_199427 55734 Hs.473082 NM_018197 HPRD:15728 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding Atac153_MAPQ30_peak_6732 chr9 102332825 102332825 + 3.15725 NA Intergenic Intergenic -195286 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA Atac153_MAPQ30_peak_4765 chr3 75235272 75235272 + 3.15725 NA Intergenic Intergenic -28355 NR_049831 100846999 NR_049831 MIR4444-2 - microRNA 4444-2 ncRNA Atac153_MAPQ30_peak_4247 chr21 33708140 33708140 + 3.15725 NA intron (NM_014825, intron 28 of 38) intron (NM_014825, intron 28 of 38) 41491 NR_002996 677846 Hs.712293 NR_002996 SNORA80A ACA67|SNORA80 small nucleolar RNA, H/ACA box 80A snoRNA Atac153_MAPQ30_peak_4526 chr22 50471421 50471421 + 3.15725 NA Intergenic Intergenic -20366 NM_001001694 400935 Hs.526712 NM_001001694 HPRD:13456 IL17REL - interleukin 17 receptor E-like protein-coding Atac153_MAPQ30_peak_1902 chr14 24905999 24905999 + 3.15725 NA intron (NM_001290257, intron 7 of 7) intron (NM_001290257, intron 7 of 7) 5660 NM_001290293 56948 Hs.643552 NM_020195 HPRD:16598 SDR39U1 C14orf124|HCDI short chain dehydrogenase/reductase family 39U, member 1 protein-coding Atac153_MAPQ30_peak_219 chr1 41223767 41223767 + 3.15725 NA TTS (NR_029833) TTS (NR_029833) 811 NR_029833 407031 NR_029833 MIR30C1 MIRN30C1 microRNA 30c-1 ncRNA Atac153_MAPQ30_peak_6321 chr8 25734158 25734158 + 3.15725 NA intron (NM_022659, intron 10 of 15) intron (NM_022659, intron 10 of 15) 168482 NM_022659 64641 Hs.491292 NM_022659 HPRD:16848 EBF2 COE2|EBF-2|O/E-3|OE-3 early B-cell factor 2 protein-coding Atac153_MAPQ30_peak_810 chr10 79015874 79015874 + 3.15725 NA intron (NM_001271518, intron 1 of 27) intron (NM_001271518, intron 1 of 27) 115285 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_6195 chr7 150998233 150998233 + 3.15725 NA Intergenic MLT1D|LTR|ERVL-MaLR -24002 NM_003078 6604 Hs.647067 NM_003078 HPRD:03440 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding Atac153_MAPQ30_peak_1218 chr11 64656360 64656360 + 3.15725 NA Intergenic Intergenic 2358 NR_029578 406967 NR_029578 miRBase:MI0000234 MIR192 MIRN192|miR-192|miRNA192 microRNA 192 ncRNA Atac153_MAPQ30_peak_4718 chr3 56083029 56083029 + 3.15725 NA intron (NM_015576, intron 7 of 16) L2a|LINE|L2 -196407 NR_037502 100500875 NR_037502 MIR3938 - microRNA 3938 ncRNA Atac153_MAPQ30_peak_2541 chr16 67710690 67710690 + 3.15725 NA intron (NR_027398, intron 1 of 1) intron (NR_027398, intron 1 of 1) 9973 NM_001012984 388284 Hs.632208 NM_001012984 HPRD:18380 C16orf86 - chromosome 16 open reading frame 86 protein-coding Atac153_MAPQ30_peak_1893 chr14 23284676 23284676 + 3.15725 NA non-coding (NR_040448, exon 1 of 10) non-coding (NR_040448, exon 1 of 10) 425 NR_040448 9056 Hs.513147 NM_003982 HPRD:04667 SLC7A7 LAT3|LPI|MOP-2|Y+LAT1|y+LAT-1 solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 protein-coding Atac153_MAPQ30_peak_1146 chr11 35867660 35867660 + 3.15725 NA Intergenic ERVL-E-int|LTR|ERVL -97952 NM_174902 143458 Hs.745134 NM_174902 HPRD:14063 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding Atac153_MAPQ30_peak_1866 chr13 110999951 110999951 + 3.15725 NA intron (NM_001846, intron 3 of 47) intron (NM_001846, intron 3 of 47) 6646 NR_107040 102465872 NR_107040 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA Atac153_MAPQ30_peak_4505 chr22 48183857 48183857 + 3.15725 NA intron (NR_122046, intron 8 of 8) intron (NR_122046, intron 8 of 8) 156434 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA Atac153_MAPQ30_peak_4096 chr20 39194401 39194401 + 3.15725 NA Intergenic Intergenic 123479 NM_005461 9935 Hs.169487 NM_005461 HPRD:07129 MAFB KRML|MCTO v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B protein-coding Atac153_MAPQ30_peak_1121 chr11 20067213 20067213 + 3.15725 NA exon (NM_001111018, exon 14 of 38) exon (NM_001111018, exon 14 of 38) 3636 NR_046672 100874014 Hs.557916 NR_046672 NAV2-AS2 - NAV2 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_2650 chr17 998418 998418 + 3.15725 NA intron (NM_021962, intron 3 of 22) intron (NM_021962, intron 3 of 22) 13922 NM_001092 29 Hs.159306 NM_001092 HPRD:02649 ABR MDB active BCR-related protein-coding Atac153_MAPQ30_peak_1111 chr11 17634544 17634544 + 3.15725 NA intron (NM_001277269, intron 37 of 54) intron (NM_001277269, intron 37 of 54) 65624 NM_001292063 340990 Hs.688380 NM_198497 ENSG00000188162 OTOG DFNB18B|MLEMP|OTGN otogelin protein-coding Atac153_MAPQ30_peak_782 chr10 71593882 71593882 + 3.15725 NA intron (NM_080798, intron 3 of 34) MER1B|DNA|hAT-Charlie 32238 NM_080805 1305 Hs.695934 NM_005203 HPRD:00383 COL13A1 COLXIIIA1 collagen, type XIII, alpha 1 protein-coding Atac153_MAPQ30_peak_4573 chr3 13087172 13087172 + 3.15725 NA intron (NM_001134382, intron 1 of 14) intron (NM_001134382, intron 1 of 14) 27445 NM_001134382 9922 Hs.475506 NM_014869 HPRD:11052 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding Atac153_MAPQ30_peak_7234 chrX 136545323 136545323 + 3.15725 NA Intergenic Intergenic -103023 NM_003413 7547 Hs.111227 NM_003413 HPRD:02225 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding Atac153_MAPQ30_peak_6941 chrX 19768877 19768877 + 3.15725 NA intron (NM_031892, intron 2 of 17) intron (NM_031892, intron 2 of 17) 49040 NM_001024666 30011 Hs.726365 NM_031892 HPRD:02301 SH3KBP1 CD2BP3|CIN85|GIG10|HSB-1|HSB1|MIG18 SH3-domain kinase binding protein 1 protein-coding Atac153_MAPQ30_peak_7067 chrX 64734305 64734305 + 3.15725 NA intron (NM_031206, intron 13 of 13) MIR3|SINE|MIR 20381 NM_001170649 81887 Hs.522675 NM_031206 HPRD:06519 LAS1L Las1-like|dJ475B7.2 LAS1-like (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_4985 chr4 5325295 5325295 + 3.15725 NA intron (NM_018401, intron 3 of 11) intron (NM_018401, intron 3 of 11) -201588 NM_005750 10141 Hs.177972 NM_005750 HPRD:12826 C4orf6 aC1 chromosome 4 open reading frame 6 protein-coding Atac153_MAPQ30_peak_3053 chr18 34990626 34990626 + 3.15725 NA intron (NM_001025087, intron 2 of 12) intron (NM_001025087, intron 2 of 12) 155374 NM_001025089 56853 Hs.435976 NM_020180 HPRD:12534 CELF4 BRUNOL-4|BRUNOL4 CUGBP, Elav-like family member 4 protein-coding Atac153_MAPQ30_peak_3485 chr2 30878942 30878942 + 3.15725 NA Intergenic Intergenic 151369 NM_144575 92291 Hs.660911 NM_144575 HPRD:07008 CAPN13 - calpain 13 protein-coding Atac153_MAPQ30_peak_2671 chr17 4500607 4500607 + 3.15725 NA exon (NM_198501, exon 7 of 8) exon (NM_198501, exon 7 of 8) 12773 NM_001114974 342527 Hs.441709 NM_198501 HPRD:13463 SMTNL2 - smoothelin-like 2 protein-coding Atac153_MAPQ30_peak_6805 chr9 128209440 128209440 + 3.15725 NA intron (NM_001006620, intron 9 of 10) intron (NM_001006620, intron 9 of 10) 148271 NM_001282681 26130 Hs.495134 NM_015635 HPRD:10886 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding Atac153_MAPQ30_peak_626 chr1 247552588 247552588 + 3.15725 NA Intergenic Intergenic -26870 NM_001127461 114548 Hs.159483 NM_004895 HPRD:05915 NLRP3 AGTAVPRL|AII|AVP|C1orf7|CIAS1|CLR1.1|FCAS|FCU|MWS|NALP3|PYPAF1 NLR family, pyrin domain containing 3 protein-coding Atac153_MAPQ30_peak_6092 chr7 100753441 100753441 + 3.15725 NA Intergenic MIR|SINE|MIR -16929 NM_000602 5054 Hs.414795 NM_000602 HPRD:01418 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 protein-coding Atac153_MAPQ30_peak_2506 chr16 51316833 51316833 + 3.15725 NA Intergenic Intergenic -131650 NM_002968 6299 Hs.135787 NM_002968 HPRD:03742 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt-like transcription factor 1 protein-coding Atac153_MAPQ30_peak_4619 chr3 36522896 36522896 + 3.15725 NA intron (NM_001292049, intron 2 of 8) L2c|LINE|L2 100917 NM_003149 6769 Hs.56045 NM_003149 HPRD:11890 STAC STAC1 SH3 and cysteine rich domain protein-coding Atac153_MAPQ30_peak_1329 chr11 115072248 115072248 + 3.15725 NA intron (NM_001301045, intron 7 of 10) intron (NM_001301045, intron 7 of 10) 302993 NM_014333 23705 Hs.370510 NM_014333 HPRD:05746 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_7272 chrX 149304451 149304451 + 3.15725 NA Intergenic L1MD1|LINE|L1 -91788 NR_031748 100313839 NR_031748 miRBase:MI0010633 MIR2114 - microRNA 2114 ncRNA Atac153_MAPQ30_peak_5903 chr7 4030512 4030512 + 3.15725 NA intron (NM_152744, intron 14 of 44) intron (NM_152744, intron 14 of 44) -138805 NM_001079653 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_3034 chr18 22811146 22811146 + 3.15725 NA intron (NM_015461, intron 3 of 7) intron (NM_015461, intron 3 of 7) 121068 NM_015461 25925 Hs.116935 NM_015461 HPRD:18350 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding Atac153_MAPQ30_peak_1238 chr11 68890595 68890595 + 3.15725 NA Intergenic Intergenic 48435 NR_104161 338694 Hs.564235 NR_104161 ENSG00000261070 LOC338694 - uncharacterized LOC338694 ncRNA Atac153_MAPQ30_peak_1051 chr11 5551945 5551945 + 3.15725 NA Intergenic Intergenic -13989 NM_145053 143630 Hs.10688 NM_145053 HPRD:14472 UBQLNL - ubiquilin-like protein-coding Atac153_MAPQ30_peak_7102 chrX 73270059 73270059 + 3.15725 NA intron (NR_028379, intron 5 of 6) L1PREC2|LINE|L1 105900 NR_024582 554203 Hs.648316 NR_024582 ENSG00000225470 JPX DCBALD06|ENOX|LINC00183|NCRNA00183 JPX transcript, XIST activator (non-protein coding) ncRNA Atac153_MAPQ30_peak_336 chr1 114640711 114640711 + 3.15725 NA intron (NM_001270805, intron 5 of 7) intron (NM_001270805, intron 5 of 7) 54351 NM_205848 148281 Hs.370963 NM_205848 HPRD:09654 SYT6 sytVI synaptotagmin VI protein-coding Atac153_MAPQ30_peak_3989 chr20 5199550 5199550 + 3.15725 NA Intergenic L2a|LINE|L2 92143 NM_003818 8760 Hs.126857 NM_003818 HPRD:09150 CDS2 - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 protein-coding Atac153_MAPQ30_peak_5751 chr6 109013689 109013689 + 3.15725 NA Intergenic MLT1D|LTR|ERVL-MaLR -59168 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA Atac153_MAPQ30_peak_4108 chr20 41638343 41638343 + 3.15725 NA intron (NM_133170, intron 1 of 31) intron (NM_133170, intron 1 of 31) 180214 NM_007050 11122 Hs.526879 NM_007050 HPRD:06690 PTPRT RPTPrho protein tyrosine phosphatase, receptor type, T protein-coding Atac153_MAPQ30_peak_3408 chr2 10503915 10503915 + 3.15725 NA intron (NM_001258357, intron 1 of 4) MIRc|SINE|MIR -4889 NM_001258358 3241 Hs.580427 NM_002149 HPRD:02564 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin-like 1 protein-coding Atac153_MAPQ30_peak_4350 chr22 23476156 23476156 + 3.15725 NA intron (NM_014433, intron 4 of 6) intron (NM_014433, intron 4 of 6) 8085 NM_014433 27156 Hs.526920 NM_014433 HPRD:16136 RTDR1 - rhabdoid tumor deletion region gene 1 protein-coding Atac153_MAPQ30_peak_2404 chr16 12457303 12457303 + 3.15725 NA intron (NM_032167, intron 16 of 20) intron (NM_032167, intron 16 of 20) -356875 NR_039869 100616195 NR_039869 miRBase:MI0017353 MIR4718 - microRNA 4718 ncRNA Atac153_MAPQ30_peak_3720 chr2 129061232 129061232 + 3.15725 NA intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 14939 NM_004807 9394 Hs.512841 NM_004807 HPRD:07274 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding Atac153_MAPQ30_peak_2354 chr16 1585764 1585764 + 3.15725 NA intron (NM_001256541, intron 2 of 3) intron (NM_001256541, intron 2 of 3) 2106 NM_024600 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding Atac153_MAPQ30_peak_6876 chrX 319830 319830 + 3.15725 NA intron (NM_013239, intron 2 of 12) CpG 27860 NM_013239 28227 Hs.124942 NM_013239 HPRD:02276 PPP2R3B NYREN8|PPP2R3L|PPP2R3LY|PR48 protein phosphatase 2, regulatory subunit B'', beta protein-coding Atac153_MAPQ30_peak_6476 chr8 126457883 126457883 + 3.15725 NA Intergenic Intergenic 13432 NM_001282985 10221 Hs.444947 NM_025195 HPRD:09863 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding Atac153_MAPQ30_peak_3358 chr19 57468339 57468339 + 3.15725 NA Intergenic MER20|DNA|hAT-Charlie 116069 NR_024059 100073347 Hs.467337 NR_024059 ENSG00000268654 MIMT1 LINC00067|MIM1|NCRNA00067 MER1 repeat containing imprinted transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4274 chr21 39412604 39412604 + 3.15725 NA Intergenic MLT1F2|LTR|ERVL-MaLR 80850 NM_005867 10281 Hs.23251 NM_005867 HPRD:05318 DSCR4 DCRB|DSCRB Down syndrome critical region gene 4 protein-coding Atac153_MAPQ30_peak_1514 chr12 50195573 50195573 + 3.15725 NA intron (NM_001037806, intron 6 of 12) intron (NM_001037806, intron 6 of 12) 26635 NM_001037806 57701 Hs.143067 NM_001037806 ENSG00000167566 NCKAP5L KIAA1602 NCK-associated protein 5-like protein-coding Atac153_MAPQ30_peak_4423 chr22 35850124 35850124 + 3.15725 NA Intergenic Intergenic 54008 NM_006739 4174 Hs.517582 NM_006739 HPRD:04075 MCM5 CDC46|P1-CDC46 minichromosome maintenance complex component 5 protein-coding Atac153_MAPQ30_peak_2322 chr15 93547856 93547856 + 3.15725 NA exon (NM_001271, exon 34 of 39) exon (NM_001271, exon 34 of 39) 68533 NM_001166286 56963 Hs.271277 NM_020211 HPRD:09560 RGMA RGM repulsive guidance molecule family member a protein-coding Atac153_MAPQ30_peak_6911 chrX 13140507 13140507 + 3.15725 NA Intergenic MLT1A0|LTR|ERVL-MaLR -77590 NM_174901 171484 Hs.667546 NM_174901 HPRD:06507 FAM9C TEX39C family with sequence similarity 9, member C protein-coding Atac153_MAPQ30_peak_3116 chr18 55526739 55526739 + 3.15725 NA Intergenic Intergenic -56412 NM_005603 5205 Hs.216623 NM_005603 HPRD:03867 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 protein-coding Atac153_MAPQ30_peak_6060 chr7 72762747 72762747 + 3.15725 NA intron (NM_001281304, intron 7 of 7) MER21C|LTR|ERVL 20512 NM_003602 8468 Hs.661266 NM_003602 HPRD:05326 FKBP6 FKBP36 FK506 binding protein 6, 36kDa protein-coding Atac153_MAPQ30_peak_5989 chr7 47320452 47320452 + 3.15725 NA intron (NM_022748, intron 28 of 30) AluSx|SINE|Alu 301290 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding Atac153_MAPQ30_peak_6546 chr8 142943200 142943200 + 3.15725 NA Intergenic Intergenic -314500 NR_039682 100616268 NR_039682 miRBase:MI0016823 MIR4472-1 - microRNA 4472-1 ncRNA Atac153_MAPQ30_peak_1803 chr13 41344979 41344979 + 3.15725 NA intron (NM_005830, intron 1 of 6) MIR3|SINE|MIR 368 NM_005830 10240 Hs.596607 NM_005830 HPRD:10098 MRPS31 IMOGN38|MRP-S31|S31mt mitochondrial ribosomal protein S31 protein-coding Atac153_MAPQ30_peak_1507 chr12 48535091 48535091 + 3.15725 NA intron (NM_000289, intron 14 of 22) intron (NM_000289, intron 14 of 22) 8511 NR_106760 102466657 NR_106760 MIR6505 hsa-mir-6505 microRNA 6505 ncRNA Atac153_MAPQ30_peak_5717 chr6 74084276 74084276 + 3.15725 NA Intergenic Intergenic -4761 NM_001080507 441161 Hs.671212 NM_001080507 OOEP C6orf156|FLOPED|HOEP19|KHDC2 oocyte expressed protein protein-coding Atac153_MAPQ30_peak_6723 chr9 99428303 99428303 + 3.15725 NA Intergenic Intergenic -10704 NM_153698 195827 Hs.44640 NM_153698 AAED1 C9orf21 AhpC/TSA antioxidant enzyme domain containing 1 protein-coding Atac153_MAPQ30_peak_2824 chr17 41007478 41007478 + 3.15725 NA exon (NM_003734, exon 3 of 4) exon (NM_003734, exon 3 of 4) 2218 NM_001277732 8639 Hs.198241 NM_003734 HPRD:04770 AOC3 HPAO|SSAO|VAP-1|VAP1 amine oxidase, copper containing 3 protein-coding Atac153_MAPQ30_peak_2667 chr17 3951447 3951447 + 3.15725 NA intron (NM_015113, intron 37 of 54) intron (NM_015113, intron 37 of 54) -83689 NM_174954 489 Hs.513870 NM_005173 HPRD:03568 ATP2A3 SERCA3 ATPase, Ca++ transporting, ubiquitous protein-coding Atac153_MAPQ30_peak_4483 chr22 46592194 46592194 + 3.15725 NA intron (NM_005036, intron 3 of 8) intron (NM_005036, intron 3 of 8) 45695 NM_001001928 5465 Hs.103110 NM_005036 HPRD:01369 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator-activated receptor alpha protein-coding Atac153_MAPQ30_peak_7211 chrX 130309835 130309835 + 3.15725 NA Intergenic Intergenic 113200 NM_001170963 3547 Hs.22111 NM_001555 HPRD:02138 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily, member 1 protein-coding Atac153_MAPQ30_peak_6983 chrX 38518364 38518364 + 3.15725 NA intron (NM_004615, intron 1 of 7) intron (NM_004615, intron 1 of 7) 97633 NM_004615 7102 Hs.441664 NM_004615 HPRD:02107 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding Atac153_MAPQ30_peak_1977 chr14 72600407 72600407 + 3.15725 NA intron (NM_001204420, intron 2 of 15) intron (NM_001204420, intron 2 of 15) 200621 NM_001204418 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP regulator of G-protein signaling 6 protein-coding Atac153_MAPQ30_peak_756 chr10 50588489 50588489 + 3.15725 NA intron (NM_001276451, intron 6 of 6) intron (NM_001276451, intron 6 of 6) 15573 NM_001276451 644168 Hs.534530 NM_001080520 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding Atac153_MAPQ30_peak_3326 chr19 47235259 47235259 + 3.15725 NA intron (NM_013403, intron 5 of 17) L2a|LINE|L2 -14044 NM_001039885 79147 Hs.515493 NM_024301 HPRD:05962 FKRP LGMD2I|MDC1C|MDDGA5|MDDGB5|MDDGC5 fukutin related protein protein-coding Atac153_MAPQ30_peak_2858 chr17 48543104 48543104 + 3.15725 NA exon (NM_001267, exon 2 of 4) exon (NM_001267, exon 2 of 4) -2586 NR_110232 80221 Hs.288959 NM_025149 HPRD:13380 ACSF2 ACSMW|AVYV493 acyl-CoA synthetase family member 2 protein-coding Atac153_MAPQ30_peak_2308 chr15 90815817 90815817 + 3.15725 NA TTS (NM_001033088) TTS (NM_001033088) -6826 NR_102428 10519 Hs.715556 NM_006384 CIB1 CIB|CIBP|KIP1|PRKDCIP|SIP2-28 calcium and integrin binding 1 (calmyrin) protein-coding Atac153_MAPQ30_peak_1073 chr11 8646052 8646052 + 3.15725 NA intron (NM_014818, intron 11 of 19) intron (NM_014818, intron 11 of 19) -30216 NM_001289058 65975 Hs.501833 NM_030906 HPRD:09642 STK33 - serine/threonine kinase 33 protein-coding Atac153_MAPQ30_peak_4922 chr3 183077636 183077636 + 3.15725 NA intron (NM_015078, intron 3 of 29) Tigger4|DNA|TcMar-Tigger 68421 NM_015078 23101 Hs.208267 NM_015078 HPRD:08308 MCF2L2 ARHGEF22 MCF.2 cell line derived transforming sequence-like 2 protein-coding Atac153_MAPQ30_peak_766 chr10 61354987 61354987 + 3.15725 NA Intergenic Intergenic 114662 NM_194298 220963 Hs.499709 NM_194298 HPRD:15348 SLC16A9 C10orf36|MCT9 solute carrier family 16, member 9 protein-coding Atac153_MAPQ30_peak_5841 chr6 164406973 164406973 + 3.15725 NA Intergenic Intergenic 571298 NM_001301085 9444 Hs.510324 NM_006775 HPRD:06691 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing, RNA binding protein-coding Atac153_MAPQ30_peak_6187 chr7 149313665 149313665 + 3.15725 NA intron (NR_027788, intron 3 of 7) L2a|LINE|L2 8216 NR_027788 79970 Hs.520785 NM_024910 HPRD:07791 ZNF767P ZNF767 zinc finger family member 767, pseudogene pseudo Atac153_MAPQ30_peak_3152 chr18 73976872 73976872 + 3.15725 NA Intergenic Intergenic 141919 NR_040034 339298 Hs.151215 NR_040034 ENSG00000263547 LOC339298 - uncharacterized LOC339298 ncRNA Atac153_MAPQ30_peak_5965 chr7 36025578 36025578 + 3.15725 NA Intergenic AluSx|SINE|Alu -109342 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA Atac153_MAPQ30_peak_2730 chr17 17592939 17592939 + 3.15725 NA intron (NM_030665, intron 1 of 5) MIR|SINE|MIR 8152 NM_030665 10743 Hs.655395 NM_030665 HPRD:07406 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding Atac153_MAPQ30_peak_2252 chr15 75673685 75673685 + 3.15725 NA intron (NM_001145358, intron 18 of 20) intron (NM_001145358, intron 18 of 20) -12717 NM_006715 4123 Hs.26232 NM_006715 HPRD:01109 MAN2C1 MAN6A8|MANA|MANA1 mannosidase, alpha, class 2C, member 1 protein-coding Atac153_MAPQ30_peak_6464 chr8 121729797 121729797 + 3.15725 NA intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) -43696 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA Atac153_MAPQ30_peak_1524 chr12 53553618 53553618 + 3.15725 NA intron (NM_001244705, intron 15 of 16) intron (NM_001244705, intron 15 of 16) 4659 NM_001244706 51380 Hs.279815 NM_015989 HPRD:16763 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding Atac153_MAPQ30_peak_4889 chr3 148870894 148870894 + 3.15725 NA intron (NM_032383, intron 6 of 16) intron (NM_032383, intron 6 of 16) 23523 NM_032383 84343 Hs.558314 NM_032383 HPRD:05835 HPS3 SUTAL Hermansky-Pudlak syndrome 3 protein-coding Atac153_MAPQ30_peak_514 chr1 208441239 208441239 + 3.15725 NA Intergenic Intergenic -23574 NM_025179 5362 Hs.497626 NM_025179 HPRD:03033 PLXNA2 OCT|PLXN2 plexin A2 protein-coding Atac153_MAPQ30_peak_3621 chr2 95934491 95934491 + 3.15725 NA Intergenic Intergenic -5710 NM_144707 150696 Hs.437376 NM_144707 HPRD:17912 PROM2 PROML2 prominin 2 protein-coding Atac153_MAPQ30_peak_4036 chr20 23613608 23613608 + 3.15725 NA TTS (NM_000099) TTS (NM_000099) 5077 NM_000099 1471 Hs.304682 NM_000099 HPRD:05056 CST3 ARMD11 cystatin C protein-coding Atac153_MAPQ30_peak_6830 chr9 134746308 134746308 + 3.15725 NA intron (NM_001253881, intron 5 of 6) intron (NM_001253881, intron 5 of 6) -133383 NM_005312 2889 Hs.127897 NM_005312 HPRD:02627 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor (GEF) 1 protein-coding Atac153_MAPQ30_peak_155 chr1 27149291 27149291 + 3.15725 NA Intergenic MLT1J2-int|LTR|ERVL-MaLR -3910 NM_032283 84243 Hs.523710 NM_032283 ZDHHC18 DHHC-18|DHHC18 zinc finger, DHHC-type containing 18 protein-coding Atac153_MAPQ30_peak_1495 chr12 39548038 39548038 + 3.15725 NA Intergenic L1MA2|LINE|L1 -248618 NM_153634 144402 Hs.40910 NM_153634 HPRD:16747 CPNE8 - copine VIII protein-coding Atac153_MAPQ30_peak_4493 chr22 47043609 47043609 + 3.15725 NA intron (NM_015124, intron 2 of 17) intron (NM_015124, intron 2 of 17) 20951 NM_015124 23151 Hs.475150 NM_015124 HPRD:11107 GRAMD4 DIP|dA59H18.1|dJ439F8.1 GRAM domain containing 4 protein-coding Atac153_MAPQ30_peak_5131 chr4 103143731 103143731 + 3.15725 NA Intergenic L2a|LINE|L2 101738 NM_001135148 64116 Hs.288034 NM_022154 HPRD:12286 SLC39A8 BIGM103|LZT-Hs6|ZIP8 solute carrier family 39 (zinc transporter), member 8 protein-coding Atac153_MAPQ30_peak_1881 chr13 113384606 113384606 + 3.15725 NA intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) 24439 NR_109811 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4486 chr22 46770332 46770332 + 3.15725 NA intron (NM_014246, intron 24 of 34) intron (NM_014246, intron 24 of 34) 39034 NM_001282783 55687 Hs.439524 NM_018006 HPRD:15571 TRMU MTO2|MTU1|TRMT|TRMT1|TRNT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding Atac153_MAPQ30_peak_5114 chr4 83561518 83561518 + 3.15725 NA intron (NM_001037582, intron 3 of 4) intron (NM_001037582, intron 3 of 4) -18928 NR_024087 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA Atac153_MAPQ30_peak_142 chr1 23419632 23419632 + 3.15725 NA exon (NM_033631, exon 4 of 5) exon (NM_033631, exon 4 of 5) 48834 NR_036057 100422866 NR_036057 MIR3115 - microRNA 3115 ncRNA Atac153_MAPQ30_peak_4447 chr22 39648591 39648591 + 3.15725 NA Intergenic Intergenic -7634 NM_002608 5155 Hs.1976 NM_002608 HPRD:01815 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet-derived growth factor beta polypeptide protein-coding Atac153_MAPQ30_peak_2423 chr16 17929989 17929989 + 3.15725 NA Intergenic Intergenic -365251 NM_022166 64131 Hs.22907 NM_022166 HPRD:12168 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI xylosyltransferase I protein-coding Atac153_MAPQ30_peak_1462 chr12 13750912 13750912 + 3.15725 NA intron (NM_000834, intron 9 of 12) intron (NM_000834, intron 9 of 12) -221233 NR_036555 283422 Hs.448717 NM_182558 HPRD:08166 C12orf36 - chromosome 12 open reading frame 36 ncRNA Atac153_MAPQ30_peak_915 chr10 115182484 115182484 + 3.15725 NA Intergenic MLT1L|LTR|ERVL-MaLR -128106 NM_001177660 3026 Hs.422542 NM_004132 HPRD:04890 HABP2 FSAP|HABP|HGFAL|PHBP hyaluronan binding protein 2 protein-coding Atac153_MAPQ30_peak_4031 chr20 22984386 22984386 + 3.15725 NA Intergenic Intergenic -31671 NM_001052 6754 Hs.673846 NM_001052 HPRD:01676 SSTR4 SS-4-R|SS4-R|SS4R somatostatin receptor 4 protein-coding Atac153_MAPQ30_peak_2628 chr16 87566922 87566922 + 3.15725 NA Intergenic MLT1H|LTR|ERVL-MaLR 39129 NR_110943 101928737 Hs.579009 NR_110943 ENSG00000260750 LOC101928737 - uncharacterized LOC101928737 ncRNA Atac153_MAPQ30_peak_3170 chr18 77442602 77442602 + 3.15725 NA intron (NM_001202504, intron 1 of 12) intron (NM_001202504, intron 1 of 12) 1172 NM_001202504 9150 Hs.465490 NM_004715 HPRD:05377 CTDP1 CCFDN|FCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding Atac153_MAPQ30_peak_6096 chr7 101870897 101870897 + 3.15725 NA exon (NM_001202543, exon 21 of 24) exon (NM_001202543, exon 21 of 24) -57456 NM_020979 10603 Hs.489448 NM_020979 SH2B2 APS SH2B adaptor protein 2 protein-coding Atac153_MAPQ30_peak_5220 chr5 2606877 2606877 + 3.15725 NA Intergenic Intergenic 144892 NM_001134222 153572 Hs.282089 NM_033267 HPRD:09368 IRX2 IRXA2 iroquois homeobox 2 protein-coding Atac153_MAPQ30_peak_6690 chr9 93602223 93602223 + 3.15725 NA intron (NM_001174167, intron 1 of 13) intron (NM_001174167, intron 1 of 13) 12521 NM_001174167 6850 Hs.371720 NM_003177 HPRD:02514 SYK p72-Syk spleen tyrosine kinase protein-coding Atac153_MAPQ30_peak_6962 chrX 29243688 29243688 + 3.15725 NA intron (NM_014271, intron 2 of 10) MER67D|LTR|ERV1 638007 NM_014271 11141 Hs.658912 NM_014271 IL1RAPL1 IL1R8|IL1RAPL|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein-like 1 protein-coding Atac153_MAPQ30_peak_5170 chr4 155372837 155372837 + 3.15725 NA intron (NM_001142552, intron 1 of 7) ERVL-B4-int|LTR|ERVL 40040 NM_001142552 54798 Hs.655664 NM_017639 HPRD:10858 DCHS2 CDH27|CDHJ|CDHR7|PCDH23|PCDHJ dachsous cadherin-related 2 protein-coding Atac153_MAPQ30_peak_5237 chr5 6119175 6119175 + 3.15725 NA Intergenic Intergenic 218230 NR_028351 401172 Hs.376760 NM_001001702 HPRD:16934 FLJ33360 - FLJ33360 protein ncRNA Atac153_MAPQ30_peak_2149 chr15 44200848 44200848 + 3.15725 NA intron (NM_001286490, intron 6 of 15) intron (NM_001286490, intron 6 of 15) -30479 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 pseudogene 1 pseudo Atac153_MAPQ30_peak_6648 chr9 81117970 81117970 + 3.15725 NA Intergenic Intergenic 205979 NM_021154 29968 Hs.494261 NM_021154 HPRD:17918 PSAT1 EPIP|PSA|PSAT phosphoserine aminotransferase 1 protein-coding Atac153_MAPQ30_peak_2746 chr17 19283694 19283694 + 3.15725 NA intron (NM_139033, intron 3 of 6) MIR3|SINE|MIR 1920 NM_002749 5598 Hs.150136 NM_002749 HPRD:03952 MAPK7 BMK1|ERK4|ERK5|PRKM7 mitogen-activated protein kinase 7 protein-coding Atac153_MAPQ30_peak_1876 chr13 112579019 112579019 + 3.15725 NA Intergenic LTR89|LTR|ERVL? 31209 NR_120401 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA Atac153_MAPQ30_peak_6950 chrX 21832161 21832161 + 3.15725 NA Intergenic Intergenic -25495 NM_015884 51360 Hs.443490 NM_015884 HPRD:02243 MBTPS2 BRESEK|IFAP|KFSD|KFSDX|OLMSX|S2P membrane-bound transcription factor peptidase, site 2 protein-coding Atac153_MAPQ30_peak_4835 chr3 129121595 129121595 + 3.15725 NA intron (NM_207307, intron 7 of 8) intron (NM_207307, intron 7 of 8) -3313 NR_003111 132241 Hs.477537 NR_003111 ENSG00000251474 RPL32P3 - ribosomal protein L32 pseudogene 3 pseudo Atac153_MAPQ30_peak_3908 chr2 234688182 234688182 + 3.15725 NA intron (NM_001287395, intron 2 of 41) intron (NM_001287395, intron 2 of 41) 3857 NM_001287395 339766 Hs.361778 NM_001287395 ENSG00000185038 MROH2A HEATR7B1 maestro heat-like repeat family member 2A protein-coding Atac153_MAPQ30_peak_2869 chr17 53466261 53466261 + 3.15725 NA Intergenic Intergenic 33080 NM_012329 23531 Hs.463483 NM_012329 HPRD:06835 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation-associated protein-coding Atac153_MAPQ30_peak_3979 chr20 2778548 2778548 + 3.15725 NA intron (NM_019609, intron 5 of 13) intron (NM_019609, intron 5 of 13) 2744 NM_019609 56265 Hs.659346 NM_019609 HPRD:07099 CPXM1 CPX1|CPXM carboxypeptidase X (M14 family), member 1 protein-coding Atac153_MAPQ30_peak_1577 chr12 92950801 92950801 + 3.15725 NA Intergenic Intergenic -128877 NM_001025232 574016 Hs.551199 NM_001025232 ENSG00000205057 CLLU1OS - chronic lymphocytic leukemia up-regulated 1 opposite strand protein-coding Atac153_MAPQ30_peak_6020 chr7 55543729 55543729 + 3.15725 NA intron (NM_001284284, intron 4 of 4) intron (NM_001284284, intron 4 of 4) 61680 NM_001284284 81552 Hs.488307 NM_030796 HPRD:08526 VOPP1 ECOP|GASP vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding Atac153_MAPQ30_peak_6926 chrX 17918793 17918793 + 3.15725 NA Intergenic L2a|LINE|L2 -39336 NM_001172739 10742 Hs.446680 NM_021785 HPRD:02199 RAI2 - retinoic acid induced 2 protein-coding Atac153_MAPQ30_peak_1139 chr11 34171780 34171780 + 3.15725 NA TTS (NM_145804) TTS (NM_145804) 44669 NM_001144030 55226 Hs.577281 NM_024662 HPRD:10964 NAT10 ALP|NET43 N-acetyltransferase 10 (GCN5-related) protein-coding Atac153_MAPQ30_peak_4703 chr3 53101710 53101710 + 3.15725 NA Intergenic Intergenic -21621 NM_016329 51460 Hs.343679 NM_016329 HPRD:09539 SFMBT1 RU1|SFMBT|hSFMBT Scm-like with four mbt domains 1 protein-coding Atac153_MAPQ30_peak_2330 chr15 98809257 98809257 + 3.15725 NA Intergenic Intergenic -177275 NR_120325 101927332 NR_120325 LOC101927332 - uncharacterized LOC101927332 ncRNA Atac153_MAPQ30_peak_1449 chr12 5606848 5606848 + 3.15725 NA Intergenic Intergenic 3550 NM_002527 4908 Hs.99171 NM_002527 HPRD:01219 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding Atac153_MAPQ30_peak_4676 chr3 49657012 49657012 + 3.15725 NA intron (NM_003458, intron 1 of 11) MIR|SINE|MIR -54423 NM_001640 327 Hs.517969 NM_001640 HPRD:00034 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding Atac153_MAPQ30_peak_6819 chr9 131776858 131776858 + 3.15725 NA intron (NM_001287045, intron 4 of 12) intron (NM_001287045, intron 4 of 12) 13774 NM_020145 56904 Hs.460238 NM_020145 HPRD:15334 SH3GLB2 PP6569|PP9455|RRIG1 SH3-domain GRB2-like endophilin B2 protein-coding Atac153_MAPQ30_peak_3436 chr2 18265056 18265056 + 3.15725 NA Intergenic HERVP71A-int|LTR|ERV1 205132 NM_002252 3790 Hs.414489 NM_002252 HPRD:04865 KCNS3 KV9.3 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 protein-coding Atac153_MAPQ30_peak_7095 chrX 71327457 71327457 + 3.15725 NA intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) 24294 NM_001024455 340526 Hs.512180 NM_001024455 HPRD:18594 RGAG4 6430402L03Rik|MAR5|MART5 retrotransposon gag domain containing 4 protein-coding Atac153_MAPQ30_peak_1989 chr14 75406584 75406584 + 3.15725 NA Intergenic Intergenic 15883 NM_001293643 5228 Hs.252820 NM_002632 HPRD:03076 PGF D12S1900|PGFL|PLGF|PlGF-2|SHGC-10760 placental growth factor protein-coding Atac153_MAPQ30_peak_5471 chr5 157194931 157194931 + 3.15725 NA Intergenic Intergenic 24176 NM_173491 134353 Hs.631954 NM_173491 LSM11 - LSM11, U7 small nuclear RNA associated protein-coding Atac153_MAPQ30_peak_6216 chr7 155925281 155925281 + 3.15725 NA Intergenic THE1D-int|LTR|ERVL-MaLR 169955 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding Atac153_MAPQ30_peak_6957 chrX 27852577 27852577 + 3.15725 NA Intergenic Intergenic 26470 NM_182506 139422 Hs.447363 NM_182506 HPRD:06554 MAGEB10 - melanoma antigen family B, 10 protein-coding Atac153_MAPQ30_peak_1241 chr11 69597238 69597238 + 3.15725 NA Intergenic Intergenic -7067 NM_002007 2249 Hs.1755 NM_002007 HPRD:01294 FGF4 HBGF-4|HST|HST-1|HSTF1|K-FGF|KFGF fibroblast growth factor 4 protein-coding Atac153_MAPQ30_peak_6824 chr9 133355605 133355605 + 3.15725 NA intron (NM_000050, intron 11 of 15) MIR3|SINE|MIR 35511 NM_000050 445 Hs.160786 NM_000050 HPRD:04590 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding Atac153_MAPQ30_peak_1994 chr14 76605866 76605866 + 3.15725 NA Intergenic MIR|SINE|MIR -12362 NM_017926 55668 Hs.410231 NM_017926 HPRD:16594 GPATCH2L C14orf118 G patch domain containing 2-like protein-coding Atac153_MAPQ30_peak_7136 chrX 102018528 102018528 + 3.15725 NA Intergenic Intergenic -5567 NR_038988 100287765 Hs.687084 NR_038988 ENSG00000223546 LINC00630 LL0XNC01-157D4.1|LL0XNC01-237H1.2 long intergenic non-protein coding RNA 630 ncRNA Atac153_MAPQ30_peak_5056 chr4 31763761 31763761 + 3.15725 NA Intergenic LTR16E1|LTR|ERVL 1041724 NM_032457 5099 Hs.479439 NM_002589 HPRD:04288 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding Atac153_MAPQ30_peak_3538 chr2 52698108 52698108 + 3.15725 NA Intergenic THE1D-int|LTR|ERVL-MaLR -1296821 NM_001008708 494143 Hs.585944 NM_001008708 HPRD:17418 CHAC2 - ChaC, cation transport regulator homolog 2 (E. coli) protein-coding Atac153_MAPQ30_peak_2496 chr16 49236832 49236832 + 3.15725 NA Intergenic MLT1I|LTR|ERVL-MaLR 78910 NM_004352 869 Hs.458423 NM_004352 HPRD:02697 CBLN1 - cerebellin 1 precursor protein-coding Atac153_MAPQ30_peak_3683 chr2 119668432 119668432 + 3.15725 NA Intergenic MLT1I|LTR|ERVL-MaLR -31313 NM_006770 8685 Hs.67726 NM_006770 HPRD:05337 MARCO SCARA2 macrophage receptor with collagenous structure protein-coding Atac153_MAPQ30_peak_5871 chr6 169789893 169789893 + 3.15725 NA Intergenic LTR27|LTR|ERV1 -135684 NM_003247 7058 Hs.371147 NM_003247 HPRD:01766 THBS2 TSP2 thrombospondin 2 protein-coding Atac153_MAPQ30_peak_4836 chr3 129236274 129236274 + 3.15725 NA intron (NM_052989, intron 26 of 29) intron (NM_052989, intron 26 of 29) -11208 NM_000539 6010 Hs.247565 NM_000539 HPRD:01584 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding Atac153_MAPQ30_peak_4957 chr4 1041849 1041849 + 3.15725 NA Intergenic Intergenic 35597 NM_021923 53834 Hs.193326 NM_021923 HPRD:16163 FGFRL1 FGFR5|FHFR fibroblast growth factor receptor-like 1 protein-coding Atac153_MAPQ30_peak_202 chr1 37411238 37411238 + 3.15725 NA intron (NM_000831, intron 1 of 15) intron (NM_000831, intron 1 of 15) 88606 NM_000831 2899 Hs.128848 NM_000831 HPRD:00691 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate receptor, ionotropic, kainate 3 protein-coding Atac153_MAPQ30_peak_1450 chr12 5732890 5732890 + 3.15725 NA intron (NM_001278596, intron 17 of 25) intron (NM_001278596, intron 17 of 25) 129592 NM_002527 4908 Hs.99171 NM_002527 HPRD:01219 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding Atac153_MAPQ30_peak_6554 chr8 143608303 143608303 + 3.15725 NA intron (NM_001702, intron 23 of 29) intron (NM_001702, intron 23 of 29) 62926 NM_001702 575 Hs.194654 NM_001702 HPRD:04062 BAI1 GDAIF brain-specific angiogenesis inhibitor 1 protein-coding Atac153_MAPQ30_peak_6770 chr9 117188043 117188043 + 3.15725 NA intron (NM_001083885, intron 4 of 11) intron (NM_001083885, intron 4 of 11) -31358 NM_030767 80709 Hs.494895 NM_030767 HPRD:16148 AKNA - AT-hook transcription factor protein-coding Atac153_MAPQ30_peak_7046 chrX 55465664 55465664 + 3.15725 NA Intergenic L1M1|LINE|L1 -12229 NR_039764 100616155 NR_039764 MIR4536-1 MIR4536|hsa-mir-4536-1 microRNA 4536-1 ncRNA Atac153_MAPQ30_peak_7202 chrX 125789025 125789025 + 3.15725 NA Intergenic MLT1E1A|LTR|ERVL-MaLR -102183 NM_178470 139170 Hs.120403 NM_178470 HPRD:06604 DCAF12L1 KIAA1892L|WDR40B DDB1 and CUL4 associated factor 12-like 1 protein-coding Atac153_MAPQ30_peak_6587 chr9 14260208 14260208 + 3.15725 NA intron (NM_005596, intron 2 of 8) intron (NM_005596, intron 2 of 8) 53837 NM_005596 4781 Hs.644095 NM_005596 HPRD:09008 NFIB CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I/B protein-coding Atac153_MAPQ30_peak_6846 chr9 137604972 137604972 + 3.15725 NA intron (NM_001278074, intron 4 of 65) intron (NM_001278074, intron 4 of 65) 71321 NM_000093 1289 Hs.210283 NM_000093 HPRD:00368 COL5A1 - collagen, type V, alpha 1 protein-coding Atac153_MAPQ30_peak_5270 chr5 14124060 14124060 + 3.15725 NA Intergenic LTR79|LTR|ERVL -19769 NM_007118 7204 Hs.130031 NM_007118 HPRD:03537 TRIO ARHGEF23|tgat trio Rho guanine nucleotide exchange factor protein-coding Atac153_MAPQ30_peak_7270 chrX 148787488 148787488 + 3.15725 NA intron (NM_001011544, intron 2 of 4) intron (NM_001011544, intron 2 of 4) -6250 NM_005366 4110 Hs.670252 NM_005366 HPRD:02281 MAGEA11 CT1.11|MAGE-11|MAGE11|MAGEA-11 melanoma antigen family A, 11 protein-coding Atac153_MAPQ30_peak_3901 chr2 232726634 232726634 + 3.15725 NA Intergenic MLT1K|LTR|ERVL-MaLR 30374 NR_031717 100302126 NR_031717 miRBase:MI0007076 MIR1471 MIRN1471|hsa-mir-1471 microRNA 1471 ncRNA Atac153_MAPQ30_peak_1690 chr12 124416408 124416408 + 3.15725 NA intron (NM_207437, intron 74 of 77) intron (NM_207437, intron 74 of 77) 40755 NM_025140 80212 Hs.713131 NM_025140 HPRD:16919 CCDC92 - coiled-coil domain containing 92 protein-coding Atac153_MAPQ30_peak_1697 chr12 125065084 125065084 + 3.15725 NA Intergenic MIRb|SINE|MIR -13074 NM_001206654 9612 Hs.137510 NM_006312 HPRD:02910 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding Atac153_MAPQ30_peak_17 chr1 3113781 3113781 + 3.15725 NA intron (NM_022114, intron 2 of 16) MIR3|SINE|MIR 69242 NR_036215 100422968 NR_036215 MIR4251 - microRNA 4251 ncRNA Atac153_MAPQ30_peak_3463 chr2 26412944 26412944 + 3.15725 NA TTS (NM_001191033) TTS (NM_001191033) 9359 NM_001191033 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREML FAM59B GRB2 associated, regulator of MAPK1-like protein-coding Atac153_MAPQ30_peak_6093 chr7 101234658 101234658 + 3.15725 NA Intergenic L2c|LINE|L2 -22372 NR_103747 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA Atac153_MAPQ30_peak_1490 chr12 33376103 33376103 + 3.15725 NA Intergenic L1PA13|LINE|L1 216651 NM_198992 341359 Hs.118703 NM_198992 SYT10 - synaptotagmin X protein-coding Atac153_MAPQ30_peak_3843 chr2 206723001 206723001 + 3.15725 NA Intergenic Intergenic 175777 NM_201264 8828 Hs.471200 NM_003872 HPRD:03643 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding Atac153_MAPQ30_peak_7066 chrX 64368055 64368055 + 3.15725 NA Intergenic L1MA8|LINE|L1 -113431 NM_001243804 55906 Hs.28249 NM_018684 HPRD:06584 ZC4H2 HCA127|KIAA1166|WRWF|WWS zinc finger, C4H2 domain containing protein-coding Atac153_MAPQ30_peak_845 chr10 87134398 87134398 + 3.15725 NA Intergenic MLT1D|LTR|ERVL-MaLR 58130 NR_120669 101929646 Hs.116129 NR_120669 LOC101929646 - uncharacterized LOC101929646 ncRNA Atac153_MAPQ30_peak_1016 chr10 132959115 132959115 + 3.15725 NA intron (NM_174937, intron 6 of 11) intron (NM_174937, intron 6 of 11) 65634 NR_120623 101927489 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2511 chr16 54843121 54843121 + 3.15725 NA Intergenic Intergenic 119569 NR_034106 643911 Hs.237396 NR_034105 CRNDE LINC00180|NCRNA00180 colorectal neoplasia differentially expressed (non-protein coding) ncRNA Atac153_MAPQ30_peak_6984 chrX 38629494 38629494 + 3.15725 NA Intergenic Intergenic -31191 NM_021242 58526 Hs.522605 NM_021242 HPRD:06732 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding Atac153_MAPQ30_peak_1072 chr11 8279208 8279208 + 3.15725 NA intron (NM_001270428, intron 1 of 3) intron (NM_001270428, intron 1 of 3) 6217 NR_073006 4004 Hs.654426 NM_002315 HPRD:01738 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 (rhombotin 1) protein-coding Atac153_MAPQ30_peak_4691 chr3 51708362 51708362 + 3.15725 NA exon (NM_001129884, exon 3 of 6) exon (NM_001129884, exon 3 of 6) 2719 NR_103463 51368 Hs.517864 NM_015926 HPRD:15492 TEX264 ZSIG11 testis expressed 264 protein-coding Atac153_MAPQ30_peak_1387 chr11 129287476 129287476 + 3.15725 NA intron (NM_003658, intron 1 of 3) intron (NM_003658, intron 1 of 3) 41595 NM_003658 8538 Hs.591944 NM_003658 HPRD:16074 BARX2 - BARX homeobox 2 protein-coding Atac153_MAPQ30_peak_730 chr10 45531941 45531941 + 3.15725 NA Intergenic Intergenic -35471 NM_001039380 220979 Hs.707791 NM_001039380 ENSG00000165511 C10orf25 - chromosome 10 open reading frame 25 protein-coding Atac153_MAPQ30_peak_2872 chr17 55481081 55481081 + 3.15725 NA intron (NM_138962, intron 6 of 13) intron (NM_138962, intron 6 of 13) 119877 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA Atac153_MAPQ30_peak_4681 chr3 50395992 50395992 + 3.15725 NA exon (NM_007024, exon 1 of 2) exon (NM_007024, exon 1 of 2) 947 NM_007024 11070 Hs.91566 NM_007024 HPRD:06144 TMEM115 PL6 transmembrane protein 115 protein-coding Atac153_MAPQ30_peak_3680 chr2 118699231 118699231 + 3.15725 NA intron (NM_019044, intron 18 of 23) intron (NM_019044, intron 18 of 23) 72508 NM_019044 54520 Hs.107845 NM_019044 HPRD:08557 CCDC93 - coiled-coil domain containing 93 protein-coding Atac153_MAPQ30_peak_6278 chr8 11088800 11088800 + 3.15725 NA Intergenic Intergenic -29925 NM_173683 286046 Hs.657083 NM_173683 HPRD:12926 XKR6 C8orf21|C8orf5|C8orf7|XRG6 XK, Kell blood group complex subunit-related family, member 6 protein-coding Atac153_MAPQ30_peak_5692 chr6 43824311 43824311 + 3.15725 NA Intergenic MIR3|SINE|MIR -34454 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 - long intergenic non-protein coding RNA 1512 ncRNA Atac153_MAPQ30_peak_6566 chr8 145174164 145174164 + 3.15725 NA TTS (NR_024207) TTS (NR_024207) 11535 NR_024207 340390 Hs.98723 NM_032529 HPRD:11168 KIAA1875 - KIAA1875 ncRNA Atac153_MAPQ30_peak_5971 chr7 37317120 37317120 + 3.15725 NA intron (NM_001206480, intron 4 of 21) intron (NM_001206480, intron 4 of 21) 76152 NM_001206482 9844 Hs.434989 NM_014800 HPRD:12102 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding Atac153_MAPQ30_peak_2373 chr16 6653834 6653834 + 3.15725 NA intron (NM_018723, intron 2 of 15) intron (NM_018723, intron 2 of 15) -169976 NM_001142334 54715 Hs.459842 NM_018723 HPRD:16091 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding Atac153_MAPQ30_peak_3699 chr2 121751914 121751914 + 3.15725 NA Intergenic MLT1H-int|LTR|ERVL-MaLR 197047 NM_005270 2736 Hs.111867 NM_005270 HPRD:01312 GLI2 HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding Atac153_MAPQ30_peak_8 chr1 1501050 1501050 + 3.15725 NA intron (NM_014188, intron 1 of 4) intron (NM_014188, intron 1 of 4) 9212 NM_014188 29101 Hs.30026 NM_014188 HPRD:13712 SSU72 HSPC182|PNAS-120 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5292 chr5 33549772 33549772 + 3.15725 NA intron (NM_030955, intron 20 of 23) MIRb|SINE|MIR 108890 NR_047677 6897 Hs.481860 NM_152295 HPRD:01762 TARS ThrRS threonyl-tRNA synthetase protein-coding Atac153_MAPQ30_peak_218 chr1 41088326 41088326 + 3.15725 NA 3' UTR (NM_014747, exon 8 of 8) 3' UTR (NM_014747, exon 8 of 8) 42998 NM_014747 9783 Hs.654808 NM_014747 HPRD:17976 RIMS3 NIM3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding Atac153_MAPQ30_peak_6996 chrX 40299086 40299086 + 3.15725 NA Intergenic MIR3|SINE|MIR -141130 NM_005765 10159 Hs.495960 NM_005765 HPRD:06454 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase, H+ transporting, lysosomal accessory protein 2 protein-coding Atac153_MAPQ30_peak_2866 chr17 52687716 52687716 + 3.15725 NA Intergenic L2|LINE|L2 -290336 NM_005486 10040 Hs.153504 NM_005486 HPRD:05266 TOM1L1 OK/KNS-CL.3|SRCASM target of myb1 (chicken)-like 1 protein-coding Atac153_MAPQ30_peak_586 chr1 231552400 231552400 + 3.15725 NA intron (NM_022051, intron 1 of 4) AluJo|SINE|Alu 8390 NM_022051 54583 Hs.444450 NM_022051 HPRD:06971 EGLN1 C1orf12|ECYT3|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia-inducible factor 1 protein-coding Atac153_MAPQ30_peak_3710 chr2 128004409 128004409 + 3.15725 NA Intergenic AluJb|SINE|Alu -41066 NM_001001665 339761 Hs.407639 NM_001001665 HPRD:13360 CYP27C1 - cytochrome P450, family 27, subfamily C, polypeptide 1 protein-coding Atac153_MAPQ30_peak_1843 chr13 95780871 95780871 + 3.15725 NA intron (NM_001105515, intron 19 of 20) intron (NM_001105515, intron 19 of 20) 172816 NM_001105515 10257 Hs.508423 NM_005845 HPRD:05583 ABCC4 EST170205|MOAT-B|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding Atac153_MAPQ30_peak_4999 chr4 7077228 7077228 + 3.15725 NA Intergenic Intergenic -7428 NM_025196 80273 Hs.443723 NM_025196 GRPEL1 HMGE GrpE-like 1, mitochondrial (E. coli) protein-coding Atac153_MAPQ30_peak_2834 chr17 42064524 42064524 + 3.15725 NA intron (NM_004160, intron 1 of 6) intron (NM_004160, intron 1 of 6) 17313 NM_004160 5697 Hs.169249 NM_004160 HPRD:02869 PYY PYY-I|PYY1 peptide YY protein-coding Atac153_MAPQ30_peak_6636 chr9 74322601 74322601 + 3.15725 NA intron (NM_013390, intron 17 of 23) intron (NM_013390, intron 17 of 23) 61199 NM_013390 23670 Hs.494146 NM_013390 HPRD:09317 TMEM2 - transmembrane protein 2 protein-coding Atac153_MAPQ30_peak_5933 chr7 26008371 26008371 + 3.15725 NA Intergenic Intergenic -18765 NR_029597 406940 NR_029597 miRBase:MI0000253 MIR148A MIRN148|MIRN148A|hsa-mir-148 microRNA 148a ncRNA Atac153_MAPQ30_peak_4336 chr22 18921324 18921324 + 3.15725 NA intron (NM_001195226, intron 1 of 13) intron (NM_001195226, intron 1 of 13) 2640 NM_001195226 5625 Hs.517352 NM_016335 HPRD:08433 PRODH HSPOX2|PIG6|POX|PRODH1|PRODH2|TP53I6 proline dehydrogenase (oxidase) 1 protein-coding Atac153_MAPQ30_peak_3676 chr2 111858404 111858404 + 3.15725 NA non-coding (NR_122074, exon 4 of 4) non-coding (NR_122074, exon 4 of 4) 14761 NR_122074 400997 Hs.652337 NR_122074 HPRD:16971 LOC400997 - uncharacterized LOC400997 ncRNA Atac153_MAPQ30_peak_5631 chr6 30656739 30656739 + 3.15725 NA intron (NM_001270710, intron 1 of 1).5 intron (NM_001270710, intron 1 of 1).5 -1067 NM_133471 170954 Hs.101150 NM_133471 ENSG00000146112 PPP1R18 HKMT1098|KIAA1949 protein phosphatase 1, regulatory subunit 18 protein-coding Atac153_MAPQ30_peak_3194 chr19 3766713 3766713 + 3.15725 NA intron (NM_172251, intron 2 of 2) L2b|LINE|L2 4048 NM_172251 116541 Hs.356578 NM_172251 HPRD:14772 MRPL54 L54mt|MRP-L54 mitochondrial ribosomal protein L54 protein-coding Atac153_MAPQ30_peak_2361 chr16 3190538 3190538 + 3.15725 NA intron (NR_104432, intron 5 of 5) MIR|SINE|MIR 5404 NM_001134655 7760 Hs.115284 NM_004220 HPRD:12224 ZNF213 CR53|ZKSCAN21|ZSCAN53 zinc finger protein 213 protein-coding Atac153_MAPQ30_peak_552 chr1 226143482 226143482 + 3.15725 NA Intergenic Intergenic -14399 NM_003240 7044 Hs.520187 NM_003240 HPRD:03526 LEFTY2 EBAF|LEFTA|LEFTYA|TGFB4 left-right determination factor 2 protein-coding Atac153_MAPQ30_peak_4434 chr22 37523357 37523357 + 3.15725 NA 3' UTR (NM_000878, exon 10 of 10) 3' UTR (NM_000878, exon 10 of 10) -17754 NM_001289000 164656 Hs.370885 NM_153609 HPRD:10270 TMPRSS6 IRIDA transmembrane protease, serine 6 protein-coding Atac153_MAPQ30_peak_4439 chr22 38455498 38455498 + 3.15725 NA intron (NM_001039584, intron 3 of 12) L2a|LINE|L2 2236 NM_012407 9463 Hs.180871 NM_012407 HPRD:16176 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding Atac153_MAPQ30_peak_111 chr1 18345738 18345738 + 3.15725 NA Intergenic Intergenic -88502 NM_032880 84966 Hs.212511 NM_032880 HPRD:11309 IGSF21 - immunoglobin superfamily, member 21 protein-coding Atac153_MAPQ30_peak_4828 chr3 127973691 127973691 + 3.15725 NA intron (NM_021937, intron 2 of 6) intron (NM_021937, intron 2 of 6) 101378 NM_021937 60678 Hs.477498 NM_021937 HPRD:07409 EEFSEC EFSEC|SELB eukaryotic elongation factor, selenocysteine-tRNA-specific protein-coding Atac153_MAPQ30_peak_3517 chr2 44318657 44318657 + 3.15725 NA Intergenic Intergenic -77285 NM_177969 5495 Hs.416769 NM_002706 HPRD:04796 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent, 1B protein-coding Atac153_MAPQ30_peak_2705 chr17 10532991 10532991 + 3.15725 NA exon (NM_002470, exon 40 of 41) exon (NM_002470, exon 40 of 41) 27635 NM_002470 4621 Hs.440895 NM_002470 HPRD:01172 MYH3 HEMHC|MYHC-EMB|MYHSE1|SMHCE myosin, heavy chain 3, skeletal muscle, embryonic protein-coding Atac153_MAPQ30_peak_33 chr1 5554067 5554067 + 3.15725 NA Intergenic Intergenic -70064 NR_039612 100616489 NR_039612 miRBase:MI0016753 MIR4417 - microRNA 4417 ncRNA Atac153_MAPQ30_peak_5474 chr5 160351847 160351847 + 3.15725 NA Intergenic Intergenic 13786 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LOC285629 - uncharacterized LOC285629 ncRNA Atac153_MAPQ30_peak_268 chr1 54921814 54921814 + 3.15725 NA Intergenic Intergenic -49746 NM_018070 23648 Hs.476706 NM_018070 HPRD:09578 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding Atac153_MAPQ30_peak_6428 chr8 97193349 97193349 + 3.15725 NA Intergenic Intergenic -20329 NM_001001557 392255 Hs.492277 NM_001001557 HPRD:11002 GDF6 BMP-13|BMP13|CDMP2|KFM|KFS|KFS1|KFSL|LCA17|MCOP4|MCOPCB6|SCDO4|SGM1 growth differentiation factor 6 protein-coding Atac153_MAPQ30_peak_7069 chrX 65083235 65083235 + 3.15725 NA Intergenic Intergenic -155477 NR_029637 407008 NR_029637 miRBase:MI0000300 MIR223 MIRN223|miRNA223|mir-223 microRNA 223 ncRNA Atac153_MAPQ30_peak_3018 chr18 11868473 11868473 + 3.15725 NA intron (NM_001261444, intron 4 of 7) intron (NM_001261444, intron 4 of 7) 11036 NM_001261444 2774 Hs.136295 NM_002071 HPRD:00758 GNAL DYT25 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type protein-coding Atac153_MAPQ30_peak_3916 chr2 235582709 235582709 + 3.15725 NA Intergenic Intergenic -177012 NM_001282431 10123 Hs.111554 NM_005737 HPRD:11988 ARL4C ARL7|LAK ADP-ribosylation factor-like 4C protein-coding Atac153_MAPQ30_peak_3147 chr18 73221324 73221324 + 3.15725 NA Intergenic L1PBa|LINE|L1 -81735 NM_001037331 284274 Hs.666744 NM_001037331 SMIM21 C18orf62 small integral membrane protein 21 protein-coding Atac153_MAPQ30_peak_1911 chr14 44115257 44115257 + 3.15725 NA Intergenic L1PB2|LINE|L1 861242 NM_032135 84075 Hs.307086 NM_032135 HPRD:12638 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding Atac153_MAPQ30_peak_7310 chrY 58983270 58983270 + 3.15725 NA Intergenic AluJo|SINE|Alu -117187 NM_005840 10251 Hs.381912 NM_005840 HPRD:03917 SPRY3 HSPRY3|spry-3 sprouty homolog 3 (Drosophila) protein-coding Atac153_MAPQ30_peak_4320 chr21 45968849 45968849 + 3.15725 NA intron (NM_144991, intron 2 of 11) LTR10D|LTR|ERV1 2539 NM_198693 386679 Hs.664660 NM_198693 HPRD:11188 KRTAP10-2 KAP10.2|KAP18-2|KAP18.2|KRTAP10.2|KRTAP18-2|KRTAP18.2 keratin associated protein 10-2 protein-coding Atac153_MAPQ30_peak_1261 chr11 72469032 72469032 + 3.15725 NA intron (NM_006645, intron 4 of 6) intron (NM_006645, intron 4 of 6) -5598 NM_001040118 116985 Hs.503165 NM_015242 HPRD:09440 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding Atac153_MAPQ30_peak_345 chr1 117112326 117112326 + 3.15725 NA intron (NM_001144822, intron 1 of 4) AluJb|SINE|Alu 1389 NR_026665 965 Hs.34341 NM_001779 HPRD:01081 CD58 LFA-3|LFA3|ag3 CD58 molecule protein-coding Atac153_MAPQ30_peak_2521 chr16 57417705 57417705 + 3.15725 NA 3' UTR (NM_002996, exon 3 of 3) 3' UTR (NM_002996, exon 3 of 3) 11291 NM_002996 6376 Hs.531668 NM_002996 HPRD:03529 CX3CL1 ABCD-3|C3Xkine|CXC3|CXC3C|NTN|NTT|SCYD1|fractalkine|neurotactin chemokine (C-X3-C motif) ligand 1 protein-coding Atac153_MAPQ30_peak_6245 chr8 1693695 1693695 + 3.15725 NA Intergenic Intergenic -18175 NM_018941 2055 Hs.127675 NM_018941 HPRD:06383 CLN8 C8orf61|EPMR ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) protein-coding Atac153_MAPQ30_peak_3307 chr19 42315491 42315491 + 3.15725 NA TTS (NM_001277163) TTS (NM_001277163) 14969 NM_001815 1084 Hs.11 NM_001815 HPRD:16450 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen-related cell adhesion molecule 3 protein-coding Atac153_MAPQ30_peak_5654 chr6 36321312 36321312 + 3.15725 NA TTS (NM_001207035) TTS (NM_001207035) -16650 NM_001010903 389384 Hs.162104 NM_001010903 HPRD:16824 C6orf222 - chromosome 6 open reading frame 222 protein-coding Atac153_MAPQ30_peak_1948 chr14 64763016 64763016 + 3.15725 NA intron (NM_001291723, intron 1 of 8) MIRb|SINE|MIR -1888 NM_001437 2100 Hs.660607 NM_001437 HPRD:03390 ESR2 ER-BETA|ESR-BETA|ESRB|ESTRB|Erb|NR3A2 estrogen receptor 2 (ER beta) protein-coding Atac153_MAPQ30_peak_5734 chr6 90642226 90642226 + 3.15725 NA exon (NM_001170794, exon 7 of 7) exon (NM_001170794, exon 7 of 7) 38038 NM_032602 84694 Hs.334499 NM_032602 HPRD:13104 GJA10 CX62 gap junction protein, alpha 10, 62kDa protein-coding Atac153_MAPQ30_peak_798 chr10 73653184 73653184 + 3.15725 NA Intergenic MER20B|DNA|hAT-Charlie -42102 NM_001042466 5660 Hs.523004 NM_002778 HPRD:01460 PSAP GLBA|SAP1 prosaposin protein-coding Atac153_MAPQ30_peak_5349 chr5 80983806 80983806 + 3.15725 NA intron (NM_001256735, intron 1 of 15) L1MA3|LINE|L1 63266 NM_001256732 23635 Hs.102735 NM_012446 SSBP2 HSPC116|SOSS-B2 single-stranded DNA binding protein 2 protein-coding Atac153_MAPQ30_peak_1199 chr11 60524704 60524704 + 3.15725 NA intron (NM_152717, intron 1 of 5) intron (NM_152717, intron 1 of 5) 364 NR_103481 219995 Hs.207465 NM_152717 HPRD:17532 MS4A15 - membrane-spanning 4-domains, subfamily A, member 15 protein-coding Atac153_MAPQ30_peak_3447 chr2 20684572 20684572 + 3.15725 NA Intergenic MLT1A|LTR|ERVL-MaLR 37737 NM_004040 388 Hs.502876 NM_004040 HPRD:01321 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding Atac153_MAPQ30_peak_7163 chrX 110034019 110034019 + 3.15725 NA intron (NM_001143981, intron 2 of 11) intron (NM_001143981, intron 2 of 11) 5057 NM_145234 91851 Hs.496587 NM_145234 HPRD:02285 CHRDL1 CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1 chordin-like 1 protein-coding Atac153_MAPQ30_peak_7022 chrX 48676594 48676594 + 3.15725 NA intron (NM_006044, intron 21 of 28) intron (NM_006044, intron 21 of 28) -8329 NM_181532 3266 Hs.447330 NM_181532 ERAS HRAS2|HRASP ES cell expressed Ras protein-coding Atac153_MAPQ30_peak_7024 chrX 48919224 48919224 + 3.15725 NA intron (NM_001163323, intron 1 of 9) L2a|LINE|L2 2727 NM_001163322 90060 Hs.522643 NM_033626 HPRD:06595 CCDC120 - coiled-coil domain containing 120 protein-coding Atac153_MAPQ30_peak_4134 chr20 45830612 45830612 + 3.15725 NA Intergenic Intergenic 35003 NR_037410 100500814 NR_037410 MIR3616 - microRNA 3616 ncRNA Atac153_MAPQ30_peak_2141 chr15 42127305 42127305 + 3.15725 NA exon (NM_001198588, exon 3 of 24) exon (NM_001198588, exon 3 of 24) -3706 NM_001114633 100137049 Hs.198161 NM_001114633 ENSG00000243708 PLA2G4B HsT16992|cPLA2-beta phospholipase A2, group IVB (cytosolic) protein-coding Atac153_MAPQ30_peak_5112 chr4 79456007 79456007 + 3.15725 NA intron (NM_025074, intron 71 of 73) MIRc|SINE|MIR -16735 NM_005139 306 Hs.480042 NM_005139 HPRD:00111 ANXA3 ANX3 annexin A3 protein-coding Atac153_MAPQ30_peak_5190 chr4 178269549 178269549 + 3.15725 NA intron (NM_018248, intron 6 of 9) intron (NM_018248, intron 6 of 9) 38558 NM_018248 55247 Hs.405467 NM_018248 HPRD:16407 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei endonuclease VIII-like 3 (E. coli) protein-coding Atac153_MAPQ30_peak_3907 chr2 234216610 234216610 + 3.15725 NA 5' UTR (NM_000541, exon 1 of 16) 5' UTR (NM_000541, exon 1 of 16) 301 NM_000541 6295 Hs.32721 NM_000541 HPRD:01625 SAG RP47|S-AG S-antigen; retina and pineal gland (arrestin) protein-coding Atac153_MAPQ30_peak_5945 chr7 28603896 28603896 + 3.15725 NA intron (NM_182898, intron 4 of 10) intron (NM_182898, intron 4 of 10) -121825 NM_001011666 9586 Hs.437075 NM_004904 HPRD:09896 CREB5 CRE-BPA cAMP responsive element binding protein 5 protein-coding Atac153_MAPQ30_peak_6264 chr8 5978592 5978592 + 3.15725 NA Intergenic Intergenic 285477 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA Atac153_MAPQ30_peak_181 chr1 34102822 34102822 + 3.15725 NA intron (NM_052896, intron 29 of 69) intron (NM_052896, intron 29 of 69) 164590 NM_145238 7579 Hs.442705 NM_145238 HPRD:15769 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding Atac153_MAPQ30_peak_7186 chrX 120751241 120751241 + 3.15725 NA Intergenic HSMAR1|DNA|TcMar-Mariner 569779 NM_012084 2747 Hs.368538 NM_012084 HPRD:02143 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding Atac153_MAPQ30_peak_914 chr10 114893911 114893911 + 3.15725 NA intron (NM_001146283, intron 5 of 12) intron (NM_001146283, intron 5 of 12) 183902 NM_001146286 6934 Hs.593995 NM_030756 HPRD:03751 TCF7L2 TCF-4|TCF4 transcription factor 7-like 2 (T-cell specific, HMG-box) protein-coding Atac153_MAPQ30_peak_825 chr10 80920361 80920361 + 3.15725 NA intron (NM_020338, intron 3 of 24) MIR|SINE|MIR 91569 NM_020338 57178 Hs.193118 NM_020338 HPRD:12115 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 zinc finger, MIZ-type containing 1 protein-coding Atac153_MAPQ30_peak_6047 chr7 68356576 68356576 + 3.15725 NA Intergenic MSTB|LTR|ERVL-MaLR 705905 NR_108105 100507468 Hs.362492 NR_108105 LOC100507468 - uncharacterized LOC100507468 ncRNA Atac153_MAPQ30_peak_1095 chr11 13784344 13784344 + 3.15725 NA Intergenic MLT1I|LTR|ERVL-MaLR 94138 NM_032228 84188 Hs.501991 NM_032228 HPRD:14724 FAR1 MLSTD2|SDR10E1 fatty acyl CoA reductase 1 protein-coding Atac153_MAPQ30_peak_6059 chr7 71695504 71695504 + 3.15725 NA intron (NM_031468, intron 3 of 6) AluJb|SINE|Alu 106704 NM_001017440 83698 Hs.592750 NM_031468 HPRD:06209 CALN1 CABP8 calneuron 1 protein-coding Atac153_MAPQ30_peak_4580 chr3 14106387 14106387 + 3.15725 NA non-coding (NR_002223, exon 3 of 3) non-coding (NR_002223, exon 3 of 3) 59984 NM_001098502 131474 Hs.517815 NM_144636 HPRD:13045 CHCHD4 MIA40|TIMM40 coiled-coil-helix-coiled-coil-helix domain containing 4 protein-coding Atac153_MAPQ30_peak_6000 chr7 50355237 50355237 + 3.15725 NA intron (NM_001291837, intron 1 of 6) intron (NM_001291837, intron 1 of 6) -3407 NM_001291841 10320 Hs.435949 NM_006060 HPRD:04318 IKZF1 Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 (Ikaros) protein-coding Atac153_MAPQ30_peak_3877 chr2 220469382 220469382 + 3.15725 NA intron (NM_052902, intron 7 of 24) MER31-int|LTR|ERV1 6786 NM_052902 114790 Hs.22410 NM_052902 HPRD:06207 STK11IP LIP1|LKB1IP|STK11IP1 serine/threonine kinase 11 interacting protein protein-coding Atac153_MAPQ30_peak_5987 chr7 46365054 46365054 + 3.15725 NA Intergenic L2|LINE|L2 -404183 NM_001013398 3486 Hs.450230 NM_000598 HPRD:00899 IGFBP3 BP-53|IBP3 insulin-like growth factor binding protein 3 protein-coding Atac153_MAPQ30_peak_5 chr1 904455 904455 + 3.15725 NA intron (NM_032129, intron 2 of 15) MER63B|DNA|hAT-Blackjack 2578 NM_032129 84069 Hs.528691 NM_032129 HPRD:13190 PLEKHN1 - pleckstrin homology domain containing, family N member 1 protein-coding Atac153_MAPQ30_peak_4339 chr22 20760869 20760869 + 3.15725 NA exon (NM_003426, exon 5 of 5) exon (NM_003426, exon 5 of 5) 12464 NM_001256524 7625 Hs.517418 NM_003426 HPRD:01928 ZNF74 COS52|ZFP520|ZNF520|hZNF7 zinc finger protein 74 protein-coding Atac153_MAPQ30_peak_1106 chr11 16915192 16915192 + 3.15725 NA intron (NM_175058, intron 3 of 22) intron (NM_175058, intron 3 of 22) 120771 NM_175058 144100 Hs.12332 NM_175058 HPRD:15142 PLEKHA7 - pleckstrin homology domain containing, family A member 7 protein-coding Atac153_MAPQ30_peak_6222 chr7 157255324 157255324 + 3.15725 NA Intergenic Intergenic -3601 NR_110157 101927914 Hs.623826 NR_110157 LOC101927914 - uncharacterized LOC101927914 ncRNA Atac153_MAPQ30_peak_1611 chr12 105961999 105961999 + 3.15725 NA Intergenic MLT1C|LTR|ERVL-MaLR -135982 NR_110108 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility candidate 18 (non-protein coding) ncRNA Atac153_MAPQ30_peak_65 chr1 10823246 10823246 + 3.15725 NA intron (NM_017766, intron 1 of 15) intron (NM_017766, intron 1 of 15) 33487 NM_001079843 54897 Hs.439894 NM_017766 HPRD:07897 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding Atac153_MAPQ30_peak_5210 chr5 387895 387895 + 3.15725 NA intron (NM_020731, intron 4 of 11) MLT1C|LTR|ERVL-MaLR 55363 NM_138464 116349 Hs.446702 NM_138464 ENSG00000221990 C5orf55 - chromosome 5 open reading frame 55 protein-coding Atac153_MAPQ30_peak_2174 chr15 58844243 58844243 + 3.15725 NA intron (NM_000236, intron 6 of 8) intron (NM_000236, intron 6 of 8) -53309 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LOC101928694 - uncharacterized LOC101928694 ncRNA Atac153_MAPQ30_peak_7120 chrX 84486636 84486636 + 3.15725 NA Intergenic L1MA3|LINE|L1 -12361 NM_021998 7552 Hs.326801 NM_021998 HPRD:02446 ZNF711 CMPX1|MRX97|ZNF4|ZNF5|ZNF6|Zfp711|dJ75N13.1 zinc finger protein 711 protein-coding Atac153_MAPQ30_peak_4142 chr20 47720030 47720030 + 3.15725 NA Intergenic Intergenic 57247 NR_045796 1434 Hs.90073 NM_001316 HPRD:03217 CSE1L CAS|CSE1|XPO2 CSE1 chromosome segregation 1-like (yeast) protein-coding Atac153_MAPQ30_peak_4361 chr22 25633411 25633411 + 3.15725 NA Intergenic CT-rich|Low_complexity|Low_complexity 17799 NM_000496 1415 Hs.373074 NM_000496 HPRD:00430 CRYBB2 CCA2|CRYB2|CRYB2A|CTRCT3|D22S665 crystallin, beta B2 protein-coding Atac153_MAPQ30_peak_1166 chr11 45248492 45248492 + 3.15725 NA exon (NM_001256695, exon 8 of 8) exon (NM_001256695, exon 8 of 8) 59392 NM_020826 57586 Hs.436643 NM_020826 HPRD:12128 SYT13 - synaptotagmin XIII protein-coding Atac153_MAPQ30_peak_2943 chr17 75292324 75292324 + 3.15725 NA intron (NM_001113492, intron 1 of 11) MLT1B|LTR|ERVL-MaLR 8351 NM_001113492 10801 Hs.440932 NM_006640 HPRD:10360 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Atac153_MAPQ30_peak_6281 chr8 11306584 11306584 + 3.15725 NA intron (NM_053279, intron 1 of 2) intron (NM_053279, intron 1 of 2) 17692 NM_053279 83648 Hs.124299 NM_053279 HPRD:12924 FAM167A C8orf13|D8S265 family with sequence similarity 167, member A protein-coding Atac153_MAPQ30_peak_2480 chr16 33922407 33922407 + 3.15725 NA Intergenic Intergenic 40096 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA Atac153_MAPQ30_peak_3187 chr19 2628265 2628265 + 3.15725 NA intron (NM_052847, intron 2 of 4) MLT1E1A|LTR|ERVL-MaLR 74481 NM_052847 2788 Hs.515544 NM_052847 HPRD:07638 GNG7 - guanine nucleotide binding protein (G protein), gamma 7 protein-coding Atac153_MAPQ30_peak_2305 chr15 89916326 89916326 + 3.15725 NA Intergenic Intergenic -4947 NR_015411 254559 Hs.136313 NR_015411 LINC00925 - long intergenic non-protein coding RNA 925 ncRNA Atac153_MAPQ30_peak_2253 chr15 75771851 75771851 + 3.15725 NA intron (NM_002833, intron 9 of 12) intron (NM_002833, intron 9 of 12) -23727 NM_001145357 25942 Hs.513039 NM_015477 HPRD:09690 SIN3A - SIN3 transcription regulator family member A protein-coding Atac153_MAPQ30_peak_967 chr10 126809443 126809443 + 3.15725 NA intron (NM_001083914, intron 1 of 10) intron (NM_001083914, intron 1 of 10) 37941 NM_001290215 1488 Hs.501345 NM_001329 HPRD:04016 CTBP2 - C-terminal binding protein 2 protein-coding Atac153_MAPQ30_peak_480 chr1 202198736 202198736 + 3.15725 NA intron (NM_001017403, intron 3 of 17) intron (NM_001017403, intron 3 of 17) 15453 NM_001017404 59352 Hs.497402 NM_021636 HPRD:05974 LGR6 GPCR|VTS20631 leucine-rich repeat containing G protein-coupled receptor 6 protein-coding Atac153_MAPQ30_peak_4373 chr22 27422206 27422206 + 3.15725 NA Intergenic Intergenic 122951 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000223704 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA Atac153_MAPQ30_peak_2902 chr17 64582702 64582702 + 3.15725 NA intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -169730 NR_110822 101928001 Hs.650730 NR_110822 ENSG00000264630 LOC101928001 - uncharacterized LOC101928001 ncRNA Atac153_MAPQ30_peak_3355 chr19 56225844 56225844 + 3.15725 NA intron (NM_176820, intron 6 of 8) intron (NM_176820, intron 6 of 8) 23924 NM_176820 338321 Hs.661568 NM_176820 HPRD:14808 NLRP9 CLR19.1|NALP9|NOD6|PAN12 NLR family, pyrin domain containing 9 protein-coding Atac153_MAPQ30_peak_4921 chr3 182903397 182903397 + 3.15725 NA intron (NM_015078, intron 27 of 29) intron (NM_015078, intron 27 of 29) -22730 NM_014398 27074 Hs.518448 NM_014398 HPRD:12062 LAMP3 CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403 lysosomal-associated membrane protein 3 protein-coding Atac153_MAPQ30_peak_3818 chr2 192087810 192087810 + 3.15725 NA Intergenic Intergenic -22297 NM_001130158 4430 Hs.439620 NM_012223 HPRD:08407 MYO1B myr1 myosin IB protein-coding Atac153_MAPQ30_peak_134 chr1 22154306 22154306 + 3.15725 NA intron (NM_001291860, intron 91 of 96) intron (NM_001291860, intron 91 of 96) 15548 NM_001013693 401944 Hs.745158 NM_001013693 HPRD:18436 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding Atac153_MAPQ30_peak_5340 chr5 76418160 76418160 + 3.15725 NA intron (NR_024398, intron 3 of 3) ERV3-16A3_I-int|LTR|ERVL -35130 NM_032367 84327 Hs.584988 NM_032367 ZBED3 - zinc finger, BED-type containing 3 protein-coding Atac153_MAPQ30_peak_6549 chr8 143290418 143290418 + 3.15725 NA TTS (NR_024378) TTS (NR_024378) 10701 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA Atac153_MAPQ30_peak_2332 chr15 99148690 99148690 + 3.15725 NA Intergenic Intergenic -43078 NM_000875 3480 Hs.643120 NM_000875 HPRD:00932 IGF1R CD221|IGFIR|IGFR|JTK13 insulin-like growth factor 1 receptor protein-coding Atac153_MAPQ30_peak_4724 chr3 58170587 58170587 + 3.15725 NA Intergenic MLT1J2|LTR|ERVL-MaLR 26143 NM_004944 1776 Hs.476453 NM_004944 HPRD:03764 DNASE1L3 DHP2|DNAS1L3|LSD|SLEB16 deoxyribonuclease I-like 3 protein-coding Atac153_MAPQ30_peak_3331 chr19 48223577 48223577 + 3.15725 NA intron (NM_014601, intron 3 of 5) AluSx1|SINE|Alu 6976 NM_014601 30846 Hs.744963 NM_014601 HPRD:10434 EHD2 PAST2 EH-domain containing 2 protein-coding Atac153_MAPQ30_peak_4370 chr22 26854336 26854336 + 3.15725 NA intron (NR_073135, intron 12 of 13) intron (NR_073135, intron 12 of 13) 21311 NR_073136 89781 Hs.474436 NM_022081 HPRD:05983 HPS4 LE Hermansky-Pudlak syndrome 4 protein-coding Atac153_MAPQ30_peak_6958 chrX 27858155 27858155 + 3.15725 NA Intergenic Intergenic 32048 NM_182506 139422 Hs.447363 NM_182506 HPRD:06554 MAGEB10 - melanoma antigen family B, 10 protein-coding Atac153_MAPQ30_peak_5613 chr6 21502861 21502861 + 3.15725 NA intron (NR_103790, intron 1 of 3) MLT1I|LTR|ERVL-MaLR 9262 NR_103790 100874531 Hs.112750 NR_103790 LINC00581 - long intergenic non-protein coding RNA 581 ncRNA Atac153_MAPQ30_peak_5777 chr6 126377868 126377868 + 3.15725 NA Intergenic Intergenic 65894 NR_049880 100847016 NR_049880 miRBase:MI0019302 MIR5695 - microRNA 5695 ncRNA Atac153_MAPQ30_peak_558 chr1 227830167 227830167 + 3.15725 NA intron (NM_178549, intron 2 of 3) intron (NM_178549, intron 2 of 3) 55241 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo Atac153_MAPQ30_peak_4611 chr3 32483252 32483252 + 3.15725 NA intron (NM_181472, intron 1 of 3) intron (NM_181472, intron 1 of 3) 50089 NM_181472 112616 Hs.440494 NM_138410 HPRD:06988 CMTM7 CKLFSF7 CKLF-like MARVEL transmembrane domain containing 7 protein-coding Atac153_MAPQ30_peak_4512 chr22 49109830 49109830 + 3.15725 NA intron (NM_015381, intron 3 of 3) intron (NM_015381, intron 3 of 3) -66277 NR_039761 100616415 NR_039761 miRBase:MI0016903 MIR4535 - microRNA 4535 ncRNA Atac153_MAPQ30_peak_272 chr1 55868947 55868947 + 3.15725 NA Intergenic Intergenic 177633 NR_039618 100616272 NR_039618 miRBase:MI0016759 MIR4422 - microRNA 4422 ncRNA Atac153_MAPQ30_peak_2520 chr16 57388981 57388981 + 3.15725 NA Intergenic L1MC5|LINE|L1 -3714 NM_002990 6367 Hs.534347 NM_002990 HPRD:04263 CCL22 ABCD-1|DC/B-CK|MDC|SCYA22|STCP-1 chemokine (C-C motif) ligand 22 protein-coding Atac153_MAPQ30_peak_1783 chr13 29315056 29315056 + 3.15725 NA Intergenic MER97a|DNA|hAT-Tip100 -21906 NM_181785 283537 Hs.117167 NM_181785 HPRD:14146 SLC46A3 FKSG16 solute carrier family 46, member 3 protein-coding Atac153_MAPQ30_peak_3965 chr2 242592570 242592570 + 3.15725 NA intron (NM_013325, intron 3 of 12) L1M5|LINE|L1 15543 NM_178326 23192 Hs.283610 NM_013325 HPRD:16499 ATG4B APG4B|AUTL1 autophagy related 4B, cysteine peptidase protein-coding Atac153_MAPQ30_peak_3465 chr2 27168851 27168851 + 3.15725 NA intron (NM_001253723, intron 12 of 12) intron (NM_001253723, intron 12 of 12) -24674 NM_012326 22924 Hs.515860 NM_012326 HPRD:16156 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule-associated protein, RP/EB family, member 3 protein-coding Atac153_MAPQ30_peak_2624 chr16 86690410 86690410 + 3.15725 NA Intergenic Charlie1a|DNA|hAT-Charlie 78295 NM_005250 2300 Hs.533830 NM_005250 HPRD:07219 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding Atac153_MAPQ30_peak_1648 chr12 112984393 112984393 + 3.15725 NA Intergenic AluJr|SINE|Alu 127857 NM_002834 5781 Hs.506852 NM_002834 HPRD:01470 PTPN11 BPTP3|CFC|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2 protein tyrosine phosphatase, non-receptor type 11 protein-coding Atac153_MAPQ30_peak_1812 chr13 50866335 50866335 + 3.15725 NA intron (NR_109974, intron 2 of 6) MIRb|SINE|MIR 120181 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 4 pseudo Atac153_MAPQ30_peak_5276 chr5 14708715 14708715 + 3.15725 NA 3' UTR (NM_054027, exon 12 of 12) 3' UTR (NM_054027, exon 12 of 12) -4088 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA Atac153_MAPQ30_peak_3530 chr2 47285643 47285643 + 3.15725 NA intron (NM_001288955, intron 17 of 18) intron (NM_001288955, intron 17 of 18) 96874 NM_173649 285051 Hs.531575 NM_173649 HPRD:08273 C2orf61 - chromosome 2 open reading frame 61 protein-coding Atac153_MAPQ30_peak_5109 chr4 78297047 78297047 + 3.15725 NA Intergenic Intergenic -135860 NM_006419 10563 Hs.100431 NM_006419 HPRD:05513 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 chemokine (C-X-C motif) ligand 13 protein-coding Atac153_MAPQ30_peak_1635 chr12 110282717 110282717 + 3.15725 NA Intergenic Intergenic -11505 NM_021625 59341 Hs.506713 NM_021625 HPRD:05667 TRPV4 CMT2C|HMSN2C|OTRPC4|SMAL|SPSMA|SSQTL1|TRP12|VRL2|VROAC transient receptor potential cation channel, subfamily V, member 4 protein-coding Atac153_MAPQ30_peak_2504 chr16 50654673 50654673 + 3.15725 NA intron (NM_033119, intron 4 of 9) intron (NM_033119, intron 4 of 9) -48093 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA Atac153_MAPQ30_peak_5063 chr4 38912512 38912512 + 3.15725 NA intron (NM_138389, intron 7 of 14) L2a|LINE|L2 42859 NR_030300 693159 NR_030300 miRBase:MI0003581 MIR574 MIR574-3p|MIRN574|hsa-mir-574 microRNA 574 ncRNA Atac153_MAPQ30_peak_943 chr10 123406959 123406959 + 3.15725 NA Intergenic Intergenic -48987 NR_073009 2263 Hs.533683 NM_000141 HPRD:01492 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding Atac153_MAPQ30_peak_2906 chr17 64977497 64977497 + 3.15725 NA intron (NM_014405, intron 1 of 3) L3b|LINE|CR1 16517 NM_014405 27092 Hs.514423 NM_014405 HPRD:05911 CACNG4 - calcium channel, voltage-dependent, gamma subunit 4 protein-coding Atac153_MAPQ30_peak_1160 chr11 44301288 44301288 + 3.15725 NA intron (NM_021926, intron 1 of 3) L2b|LINE|L2 30428 NM_021926 60529 Hs.436055 NM_021926 HPRD:05661 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding Atac153_MAPQ30_peak_2503 chr16 50317549 50317549 + 3.15725 NA intron (NM_001286057, intron 1 of 18) MIR|SINE|MIR -4274 NM_001114 113 Hs.513578 NM_001114 HPRD:02663 ADCY7 AC7 adenylate cyclase 7 protein-coding Atac153_MAPQ30_peak_833 chr10 81931676 81931676 + 3.15725 NA intron (NM_001278409, intron 3 of 16) MIR3|SINE|MIR 32571 NM_001278408 311 Hs.530291 NM_001157 HPRD:03983 ANXA11 ANX11|CAP50 annexin A11 protein-coding Atac153_MAPQ30_peak_1799 chr13 39469073 39469073 + 3.15725 NA Intergenic Intergenic 95923 NM_001144033 161003 Hs.327794 NM_145286 HPRD:16315 STOML3 Epb7.2l|SRO stomatin (EPB72)-like 3 protein-coding Atac153_MAPQ30_peak_6052 chr7 70093989 70093989 + 3.15725 NA intron (NM_001127231, intron 5 of 17) intron (NM_001127231, intron 5 of 17) -503534 NM_022479 64409 Hs.488591 NM_022479 HPRD:15655 WBSCR17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T5L Williams-Beuren syndrome chromosome region 17 protein-coding Atac153_MAPQ30_peak_2100 chr15 25331866 25331866 + 3.15725 NA promoter-TSS (NR_003334) promoter-TSS (NR_003334) 193 NR_003332 100033429 NR_003332 ENSG00000206656 SNORD116-17 HBII-85-17 small nucleolar RNA, C/D box 116-17 snoRNA Atac153_MAPQ30_peak_2760 chr17 21244662 21244662 + 3.15725 NA Intergenic Intergenic -35037 NM_021012 3768 Hs.200629 NM_021012 HPRD:09083 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium inwardly-rectifying channel, subfamily J, member 12 protein-coding Atac153_MAPQ30_peak_2393 chr16 11249619 11249619 + 3.15725 NA intron (NM_015226, intron 21 of 22) intron (NM_015226, intron 21 of 22) 100420 NM_003745 8651 Hs.50640 NM_003745 HPRD:04669 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP3 suppressor of cytokine signaling 1 protein-coding Atac153_MAPQ30_peak_3582 chr2 75105060 75105060 + 3.15725 NA intron (NM_000189, intron 8 of 17) intron (NM_000189, intron 8 of 17) -31198 NR_125792 102724515 Hs.708649 NR_125792 LINC01291 - long intergenic non-protein coding RNA 1291 ncRNA Atac153_MAPQ30_peak_780 chr10 71330264 71330264 + 3.15725 NA Intergenic Intergenic 2946 NM_020999 50674 Hs.532682 NM_020999 NEUROG3 Atoh5|Math4B|NGN-3|bHLHa7|ngn3 neurogenin 3 protein-coding Atac153_MAPQ30_peak_687 chr10 20966158 20966158 + 3.15725 NA Intergenic MER57B1|LTR|ERV1 125259 NR_039822 100616383 NR_039822 miRBase:MI0017306 MIR4675 - microRNA 4675 ncRNA Atac153_MAPQ30_peak_2012 chr14 88272047 88272047 + 3.15725 NA Intergenic MER90a|LTR|ERV1 187568 NM_001201401 2581 Hs.513439 NM_000153 HPRD:06057 GALC - galactosylceramidase protein-coding Atac153_MAPQ30_peak_6270 chr8 9122860 9122860 + 3.15725 NA Intergenic Intergenic -59701 NR_040039 157273 Hs.650222 NR_040039 ENSG00000254235 LOC157273 - uncharacterized LOC157273 ncRNA Atac153_MAPQ30_peak_3031 chr18 21188157 21188157 + 3.15725 NA intron (NM_173505, intron 9 of 9) L2c|LINE|L2 -21576 NM_000271 4864 Hs.464779 NM_000271 HPRD:09622 NPC1 NPC Niemann-Pick disease, type C1 protein-coding Atac153_MAPQ30_peak_958 chr10 125970327 125970327 + 3.15725 NA Intergenic Intergenic -117204 NM_001270765 51363 Hs.287537 NM_014863 HPRD:12203 CHST15 BRAG|GALNAC4S-6ST carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 protein-coding Atac153_MAPQ30_peak_6986 chrX 38786148 38786148 + 3.15725 NA Intergenic Intergenic -123012 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4540 chr3 7435000 7435000 + 3.15725 NA intron (NM_181874, intron 4 of 10) L1M2a1|LINE|L1 141971 NR_046606 100873937 Hs.570608 NR_046606 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6380 chr8 54167891 54167891 + 3.15725 NA Intergenic L2c|LINE|L2 -3634 NM_001282904 4986 Hs.106795 NM_000912 HPRD:01309 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor, kappa 1 protein-coding Atac153_MAPQ30_peak_3131 chr18 61662790 61662790 + 3.15725 NA Intergenic MER76-int|LTR|ERVL 25527 NM_198833 5271 Hs.368077 NM_002640 HPRD:03412 SERPINB8 CAP2|PI8 serpin peptidase inhibitor, clade B (ovalbumin), member 8 protein-coding Atac153_MAPQ30_peak_4963 chr4 2292039 2292039 + 3.15725 NA intron (NM_001172656, intron 7 of 11) intron (NM_001172656, intron 7 of 11) -28300 NM_006454 10608 Hs.655020 NM_006454 HPRD:10103 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding Atac153_MAPQ30_peak_6812 chr9 130280146 130280146 + 3.15725 NA exon (NM_022833, exon 6 of 14) exon (NM_022833, exon 6 of 14) 51250 NM_022833 64855 Hs.522401 NM_022833 HPRD:10804 FAM129B C9orf88|MEG-3|MINERVA|OC58|bA356B19.6 family with sequence similarity 129, member B protein-coding Atac153_MAPQ30_peak_1825 chr13 60027599 60027599 + 3.15725 NA Intergenic Intergenic -559253 NR_046539 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4349 chr22 23199868 23199868 + 3.15725 NA Intergenic Intergenic -30092 NM_001256296 100423062 Hs.449585 NM_001178126 ENSG00000254709 IGLL5 - immunoglobulin lambda-like polypeptide 5 protein-coding Atac153_MAPQ30_peak_5980 chr7 44270278 44270278 + 3.15725 NA intron (NM_001220, intron 17 of 23) intron (NM_001220, intron 17 of 23) 29700 NM_006555 10652 Hs.520794 NM_006555 HPRD:16205 YKT6 - YKT6 v-SNARE homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_6067 chr7 77282991 77282991 + 3.15725 NA Intergenic Intergenic -42752 NM_198467 222194 Hs.72451 NM_198467 RSBN1L - round spermatid basic protein 1-like protein-coding Atac153_MAPQ30_peak_5584 chr6 7746394 7746394 + 3.15725 NA intron (NM_001718, intron 1 of 6) intron (NM_001718, intron 1 of 6) 19383 NM_001718 654 Hs.285671 NM_001718 HPRD:00211 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding Atac153_MAPQ30_peak_864 chr10 97240497 97240497 + 3.15725 NA intron (NM_001290294, intron 2 of 31) L2b|LINE|L2 -39560 NM_001290296 10580 Hs.38621 NM_006434 HPRD:05587 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding Atac153_MAPQ30_peak_5029 chr4 11263003 11263003 + 3.15725 NA Intergenic Intergenic -107448 NR_030298 693157 NR_030298 miRBase:MI0003579 MIR572 MIRN572|hsa-mir-572 microRNA 572 ncRNA Atac153_MAPQ30_peak_132 chr1 21962854 21962854 + 3.15725 NA intron (NM_002885, intron 2 of 24) MIRb|SINE|MIR 15494 NM_001145658 5909 Hs.148178 NM_002885 HPRD:02609 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding Atac153_MAPQ30_peak_7236 chrX 137222309 137222309 + 3.15725 NA Intergenic ERVL-E-int|LTR|ERVL 477490 NR_026935 158696 Hs.558664 NR_026935 LINC00889 - long intergenic non-protein coding RNA 889 ncRNA Atac153_MAPQ30_peak_5410 chr5 133874083 133874083 + 3.15725 NA intron (NM_001289984, intron 3 of 10) L2a|LINE|L2 12285 NM_015288 23338 Hs.732155 NM_015288 HPRD:15124 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding Atac153_MAPQ30_peak_2713 chr17 12896011 12896011 + 3.15725 NA 3' UTR (NM_018127, exon 24 of 24) 3' UTR (NM_018127, exon 24 of 24) 25370 NM_018127 60528 Hs.434232 NM_018127 HPRD:05641 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding Atac153_MAPQ30_peak_5086 chr4 55064697 55064697 + 3.15725 NA Intergenic Intergenic -30567 NM_006206 5156 Hs.74615 NM_006206 HPRD:01429 PDGFRA CD140A|PDGFR-2|PDGFR2|RHEPDGFRA platelet-derived growth factor receptor, alpha polypeptide protein-coding Atac153_MAPQ30_peak_3702 chr2 122499561 122499561 + 3.15725 NA Intergenic Intergenic -5058 NM_032390 84365 Hs.367842 NM_032390 HPRD:17576 NIFK MKI67IP|Nopp34 nucleolar protein interacting with the FHA domain of MKI67 protein-coding Atac153_MAPQ30_peak_5810 chr6 150730557 150730557 + 3.15725 NA Intergenic Intergenic 40529 NM_001164695 389434 Hs.310225 NM_203395 HPRD:16668 IYD C6orf71|DEHAL1|TDH4|dJ422F24.1 iodotyrosine deiodinase protein-coding Atac153_MAPQ30_peak_1518 chr12 52439197 52439197 + 3.15725 NA intron (NM_001202234, intron 2 of 7) intron (NM_001202234, intron 2 of 7) -5989 NM_173157 3164 Hs.524430 NM_002135 HPRD:00744 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4, group A, member 1 protein-coding Atac153_MAPQ30_peak_4029 chr20 22755449 22755449 + 3.15725 NA Intergenic L2|LINE|L2 -167294 NR_109883 101929685 Hs.563018 NR_109883 LINC01384 - long intergenic non-protein coding RNA 1384 ncRNA Atac153_MAPQ30_peak_797 chr10 73400945 73400945 + 3.15725 NA intron (NM_001171930, intron 11 of 30) MER5B|DNA|hAT-Charlie 78633 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding Atac153_MAPQ30_peak_5077 chr4 53771587 53771587 + 3.15725 NA intron (NM_152540, intron 7 of 8) intron (NM_152540, intron 7 of 8) 43092 NM_023940 65997 Hs.8035 NM_023940 HPRD:15216 RASL11B - RAS-like, family 11, member B protein-coding Atac153_MAPQ30_peak_1398 chr11 131565596 131565596 + 3.15725 NA intron (NM_001048209, intron 1 of 7) intron (NM_001048209, intron 1 of 7) -154835 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA Atac153_MAPQ30_peak_6614 chr9 35046136 35046136 + 3.15725 NA TTS (NM_203299) TTS (NM_203299) 3667 NM_001287391 138724 Hs.148250 NM_203299 HPRD:14616 C9orf131 - chromosome 9 open reading frame 131 protein-coding Atac153_MAPQ30_peak_1808 chr13 47166126 47166126 + 3.15725 NA intron (NM_001164211, intron 1 of 19) intron (NM_001164211, intron 1 of 19) 38830 NM_015116 23143 Hs.507971 NM_015116 HPRD:14307 LRCH1 CHDC1|NP81 leucine-rich repeats and calponin homology (CH) domain containing 1 protein-coding Atac153_MAPQ30_peak_6230 chr7 158076872 158076872 + 3.15725 NA intron (NM_130842, intron 2 of 21) intron (NM_130842, intron 2 of 21) 248633 NR_030325 693180 NR_030325 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA Atac153_MAPQ30_peak_3441 chr2 19984309 19984309 + 3.15725 NA Intergenic Intergenic -84306 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA Atac153_MAPQ30_peak_4711 chr3 53812130 53812130 + 3.15725 NA intron (NM_000720, intron 38 of 48) intron (NM_000720, intron 38 of 48) 68290 NM_018397 55349 Hs.126688 NM_018397 CHDH - choline dehydrogenase protein-coding Atac153_MAPQ30_peak_5302 chr5 40751425 40751425 + 3.15725 NA intron (NM_012382, intron 1 of 4) Tigger1|DNA|TcMar-Tigger 4647 NM_012382 23548 Hs.348915 NM_012382 HPRD:17807 TTC33 OSRF tetratricopeptide repeat domain 33 protein-coding Atac153_MAPQ30_peak_490 chr1 203678655 203678655 + 3.15725 NA exon (NM_001001396, exon 11 of 22) exon (NM_001001396, exon 11 of 22) -20054 NR_003019 677843 Hs.676135 NR_003019 SNORA77 ACA63 small nucleolar RNA, H/ACA box 77 snoRNA Atac153_MAPQ30_peak_6985 chrX 38705470 38705470 + 3.15725 NA Intergenic Intergenic -42334 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_7015 chrX 47446183 47446183 + 3.15725 NA promoter-TSS (NR_039926) promoter-TSS (NR_039926) -645 NR_039926 100616147 NR_039926 miRBase:MI0017410 MIR4769 - microRNA 4769 ncRNA Atac153_MAPQ30_peak_6972 chrX 34568076 34568076 + 3.15725 NA Intergenic MER41-int|LTR|ERV1 107329 NM_031442 83604 Hs.8769 NM_031442 HPRD:06741 TMEM47 BCMP1|TM4SF10 transmembrane protein 47 protein-coding Atac153_MAPQ30_peak_3618 chr2 91816992 91816992 + 3.15725 NA Intergenic Intergenic 30983 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_1207 chr11 62763940 62763940 + 3.15725 NA intron (NM_004254, intron 5 of 10) intron (NM_004254, intron 5 of 10) -11445 NM_004790 9356 Hs.369252 NM_004790 HPRD:12125 SLC22A6 HOAT1|OAT1|PAHT|ROAT1 solute carrier family 22 (organic anion transporter), member 6 protein-coding Atac153_MAPQ30_peak_6771 chr9 117231815 117231815 + 3.15725 NA intron (NM_001083885, intron 2 of 11) LTR16A|LTR|ERVL 33680 NM_001083885 25861 Hs.93836 NM_015404 HPRD:09718 DFNB31 CIP98|PDZD7B|USH2D|WHRN|WI deafness, autosomal recessive 31 protein-coding Atac153_MAPQ30_peak_2139 chr15 41226997 41226997 + 3.15725 NA intron (NM_019074, intron 7 of 10) intron (NM_019074, intron 7 of 10) 5466 NM_019074 54567 Hs.511076 NM_019074 HPRD:05540 DLL4 hdelta2 delta-like 4 (Drosophila) protein-coding Atac153_MAPQ30_peak_4195 chr20 58939875 58939875 + 3.15725 NA Intergenic L2b|LINE|L2 108159 NR_109903 101928048 Hs.572803 NR_109903 LOC101928048 - uncharacterized LOC101928048 ncRNA Atac153_MAPQ30_peak_7221 chrX 133781113 133781113 + 3.15725 NA intron (NM_021796, intron 1 of 2) intron (NM_021796, intron 1 of 2) 11400 NM_021796 10761 Hs.496811 NM_021796 HPRD:02245 PLAC1 CT92|OOSP2L placenta-specific 1 protein-coding Atac153_MAPQ30_peak_5993 chr7 47535606 47535606 + 3.15725 NA intron (NM_022748, intron 3 of 30) intron (NM_022748, intron 3 of 30) 86136 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding Atac153_MAPQ30_peak_3245 chr19 17390545 17390545 + 3.15725 NA TTS (NM_001288757) TTS (NM_001288757) -1909 NM_001278444 126549 Hs.721610 NM_152363 HPRD:08801 ANKLE1 ANKRD41|LEM3|LEMD6 ankyrin repeat and LEM domain containing 1 protein-coding Atac153_MAPQ30_peak_2646 chr17 567674 567674 + 3.15725 NA intron (NM_001128159, intron 4 of 21) L2a|LINE|L2 50422 NM_001128159 55275 Hs.461819 NM_018289 HPRD:07720 VPS53 HCCS1|PCH2E|hVps53L|pp13624 vacuolar protein sorting 53 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_4053 chr20 25488074 25488074 + 3.15725 NA intron (NM_025176, intron 5 of 23) intron (NM_025176, intron 5 of 23) 78079 NM_025176 22981 Hs.631508 NM_025176 HPRD:11120 NINL NLP|dJ691N24.1 ninein-like protein-coding Atac153_MAPQ30_peak_1698 chr12 125108826 125108826 + 3.15725 NA Intergenic Intergenic -56816 NM_001206654 9612 Hs.137510 NM_006312 HPRD:02910 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding Atac153_MAPQ30_peak_2458 chr16 27090325 27090325 + 3.15725 NA Intergenic Intergenic 12106 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding Atac153_MAPQ30_peak_277 chr1 58259206 58259206 + 3.15725 NA intron (NM_021080, intron 2 of 16) intron (NM_021080, intron 2 of 16) -67009 NR_104363 101926890 Hs.662207 NR_104362 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4317 chr21 45754598 45754598 + 3.15725 NA intron (NM_001271440, intron 3 of 6) MIR|SINE|MIR 3623 NM_001271442 755 Hs.517331 NM_004928 ENSG00000160226 C21orf2 LRRC76|YF5/A2 chromosome 21 open reading frame 2 protein-coding Atac153_MAPQ30_peak_4904 chr3 167767241 167767241 + 3.15725 NA intron (NM_014498, intron 1 of 15) LTR78|LTR|ERV1 46176 NM_014498 27333 Hs.143600 NM_014498 HPRD:08429 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding Atac153_MAPQ30_peak_7297 chrY 9988291 9988291 + 3.15725 NA Intergenic Intergenic 239884 NR_001540 252955 Hs.522846 NR_001540 ENSG00000239225 TTTY23 NCRNA00148|TTTY23B testis-specific transcript, Y-linked 23 (non-protein coding) ncRNA Atac153_MAPQ30_peak_6688 chr9 92866288 92866288 + 3.15725 NA Intergenic MLT1D|LTR|ERVL-MaLR -62507 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 LOC286370 - uncharacterized LOC286370 ncRNA Atac153_MAPQ30_peak_1379 chr11 126802846 126802846 + 3.15725 NA intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -7796 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_3379 chr2 2542433 2542433 + 3.15725 NA Intergenic Tigger9b|DNA|TcMar-Tigger -207388 NM_015025 23040 Hs.434418 NM_015025 HPRD:14797 MYT1L NZF1|ZC2HC4B myelin transcription factor 1-like protein-coding Atac153_MAPQ30_peak_4837 chr3 129323619 129323619 + 3.15725 NA intron (NM_015103, intron 1 of 35) intron (NM_015103, intron 1 of 35) 1963 NM_015103 23129 Hs.301685 NM_015103 HPRD:05046 PLXND1 PLEXD1 plexin D1 protein-coding Atac153_MAPQ30_peak_245 chr1 46671184 46671184 + 3.15725 NA intron (NM_001013615, intron 1 of 1) intron (NM_001013615, intron 1 of 1) 2178 NM_001013615 541468 Hs.568642 NM_001013615 HPRD:18478 LURAP1 C1orf190|LRAP35a|LRP35A leucine rich adaptor protein 1 protein-coding Atac153_MAPQ30_peak_1337 chr11 116728655 116728655 + 3.15725 NA exon (NM_001281749, exon 20 of 24) exon (NM_001281749, exon 20 of 24) -20317 NM_000039 335 Hs.93194 NM_000039 HPRD:02517 APOA1 - apolipoprotein A-I protein-coding Atac153_MAPQ30_peak_4122 chr20 43951796 43951796 + 3.15725 NA Intergenic MLT1F|LTR|ERVL-MaLR -14627 NM_003833 8785 Hs.278489 NM_003833 HPRD:04873 MATN4 - matrilin 4 protein-coding Atac153_MAPQ30_peak_1609 chr12 105456212 105456212 + 3.15725 NA intron (NM_001034173, intron 7 of 22) intron (NM_001034173, intron 7 of 22) 22129 NR_027752 160428 Hs.42572 NM_001034173 HPRD:18742 ALDH1L2 mtFDH aldehyde dehydrogenase 1 family, member L2 protein-coding Atac153_MAPQ30_peak_812 chr10 79278595 79278595 + 3.15725 NA intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 118982 NM_001271520 3778 Hs.144795 NM_002247 HPRD:15967 KCNMA1 BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|mSLO1 potassium large conductance calcium-activated channel, subfamily M, alpha member 1 protein-coding Atac153_MAPQ30_peak_854 chr10 89366396 89366396 + 3.15725 NA Intergenic Intergenic -53080 NM_004670 9060 Hs.524491 NM_004670 HPRD:04303 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding Atac153_MAPQ30_peak_1082 chr11 10685450 10685450 + 3.15725 NA intron (NM_001206880, intron 1 of 19) MIRb|SINE|MIR -11602 NM_001098579 10335 Hs.501898 NM_130385 HPRD:05242 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding Atac153_MAPQ30_peak_2903 chr17 64672399 64672399 + 3.15725 NA intron (NM_002737, intron 5 of 16) intron (NM_002737, intron 5 of 16) -110791 NR_030364 693219 NR_030364 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA Atac153_MAPQ30_peak_2590 chr16 81830960 81830960 + 3.15725 NA intron (NM_002661, intron 2 of 32) intron (NM_002661, intron 2 of 32) 18097 NM_002661 5336 Hs.372303 NM_002661 HPRD:02570 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C, gamma 2 (phosphatidylinositol-specific) protein-coding Atac153_MAPQ30_peak_4189 chr20 58025597 58025597 + 3.15725 NA Intergenic Intergenic -126967 NM_001199505 116154 Hs.473218 NM_080672 HPRD:10571 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding Atac153_MAPQ30_peak_6712 chr9 97874365 97874365 + 3.15725 NA intron (NM_000136, intron 12 of 14) intron (NM_000136, intron 12 of 14) -25989 NR_036109 100422842 NR_036109 miRBase:MI0014181 MIR3074 - microRNA 3074 ncRNA Atac153_MAPQ30_peak_4536 chr3 5269780 5269780 + 3.15725 NA Intergenic Intergenic 22160 NR_039953 100616334 NR_039953 miRBase:MI0017437 MIR4790 - microRNA 4790 ncRNA Atac153_MAPQ30_peak_5780 chr6 129826084 129826084 + 3.15725 NA intron (NM_001079823, intron 59 of 63) intron (NM_001079823, intron 59 of 63) 205286 NM_033515 93663 Hs.486458 NM_033515 HPRD:12474 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding Atac153_MAPQ30_peak_1198 chr11 60482635 60482635 + 3.15725 NA intron (NM_031457, intron 6 of 6) intron (NM_031457, intron 6 of 6) 15588 NM_031457 83661 Hs.150878 NM_031457 HPRD:08409 MS4A8 4SPAN4|CD20L5|MS4A4|MS4A8B membrane-spanning 4-domains, subfamily A, member 8 protein-coding Atac153_MAPQ30_peak_1845 chr13 95952715 95952715 + 3.15725 NA intron (NM_001105515, intron 1 of 20) intron (NM_001105515, intron 1 of 20) 972 NM_001105515 10257 Hs.508423 NM_005845 HPRD:05583 ABCC4 EST170205|MOAT-B|MOATB|MRP4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein-coding Atac153_MAPQ30_peak_2850 chr17 46781627 46781627 + 3.15725 NA Intergenic Intergenic 18255 NM_032391 84366 Hs.116467 NM_032391 HPRD:17897 PRAC1 C17orf92|PRAC prostate cancer susceptibility candidate 1 protein-coding Atac153_MAPQ30_peak_5733 chr6 90339478 90339478 + 3.15725 NA intron (NM_001242811, intron 15 of 15) intron (NM_001242811, intron 15 of 15) 8738 NR_028493 57226 Hs.177275 NM_020466 HPRD:13146 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding Atac153_MAPQ30_peak_4020 chr20 19647611 19647611 + 3.15725 NA intron (NM_020689, intron 8 of 16) intron (NM_020689, intron 8 of 16) -219554 NM_001242581 54453 Hs.472270 NM_018993 HPRD:15249 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding Atac153_MAPQ30_peak_4825 chr3 127355441 127355441 + 3.15725 NA intron (NM_015720, intron 1 of 7) intron (NM_015720, intron 1 of 7) 7439 NM_015720 50512 Hs.591290 NM_015720 HPRD:15154 PODXL2 EG|PODLX2 podocalyxin-like 2 protein-coding Atac153_MAPQ30_peak_5286 chr5 31666784 31666784 + 3.15725 NA Intergenic Intergenic -132247 NM_178140 23037 Hs.481819 NM_015022 HPRD:10142 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding Atac153_MAPQ30_peak_6103 chr7 106018121 106018121 + 3.15725 NA Intergenic Intergenic -92483 NM_005746 10135 Hs.489615 NM_005746 HPRD:09938 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding Atac153_MAPQ30_peak_25 chr1 4529986 4529986 + 3.15725 NA Intergenic Intergenic 57875 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LOC284661 - uncharacterized LOC284661 ncRNA Atac153_MAPQ30_peak_3045 chr18 33776604 33776604 + 3.15725 NA intron (NM_017947, intron 2 of 14) intron (NM_017947, intron 2 of 14) 9124 NM_017947 55034 Hs.405028 NM_017947 MOCOS HMCS|MCS|MOS molybdenum cofactor sulfurase protein-coding Atac153_MAPQ30_peak_2681 chr17 6343655 6343655 + 3.15725 NA Intergenic Intergenic -4080 NM_001195228 54478 Hs.592116 NM_019013 HPRD:07649 FAM64A CATS|RCS1 family with sequence similarity 64, member A protein-coding Atac153_MAPQ30_peak_1552 chr12 63069796 63069796 + 3.15725 NA intron (NM_020700, intron 8 of 9) intron (NM_020700, intron 8 of 9) 72330 NR_029661 406891 NR_029661 miRBase:MI0000434 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i microRNA let-7i ncRNA Atac153_MAPQ30_peak_5932 chr7 25935282 25935282 + 3.15725 NA Intergenic Intergenic 54324 NR_029597 406940 NR_029597 miRBase:MI0000253 MIR148A MIRN148|MIRN148A|hsa-mir-148 microRNA 148a ncRNA Atac153_MAPQ30_peak_2223 chr15 70361670 70361670 + 3.15725 NA intron (NM_001282979, intron 6 of 19) intron (NM_001282979, intron 6 of 19) 10137 NR_030714 693214 NR_030714 MIR629 MIRN629|hsa-mir-629 microRNA 629 ncRNA Atac153_MAPQ30_peak_4620 chr3 36789868 36789868 + 3.15725 NA Intergenic Intergenic -8516 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin-like kinase 3 protein-coding Atac153_MAPQ30_peak_190 chr1 35125323 35125323 + 3.15725 NA Intergenic Intergenic -95325 NM_005268 2709 Hs.198249 NM_005268 HPRD:06840 GJB5 CX31.1 gap junction protein, beta 5, 31.1kDa protein-coding Atac153_MAPQ30_peak_3513 chr2 42748372 42748372 + 3.15725 NA intron (NM_001282755, intron 2 of 17) MLT1F2|LTR|ERVL-MaLR 26663 NM_001282755 57504 Hs.435413 NM_020744 HPRD:12359 MTA3 - metastasis associated 1 family, member 3 protein-coding Atac153_MAPQ30_peak_4562 chr3 11136901 11136901 + 3.15725 NA Intergenic LTR12C|LTR|ERV1 -41878 NM_001098213 3269 Hs.1570 NM_000861 HPRD:02544 HRH1 H1-R|hisH1 histamine receptor H1 protein-coding Atac153_MAPQ30_peak_2384 chr16 9413828 9413828 + 3.15725 NA Intergenic L3|LINE|CR1 85054 NR_036166 100422920 NR_036166 miRBase:MI0014244 MIR548X - microRNA 548x ncRNA Atac153_MAPQ30_peak_1193 chr11 57664267 57664267 + 3.15725 NA Intergenic MLT1F1|LTR|ERVL-MaLR -127086 NM_001005212 219956 Hs.689841 NM_001005212 HPRD:17800 OR9Q1 - olfactory receptor, family 9, subfamily Q, member 1 protein-coding Atac153_MAPQ30_peak_2654 chr17 1930679 1930679 + 3.15725 NA Intergenic L2c|LINE|L2 -2501 NM_178568 146760 Hs.22917 NM_178568 HPRD:11523 RTN4RL1 NGRH2|NgR3 reticulon 4 receptor-like 1 protein-coding Atac153_MAPQ30_peak_5404 chr5 133223115 133223115 + 3.15725 NA Intergenic Intergenic 81291 NM_020199 56951 Hs.744034 NM_020199 HPRD:12829 C5orf15 KCT2 chromosome 5 open reading frame 15 protein-coding Atac153_MAPQ30_peak_2271 chr15 78909139 78909139 + 3.15725 NA intron (NM_000743, intron 4 of 5) intron (NM_000743, intron 4 of 5) 4498 NM_001166694 1136 Hs.89605 NM_000743 HPRD:07511 CHRNA3 LNCR2|NACHRA3|PAOD2 cholinergic receptor, nicotinic, alpha 3 (neuronal) protein-coding Atac153_MAPQ30_peak_6306 chr8 21219870 21219870 + 3.15725 NA Intergenic Intergenic 64120 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA Atac153_MAPQ30_peak_4182 chr20 56389911 56389911 + 3.15725 NA Intergenic Intergenic -80539 NR_039757 100616353 NR_039757 miRBase:MI0016899 MIR4532 - microRNA 4532 ncRNA Atac153_MAPQ30_peak_637 chr10 2286782 2286782 + 3.15725 NA Intergenic Intergenic 70486 NR_038884 399708 Hs.521270 NR_038884 LINC00701 - long intergenic non-protein coding RNA 701 ncRNA Atac153_MAPQ30_peak_7125 chrX 93120711 93120711 + 3.15725 NA Intergenic Intergenic 191699 NM_001171111 286499 Hs.110069 NM_173698 HPRD:06562 FAM133A CT115 family with sequence similarity 133, member A protein-coding Atac153_MAPQ30_peak_5092 chr4 58082700 58082700 + 3.15725 NA Intergenic Intergenic -106149 NM_001253835 3490 Hs.479808 NM_001553 HPRD:04183 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin-like growth factor binding protein 7 protein-coding Atac153_MAPQ30_peak_4110 chr20 41844631 41844631 + 3.15725 NA Intergenic L2c|LINE|L2 -26074 NM_133170 11122 Hs.526879 NM_007050 HPRD:06690 PTPRT RPTPrho protein tyrosine phosphatase, receptor type, T protein-coding Atac153_MAPQ30_peak_5666 chr6 39409789 39409789 + 3.15725 NA intron (NM_001289021, intron 12 of 21) intron (NM_001289021, intron 12 of 21) -10639 NM_001289024 221458 Hs.588202 NM_145027 HPRD:10786 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding Atac153_MAPQ30_peak_3141 chr18 71507854 71507854 + 3.15725 NA Intergenic Intergenic 307145 NM_152676 201456 Hs.664011 NM_152676 HPRD:16435 FBXO15 FBX15 F-box protein 15 protein-coding Atac153_MAPQ30_peak_4253 chr21 35321717 35321717 + 3.15725 NA intron (NM_001288961, intron 1 of 1) intron (NM_001288961, intron 1 of 1) 487 NM_001288961 400863 Hs.729814 NM_207472 LOC400863 - uncharactered LOC400863 protein-coding Atac153_MAPQ30_peak_5035 chr4 15522258 15522258 + 3.15725 NA intron (NM_001080522, intron 12 of 37) intron (NM_001080522, intron 12 of 37) 50769 NM_001164720 57545 Hs.590928 NM_020785 ENSG00000048342 CC2D2A JBTS9|MKS6 coiled-coil and C2 domain containing 2A protein-coding Atac153_MAPQ30_peak_5568 chr6 4946336 4946336 + 3.15725 NA intron (NR_026590, intron 7 of 8) ERV3-16A3_I-int|LTR|ERVL 56110 NM_001143971 9425 Hs.269092 NM_004824 HPRD:04803 CDYL CDYL1 chromodomain protein, Y-like protein-coding Atac153_MAPQ30_peak_1809 chr13 48033341 48033341 + 3.15725 NA Intergenic 7SLRNA|srpRNA|srpRNA 542121 NM_003850 8803 Hs.743361 NM_003850 HPRD:06798 SUCLA2 A-BETA|MTDPS5|SCS-betaA succinate-CoA ligase, ADP-forming, beta subunit protein-coding Atac153_MAPQ30_peak_1811 chr13 50361031 50361031 + 3.15725 NA intron (NM_002267, intron 1 of 16) intron (NM_002267, intron 1 of 16) 6026 NM_002267 3839 Hs.527919 NM_002267 HPRD:03536 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin alpha 3 (importin alpha 4) protein-coding Atac153_MAPQ30_peak_2516 chr16 56332077 56332077 + 3.15725 NA intron (NM_138736, intron 3 of 7) AluJo|SINE|Alu 52645 NR_037499 100500891 NR_037499 MIR3935 - microRNA 3935 ncRNA Atac153_MAPQ30_peak_6671 chr9 87302605 87302605 + 3.15725 NA intron (NM_001007097, intron 2 of 12) intron (NM_001007097, intron 2 of 12) 17313 NM_001018064 4915 Hs.494312 NM_006180 HPRD:02712 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic tyrosine kinase, receptor, type 2 protein-coding Atac153_MAPQ30_peak_2143 chr15 42300199 42300199 + 3.15725 NA intron (NM_001206670, intron 2 of 19) intron (NM_001206670, intron 2 of 19) 35238 NR_120334 101928388 Hs.738043 NR_120334 ENSG00000246740 LOC101928388 - uncharacterized LOC101928388 ncRNA Atac153_MAPQ30_peak_4910 chr3 171178893 171178893 + 3.15725 NA promoter-TSS (NM_001161566) promoter-TSS (NM_001161566) -696 NM_001161562 23043 Hs.34024 NM_015028 HPRD:18206 TNIK - TRAF2 and NCK interacting kinase protein-coding Atac153_MAPQ30_peak_1886 chr13 114558904 114558904 + 3.15725 NA intron (NM_000820, intron 2 of 14) intron (NM_000820, intron 2 of 14) 8142 NM_000820 2621 Hs.646346 NM_000820 HPRD:02705 GAS6 AXLLG|AXSF growth arrest-specific 6 protein-coding Atac153_MAPQ30_peak_365 chr1 145039647 145039647 + 3.15725 NA 5' UTR (NM_001198832, exon 1 of 46) 5' UTR (NM_001198832, exon 1 of 46) 348 NM_001198832 9659 Hs.584841 NM_014644 HPRD:10482 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding Atac153_MAPQ30_peak_4537 chr3 5327791 5327791 + 3.15725 NA Intergenic L1M1|LINE|L1 -35851 NR_039953 100616334 NR_039953 miRBase:MI0017437 MIR4790 - microRNA 4790 ncRNA Atac153_MAPQ30_peak_2979 chr17 80984195 80984195 + 3.15725 NA intron (NM_001009905, intron 4 of 12) L1ME3F|LINE|L1 25491 NM_001009905 146712 Hs.607824 NM_001009905 HPRD:14071 B3GNTL1 B3GNT8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 protein-coding Atac153_MAPQ30_peak_166 chr1 30600158 30600158 + 3.15725 NA Intergenic Intergenic -89699 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LOC101929406 - uncharacterized LOC101929406 ncRNA Atac153_MAPQ30_peak_135 chr1 22216995 22216995 + 3.15725 NA intron (NM_001291860, intron 4 of 96) intron (NM_001291860, intron 4 of 96) 46795 NM_001291860 3339 Hs.562227 NM_005529 HPRD:00804 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding Atac153_MAPQ30_peak_1256 chr11 71286484 71286484 + 3.15725 NA Intergenic ERVL-E-int|LTR|ERVL 7437 NM_001005405 440051 Hs.679617 NM_001005405 HPRD:17248 KRTAP5-11 KRTAP5-5|KRTAP5-6|KRTAP5.11 keratin associated protein 5-11 protein-coding Atac153_MAPQ30_peak_1929 chr14 56884973 56884973 + 3.15725 NA Intergenic LTR16A|LTR|ERVL -161538 NM_017799 54916 Hs.497253 NM_017799 HPRD:12624 TMEM260 C14orf101 transmembrane protein 260 protein-coding Atac153_MAPQ30_peak_4838 chr3 129352245 129352245 + 3.15725 NA Intergenic Intergenic -26663 NM_015103 23129 Hs.301685 NM_015103 HPRD:05046 PLXND1 PLEXD1 plexin D1 protein-coding Atac153_MAPQ30_peak_4830 chr3 128168040 128168040 + 3.15725 NA Intergenic L1MC5|LINE|L1 -14397 NR_037890 285224 Hs.683815 NR_037890 ENSG00000242049 DNAJB8-AS1 - DNAJB8 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3380 chr2 2706931 2706931 + 3.15725 NA Intergenic Intergenic -371886 NM_015025 23040 Hs.434418 NM_015025 HPRD:14797 MYT1L NZF1|ZC2HC4B myelin transcription factor 1-like protein-coding Atac153_MAPQ30_peak_3198 chr19 4103494 4103494 + 3.15725 NA intron (NM_030662, intron 3 of 10) intron (NM_030662, intron 3 of 10) 20632 NM_030662 5605 Hs.465627 NM_030662 HPRD:03164 MAP2K2 CFC4|MAPKK2|MEK2|MKK2|PRKMK2 mitogen-activated protein kinase kinase 2 protein-coding Atac153_MAPQ30_peak_3559 chr2 65682200 65682200 + 3.15725 NA Intergenic L1MC4|LINE|L1 -22544 NM_181784 200734 Hs.59332 NM_181784 HPRD:18100 SPRED2 Spred-2 sprouty-related, EVH1 domain containing 2 protein-coding Atac153_MAPQ30_peak_6801 chr9 127078483 127078483 + 3.15725 NA intron (NM_001166171, intron 5 of 10) intron (NM_001166171, intron 5 of 10) 23784 NM_001166169 10783 Hs.197071 NM_014397 HPRD:05348 NEK6 SID6-1512 NIMA-related kinase 6 protein-coding Atac153_MAPQ30_peak_49 chr1 7750587 7750587 + 3.15725 NA intron (NM_015215, intron 11 of 22) intron (NM_015215, intron 11 of 22) -80742 NM_004781 9341 Hs.66708 NM_004781 HPRD:04711 VAMP3 CEB vesicle-associated membrane protein 3 protein-coding Atac153_MAPQ30_peak_5663 chr6 39014962 39014962 + 3.15725 NA Intergenic MLT1J|LTR|ERVL-MaLR -1595 NM_002062 2740 Hs.389103 NM_002062 HPRD:00677 GLP1R - glucagon-like peptide 1 receptor protein-coding Atac153_MAPQ30_peak_908 chr10 111625448 111625448 + 3.15725 NA intron (NR_030724, intron 18 of 18) LTR87|LTR|ERVL? 57863 NM_001167604 7511 Hs.390623 NM_020383 HPRD:03899 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding Atac153_MAPQ30_peak_7269 chrX 148645085 148645085 + 3.15725 NA Intergenic Intergenic 19019 NM_001171909 91966 Hs.534641 NM_178124 HPRD:06625 CXorf40A CXorf40|EOLA1 chromosome X open reading frame 40A protein-coding Atac153_MAPQ30_peak_1440 chr12 4159175 4159175 + 3.15725 NA Intergenic Intergenic -176561 NM_001286521 57097 Hs.657268 NM_020367 HPRD:15101 PARP11 ARTD11|C12orf6|MIB006 poly (ADP-ribose) polymerase family, member 11 protein-coding Atac153_MAPQ30_peak_6330 chr8 27800782 27800782 + 3.15725 NA intron (NM_173833, intron 3 of 8) AluJb|SINE|Alu 49587 NM_173833 286133 Hs.591833 NM_173833 HPRD:11356 SCARA5 NET33|Tesr scavenger receptor class A, member 5 protein-coding Atac153_MAPQ30_peak_7238 chrX 137929462 137929462 + 3.15725 NA intron (NM_001139498, intron 2 of 5) MIRb|SINE|MIR 20255 NM_001139502 2258 Hs.6540 NM_004114 HPRD:02090 FGF13 FGF-13|FGF2|FHF-2|FHF2 fibroblast growth factor 13 protein-coding Atac153_MAPQ30_peak_5963 chr7 35533187 35533187 + 3.15725 NA Intergenic Intergenic 179721 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA Atac153_MAPQ30_peak_4197 chr20 59104657 59104657 + 3.15725 NA Intergenic MLT1E2|LTR|ERVL-MaLR 51488 NR_039758 100616362 NR_039758 miRBase:MI0016900 MIR4533 - microRNA 4533 ncRNA Atac153_MAPQ30_peak_1353 chr11 119949393 119949393 + 3.15725 NA Intergenic Intergenic 59470 NM_012101 23650 Hs.504115 NM_012101 HPRD:10280 TRIM29 ATDC tripartite motif containing 29 protein-coding Atac153_MAPQ30_peak_1273 chr11 76853033 76853033 + 3.15725 NA intron (NM_001127180, intron 2 of 48) L2a|LINE|L2 13717 NM_001127180 4647 Hs.370421 NM_000260 HPRD:02043 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding Atac153_MAPQ30_peak_6522 chr8 139577011 139577011 + 3.15725 NA Intergenic LTR53|LTR|ERVL -67946 NM_015912 51059 Hs.126024 NM_015912 HPRD:14230 FAM135B C8ORFK32 family with sequence similarity 135, member B protein-coding Atac153_MAPQ30_peak_4322 chr21 46479888 46479888 + 3.15725 NA Intergenic Intergenic 13238 NR_027292 728039 Hs.309203 NM_032653 SSR4P1 C21orf122|PRED57|PRED90 signal sequence receptor, delta pseudogene 1 pseudo Atac153_MAPQ30_peak_2371 chr16 6046261 6046261 + 3.15725 NA Intergenic Intergenic -22871 NM_001142333 54715 Hs.459842 NM_018723 HPRD:16091 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding Atac153_MAPQ30_peak_1124 chr11 20654530 20654530 + 3.15725 NA intron (NM_004211, intron 10 of 15) intron (NM_004211, intron 10 of 15) 33584 NM_004211 9152 Hs.136557 NM_004211 SLC6A5 GLYT-2|GLYT2|HKPX3|NET1 solute carrier family 6 (neurotransmitter transporter), member 5 protein-coding Atac153_MAPQ30_peak_1990 chr14 75437337 75437337 + 3.15725 NA Intergenic Intergenic -14870 NM_001207012 5228 Hs.252820 NM_002632 HPRD:03076 PGF D12S1900|PGFL|PLGF|PlGF-2|SHGC-10760 placental growth factor protein-coding Atac153_MAPQ30_peak_2180 chr15 59838203 59838203 + 3.15725 NA Intergenic L4|LINE|RTE -65779 NM_004751 9245 Hs.194710 NM_004751 HPRD:06018 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding Atac153_MAPQ30_peak_5082 chr4 54367818 54367818 + 3.15725 NA intron (NR_046622, intron 2 of 3) MIRb|SINE|MIR 1574 NR_046622 100873939 Hs.662372 NR_046622 ENSG00000250930 LNX1-AS1 - LNX1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4326 chr21 47610431 47610431 + 3.15725 NA 3' UTR (NM_001145437, exon 21 of 21) 3' UTR (NM_001145437, exon 21 of 21) -6058 NM_032261 84221 Hs.381214 NM_032261 HPRD:10753 SPATC1L C21orf56 spermatogenesis and centriole associated 1-like protein-coding Atac153_MAPQ30_peak_2837 chr17 43189995 43189995 + 3.15725 NA exon (NM_133373, exon 15 of 15) exon (NM_133373, exon 15 of 15) 1806 NR_106842 102465470 NR_106842 MIR6784 hsa-mir-6784 microRNA 6784 ncRNA Atac153_MAPQ30_peak_5064 chr4 40247403 40247403 + 3.15725 NA Intergenic Intergenic 48876 NM_001278363 399 Hs.654594 NM_004310 RHOH ARHH|TTF ras homolog family member H protein-coding Atac153_MAPQ30_peak_2311 chr15 91463651 91463651 + 3.15725 NA 3' UTR (NM_006122, exon 22 of 22) 3' UTR (NM_006122, exon 22 of 22) -9759 NM_001039675 55898 Hs.389461 NM_017979 HPRD:18070 UNC45A GC-UNC45|GCUNC-45|GCUNC45|IRO039700|SMAP-1|SMAP1|UNC-45A unc-45 homolog A (C. elegans) protein-coding Atac153_MAPQ30_peak_1141 chr11 34271813 34271813 + 3.15725 NA intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 107742 NM_145804 25841 Hs.23361 NM_145804 HPRD:10624 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB (POZ) domain containing 2 protein-coding Atac153_MAPQ30_peak_5213 chr5 1244728 1244728 + 3.15725 NA exon (NM_182632, exon 11 of 12) exon (NM_182632, exon 11 of 12) 19258 NM_182632 348932 Hs.213284 NM_182632 HPRD:15396 SLC6A18 Xtrp2 solute carrier family 6 (neutral amino acid transporter), member 18 protein-coding Atac153_MAPQ30_peak_1533 chr12 56035347 56035347 + 3.15725 NA Intergenic L2|LINE|L2 4671 NM_206899 121130 Hs.554551 NM_206899 HPRD:14895 OR10P1 OR10P1P|OR10P2P|OR10P3P|OR12-7|OST701 olfactory receptor, family 10, subfamily P, member 1 protein-coding Atac153_MAPQ30_peak_731 chr10 45879480 45879480 + 3.15725 NA intron (NM_001256153, intron 2 of 13) LTR33|LTR|ERVL 9856 NM_000698 240 Hs.89499 NM_000698 HPRD:01065 ALOX5 5-LO|5-LOX|5LPG|LOG5 arachidonate 5-lipoxygenase protein-coding Atac153_MAPQ30_peak_2491 chr16 35023074 35023074 + 3.15725 NA Intergenic SST1|Satellite|centr 42151 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 FLJ26245 - uncharacterized LOC400533 ncRNA Atac153_MAPQ30_peak_2670 chr17 4404299 4404299 + 3.15725 NA intron (NM_001124758, intron 1 of 12) intron (NM_001124758, intron 1 of 12) 2170 NM_001124758 124976 Hs.22824 NM_001124758 SPNS2 - spinster homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_7198 chrX 124422857 124422857 + 3.15725 NA Intergenic MSTD-int|LTR|ERVL-MaLR -31112 NM_001195272 100129520 Hs.728728 NM_001195272 LOC100129520 - testis expressed sequence 13-like protein-coding Atac153_MAPQ30_peak_7231 chrX 136177920 136177920 + 3.15725 NA Intergenic MER94|DNA|hAT-Blackjack -64087 NM_054021 83550 Hs.350569 NM_054021 HPRD:02315 GPR101 GPCR6 G protein-coupled receptor 101 protein-coding Atac153_MAPQ30_peak_1511 chr12 49664293 49664293 + 3.15725 NA intron (NM_032704, intron 3 of 3) intron (NM_032704, intron 3 of 3) 5428 NM_032704 84790 Hs.652390 NM_032704 HPRD:06747 TUBA1C TUBA6|bcm948 tubulin, alpha 1c protein-coding Atac153_MAPQ30_peak_6909 chrX 12425029 12425029 + 3.15725 NA intron (NM_014728, intron 1 of 16) MLT1D|LTR|ERVL-MaLR 268444 NM_014728 9758 Hs.657507 NM_014728 HPRD:10011 FRMPD4 PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding Atac153_MAPQ30_peak_2727 chr17 17107268 17107268 + 3.15725 NA intron (NM_178836, intron 1 of 1) MER53|DNA|hAT 2378 NM_178836 201164 Hs.729079 NM_178836 HPRD:14126 PLD6 ZUC phospholipase D family, member 6 protein-coding Atac153_MAPQ30_peak_6517 chr8 139290389 139290389 + 3.15725 NA intron (NM_015912, intron 3 of 19) intron (NM_015912, intron 3 of 19) 218676 NM_015912 51059 Hs.126024 NM_015912 HPRD:14230 FAM135B C8ORFK32 family with sequence similarity 135, member B protein-coding Atac153_MAPQ30_peak_3489 chr2 31251092 31251092 + 3.15725 NA intron (NM_024572, intron 1 of 14) intron (NM_024572, intron 1 of 14) 101414 NM_001253827 79623 Hs.468058 NM_024572 HPRD:12194 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding Atac153_MAPQ30_peak_7012 chrX 46677900 46677900 + 3.15725 NA Intergenic Intergenic -18447 NM_006915 6102 Hs.44766 NM_006915 HPRD:02424 RP2 DELXp11.3|NM23-H10|NME10|TBCCD2|XRP2 retinitis pigmentosa 2 (X-linked recessive) protein-coding Atac153_MAPQ30_peak_6341 chr8 37085049 37085049 + 3.15725 NA Intergenic Intergenic 266382 NR_121620 100507420 Hs.105962 NR_121620 LOC100507420 - uncharacterized LOC100507420 ncRNA Atac153_MAPQ30_peak_5282 chr5 17155952 17155952 + 3.15725 NA intron (NR_027253, intron 2 of 2) intron (NR_027253, intron 2 of 2) -60980 NM_001271606 10409 Hs.201641 NM_006317 HPRD:08389 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding Atac153_MAPQ30_peak_4256 chr21 35637230 35637230 + 3.15725 NA Intergenic MLT1A0|LTR|ERVL-MaLR 84252 NR_027266 114036 Hs.720230 NM_153751 ENSG00000227456 LINC00310 C21orf82|NCRNA00310 long intergenic non-protein coding RNA 310 ncRNA Atac153_MAPQ30_peak_4199 chr20 59379740 59379740 + 3.15725 NA Intergenic Intergenic -274380 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LOC100506470 - uncharacterized LOC100506470 ncRNA Atac153_MAPQ30_peak_6602 chr9 27416932 27416932 + 3.15725 NA intron (NM_024761, intron 2 of 3) intron (NM_024761, intron 2 of 3) -107380 NM_020124 56832 Hs.591083 NM_020124 HPRD:17133 IFNK IFNT1|INFE1 interferon, kappa protein-coding Atac153_MAPQ30_peak_4338 chr22 19968070 19968070 + 3.15725 NA intron (NM_001670, intron 5 of 19) intron (NM_001670, intron 5 of 19) 16794 NR_039918 100616414 NR_039918 MIR4761 - microRNA 4761 ncRNA Atac153_MAPQ30_peak_2431 chr16 20386310 20386310 + 3.15725 NA intron (NM_174924, intron 4 of 11) intron (NM_174924, intron 4 of 11) -22110 NM_003361 7369 Hs.654425 NM_003361 HPRD:11771 UMOD ADMCKD2|FJHN|HNFJ|HNFJ1|MCKD2|THGP|THP uromodulin protein-coding Atac153_MAPQ30_peak_369 chr1 151098556 151098556 + 3.15725 NA Intergenic Intergenic 20584 NM_001178061 10500 Hs.516316 NM_030913 HPRD:10220 SEMA6C SEMAY|m-SemaY|m-SemaY2 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C protein-coding Atac153_MAPQ30_peak_292 chr1 80341779 80341779 + 3.15725 NA Intergenic L1PA15|LINE|L1 -869284 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ELTD1 ETL|KPG_003 EGF, latrophilin and seven transmembrane domain containing 1 protein-coding Atac153_MAPQ30_peak_447 chr1 179711760 179711760 + 3.15725 NA promoter-TSS (NM_173509) promoter-TSS (NM_173509) -538 NM_173509 148753 Hs.729631 NM_173509 HPRD:14454 FAM163A C1orf76|NDSP family with sequence similarity 163, member A protein-coding Atac153_MAPQ30_peak_2283 chr15 80870477 80870477 + 3.15725 NA intron (NM_014862, intron 15 of 18) intron (NM_014862, intron 15 of 18) -2967 NR_049837 100847042 NR_049837 MIR5572 - microRNA 5572 ncRNA Atac153_MAPQ30_peak_3191 chr19 3248168 3248168 + 3.15725 NA intron (NR_033342, intron 1 of 12) AluJr|SINE|Alu 22685 NR_033342 60680 Hs.655747 NM_021938 HPRD:12535 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP, Elav-like family member 5 protein-coding Atac153_MAPQ30_peak_1234 chr11 67979867 67979867 + 3.15725 NA intron (NM_001300909, intron 1 of 8) intron (NM_001300909, intron 1 of 8) 917 NM_016028 51111 Hs.632120 NM_016028 HPRD:11616 SUV420H1 CGI85|KMT5B suppressor of variegation 4-20 homolog 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_1955 chr14 65332533 65332533 + 3.15725 NA Intergenic Intergenic -42667 NM_001024858 6710 Hs.417303 NM_000347 HPRD:01686 SPTB EL3|HS2|HSPTB1|SPH2 spectrin, beta, erythrocytic protein-coding Atac153_MAPQ30_peak_2539 chr16 67327235 67327235 + 3.15725 NA intron (NM_001100915, intron 12 of 15) intron (NM_001100915, intron 12 of 15) 13743 NM_001129731 25894 Hs.188781 NM_015432 HPRD:10890 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 protein-coding Atac153_MAPQ30_peak_2926 chr17 72767468 72767468 + 3.15725 NA 3' UTR (NM_015654, exon 7 of 7) 3' UTR (NM_015654, exon 7 of 7) 5002 NM_015654 26151 Hs.144058 NM_015654 HPRD:13259 NAT9 EBSP, hNATL N-acetyltransferase 9 (GCN5-related, putative) protein-coding Atac153_MAPQ30_peak_5134 chr4 107640043 107640043 + 3.15725 NA Intergenic L1M1|LINE|L1 317410 NM_014421 27123 Hs.211869 NM_014421 HPRD:05658 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding Atac153_MAPQ30_peak_7042 chrX 54161460 54161460 + 3.15725 NA exon (NM_017848, exon 7 of 16) exon (NM_017848, exon 7 of 16) 48231 NM_017848 54954 Hs.86045 NM_017848 HPRD:06480 FAM120C CXorf17|ORF34 family with sequence similarity 120C protein-coding Atac153_MAPQ30_peak_4000 chr20 12995189 12995189 + 3.15725 NA intron (NM_018327, intron 1 of 11) intron (NM_018327, intron 1 of 11) 5562 NM_018327 55304 Hs.425023 NM_018327 HPRD:12765 SPTLC3 C20orf38|LCB2B|LCB3|SPT3|SPTLC2L|dJ718P11|dJ718P11.1|hLCB2b serine palmitoyltransferase, long chain base subunit 3 protein-coding Atac153_MAPQ30_peak_2347 chr16 117148 117148 + 3.15725 NA intron (NM_022450, intron 1 of 17) intron (NM_022450, intron 1 of 17) 5481 NM_022450 64285 Hs.744992 NM_022450 HPRD:07027 RHBDF1 C16orf8|Dist1|EGFR-RS|gene-89|gene-90|hDist1 rhomboid 5 homolog 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_788 chr10 72481617 72481617 + 3.15725 NA intron (NM_080722, intron 4 of 21) Kanga1a|DNA|TcMar-Tc2 49058 NM_080722 140766 Hs.352156 NM_080722 HPRD:06329 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif, 14 protein-coding Atac153_MAPQ30_peak_2882 chr17 58637836 58637836 + 3.15725 NA Intergenic HERVL18-int|LTR|ERVL -34235 NM_001282476 10513 Hs.84084 NM_006380 HPRD:05616 APPBP2 APP-BP2|HS.84084|PAT1 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 protein-coding Atac153_MAPQ30_peak_500 chr1 205052866 205052866 + 3.15725 NA exon (NM_203376, exon 1 of 1) exon (NM_203376, exon 1 of 1) 722 NM_203376 388730 Hs.146928 NM_203376 HPRD:14205 TMEM81 HC3107|KVLA2788|UNQ2788 transmembrane protein 81 protein-coding Atac153_MAPQ30_peak_542 chr1 223884059 223884059 + 3.15725 NA Intergenic Intergenic -5236 NM_001146068 824 Hs.350899 NM_001748 HPRD:00254 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2, (m/II) large subunit protein-coding Atac153_MAPQ30_peak_3192 chr19 3611845 3611845 + 3.15725 NA non-coding (NR_038865, exon 3 of 4) non-coding (NR_038865, exon 3 of 4) 4600 NR_038865 404665 Hs.719726 NM_001012712 ENSG00000226800 CACTIN-AS1 C19orf29-AS1|C19orf29OS CACTIN antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3664 chr2 109153236 109153236 + 3.15725 NA intron (NM_001193483, intron 1 of 9) AluJb|SINE|Alu 2425 NM_001193483 3987 Hs.597715 NM_004987 HPRD:03978 LIMS1 PINCH|PINCH-1|PINCH1 LIM and senescent cell antigen-like domains 1 protein-coding Atac153_MAPQ30_peak_3951 chr2 240403110 240403110 + 3.15725 NA Intergenic L1MB3|LINE|L1 -80467 NM_006037 9759 Hs.20516 NM_006037 HPRD:05610 HDAC4 AHO3|BDMR|HA6116|HD4|HDAC-4|HDAC-A|HDACA histone deacetylase 4 protein-coding Atac153_MAPQ30_peak_4532 chr3 4121951 4121951 + 3.15725 NA Intergenic Intergenic -223037 NM_001276325 6419 Hs.475300 NM_006515 HPRD:10225 SETMAR HsMar1|METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding Atac153_MAPQ30_peak_6267 chr8 6724856 6724856 + 3.15725 NA Intergenic Intergenic 10673 NM_005218 1672 Hs.32949 NM_005218 HPRD:03634 DEFB1 BD1|DEFB-1|DEFB101|HBD1 defensin, beta 1 protein-coding Atac153_MAPQ30_peak_6359 chr8 41716028 41716028 + 3.15725 NA intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) 38252 NM_001142446 286 Hs.654438 NM_000037 HPRD:01693 ANK1 ANK|SPH1|SPH2 ankyrin 1, erythrocytic protein-coding Atac153_MAPQ30_peak_834 chr10 82489731 82489731 + 3.15725 NA Intergenic Intergenic 189156 NM_001145719 387694 Hs.147643 NM_207372 HPRD:18050 SH2D4B - SH2 domain containing 4B protein-coding Atac153_MAPQ30_peak_2635 chr16 88378085 88378085 + 3.15725 NA Intergenic Intergenic -115794 NM_001127464 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding Atac153_MAPQ30_peak_2002 chr14 78705433 78705433 + 3.15725 NA intron (NR_073547, intron 1 of 20) intron (NR_073547, intron 1 of 20) 68717 NR_073547 9369 Hs.368307 NM_004796 NRXN3 C14orf60 neurexin 3 protein-coding Atac153_MAPQ30_peak_6998 chrX 40354225 40354225 + 3.15725 NA Intergenic LTR82B|LTR|ERVL -85991 NM_005765 10159 Hs.495960 NM_005765 HPRD:06454 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase, H+ transporting, lysosomal accessory protein 2 protein-coding Atac153_MAPQ30_peak_5315 chr5 61458211 61458211 + 3.15725 NA Intergenic MER52A|LTR|ERV1 -143778 NM_001243953 3796 Hs.558351 NM_004520 KIF2A CDCBM3|HK2|KIF2 kinesin heavy chain member 2A protein-coding Atac153_MAPQ30_peak_1215 chr11 64168047 64168047 + 3.15725 NA Intergenic ERVL-E-int|LTR|ERVL 31973 NR_031602 100302280 NR_031602 MIR1237 MIRN1237|hsa-mir-1237 microRNA 1237 ncRNA Atac153_MAPQ30_peak_2472 chr16 29963455 29963455 + 3.15725 NA Intergenic L1M1|LINE|L1 -9896 NM_194280 124446 Hs.460574 NM_194280 HPRD:18546 TMEM219 IGFBP-3R transmembrane protein 219 protein-coding Atac153_MAPQ30_peak_1447 chr12 5342042 5342042 + 3.15725 NA Intergenic Intergenic 7236 NR_120476 101929584 Hs.436529 NR_120476 ENSG00000256115 LOC101929584 - uncharacterized LOC101929584 ncRNA Atac153_MAPQ30_peak_3597 chr2 86251155 86251155 + 3.15725 NA promoter-TSS (NR_026984) promoter-TSS (NR_026984) -164 NR_026984 90784 Hs.594051 NR_026984 LOC90784 - uncharacterized LOC90784 ncRNA Atac153_MAPQ30_peak_420 chr1 164677272 164677272 + 3.15725 NA intron (NM_001204961, intron 2 of 7) intron (NM_001204961, intron 2 of 7) 66606 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA Atac153_MAPQ30_peak_51 chr1 7780860 7780860 + 3.15725 NA intron (NM_015215, intron 11 of 22) intron (NM_015215, intron 11 of 22) -50469 NM_004781 9341 Hs.66708 NM_004781 HPRD:04711 VAMP3 CEB vesicle-associated membrane protein 3 protein-coding Atac153_MAPQ30_peak_271 chr1 55481102 55481102 + 3.15725 NA Intergenic Intergenic 16485 NM_057176 7809 Hs.151291 NM_057176 BSND BART|DFNB73 barttin CLCNK-type chloride channel accessory beta subunit protein-coding Atac153_MAPQ30_peak_4178 chr20 55633454 55633454 + 3.15725 NA Intergenic Tigger1|DNA|TcMar-Tigger -155298 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3075 chr18 44063325 44063325 + 3.15725 NA intron (NM_144612, intron 39 of 39) intron (NM_144612, intron 39 of 39) 35724 NM_001173129 125336 Hs.345877 NM_144612 HPRD:08316 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding Atac153_MAPQ30_peak_999 chr10 130947760 130947760 + 3.15725 NA Intergenic Intergenic -317694 NM_002412 4255 Hs.501522 NM_002412 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding Atac153_MAPQ30_peak_5122 chr4 89087845 89087845 + 3.15725 NA intron (NM_001257386, intron 1 of 15) intron (NM_001257386, intron 1 of 15) -7834 NM_004827 9429 Hs.480218 NM_004827 HPRD:04783 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR1|UAQTL1 ATP-binding cassette, sub-family G (WHITE), member 2 protein-coding Atac153_MAPQ30_peak_879 chr10 103996822 103996822 + 3.15725 NA intron (NM_005029, intron 1 of 3) intron (NM_005029, intron 1 of 3) 4409 NM_005029 5309 Hs.137568 NM_005029 HPRD:04051 PITX3 ASMD|ASOD|CTPP4|CTRCT11|PTX3 paired-like homeodomain 3 protein-coding Atac153_MAPQ30_peak_5818 chr6 154935431 154935431 + 3.15725 NA Intergenic Intergenic -103678 NM_173515 154043 Hs.16064 NM_173515 CNKSR3 MAGI1 CNKSR family member 3 protein-coding Atac153_MAPQ30_peak_6932 chrX 18727969 18727969 + 3.15725 NA intron (NM_152226, intron 4 of 17) L1MB5|LINE|L1 -17163 NR_046642 100874004 NR_046642 PPEF1-AS1 - PPEF1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4936 chr3 186915464 186915464 + 3.15725 NA exon (NM_153708, exon 1 of 2) exon (NM_153708, exon 1 of 2) 190 NM_153708 132112 Hs.518480 NM_153708 HPRD:16449 RTP1 Z3CXXC1 receptor (chemosensory) transporter protein 1 protein-coding Atac153_MAPQ30_peak_3404 chr2 9441411 9441411 + 3.15725 NA intron (NM_003887, intron 3 of 27) intron (NM_003887, intron 3 of 27) 94517 NM_003887 8853 Hs.555902 NM_003887 HPRD:04820 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding Atac153_MAPQ30_peak_1646 chr12 112681414 112681414 + 3.15725 NA intron (NM_001109662, intron 31 of 75) intron (NM_001109662, intron 31 of 75) -80289 NR_106921 102465519 NR_106921 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA Atac153_MAPQ30_peak_121 chr1 20468918 20468918 + 3.15725 NA intron (NM_022819, intron 2 of 4) intron (NM_022819, intron 2 of 4) 3095 NM_022819 64600 Hs.302034 NM_022819 HPRD:07499 PLA2G2F - phospholipase A2, group IIF protein-coding Atac153_MAPQ30_peak_5493 chr5 170492504 170492504 + 3.15725 NA intron (NM_022897, intron 14 of 27) MER1B|DNA|hAT-Charlie 203608 NM_022897 64901 Hs.410810 NM_022897 HPRD:05847 RANBP17 - RAN binding protein 17 protein-coding Atac153_MAPQ30_peak_4009 chr20 17438843 17438843 + 3.15725 NA intron (NM_002594, intron 10 of 11) intron (NM_002594, intron 10 of 11) 73171 NM_001195 631 Hs.129702 NM_001195 HPRD:04494 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1, filensin protein-coding Atac153_MAPQ30_peak_4515 chr22 49337694 49337694 + 3.15725 NA Intergenic Intergenic 75112 NR_038944 100128946 Hs.535676 NR_038944 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA Atac153_MAPQ30_peak_164 chr1 30538334 30538334 + 3.15725 NA Intergenic Intergenic -27875 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LOC101929406 - uncharacterized LOC101929406 ncRNA Atac153_MAPQ30_peak_5229 chr5 3536286 3536286 + 3.15725 NA promoter-TSS (NR_033898) promoter-TSS (NR_033898) -78 NR_033898 285577 Hs.582442 NR_033898 ENSG00000248118 LINC01019 - long intergenic non-protein coding RNA 1019 ncRNA Atac153_MAPQ30_peak_995 chr10 130778910 130778910 + 3.15725 NA Intergenic Intergenic -486544 NM_002412 4255 Hs.501522 NM_002412 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding Atac153_MAPQ30_peak_261 chr1 53539918 53539918 + 3.15725 NA intron (NM_001199080, intron 5 of 12) intron (NM_001199080, intron 5 of 12) 12033 NM_001199081 127435 Hs.586141 NM_153703 HPRD:10557 PODN PCAN|SLRR5A podocan protein-coding Atac153_MAPQ30_peak_3728 chr2 130137579 130137579 + 3.15725 NA Intergenic Intergenic -106115 NR_122040 151121 Hs.531687 NM_001033657 ENSG00000204460 LOC151121 - uncharacterized LOC151121 ncRNA Atac153_MAPQ30_peak_1946 chr14 64342099 64342099 + 3.15725 NA intron (NM_182914, intron 1 of 115) intron (NM_182914, intron 1 of 115) 22416 NM_182914 23224 Hs.745014 NM_015180 HPRD:09763 SYNE2 EDMD5|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing, nuclear envelope 2 protein-coding Atac153_MAPQ30_peak_3057 chr18 35087292 35087292 + 3.15725 NA intron (NM_001025087, intron 1 of 12) intron (NM_001025087, intron 1 of 12) 58708 NM_001025089 56853 Hs.435976 NM_020180 HPRD:12534 CELF4 BRUNOL-4|BRUNOL4 CUGBP, Elav-like family member 4 protein-coding Atac153_MAPQ30_peak_75 chr1 12727986 12727986 + 3.15725 NA TTS (NM_001013630) TTS (NM_001013630) 23420 NM_001013630 343066 Hs.209954 NM_001013630 HPRD:15402 AADACL4 - arylacetamide deacetylase-like 4 protein-coding Atac153_MAPQ30_peak_4163 chr20 52536536 52536536 + 3.15725 NA Intergenic Intergenic -44288 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo Atac153_MAPQ30_peak_6448 chr8 103910987 103910987 + 3.15725 NA Intergenic MIRb|SINE|MIR -34590 NM_015878 51582 Hs.459106 NM_015878 HPRD:07443 AZIN1 OAZI|OAZIN|ODC1L antizyme inhibitor 1 protein-coding Atac153_MAPQ30_peak_2036 chr14 94488021 94488021 + 3.15725 NA Intergenic MLT1F2|LTR|ERVL-MaLR -4703 NM_023112 78990 Hs.278815 NM_023112 HPRD:07620 OTUB2 C14orf137|OTB2|OTU2 OTU deubiquitinase, ubiquitin aldehyde binding 2 protein-coding Atac153_MAPQ30_peak_3137 chr18 68062811 68062811 + 3.15725 NA Intergenic Intergenic -10984 NR_110764 101060542 Hs.586967 NR_110764 ENSG00000266278 LOC101060542 - uncharacterized LOC101060542 ncRNA Atac153_MAPQ30_peak_6050 chr7 69227860 69227860 + 3.15725 NA intron (NM_001127231, intron 1 of 17) intron (NM_001127231, intron 1 of 17) 163955 NM_001127231 26053 Hs.21631 NM_015570 HPRD:06276 AUTS2 FBRSL2|MRD26 autism susceptibility candidate 2 protein-coding Atac153_MAPQ30_peak_1757 chr13 21606302 21606302 + 3.15725 NA intron (NM_014572, intron 2 of 7) L1M4b|LINE|L1 29420 NM_014572 26524 Hs.78960 NM_014572 HPRD:07277 LATS2 KPM large tumor suppressor kinase 2 protein-coding Atac153_MAPQ30_peak_3692 chr2 121426896 121426896 + 3.15725 NA Intergenic MamRep564|Unknown|Unknown -127971 NM_005270 2736 Hs.111867 NM_005270 HPRD:01312 GLI2 HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding Atac153_MAPQ30_peak_747 chr10 48337281 48337281 + 3.15725 NA Intergenic Intergenic -17808 NM_153034 118738 Hs.27788 NM_153034 HPRD:15801 ZNF488 - zinc finger protein 488 protein-coding Atac153_MAPQ30_peak_3344 chr19 51961323 51961323 + 3.15725 NA exon (NM_014442, exon 1 of 7) exon (NM_014442, exon 1 of 7) 385 NM_014442 27181 Hs.447899 NM_014442 HPRD:16132 SIGLEC8 SAF2|SIGLEC-8|SIGLEC8L sialic acid binding Ig-like lectin 8 protein-coding Atac153_MAPQ30_peak_7061 chrX 63428212 63428212 + 3.15725 NA Intergenic MIRc|SINE|MIR -2588 NM_152424 139285 Hs.314225 NM_152424 HPRD:06565 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding Atac153_MAPQ30_peak_2819 chr17 39815740 39815740 + 3.15725 NA Intergenic L2b|LINE|L2 -19289 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P - keratin 42 pseudogene pseudo Atac153_MAPQ30_peak_5843 chr6 165290223 165290223 + 3.15725 NA Intergenic ERVL-B4-int|LTR|ERVL 432888 NM_144980 168090 Hs.144734 NM_144980 HPRD:12844 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding Atac153_MAPQ30_peak_167 chr1 30793844 30793844 + 3.15725 NA Intergenic L3|LINE|CR1 -283385 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LOC101929406 - uncharacterized LOC101929406 ncRNA Atac153_MAPQ30_peak_2795 chr17 32146300 32146300 + 3.15725 NA intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -285521 NR_037584 100506677 Hs.652571 NR_037584 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo Atac153_MAPQ30_peak_6885 chrX 1906923 1906923 + 3.15725 NA Intergenic Intergenic 172897 NM_001171039 438 Hs.522572 NM_004043 HPRD:02058 ASMT ASMTY|HIOMT|HIOMTY acetylserotonin O-methyltransferase protein-coding Atac153_MAPQ30_peak_2469 chr16 28521736 28521736 + 3.15725 NA Intergenic AluSz6|SINE|Alu -3581 NM_145659 246778 Hs.528111 NM_145659 HPRD:16307 IL27 IL-27|IL-27A|IL27A|IL27p28|IL30|p28 interleukin 27 protein-coding Atac153_MAPQ30_peak_3911 chr2 235002650 235002650 + 3.15725 NA Intergenic Intergenic 43304 NM_006944 6694 Hs.444488 NM_006944 HPRD:04029 SPP2 SPP-24|SPP24 secreted phosphoprotein 2, 24kDa protein-coding Atac153_MAPQ30_peak_3512 chr2 42314670 42314670 + 3.15725 NA Intergenic Intergenic 39509 NM_138370 91461 Hs.408542 NM_138370 HPRD:18707 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding Atac153_MAPQ30_peak_4107 chr20 41560226 41560226 + 3.15725 NA intron (NM_133170, intron 1 of 31) intron (NM_133170, intron 1 of 31) 246103 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA Atac153_MAPQ30_peak_1594 chr12 97720897 97720897 + 3.15725 NA Intergenic Intergenic -137902 NR_024037 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript (non-protein coding) ncRNA Atac153_MAPQ30_peak_2260 chr15 76849919 76849919 + 3.15725 NA intron (NM_001145923, intron 23 of 31) MSTA|LTR|ERVL-MaLR 220772 NM_145805 64843 Hs.444677 NM_145805 HPRD:11053 ISL2 - ISL LIM homeobox 2 protein-coding Atac153_MAPQ30_peak_4305 chr21 44046734 44046734 + 3.15725 NA Intergenic MLT1A|LTR|ERVL-MaLR -27128 NM_001001571 5152 Hs.473927 NM_002606 HPRD:09115 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding Atac153_MAPQ30_peak_1246 chr11 70353463 70353463 + 3.15725 NA intron (NR_110766, intron 2 of 8) intron (NR_110766, intron 2 of 8) 108851 NM_138565 2017 Hs.596164 NM_005231 HPRD:01268 CTTN EMS1 cortactin protein-coding Atac153_MAPQ30_peak_805 chr10 76993632 76993632 + 3.15725 NA TTS (NM_144589) TTS (NM_144589) 2138 NM_144589 118881 Hs.355333 NM_144589 HPRD:08678 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding Atac153_MAPQ30_peak_4554 chr3 10673512 10673512 + 3.15725 NA Intergenic Intergenic -5020 NR_046766 100874325 Hs.143004 NR_046766 ATP2B2-IT2 - ATP2B2 intronic transcript 2 (non-protein coding) ncRNA Atac153_MAPQ30_peak_1508 chr12 48543524 48543524 + 3.15725 NA exon (NM_024095, exon 4 of 4) exon (NM_024095, exon 4 of 4) 7853 NM_024095 140461 Hs.432699 NM_024095 HPRD:10675 ASB8 - ankyrin repeat and SOCS box containing 8 protein-coding Atac153_MAPQ30_peak_1192 chr11 57479202 57479202 + 3.15725 NA promoter-TSS (NR_026593) promoter-TSS (NR_026593) 471 NM_153450 219541 Hs.43619 NM_153450 HPRD:17477 MED19 DT2P1G7|LCMR1 mediator complex subunit 19 protein-coding Atac153_MAPQ30_peak_4588 chr3 14557783 14557783 + 3.15725 NA intron (NM_001080423, intron 11 of 23) intron (NM_001080423, intron 11 of 23) 24067 NM_001080423 80852 Hs.517819 NM_001080423 GRIP2 - glutamate receptor interacting protein 2 protein-coding Atac153_MAPQ30_peak_1147 chr11 35898479 35898479 + 3.15725 NA Intergenic L2c|LINE|L2 -67133 NM_174902 143458 Hs.745134 NM_174902 HPRD:14063 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding Atac153_MAPQ30_peak_5129 chr4 99943189 99943189 + 3.15725 NA intron (NM_015143, intron 1 of 10) intron (NM_015143, intron 1 of 10) 24651 NR_037455 100500867 NR_037455 MIR3684 - microRNA 3684 ncRNA Atac153_MAPQ30_peak_2460 chr16 27264800 27264800 + 3.15725 NA intron (NM_145080, intron 2 of 7) L1MEc|LINE|L1 -14726 NR_037184 400512 Hs.434412 NR_037184 ENSG00000245888 FLJ21408 - uncharacterized LOC400512 ncRNA Atac153_MAPQ30_peak_5949 chr7 30477775 30477775 + 3.15725 NA intron (NM_006092, intron 9 of 13) intron (NM_006092, intron 9 of 13) 40618 NM_006092 10392 Hs.405153 NM_006092 HPRD:05815 NOD1 CARD4|CLR7.1|NLRC1 nucleotide-binding oligomerization domain containing 1 protein-coding Atac153_MAPQ30_peak_2344 chr15 101847968 101847968 + 3.15725 NA non-coding (NR_045387, exon 1 of 1) non-coding (NR_045387, exon 1 of 1) 1541 NR_045387 100507472 Hs.498494 NR_045387 LOC100507472 - uncharacterized LOC100507472 ncRNA Atac153_MAPQ30_peak_4472 chr22 44795386 44795386 + 3.15725 NA Intergenic Intergenic -43821 NR_109966 101927526 Hs.339290 NR_109966 ENSG00000232655 LOC101927526 - uncharacterized LOC101927526 ncRNA Atac153_MAPQ30_peak_2695 chr17 9068839 9068839 + 3.15725 NA intron (NM_004822, intron 3 of 6) intron (NM_004822, intron 3 of 6) 13596 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA Atac153_MAPQ30_peak_1545 chr12 58165705 58165705 + 3.15725 NA promoter-TSS (NM_015433) promoter-TSS (NM_015433) 209 NM_005371 4234 Hs.42957 NM_005371 HPRD:06834 METTL1 C12orf1|TRM8|TRMT8|YDL201w methyltransferase like 1 protein-coding Atac153_MAPQ30_peak_4090 chr20 37086798 37086798 + 3.15725 NA Intergenic AluSg|SINE|Alu 8786 NR_002986 677837 Hs.16936 NR_002986 ENSG00000199266 SNORA60 ACA60 small nucleolar RNA, H/ACA box 60 snoRNA Atac153_MAPQ30_peak_4360 chr22 25485990 25485990 + 3.15725 NA intron (NM_001145206, intron 4 of 10) intron (NM_001145206, intron 4 of 10) 22669 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA Atac153_MAPQ30_peak_6832 chr9 134938939 134938939 + 3.15725 NA intron (NM_001253881, intron 2 of 6) intron (NM_001253881, intron 2 of 6) 16335 NM_001253882 9442 Hs.374262 NM_004269 HPRD:05438 MED27 CRAP34|CRSP34|CRSP8|TRAP37 mediator complex subunit 27 protein-coding Atac153_MAPQ30_peak_3020 chr18 13139929 13139929 + 3.15725 NA Intergenic Intergenic -78800 NM_181482 753 Hs.731853 NM_004338 HPRD:07358 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding Atac153_MAPQ30_peak_4997 chr4 6958218 6958218 + 3.15725 NA intron (NM_001113361, intron 2 of 13) intron (NM_001113361, intron 2 of 13) -30671 NM_001113363 57533 Hs.518611 NM_020773 HPRD:11623 TBC1D14 - TBC1 domain family, member 14 protein-coding Atac153_MAPQ30_peak_4693 chr3 51729266 51729266 + 3.15725 NA intron (NM_001243725, intron 3 of 4) intron (NM_001243725, intron 3 of 4) -11815 NM_001130063 2912 Hs.121510 NM_000839 HPRD:04977 GRM2 GLUR2|GPRC1B|MGLUR2|mGlu2 glutamate receptor, metabotropic 2 protein-coding Atac153_MAPQ30_peak_3875 chr2 220412930 220412930 + 3.15725 NA TTS (NR_036082) TTS (NR_036082) 939 NR_036082 100423039 NR_036082 miRBase:MI0014152 MIR3132 - microRNA 3132 ncRNA Atac153_MAPQ30_peak_2020 chr14 90642176 90642176 + 3.15725 NA intron (NM_022054, intron 1 of 1) MLT1H|LTR|ERVL-MaLR -80718 NM_002802 5700 Hs.356654 NM_002802 HPRD:04084 PSMC1 P26S4|S4|p56 proteasome (prosome, macropain) 26S subunit, ATPase, 1 protein-coding Atac153_MAPQ30_peak_6890 chrX 3155748 3155748 + 3.15725 NA Intergenic MLT1B|LTR|ERVL-MaLR -34113 NR_038428 100129464 Hs.187816 NR_038428 ENSG00000228459 CXorf28 - chromosome X open reading frame 28 ncRNA Atac153_MAPQ30_peak_1164 chr11 45016874 45016874 + 3.15725 NA Intergenic L2|LINE|L2 21421 NR_026681 221122 Hs.551656 NR_026681 ENSG00000254654 LOC221122 - uncharacterized LOC221122 ncRNA Atac153_MAPQ30_peak_7246 chrX 141062294 141062294 + 3.15725 NA Intergenic L2a|LINE|L2 70652 NM_005462 9947 Hs.132194 NM_005462 HPRD:02201 MAGEC1 CT7|CT7.1 melanoma antigen family C, 1 protein-coding Atac153_MAPQ30_peak_366 chr1 145045166 145045166 + 3.15725 NA intron (NM_022359, intron 1 of 6) MLT1H1|LTR|ERVL-MaLR -5171 NM_001198832 9659 Hs.584841 NM_014644 HPRD:10482 PDE4DIP CMYA2|MMGL phosphodiesterase 4D interacting protein protein-coding Atac153_MAPQ30_peak_3762 chr2 137263027 137263027 + 3.15725 NA Intergenic Intergenic -387302 NM_003467 7852 Hs.593413 NM_003467 HPRD:01217 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM chemokine (C-X-C motif) receptor 4 protein-coding Atac153_MAPQ30_peak_5798 chr6 138563693 138563693 + 3.15725 NA intron (NM_020340, intron 6 of 33) intron (NM_020340, intron 6 of 33) -24066 NM_021635 59351 Hs.302016 NM_021635 HPRD:16137 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding Atac153_MAPQ30_peak_5867 chr6 169431348 169431348 + 3.15725 NA Intergenic Intergenic 222861 NM_003247 7058 Hs.371147 NM_003247 HPRD:01766 THBS2 TSP2 thrombospondin 2 protein-coding Atac153_MAPQ30_peak_6463 chr8 121357358 121357358 + 3.15725 NA intron (NM_021110, intron 44 of 47) intron (NM_021110, intron 44 of 47) -100280 NM_022045 27085 Hs.657656 NM_022045 HPRD:12068 MTBP MDM2BP MDM2 binding protein protein-coding Atac153_MAPQ30_peak_1255 chr11 71163679 71163679 + 3.15725 NA promoter-TSS (NM_018161) promoter-TSS (NM_018161) -538 NM_018161 55191 Hs.556986 NM_018161 HPRD:16309 NADSYN1 - NAD synthetase 1 protein-coding Atac153_MAPQ30_peak_4448 chr22 39761748 39761748 + 3.15725 NA intron (NM_145738, intron 1 of 3) intron (NM_145738, intron 1 of 3) 1573 NM_145738 9145 Hs.216226 NM_004711 HPRD:06800 SYNGR1 - synaptogyrin 1 protein-coding Atac153_MAPQ30_peak_4568 chr3 12712643 12712643 + 3.15725 NA Intergenic L2b|LINE|L2 -6943 NM_002880 5894 Hs.159130 NM_002880 HPRD:01265 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding Atac153_MAPQ30_peak_3239 chr19 16268642 16268642 + 3.15725 NA non-coding (NR_111903, exon 8 of 8) non-coding (NR_111903, exon 8 of 8) 15694 NM_054113 117286 Hs.255432 NM_054113 HPRD:16713 CIB3 KIP3 calcium and integrin binding family member 3 protein-coding Atac153_MAPQ30_peak_6113 chr7 119016125 119016125 + 3.15725 NA Intergenic MLT2B4|LTR|ERVL -897597 NM_012281 3751 Hs.654739 NM_012281 HPRD:09254 KCND2 KV4.2|RK5 potassium voltage-gated channel, Shal-related subfamily, member 2 protein-coding Atac153_MAPQ30_peak_4625 chr3 37572874 37572874 + 3.15725 NA intron (NM_002207, intron 13 of 27) intron (NM_002207, intron 13 of 27) 79061 NM_002207 3680 Hs.113157 NM_002207 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin, alpha 9 protein-coding Atac153_MAPQ30_peak_3495 chr2 33306975 33306975 + 3.15725 NA intron (NM_206943, intron 3 of 33) THE1C|LTR|ERVL-MaLR -52689 NM_001166264 4052 Hs.619315 NM_000627 HPRD:01039 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding Atac153_MAPQ30_peak_2812 chr17 37565084 37565084 + 3.15725 NA exon (NM_004774, exon 17 of 17) exon (NM_004774, exon 17 of 17) -7175 NM_032875 84961 Hs.462946 NM_032875 HPRD:10951 FBXL20 Fbl2|Fbl20 F-box and leucine-rich repeat protein 20 protein-coding Atac153_MAPQ30_peak_1249 chr11 70426484 70426484 + 3.15725 NA intron (NR_110766, intron 2 of 8) intron (NR_110766, intron 2 of 8) -50715 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6375 chr8 49233158 49233158 + 3.15725 NA Intergenic L2a|LINE|L2 -230969 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA Atac153_MAPQ30_peak_4819 chr3 126570354 126570354 + 3.15725 NA intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) -137083 NM_032242 5361 Hs.432329 NM_032242 HPRD:11868 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding Atac153_MAPQ30_peak_4010 chr20 17454740 17454740 + 3.15725 NA intron (NM_002594, intron 11 of 11) intron (NM_002594, intron 11 of 11) 57274 NM_001195 631 Hs.129702 NM_001195 HPRD:04494 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1, filensin protein-coding Atac153_MAPQ30_peak_5890 chr7 2092945 2092945 + 3.15725 NA intron (NM_001013836, intron 12 of 18) intron (NM_001013836, intron 12 of 18) 179638 NM_003550 8379 Hs.654838 NM_003550 HPRD:04065 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 MAD1 mitotic arrest deficient-like 1 (yeast) protein-coding Atac153_MAPQ30_peak_2224 chr15 70427055 70427055 + 3.15725 NA Intergenic Intergenic -36799 NM_001105192 7090 Hs.287362 NM_005078 HPRD:02558 TLE3 ESG|ESG3|GRG3|HsT18976 transducin-like enhancer of split 3 protein-coding Atac153_MAPQ30_peak_3723 chr2 129379931 129379931 + 3.15725 NA Intergenic MLT1G3|LTR|ERVL-MaLR -242243 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA Atac153_MAPQ30_peak_2077 chr14 102663364 102663364 + 3.15725 NA intron (NR_038354, intron 3 of 3) intron (NR_038354, intron 3 of 3) 43594 NR_073542 5891 Hs.104119 NM_014226 HPRD:09310 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding Atac153_MAPQ30_peak_3304 chr19 41260825 41260825 + 3.15725 NA intron (NM_004596, intron 1 of 5) intron (NM_004596, intron 1 of 5) 4066 NM_004596 6626 Hs.466775 NM_004596 HPRD:01658 SNRPA Mud1|U1-A|U1A small nuclear ribonucleoprotein polypeptide A protein-coding Atac153_MAPQ30_peak_5002 chr4 7376660 7376660 + 3.15725 NA intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 60040 NM_001085382 768239 Hs.662523 NM_001085382 ENSG00000178597 PSAPL1 - prosaposin-like 1 (gene/pseudogene) protein-coding Atac153_MAPQ30_peak_3526 chr2 47026427 47026427 + 3.15725 NA Intergenic (AGCTG)n|Simple_repeat|Simple_repeat -17380 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA Atac153_MAPQ30_peak_5156 chr4 143414625 143414625 + 3.15725 NA intron (NM_003866, intron 2 of 26) THE1C-int|LTR|ERVL-MaLR 352979 NM_003866 8821 Hs.531403 NM_003866 HPRD:06322 INPP4B - inositol polyphosphate-4-phosphatase, type II, 105kDa protein-coding Atac153_MAPQ30_peak_5323 chr5 66471792 66471792 + 3.15725 NA Intergenic Intergenic 20825 NM_005582 4064 Hs.87205 NM_005582 HPRD:03749 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding Atac153_MAPQ30_peak_3395 chr2 6633339 6633339 + 3.15725 NA Intergenic L1PBa|LINE|L1 -117785 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA Atac153_MAPQ30_peak_2517 chr16 56382697 56382697 + 3.15725 NA TTS (NM_138736) TTS (NM_138736) 76753 NM_001144 267 Hs.295137 NM_001144 HPRD:09130 AMFR GP78|RNF45 autocrine motility factor receptor, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_1214 chr11 63963441 63963441 + 3.15725 NA intron (NM_001282652, intron 5 of 13) FLAM_C|SINE|Alu 9854 NM_001282653 10963 Hs.337295 NM_006819 HPRD:05454 STIP1 HEL-S-94n|HOP|IEF-SSP-3521|P60|STI1|STI1L stress-induced phosphoprotein 1 protein-coding Atac153_MAPQ30_peak_4210 chr20 61186909 61186909 + 3.15725 NA Intergenic Intergenic 24790 NR_029676 406923 NR_029676 MIR133A2 MIRN133A2 microRNA 133a-2 ncRNA Atac153_MAPQ30_peak_5500 chr5 172143884 172143884 + 3.15725 NA Intergenic Intergenic -38622 NM_001287812 101928093 Hs.646902 NM_001287812 LOC101928093 - uncharacterized LOC101928093 protein-coding Atac153_MAPQ30_peak_2104 chr15 26047946 26047946 + 3.15725 NA intron (NM_024490, intron 1 of 20) MLT1D|LTR|ERVL-MaLR 46026 NR_039865 100616474 NR_039865 MIR4715 - microRNA 4715 ncRNA Atac153_MAPQ30_peak_673 chr10 14217265 14217265 + 3.15725 NA intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) 100982 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA Atac153_MAPQ30_peak_7058 chrX 62653129 62653129 + 3.15725 NA intron (NR_015353, intron 2 of 3) LTR46-int|LTR|ERV1 -81911 NM_001012968 139886 Hs.612782 NM_001012968 HPRD:12556 SPIN4 - spindlin family, member 4 protein-coding Atac153_MAPQ30_peak_5610 chr6 20530227 20530227 + 3.15725 NA Intergenic Intergenic -4461 NM_017774 54901 Hs.657604 NM_017774 HPRD:13022 CDKAL1 - CDK5 regulatory subunit associated protein 1-like 1 protein-coding Atac153_MAPQ30_peak_6244 chr8 1487957 1487957 + 3.15725 NA intron (NM_001277161, intron 1 of 10) intron (NM_001277161, intron 1 of 10) 38425 NM_004745 9228 Hs.113287 NM_004745 HPRD:09258 DLGAP2 DAP2|SAPAP2 discs, large (Drosophila) homolog-associated protein 2 protein-coding Atac153_MAPQ30_peak_2233 chr15 72638174 72638174 + 3.15725 NA intron (NM_000520, intron 12 of 13) intron (NM_000520, intron 12 of 13) -25649 NM_052840 60677 Hs.348342 NM_052840 HPRD:10691 CELF6 BRUNOL6 CUGBP, Elav-like family member 6 protein-coding Atac153_MAPQ30_peak_1912 chr14 44340727 44340727 + 3.15725 NA Intergenic L1M1|LINE|L1 635772 NM_032135 84075 Hs.307086 NM_032135 HPRD:12638 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding Atac153_MAPQ30_peak_2525 chr16 58023426 58023426 + 3.15725 NA Intergenic Intergenic 10336 NM_020807 57567 Hs.129268 NM_020807 HPRD:18326 ZNF319 ZFP319 zinc finger protein 319 protein-coding Atac153_MAPQ30_peak_505 chr1 205404196 205404196 + 3.15725 NA non-coding (NR_103783, exon 2 of 2) non-coding (NR_103783, exon 2 of 2) -12982 NM_001199051 93273 Hs.655520 NM_001001552 HPRD:13983 LEMD1 CT50|LEMP-1 LEM domain containing 1 protein-coding Atac153_MAPQ30_peak_6944 chrX 20749578 20749578 + 3.15725 NA Intergenic Intergenic -464828 NM_004586 6197 Hs.445387 NM_004586 HPRD:02092 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase, 90kDa, polypeptide 3 protein-coding Atac153_MAPQ30_peak_4082 chr20 34988649 34988649 + 3.15725 NA intron (NM_014902, intron 1 of 12) MIR|SINE|MIR 94404 NM_014902 22839 Hs.249600 NM_014902 HPRD:16826 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 discs, large (Drosophila) homolog-associated protein 4 protein-coding Atac153_MAPQ30_peak_6759 chr9 116451290 116451290 + 3.15725 NA Intergenic MIRb|SINE|MIR 94856 NM_001276262 5998 Hs.494875 NM_017790 HPRD:03720 RGS3 C2PA|RGP3 regulator of G-protein signaling 3 protein-coding Atac153_MAPQ30_peak_1597 chr12 101885078 101885078 + 3.15725 NA Intergenic Intergenic 13743 NM_152323 121599 Hs.577097 NM_152323 HPRD:15438 SPIC SPI-C Spi-C transcription factor (Spi-1/PU.1 related) protein-coding Atac153_MAPQ30_peak_1702 chr12 125386582 125386582 + 3.15725 NA Intergenic Intergenic 13005 NM_021009 7316 Hs.520348 NM_021009 HPRD:07038 UBC HMG20 ubiquitin C protein-coding Atac153_MAPQ30_peak_6504 chr8 134816261 134816261 + 3.15725 NA Intergenic L1MB2|LINE|L1 -26666 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA Atac153_MAPQ30_peak_5283 chr5 24686999 24686999 + 3.15725 NA Intergenic MER52A|LTR|ERV1 -41914 NM_006727 1008 Hs.92489 NM_006727 HPRD:05187 CDH10 - cadherin 10, type 2 (T2-cadherin) protein-coding Atac153_MAPQ30_peak_1736 chr12 131126265 131126265 + 3.15725 NA Intergenic Intergenic -123855 NM_015347 23504 Hs.657441 NM_015347 HPRD:17183 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding Atac153_MAPQ30_peak_6349 chr8 38849043 38849043 + 3.15725 NA exon (NM_031940, exon 4 of 4) exon (NM_031940, exon 4 of 4) 4998 NM_001024380 83877 Hs.7471 NM_031940 HPRD:16553 TM2D2 BLP1 TM2 domain containing 2 protein-coding Atac153_MAPQ30_peak_5254 chr5 9523844 9523844 + 3.15725 NA intron (NM_003966, intron 1 of 22) intron (NM_003966, intron 1 of 22) 12399 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 CTD-2201E9.1 - uncharacterized LOC101929338 ncRNA Atac153_MAPQ30_peak_7038 chrX 53244813 53244813 + 3.15725 NA intron (NM_001282622, intron 7 of 25) intron (NM_001282622, intron 7 of 25) 9791 NM_001282622 8242 Hs.631768 NM_004187 HPRD:02442 KDM5C DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 lysine (K)-specific demethylase 5C protein-coding Atac153_MAPQ30_peak_5677 chr6 40730913 40730913 + 3.15725 NA Intergenic Intergenic -175787 NM_020737 57497 Hs.250015 NM_020737 HPRD:17444 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding Atac153_MAPQ30_peak_735 chr10 46974086 46974086 + 3.15725 NA Intergenic Intergenic -3485 NM_181519 83849 Hs.696346 NM_031912 HPRD:12161 SYT15 CHR10SYT|sytXV synaptotagmin XV protein-coding Atac153_MAPQ30_peak_4597 chr3 24187636 24187636 + 3.15725 NA intron (NM_001128176, intron 7 of 10) intron (NM_001128176, intron 7 of 10) -5179 NR_121667 101927854 Hs.570625 NR_121667 LOC101927854 - uncharacterized LOC101927854 ncRNA Atac153_MAPQ30_peak_3250 chr19 19862916 19862916 + 3.15725 NA Intergenic Intergenic -18995 NM_021030 7561 Hs.659932 NM_021030 HPRD:01933 ZNF14 GIOT-4|KOX6 zinc finger protein 14 protein-coding Atac153_MAPQ30_peak_3261 chr19 28787899 28787899 + 3.15725 NA Intergenic L1PA16|LINE|L1 430702 NR_110759 100420587 Hs.569956 NR_110759 LOC100420587 - SHC SH2-domain binding protein 1 pseudogene pseudo Atac153_MAPQ30_peak_6163 chr7 137781145 137781145 + 3.15725 NA intron (NM_001190906, intron 3 of 7) MSTD|LTR|ERVL-MaLR 19967 NM_001190906 6718 Hs.201667 NM_005989 HPRD:07263 AKR1D1 3o5bred|CBAS2|SRD5B1 aldo-keto reductase family 1, member D1 protein-coding Atac153_MAPQ30_peak_6135 chr7 131310535 131310535 + 3.15725 NA Intergenic Intergenic -69159 NM_001018111 5420 Hs.744213 NM_005397 HPRD:04025 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin-like protein-coding Atac153_MAPQ30_peak_291 chr1 79292219 79292219 + 3.15725 NA Intergenic MLT1A|LTR|ERVL-MaLR 176742 NM_006417 10561 Hs.82316 NM_006417 HPRD:09998 IFI44 MTAP44|TLDC5|p44 interferon-induced protein 44 protein-coding Atac153_MAPQ30_peak_5377 chr5 114431025 114431025 + 3.15725 NA Intergenic Intergenic 74635 NM_001300759 55521 Hs.519514 NM_018700 HPRD:15554 TRIM36 HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding Atac153_MAPQ30_peak_7257 chrX 145662557 145662557 + 3.15725 NA Intergenic L1PBb|LINE|L1 -228745 NM_001244892 100133053 Hs.98197 NM_001244892 CXorf51B - chromosome X open reading frame 51B protein-coding Atac153_MAPQ30_peak_1452 chr12 6281669 6281669 + 3.15725 NA Intergenic Intergenic -27813 NM_001769 928 Hs.114286 NM_001769 HPRD:00880 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding Atac153_MAPQ30_peak_5755 chr6 109778295 109778295 + 3.15725 NA intron (NM_001286613, intron 1 of 24) intron (NM_001286613, intron 1 of 24) -1105 NM_001159291 64780 Hs.33476 NM_022765 HPRD:06183 MICAL1 MICAL|MICAL-1|NICAL microtubule associated monooxygenase, calponin and LIM domain containing 1 protein-coding Atac153_MAPQ30_peak_7051 chrX 58042131 58042131 + 3.15725 NA Intergenic L1PREC2|LINE|L1 -105064 NM_007156 7789 Hs.550094 NM_007156 HPRD:02210 ZXDA ZNF896 zinc finger, X-linked, duplicated A protein-coding Atac153_MAPQ30_peak_5346 chr5 79149977 79149977 + 3.15725 NA Intergenic Intergenic 137111 NM_001167741 345778 Hs.531418 NM_001010891 MTX3 - metaxin 3 protein-coding Atac153_MAPQ30_peak_1018 chr10 133058142 133058142 + 3.15725 NA intron (NM_174937, intron 4 of 11) intron (NM_174937, intron 4 of 11) 51842 NM_174937 256536 Hs.126575 NM_174937 HPRD:18170 TCERG1L - transcription elongation regulator 1-like protein-coding Atac153_MAPQ30_peak_4846 chr3 133666618 133666618 + 3.15725 NA intron (NM_005630, intron 8 of 13) intron (NM_005630, intron 8 of 13) -17962 NM_025041 80111 Hs.287691 NM_025041 HPRD:07981 C3orf36 - chromosome 3 open reading frame 36 protein-coding Atac153_MAPQ30_peak_2279 chr15 80468055 80468055 + 3.15725 NA intron (NM_000137, intron 10 of 13) MIR|SINE|MIR 22822 NM_000137 2184 Hs.73875 NM_000137 HPRD:02040 FAH - fumarylacetoacetate hydrolase (fumarylacetoacetase) protein-coding Atac153_MAPQ30_peak_2467 chr16 27973463 27973463 + 3.15725 NA intron (NM_001109763, intron 2 of 6) intron (NM_001109763, intron 2 of 6) -73985 NM_144675 146395 Hs.91910 NM_144675 HPRD:14464 GSG1L PRO19651 GSG1-like protein-coding Atac153_MAPQ30_peak_3682 chr2 119391787 119391787 + 3.15725 NA Intergenic L2b|LINE|L2 -31245 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA Atac153_MAPQ30_peak_5554 chr6 717419 717419 + 3.15725 NA Intergenic L2|LINE|L2 -24278 NM_018303 55770 Hs.484412 NM_018303 HPRD:11544 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding Atac153_MAPQ30_peak_536 chr1 219760654 219760654 + 3.15725 NA Intergenic MER115|DNA|hAT-Tip100 -285965 NR_002753 26828 NR_002753 ENSG00000199377 RNU5F-1 RNU5F|U5F RNA, U5F small nuclear 1 snRNA Atac153_MAPQ30_peak_7045 chrX 55124012 55124012 + 3.15725 NA Intergenic L2a|LINE|L2 8515 NM_207339 203569 Hs.662489 NM_207339 HPRD:17565 PAGE2 CT16.4|GAGEC2|GAGEE2|PAGE-2 P antigen family, member 2 (prostate associated) protein-coding Atac153_MAPQ30_peak_178 chr1 33615132 33615132 + 3.15725 NA intron (NM_018207, intron 4 of 4) AluJr|SINE|Alu 32539 NM_018207 55223 Hs.656006 NM_018207 HPRD:07697 TRIM62 DEAR1 tripartite motif containing 62 protein-coding Atac153_MAPQ30_peak_1502 chr12 46767722 46767722 + 3.15725 NA Intergenic Intergenic -1077 NM_018976 54407 Hs.221847 NM_018976 HPRD:05535 SLC38A2 ATA2|PRO1068|SAT2|SNAT2 solute carrier family 38, member 2 protein-coding Atac153_MAPQ30_peak_5897 chr7 2955022 2955022 + 3.15725 NA intron (NM_032415, intron 20 of 24) intron (NM_032415, intron 20 of 24) -71063 NM_001293092 2768 Hs.487341 NM_007353 HPRD:05093 GNA12 NNX3|RMP|gep guanine nucleotide binding protein (G protein) alpha 12 protein-coding Atac153_MAPQ30_peak_2971 chr17 80210590 80210590 + 3.15725 NA intron (NR_110578, intron 3 of 8) intron (NR_110578, intron 3 of 8) 16046 NR_106845 102465472 NR_106845 MIR6787 hsa-mir-6787 microRNA 6787 ncRNA Atac153_MAPQ30_peak_4422 chr22 35841812 35841812 + 3.15725 NA Intergenic Intergenic 45696 NM_006739 4174 Hs.517582 NM_006739 HPRD:04075 MCM5 CDC46|P1-CDC46 minichromosome maintenance complex component 5 protein-coding Atac153_MAPQ30_peak_234 chr1 44478027 44478027 + 3.15725 NA intron (NM_201649, intron 1 of 13) intron (NM_201649, intron 1 of 13) 4985 NM_201649 6536 Hs.442590 NM_006934 HPRD:03010 SLC6A9 GLYT1 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 protein-coding Atac153_MAPQ30_peak_4354 chr22 24057276 24057276 + 3.15725 NA non-coding (NR_024448, exon 2 of 12) non-coding (NR_024448, exon 2 of 12) 2334 NR_024448 91316 Hs.148656 NR_024448 ENSG00000228315 GUSBP11 - glucuronidase, beta pseudogene 11 pseudo Atac153_MAPQ30_peak_3373 chr2 1750985 1750985 + 3.15725 NA Intergenic Intergenic -2666 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_6525 chr8 140309502 140309502 + 3.15725 NA Intergenic LTR75|LTR|ERVL -383266 NM_152888 169044 Hs.117169 NM_152888 HPRD:09885 COL22A1 - collagen, type XXII, alpha 1 protein-coding Atac153_MAPQ30_peak_6845 chr9 137382200 137382200 + 3.15725 NA Intergenic Intergenic 83772 NM_001291921 6256 Hs.590886 NM_002957 RXRA NR2B1 retinoid X receptor, alpha protein-coding Atac153_MAPQ30_peak_5009 chr4 8017197 8017197 + 3.15725 NA intron (NM_001130088, intron 12 of 13) intron (NM_001130088, intron 12 of 13) 56546 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family, member 2 protein-coding Atac153_MAPQ30_peak_4981 chr4 3756954 3756954 + 3.15725 NA Intergenic MER72|LTR|ERV1 -11342 NM_000683 152 Hs.123022 NM_000683 HPRD:00085 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding Atac153_MAPQ30_peak_5664 chr6 39051088 39051088 + 3.15725 NA intron (NM_002062, intron 12 of 12) intron (NM_002062, intron 12 of 12) 31777 NM_018322 55776 Hs.58382 NM_018322 HPRD:12892 SAYSD1 C6orf64 SAYSVFN motif domain containing 1 protein-coding Atac153_MAPQ30_peak_4986 chr4 5438331 5438331 + 3.15725 NA intron (NM_018401, intron 6 of 11) intron (NM_018401, intron 6 of 11) -88552 NM_005750 10141 Hs.177972 NM_005750 HPRD:12826 C4orf6 aC1 chromosome 4 open reading frame 6 protein-coding Atac153_MAPQ30_peak_6559 chr8 144283816 144283816 + 3.15725 NA Intergenic ERVL-E-int|LTR|ERVL -11252 NM_178172 338328 Hs.426410 NM_178172 HPRD:17347 GPIHBP1 GPI-HBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding Atac153_MAPQ30_peak_6979 chrX 36916421 36916421 + 3.15725 NA Intergenic Intergenic -110011 NM_001013736 442444 Hs.535216 NM_001013736 HPRD:18474 FAM47C - family with sequence similarity 47, member C protein-coding Atac153_MAPQ30_peak_2616 chr16 86402548 86402548 + 3.15725 NA Intergenic MER5B|DNA|hAT-Charlie -23263 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA Atac153_MAPQ30_peak_87 chr1 15626147 15626147 + 3.15725 NA intron (NM_052929, intron 5 of 30) intron (NM_052929, intron 5 of 30) 52379 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead-associated (FHA) phosphopeptide binding domain 1 protein-coding Atac153_MAPQ30_peak_2688 chr17 7328494 7328494 + 3.15725 NA promoter-TSS (NM_175734) promoter-TSS (NM_175734) -441 NM_175734 201243 Hs.380704 NM_175734 HPRD:14128 C17orf74 - chromosome 17 open reading frame 74 protein-coding Atac153_MAPQ30_peak_6611 chr9 34250674 34250674 + 3.15725 NA non-coding (NR_033243, exon 7 of 8) non-coding (NR_033243, exon 7 of 8) 71671 NR_033243 51271 Hs.268963 NM_016525 HPRD:15597 UBAP1 NAG20|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding Atac153_MAPQ30_peak_3561 chr2 68051365 68051365 + 3.15725 NA intron (NR_110271, intron 1 of 2) intron (NR_110271, intron 1 of 2) 1329 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LOC101927701 - uncharacterized LOC101927701 ncRNA Atac153_MAPQ30_peak_5485 chr5 168565688 168565688 + 3.15725 NA intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 125010 NR_030311 693170 NR_030311 MIR585 MIRN585|hsa-mir-585 microRNA 585 ncRNA Atac153_MAPQ30_peak_2473 chr16 29990408 29990408 + 3.15725 NA intron (NM_016151, intron 6 of 15) intron (NM_016151, intron 6 of 15) 5220 NM_016151 9344 Hs.291623 NM_004783 HPRD:18147 TAOK2 MAP3K17|PSK|PSK1|PSK1-BETA|TAO1|TAO2 TAO kinase 2 protein-coding Atac153_MAPQ30_peak_6236 chr8 344582 344582 + 3.15725 NA Intergenic Intergenic -11408 NR_103537 157693 Hs.591390 NR_103537 FAM87A - family with sequence similarity 87, member A ncRNA Atac153_MAPQ30_peak_4300 chr21 43699318 43699318 + 3.15725 NA intron (NM_207628, intron 7 of 16) intron (NM_207628, intron 7 of 16) 36388 NM_003226 7033 Hs.82961 NM_003226 HPRD:02797 TFF3 ITF|P1B|TFI trefoil factor 3 (intestinal) protein-coding Atac153_MAPQ30_peak_1606 chr12 104908676 104908676 + 3.15725 NA intron (NM_018413, intron 1 of 2) MIR|SINE|MIR 57984 NM_018413 50515 Hs.17569 NM_018413 HPRD:13055 CHST11 C4ST|C4ST-1|C4ST1|HSA269537 carbohydrate (chondroitin 4) sulfotransferase 11 protein-coding Atac153_MAPQ30_peak_2781 chr17 26302116 26302116 + 3.15725 NA Intergenic Intergenic -67572 NM_016231 51701 Hs.208759 NM_016231 HPRD:17637 NLK - nemo-like kinase protein-coding Atac153_MAPQ30_peak_2962 chr17 78865386 78865386 + 3.15725 NA intron (NM_020761, intron 17 of 33) intron (NM_020761, intron 17 of 33) -85954 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA Atac153_MAPQ30_peak_1448 chr12 5573379 5573379 + 3.15725 NA intron (NM_001102654, intron 1 of 1) intron (NM_001102654, intron 1 of 1) -29919 NM_002527 4908 Hs.99171 NM_002527 HPRD:01219 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding Atac153_MAPQ30_peak_7096 chrX 71342963 71342963 + 3.15725 NA intron (NM_001013627, intron 1 of 7) L2c|LINE|L2 8788 NM_001024455 340526 Hs.512180 NM_001024455 HPRD:18594 RGAG4 6430402L03Rik|MAR5|MART5 retrotransposon gag domain containing 4 protein-coding Atac153_MAPQ30_peak_120 chr1 20133198 20133198 + 3.15725 NA Intergenic L2|LINE|L2 -6788 NM_181719 255104 Hs.656313 NM_181719 HPRD:14140 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding Atac153_MAPQ30_peak_4008 chr20 17316944 17316944 + 3.15725 NA intron (NM_002594, intron 2 of 11) intron (NM_002594, intron 2 of 11) 109347 NM_002594 5126 Hs.315186 NM_002594 HPRD:01202 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding Atac153_MAPQ30_peak_3242 chr19 16982072 16982072 + 3.15725 NA exon (NM_015260, exon 15 of 20) exon (NM_015260, exon 15 of 20) 7987 NM_001297597 23309 Hs.13999 NM_015260 HPRD:09691 SIN3B - SIN3 transcription regulator family member B protein-coding Atac153_MAPQ30_peak_2519 chr16 56892400 56892400 + 3.15725 NA promoter-TSS (NR_029680) promoter-TSS (NR_029680) -30 NR_029680 406930 NR_029680 miRBase:MI0000455 MIR138-2 MIRN138-2 microRNA 138-2 ncRNA Atac153_MAPQ30_peak_2915 chr17 70622113 70622113 + 3.15725 NA intron (NR_033876, intron 2 of 4) THE1C|LTR|ERVL-MaLR 14498 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 - long intergenic non-protein coding RNA 511 ncRNA Atac153_MAPQ30_peak_3940 chr2 239160067 239160067 + 3.15725 NA intron (NM_022817, intron 20 of 22) intron (NM_022817, intron 20 of 22) -11302 NM_001282434 55502 Hs.42949 NM_018645 HPRD:11021 HES6 C-HAIRY1|HES-6|bHLHb41|bHLHc23 hes family bHLH transcription factor 6 protein-coding Atac153_MAPQ30_peak_1873 chr13 112076070 112076070 + 3.15725 NA Intergenic Intergenic 103055 NM_152324 121793 Hs.210677 NM_152324 HPRD:14603 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding Atac153_MAPQ30_peak_3729 chr2 130326540 130326540 + 3.15725 NA Intergenic MLT1H1-int|LTR|ERVL-MaLR -295076 NR_122040 151121 Hs.531687 NM_001033657 ENSG00000204460 LOC151121 - uncharacterized LOC151121 ncRNA Atac153_MAPQ30_peak_1660 chr12 114568723 114568723 + 3.15725 NA Intergenic Intergenic -164547 NM_001146699 9904 Hs.7482 NM_016196 HPRD:15225 RBM19 - RNA binding motif protein 19 protein-coding Atac153_MAPQ30_peak_5331 chr5 72547839 72547839 + 3.15725 NA Intergenic Intergenic 78816 NM_153217 134288 Hs.508588 NM_153217 HPRD:14432 TMEM174 - transmembrane protein 174 protein-coding Atac153_MAPQ30_peak_3801 chr2 175661436 175661436 + 3.15725 NA Intergenic Intergenic -32236 NM_000079 1134 Hs.434479 NM_000079 HPRD:00007 CHRNA1 ACHRA|ACHRD|CHRNA|CMS2A|FCCMS|SCCMS cholinergic receptor, nicotinic, alpha 1 (muscle) protein-coding Atac153_MAPQ30_peak_6956 chrX 27765659 27765659 + 3.15725 NA exon (NM_001136533, exon 1 of 1) exon (NM_001136533, exon 1 of 1) 733 NM_001136533 347442 Hs.720885 NM_001136533 DCAF8L2 WDR42C DDB1 and CUL4 associated factor 8-like 2 protein-coding Atac153_MAPQ30_peak_5436 chr5 144829825 144829825 + 3.15725 NA Intergenic Intergenic 385107 NM_138492 153768 Hs.314261 NM_138492 HPRD:14479 PRELID2 - PRELI domain containing 2 protein-coding Atac153_MAPQ30_peak_401 chr1 158085566 158085566 + 3.15725 NA Intergenic Intergenic 24864 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LOC646268 - hCG1654703 ncRNA Atac153_MAPQ30_peak_2258 chr15 76490640 76490640 + 3.15725 NA intron (NM_152335, intron 9 of 10) MIRb|SINE|MIR -16813 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA Atac153_MAPQ30_peak_7043 chrX 54466756 54466756 + 3.15725 NA promoter-TSS (NM_058163) promoter-TSS (NM_058163) -97 NM_058163 90121 Hs.522662 NM_058163 HPRD:06493 TSR2 DT1P1A10|WGG1 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_1979 chr14 73176795 73176795 + 3.15725 NA intron (NM_001280543, intron 7 of 10) intron (NM_001280543, intron 7 of 10) 182562 NM_001280544 8110 Hs.162868 NM_012074 HPRD:03395 DPF3 BAF45C|CERD4 D4, zinc and double PHD fingers, family 3 protein-coding Atac153_MAPQ30_peak_2584 chr16 79100596 79100596 + 3.15725 NA intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 534026 NM_005360 4094 Hs.134859 NM_005360 HPRD:01518 MAF CCA4|c-MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog protein-coding Atac153_MAPQ30_peak_2626 chr16 87298375 87298375 + 3.15725 NA Intergenic Intergenic 27683 NR_104667 101928682 Hs.149004 NR_104667 LOC101928682 - uncharacterized LOC101928682 ncRNA Atac153_MAPQ30_peak_4856 chr3 134836960 134836960 + 3.15725 NA intron (NM_004441, intron 4 of 15) intron (NM_004441, intron 4 of 15) 322861 NM_004441 2047 Hs.116092 NM_004441 HPRD:02790 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding Atac153_MAPQ30_peak_5473 chr5 159398483 159398483 + 3.15725 NA intron (NM_000679, intron 1 of 1) MIR|SINE|MIR -37624 NM_001282500 7265 Hs.519718 NM_003314 HPRD:11881 TTC1 TPR1 tetratricopeptide repeat domain 1 protein-coding Atac153_MAPQ30_peak_1226 chr11 65396089 65396089 + 3.15725 NA exon (NM_032223, exon 23 of 35) exon (NM_032223, exon 23 of 35) -7692 NR_039839 100616292 NR_039839 MIR4690 - microRNA 4690 ncRNA Atac153_MAPQ30_peak_5918 chr7 17489576 17489576 + 3.15725 NA intron (NR_110014, intron 2 of 3) L1PREC2|LINE|L1 75035 NR_110015 102659288 Hs.559488 NR_110014 LOC102659288 - uncharacterized LOC102659288 ncRNA Atac153_MAPQ30_peak_387 chr1 156125714 156125714 + 3.15725 NA intron (NM_022367, intron 2 of 14) intron (NM_022367, intron 2 of 14) 2345 NM_001193302 64218 Hs.408846 NM_022367 HPRD:09528 SEMA4A CORD10|RP35|SEMAB|SEMB sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A protein-coding Atac153_MAPQ30_peak_743 chr10 47101631 47101631 + 3.15725 NA intron (NR_033957, intron 1 of 3) intron (NR_033957, intron 1 of 3) 14906 NM_001278795 100996758 Hs.524719 NM_001278795 LOC100996758 - neuropeptide Y receptor type 4-like protein-coding Atac153_MAPQ30_peak_2295 chr15 86607990 86607990 + 3.15725 NA Intergenic Intergenic 51958 NR_120368 101929701 Hs.132570 NR_120368 LOC101929701 - uncharacterized LOC101929701 ncRNA Atac153_MAPQ30_peak_6590 chr9 15619849 15619849 + 3.15725 NA intron (NM_173550, intron 6 of 25) Tigger1|DNA|TcMar-Tigger 66752 NM_173550 203238 Hs.17267 NM_173550 HPRD:10805 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding Atac153_MAPQ30_peak_3352 chr19 55432658 55432658 + 3.15725 NA Intergenic Intergenic 15150 NM_004829 9437 Hs.97084 NM_004829 HPRD:05167 NCR1 CD335|LY94|NK-p46|NKP46 natural cytotoxicity triggering receptor 1 protein-coding Atac153_MAPQ30_peak_2003 chr14 78783565 78783565 + 3.15725 NA intron (NR_073547, intron 4 of 20) MLT2B1|LTR|ERVL -86509 NM_004796 9369 Hs.368307 NM_004796 NRXN3 C14orf60 neurexin 3 protein-coding Atac153_MAPQ30_peak_4608 chr3 31714613 31714613 + 3.15725 NA intron (NM_017784, intron 8 of 11) intron (NM_017784, intron 8 of 11) -31092 NR_049771 100874206 Hs.662428 NR_049771 ENSG00000232490 OSBPL10-AS1 - OSBPL10 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3950 chr2 240148275 240148275 + 3.15725 NA intron (NM_006037, intron 3 of 26) intron (NM_006037, intron 3 of 26) -31122 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA Atac153_MAPQ30_peak_7151 chrX 107306253 107306253 + 3.15725 NA intron (NM_001170553, intron 3 of 7) intron (NM_001170553, intron 3 of 7) 18053 NM_001170553 340547 Hs.177164 NM_182607 HPRD:06655 VSIG1 1700062D20Rik|GPA34|dJ889N15.1 V-set and immunoglobulin domain containing 1 protein-coding Atac153_MAPQ30_peak_1728 chr12 130297375 130297375 + 3.15725 NA intron (NM_133448, intron 1 of 8) L2|LINE|L2 90837 NM_133448 121256 Hs.507268 NM_133448 HPRD:13906 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding Atac153_MAPQ30_peak_1839 chr13 93894482 93894482 + 3.15725 NA intron (NM_005708, intron 1 of 8) L1PB3|LINE|L1 15404 NM_005708 10082 Hs.444329 NM_005708 HPRD:05099 GPC6 OMIMD1 glypican 6 protein-coding Atac153_MAPQ30_peak_4051 chr20 25044399 25044399 + 3.15725 NA Intergenic Intergenic -5581 NM_001252677 84532 Hs.529353 NM_032501 HPRD:12413 ACSS1 ACAS2L|ACECS1|AceCS2L acyl-CoA synthetase short-chain family member 1 protein-coding Atac153_MAPQ30_peak_4490 chr22 46967902 46967902 + 3.15725 NA Intergenic Intergenic -34835 NM_014246 9620 Hs.252387 NM_014246 HPRD:05160 CELSR1 CDHF9|FMI2|HFMI2|ME2 cadherin, EGF LAG seven-pass G-type receptor 1 protein-coding Atac153_MAPQ30_peak_286 chr1 68235753 68235753 + 3.15725 NA intron (NM_018841, intron 2 of 3) LTR78|LTR|ERV1 -62218 NR_040077 100289178 Hs.677603 NR_040077 ENSG00000232284 GNG12-AS1 - GNG12 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6997 chrX 40317287 40317287 + 3.15725 NA Intergenic MLT1G3|LTR|ERVL-MaLR -122929 NM_005765 10159 Hs.495960 NM_005765 HPRD:06454 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase, H+ transporting, lysosomal accessory protein 2 protein-coding Atac153_MAPQ30_peak_5922 chr7 22898601 22898601 + 3.15725 NA Intergenic Intergenic 2369 NR_003075 692210 NR_003075 ENSG00000221740 SNORD93 HBII-336 small nucleolar RNA, C/D box 93 snoRNA Atac153_MAPQ30_peak_5117 chr4 87464150 87464150 + 3.15725 NA Intergenic Intergenic -51318 NM_080684 5783 Hs.436142 NM_006264 HPRD:02602 PTPN13 FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) protein-coding Atac153_MAPQ30_peak_3862 chr2 217425351 217425351 + 3.15725 NA Intergenic Intergenic 46310 NR_110392 101928232 Hs.694592 NR_110392 ENSG00000224391 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA Atac153_MAPQ30_peak_1202 chr11 60836152 60836152 + 3.15725 NA Intergenic L2a|LINE|L2 -33778 NM_014207 921 Hs.58685 NM_014207 HPRD:01078 CD5 LEU1|T1 CD5 molecule protein-coding Atac153_MAPQ30_peak_565 chr1 228608032 228608032 + 3.15725 NA Intergenic MLT1A0|LTR|ERVL-MaLR -3449 NM_001134855 51127 Hs.121748 NM_016102 HPRD:05839 TRIM17 RBCC|RNF16|terf tripartite motif containing 17 protein-coding Atac153_MAPQ30_peak_108 chr1 18246530 18246530 + 3.15725 NA Intergenic Intergenic 164722 NM_030812 81569 Hs.2149 NM_030812 HPRD:11274 ACTL8 CT57 actin-like 8 protein-coding Atac153_MAPQ30_peak_4655 chr3 44713519 44713519 + 3.15725 NA Intergenic Intergenic 23286 NM_003420 7584 Hs.288658 NM_003420 HPRD:01920 ZNF35 HF.10|HF10|Zfp105 zinc finger protein 35 protein-coding Atac153_MAPQ30_peak_1435 chr12 3403987 3403987 + 3.15725 NA Intergenic Intergenic -86528 NM_001256536 56341 Hs.504530 NM_019854 HPRD:11029 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding Atac153_MAPQ30_peak_2004 chr14 79510155 79510155 + 3.15725 NA intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -235527 NM_138970 9369 Hs.368307 NM_004796 NRXN3 C14orf60 neurexin 3 protein-coding Atac153_MAPQ30_peak_3572 chr2 71187278 71187278 + 3.15725 NA intron (NM_001692, intron 6 of 13) intron (NM_001692, intron 6 of 13) -11537 NR_110273 101927750 Hs.676120 NR_110273 ENSG00000239322 ATP6V1B1-AS1 - ATP6V1B1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_130 chr1 21798267 21798267 + 3.15725 NA exon (NM_032264, exon 5 of 15) exon (NM_032264, exon 5 of 15) 31684 NM_001256416 84224 Hs.325422 NM_032264 HPRD:10633 NBPF3 AE2 neuroblastoma breakpoint family, member 3 protein-coding Atac153_MAPQ30_peak_1788 chr13 31759053 31759053 + 3.15725 NA Intergenic Intergenic -15059 NM_194318 145173 Hs.13205 NM_194318 HPRD:12513 B3GALTL B3GLCT|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 1,3-galactosyltransferase-like protein-coding Atac153_MAPQ30_peak_6256 chr8 2505274 2505274 + 3.15725 NA intron (NR_125425, intron 2 of 5) intron (NR_125425, intron 2 of 5) -24821 NR_125423 101927815 Hs.571467 NR_125423 ENSG00000249694 LOC101927815 - uncharacterized LOC101927815 ncRNA Atac153_MAPQ30_peak_1033 chr10 135073437 135073437 + 3.15725 NA Intergenic Intergenic -12048 NR_108079 101927671 Hs.741766 NR_108078 ENSG00000166917 MIR202HG - MIR202 host gene (non-protein coding) ncRNA Atac153_MAPQ30_peak_1001 chr10 131647786 131647786 + 3.15725 NA intron (NM_001005463, intron 10 of 15) intron (NM_001005463, intron 10 of 15) -6148 NR_036179 100422873 NR_036179 MIR4297 - microRNA 4297 ncRNA Atac153_MAPQ30_peak_3066 chr18 42541213 42541213 + 3.15725 NA intron (NM_015559, intron 4 of 5) intron (NM_015559, intron 4 of 5) 8918 NR_036203 100422829 NR_036203 miRBase:MI0015848 MIR4319 - microRNA 4319 ncRNA Atac153_MAPQ30_peak_7203 chrX 127109290 127109290 + 3.15725 NA Intergenic LTR57-int|LTR|ERVL 77092 NM_138289 139741 Hs.680125 NM_138289 HPRD:06439 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin-related protein T1 protein-coding Atac153_MAPQ30_peak_3641 chr2 101374673 101374673 + 3.15725 NA Intergenic Intergenic -61940 NM_002518 4862 Hs.156832 NM_002518 HPRD:09137 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding Atac153_MAPQ30_peak_5887 chr7 1745436 1745436 + 3.15725 NA Intergenic Intergenic -3362 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine-rich repeat and fibronectin type III domain containing 1 protein-coding Atac153_MAPQ30_peak_2823 chr17 40999245 40999245 + 3.15725 NA intron (NM_001158, intron 1 of 3) intron (NM_001158, intron 1 of 3) 2636 NM_009590 314 Hs.143102 NM_001158 HPRD:11889 AOC2 DAO2|RAO amine oxidase, copper containing 2 (retina-specific) protein-coding Atac153_MAPQ30_peak_4959 chr4 1303953 1303953 + 3.15725 NA intron (NM_001297433, intron 1 of 8) intron (NM_001297433, intron 1 of 8) 374 NM_001297433 10296 Hs.139896 NM_005882 HPRD:08427 MAEA EMLP|EMP|GID9|HLC-10|PIG5 macrophage erythroblast attacher protein-coding Atac153_MAPQ30_peak_1534 chr12 56110630 56110630 + 3.15725 NA intron (NR_037657, intron 1 of 2) intron (NR_037657, intron 1 of 2) 554 NR_037656 2647 Hs.94672 NM_001487 HPRD:03263 BLOC1S1 BLOS1|GCN5L1|MICoA|RT14 biogenesis of lysosomal organelles complex-1, subunit 1 protein-coding Atac153_MAPQ30_peak_7060 chrX 63427677 63427677 + 3.15725 NA Intergenic Intergenic -2053 NM_152424 139285 Hs.314225 NM_152424 HPRD:06565 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding Atac153_MAPQ30_peak_3924 chr2 237204436 237204436 + 3.15725 NA Intergenic L1MB3|LINE|L1 -31448 NM_212556 401036 Hs.639909 NM_212556 HPRD:16514 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding Atac153_MAPQ30_peak_1659 chr12 114560855 114560855 + 3.15725 NA Intergenic Intergenic -156679 NM_001146699 9904 Hs.7482 NM_016196 HPRD:15225 RBM19 - RNA binding motif protein 19 protein-coding Atac153_MAPQ30_peak_352 chr1 117827085 117827085 + 3.15725 NA Intergenic Intergenic -73503 NR_045604 79679 Hs.546434 NM_024626 HPRD:06429 VTCN1 B7-H4|B7H4|B7S1|B7X|B7h.5|PRO1291|VCTN1 V-set domain containing T cell activation inhibitor 1 protein-coding Atac153_MAPQ30_peak_4315 chr21 45373006 45373006 + 3.15725 NA intron (NM_001037553, intron 1 of 8) L1MC4|LINE|L1 27727 NM_001037553 56894 Hs.248785 NM_020132 HPRD:10637 AGPAT3 LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding Atac153_MAPQ30_peak_4929 chr3 183946084 183946084 + 3.15725 NA Intergenic Intergenic -2233 NM_138345 90113 Hs.584997 NM_138345 ENSG00000145198 VWA5B2 - von Willebrand factor A domain containing 5B2 protein-coding Atac153_MAPQ30_peak_240 chr1 45172637 45172637 + 3.15725 NA intron (NM_001145636, intron 6 of 11) intron (NM_001145636, intron 6 of 11) 32243 NM_001145636 339541 Hs.173679 NM_001004307 HPRD:17525 C1orf228 NCRNA00082|p40 chromosome 1 open reading frame 228 protein-coding Atac153_MAPQ30_peak_3162 chr18 75889973 75889973 + 3.15725 NA Intergenic Intergenic -184290 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA Atac153_MAPQ30_peak_2061 chr14 100115737 100115737 + 3.15725 NA intron (NM_001127258, intron 1 of 8) MIRc|SINE|MIR 4257 NM_001127258 84439 Hs.288522 NM_032425 HPRD:13895 HHIPL1 KIAA1822|UNQ9245 HHIP-like 1 protein-coding Atac153_MAPQ30_peak_2735 chr17 17970388 17970388 + 3.15725 NA 3' UTR (NM_024052, exon 6 of 6) 3' UTR (NM_024052, exon 6 of 6) -20793 NM_001388 1819 Hs.78582 NM_001388 HPRD:04286 DRG2 - developmentally regulated GTP binding protein 2 protein-coding Atac153_MAPQ30_peak_6886 chrX 2181261 2181261 + 3.15725 NA intron (NM_145177, intron 5 of 6) MLT1A0|LTR|ERVL-MaLR 237319 NM_001171135 9189 Hs.131452 NM_004729 HPRD:02170 ZBED1 ALTE|DREF|TRAMP|hDREF zinc finger, BED-type containing 1 protein-coding Atac153_MAPQ30_peak_6576 chr9 3211825 3211825 + 3.15725 NA Intergenic Intergenic 30236 NR_121585 101929247 Hs.547178 NR_121585 LINC01231 - long intergenic non-protein coding RNA 1231 ncRNA Atac153_MAPQ30_peak_6659 chr9 84203720 84203720 + 3.15725 NA intron (NM_005077, intron 16 of 19) intron (NM_005077, intron 16 of 19) 99876 NM_005077 7088 Hs.197320 NM_005077 HPRD:02557 TLE1 ESG|ESG1|GRG1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) protein-coding Atac153_MAPQ30_peak_5392 chr5 131415888 131415888 + 3.15725 NA Intergenic Intergenic 6403 NM_000758 1437 Hs.1349 NM_000758 HPRD:00734 CSF2 GMCSF colony stimulating factor 2 (granulocyte-macrophage) protein-coding Atac153_MAPQ30_peak_1076 chr11 9089929 9089929 + 3.15725 NA intron (NM_001170690, intron 5 of 17) intron (NM_001170690, intron 5 of 17) 21997 NR_049874 100847015 NR_049874 MIR5691 - microRNA 5691 ncRNA Atac153_MAPQ30_peak_2261 chr15 77281760 77281760 + 3.15725 NA Intergenic Intergenic -5705 NM_003978 9051 Hs.129758 NM_003978 HPRD:05891 PSTPIP1 CD2BP1|CD2BP1L|CD2BP1S|H-PIP|PAPAS|PSTPIP proline-serine-threonine phosphatase interacting protein 1 protein-coding Atac153_MAPQ30_peak_4542 chr3 8668254 8668254 + 3.15725 NA intron (NM_001256748, intron 8 of 11) MLT1K|LTR|ERVL-MaLR 18230 NR_046358 51066 Hs.736935 NM_015931 HPRD:11267 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog (C. elegans) protein-coding Atac153_MAPQ30_peak_4003 chr20 15150902 15150902 + 3.15725 NA intron (NM_080676, intron 5 of 16) LTR33C|LTR|ERVL -26602 NM_001033087 140733 Hs.661576 NM_080676 HPRD:16640 MACROD2 C20orf133 MACRO domain containing 2 protein-coding Atac153_MAPQ30_peak_6707 chr9 96659769 96659769 + 3.15725 NA Intergenic Intergenic 57839 NM_021570 56033 Hs.164960 NM_021570 HPRD:16017 BARX1 - BARX homeobox 1 protein-coding Atac153_MAPQ30_peak_4431 chr22 36748722 36748722 + 3.15725 NA intron (NM_002473, intron 1 of 40) intron (NM_002473, intron 1 of 40) 35341 NM_002473 4627 Hs.474751 NM_002473 HPRD:01177 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin, heavy chain 9, non-muscle protein-coding Atac153_MAPQ30_peak_274 chr1 56171029 56171029 + 3.15725 NA Intergenic Intergenic 479715 NR_039618 100616272 NR_039618 miRBase:MI0016759 MIR4422 - microRNA 4422 ncRNA Atac153_MAPQ30_peak_4713 chr3 54528362 54528362 + 3.15725 NA intron (NM_018398, intron 4 of 37) intron (NM_018398, intron 4 of 37) 145522 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related (non-protein coding) ncRNA Atac153_MAPQ30_peak_4152 chr20 49574962 49574962 + 3.15725 NA promoter-TSS (NM_003859) promoter-TSS (NM_003859) 98 NM_003859 8813 Hs.654951 NM_003859 HPRD:04613 DPM1 CDGIE|MPDS dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit protein-coding Atac153_MAPQ30_peak_4811 chr3 124520933 124520933 + 3.15725 NA intron (NM_002213, intron 9 of 14) L2c|LINE|L2 71720 NR_033434 7372 Hs.2057 NM_000373 UMPS OPRT uridine monophosphate synthetase protein-coding Atac153_MAPQ30_peak_3226 chr19 13142208 13142208 + 3.15725 NA intron (NM_001271043, intron 2 of 10) L3b|LINE|CR1 6813 NM_001271043 4784 Hs.257970 NM_002501 HPRD:01234 NFIX MRSHSS|NF1A|SOTOS2 nuclear factor I/X (CCAAT-binding transcription factor) protein-coding Atac153_MAPQ30_peak_3596 chr2 86228294 86228294 + 3.15725 NA Intergenic Intergenic 22697 NR_026984 90784 Hs.594051 NR_026984 LOC90784 - uncharacterized LOC90784 ncRNA Atac153_MAPQ30_peak_4035 chr20 23230292 23230292 + 3.15725 NA Intergenic Intergenic -101081 NM_013248 29107 Hs.516933 NM_013248 HPRD:16159 NXT1 MTR2|P15 nuclear transport factor 2-like export factor 1 protein-coding Atac153_MAPQ30_peak_7199 chrX 124679184 124679184 + 3.15725 NA Intergenic L1PBa|LINE|L1 225215 NM_001195272 100129520 Hs.728728 NM_001195272 LOC100129520 - testis expressed sequence 13-like protein-coding Atac153_MAPQ30_peak_6719 chr9 98344583 98344583 + 3.15725 NA Intergenic Intergenic -65336 NM_001083603 5727 Hs.494538 NM_000264 HPRD:03200 PTCH1 BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11 patched 1 protein-coding Atac153_MAPQ30_peak_3076 chr18 44109180 44109180 + 3.15725 NA exon (NM_001145472, exon 11 of 24) exon (NM_001145472, exon 11 of 24) -10131 NM_001145473 125336 Hs.345877 NM_144612 HPRD:08316 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding Atac153_MAPQ30_peak_6970 chrX 33234433 33234433 + 3.15725 NA intron (NM_000109, intron 1 of 78) L1PA16|LINE|L1 -4760 NM_004006 1756 Hs.495912 NM_000109 HPRD:02303 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding Atac153_MAPQ30_peak_3325 chr19 47233806 47233806 + 3.15725 NA intron (NM_013403, intron 6 of 17) intron (NM_013403, intron 6 of 17) -13422 NM_001079881 25865 Hs.466987 NM_016457 HPRD:09523 PRKD2 PKD2|nPKC-D2 protein kinase D2 protein-coding Atac153_MAPQ30_peak_2346 chr15 101975181 101975181 + 3.15725 NA intron (NM_138319, intron 2 of 20) intron (NM_138319, intron 2 of 20) 55006 NM_138323 5046 Hs.498494 NM_002570 HPRD:01329 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding Atac153_MAPQ30_peak_1267 chr11 74396656 74396656 + 3.15725 NA Intergenic Intergenic 34726 NR_039845 100616402 NR_039845 MIR4696 - microRNA 4696 ncRNA Atac153_MAPQ30_peak_4164 chr20 52564350 52564350 + 3.15725 NA intron (NM_003657, intron 11 of 11) intron (NM_003657, intron 11 of 11) -72102 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo Atac153_MAPQ30_peak_5414 chr5 134660810 134660810 + 3.15725 NA intron (NM_001277348, intron 3 of 5) intron (NM_001277348, intron 3 of 5) 74118 NM_138610 9555 Hs.420272 NM_004893 HPRD:13624 H2AFY H2A.y|H2A/y|H2AF12M|H2AFJ|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family, member Y protein-coding Atac153_MAPQ30_peak_4243 chr21 32626036 32626036 + 3.15725 NA intron (NM_003253, intron 5 of 28) intron (NM_003253, intron 5 of 28) -215241 NM_001099219 728299 Hs.580875 NM_001099219 ENSG00000206102 KRTAP19-8 - keratin associated protein 19-8 protein-coding Atac153_MAPQ30_peak_2403 chr16 12435378 12435378 + 3.15725 NA intron (NM_032167, intron 15 of 20) MLT1J2|LTR|ERVL-MaLR 364776 NM_032167 92017 Hs.458401 NM_032167 HPRD:17437 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding Atac153_MAPQ30_peak_1897 chr14 23746520 23746520 + 3.15725 NA intron (NM_020834, intron 1 of 1) MIRc|SINE|MIR 8789 NM_020834 57594 Hs.632332 NM_020834 HPRD:12167 HOMEZ KIAA1443 homeobox and leucine zipper encoding protein-coding Atac153_MAPQ30_peak_6816 chr9 131337034 131337034 + 3.15725 NA exon (NM_001130438, exon 4 of 57) exon (NM_001130438, exon 4 of 57) 22197 NM_003127 6709 Hs.372331 NM_003127 HPRD:01684 SPTAN1 EIEE5|NEAS|SPTA2 spectrin, alpha, non-erythrocytic 1 protein-coding Atac153_MAPQ30_peak_1531 chr12 54261769 54261769 + 3.15725 NA Intergenic Intergenic -70807 NM_017410 3229 Hs.118608 NM_017410 HPRD:00862 HOXC13 ECTD9|HOX3|HOX3G homeobox C13 protein-coding Atac153_MAPQ30_peak_1454 chr12 6872907 6872907 + 3.15725 NA Intergenic Intergenic -2634 NM_002824 5763 Hs.504613 NM_002824 HPRD:01344 PTMS ParaT parathymosin protein-coding Atac153_MAPQ30_peak_3581 chr2 74906826 74906826 + 3.15725 NA exon (NM_004263, exon 14 of 14) exon (NM_004263, exon 14 of 14) 25471 NR_073398 10505 Hs.25887 NM_004263 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F protein-coding Atac153_MAPQ30_peak_2215 chr15 68211092 68211092 + 3.15725 NA Intergenic LTR28|LTR|ERV1 -78709 NR_125730 103625684 NR_125730 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA Atac153_MAPQ30_peak_5513 chr5 175236972 175236972 + 3.15725 NA intron (NM_006650, intron 2 of 4) intron (NM_006650, intron 2 of 4) 13362 NM_006650 10814 Hs.193235 NM_006650 HPRD:09234 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding Atac153_MAPQ30_peak_6398 chr8 65749643 65749643 + 3.15725 NA Intergenic L1MD1|LINE|L1 -38295 NM_004820 9420 Hs.667720 NM_004820 HPRD:04753 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450, family 7, subfamily B, polypeptide 1 protein-coding Atac153_MAPQ30_peak_2554 chr16 69887933 69887933 + 3.15725 NA intron (NM_001270454, intron 6 of 23) intron (NM_001270454, intron 6 of 23) 15293 NM_001270453 11060 Hs.408458 NM_007014 HPRD:03812 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding Atac153_MAPQ30_peak_3804 chr2 176474655 176474655 + 3.15725 NA Intergenic Intergenic 392363 NM_030650 80856 Hs.209561 NM_030650 KIAA1715 LNP|LNP1|Ul|ulnaless KIAA1715 protein-coding Atac153_MAPQ30_peak_5260 chr5 10701255 10701255 + 3.15725 NA intron (NM_004394, intron 2 of 3) intron (NM_004394, intron 2 of 3) 60132 NM_004394 1611 Hs.75189 NM_004394 HPRD:02977 DAP - death-associated protein protein-coding Atac153_MAPQ30_peak_3768 chr2 148140478 148140478 + 3.15725 NA Intergenic Intergenic -461608 NM_001278580 92 Hs.470174 NM_001616 HPRD:00025 ACVR2A ACTRII|ACVR2 activin A receptor, type IIA protein-coding Atac153_MAPQ30_peak_1010 chr10 132732229 132732229 + 3.15725 NA Intergenic MLT1J2|LTR|ERVL-MaLR 28702 NR_036180 100422867 NR_036180 miRBase:MI0015825 MIR378C - microRNA 378c ncRNA Atac153_MAPQ30_peak_7071 chrX 66052342 66052342 + 3.15725 NA Intergenic L1M1|LINE|L1 -193202 NM_001199687 60401 Hs.302017 NM_021783 HPRD:02230 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding Atac153_MAPQ30_peak_5549 chr6 223767 223767 + 3.15725 NA Intergenic Tigger3c|DNA|TcMar-Tigger -68290 NR_104475 56940 Hs.29106 NM_020185 HPRD:13255 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding Atac153_MAPQ30_peak_5511 chr5 175111576 175111576 + 3.15725 NA TTS (NM_022304) TTS (NM_022304) 3112 NM_022304 3274 Hs.247885 NM_022304 HPRD:00816 HRH2 H2R histamine receptor H2 protein-coding Atac153_MAPQ30_peak_1513 chr12 49974104 49974104 + 3.15725 NA Intergenic Intergenic -12176 NM_006337 10445 Hs.25313 NM_006337 HPRD:11298 MCRS1 ICP22BP|INO80Q|MCRS2|MSP58|P78 microspherule protein 1 protein-coding Atac153_MAPQ30_peak_2281 chr15 80753441 80753441 + 3.15725 NA intron (NM_014862, intron 3 of 18) intron (NM_014862, intron 3 of 18) 56749 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl-hydrocarbon receptor nuclear translocator 2 protein-coding Atac153_MAPQ30_peak_7098 chrX 71360724 71360724 + 3.15725 NA intron (NM_001013627, intron 6 of 7) intron (NM_001013627, intron 6 of 7) -3310 NM_207422 392490 Hs.660859 NM_207422 FLJ44635 - TPT1-like protein protein-coding Atac153_MAPQ30_peak_5191 chr4 178321193 178321193 + 3.15725 NA Intergenic L2a|LINE|L2 42464 NM_001171988 175 Hs.207776 NM_000027 HPRD:01949 AGA AGU|ASRG|GA aspartylglucosaminidase protein-coding Atac153_MAPQ30_peak_616 chr1 244924070 244924070 + 3.15725 NA Intergenic MIRb|SINE|MIR -74569 NM_198076 116228 Hs.411490 NM_198076 HPRD:13307 COX20 FAM36A COX20 cytochrome C oxidase assembly factor protein-coding Atac153_MAPQ30_peak_1773 chr13 26298019 26298019 + 3.15725 NA intron (NM_016529, intron 25 of 36) MLT1E3|LTR|ERVL-MaLR 327179 NM_001007538 387914 Hs.433791 NM_001007538 HPRD:16589 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding Atac153_MAPQ30_peak_2408 chr16 12795520 12795520 + 3.15725 NA intron (NM_001099455, intron 2 of 2) intron (NM_001099455, intron 2 of 2) -18658 NR_039869 100616195 NR_039869 miRBase:MI0017353 MIR4718 - microRNA 4718 ncRNA Atac153_MAPQ30_peak_2853 chr17 47523876 47523876 + 3.15725 NA Intergenic MIR|SINE|MIR 15235 NR_110805 101927207 Hs.638402 NR_110805 ENSG00000249497 LOC101927207 - uncharacterized LOC101927207 ncRNA Atac153_MAPQ30_peak_4995 chr4 6610468 6610468 + 3.15725 NA intron (NM_015274, intron 11 of 18) intron (NM_015274, intron 11 of 18) -31350 NM_001272054 93621 Hs.406590 NM_033296 HPRD:17589 MRFAP1 PAM14|PGR1 Morf4 family associated protein 1 protein-coding Atac153_MAPQ30_peak_4119 chr20 42876914 42876914 + 3.15725 NA intron (NR_046353, intron 1 of 3) intron (NR_046353, intron 1 of 3) 1016 NR_046353 78997 Hs.517059 NM_024034 HPRD:17033 GDAP1L1 dJ881L22.1|dJ995J12.1.1 ganglioside induced differentiation associated protein 1-like 1 protein-coding Atac153_MAPQ30_peak_1116 chr11 19399652 19399652 + 3.15725 NA intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) 27381 NM_001111018 89797 Hs.64341 NM_145117 HPRD:07385 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding Atac153_MAPQ30_peak_2928 chr17 73009958 73009958 + 3.15725 NA intron (NM_001545, intron 1 of 5) L2a|LINE|L2 1178 NM_001545 3396 Hs.407955 NM_001545 HPRD:04299 ICT1 DS-1|DS1|MRP-L58 immature colon carcinoma transcript 1 protein-coding Atac153_MAPQ30_peak_6757 chr9 116337531 116337531 + 3.15725 NA intron (NM_134427, intron 1 of 4) intron (NM_134427, intron 1 of 4) -5626 NM_001282922 5998 Hs.494875 NM_017790 HPRD:03720 RGS3 C2PA|RGP3 regulator of G-protein signaling 3 protein-coding Atac153_MAPQ30_peak_3276 chr19 32525298 32525298 + 3.15725 NA intron (NR_110674, intron 1 of 2) intron (NR_110674, intron 1 of 2) 8530 NR_110675 100996665 Hs.443685 NR_110673 ENSG00000267779 CTC-360P9.3 - uncharacterized LOC100996665 ncRNA Atac153_MAPQ30_peak_1103 chr11 15682368 15682368 + 3.15725 NA intron (NM_001293172, intron 1 of 2) intron (NM_001293172, intron 1 of 2) 16937 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding Atac153_MAPQ30_peak_2680 chr17 5994715 5994715 + 3.15725 NA intron (NM_015253, intron 4 of 8) L1MEd|LINE|L1 20781 NM_015253 23302 Hs.370166 NM_015253 HPRD:17193 WSCD1 - WSC domain containing 1 protein-coding Atac153_MAPQ30_peak_5738 chr6 93739263 93739263 + 3.15725 NA Intergenic THE1D-int|LTR|ERVL-MaLR 390037 NM_001288630 2045 Hs.73962 NM_004440 HPRD:03721 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding Atac153_MAPQ30_peak_3264 chr19 29925245 29925245 + 3.15725 NA intron (NR_040029, intron 1 of 9) intron (NR_040029, intron 1 of 9) 91414 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA Atac153_MAPQ30_peak_6864 chr9 139369519 139369519 + 3.15725 NA exon (NM_014866, exon 3 of 32) exon (NM_014866, exon 3 of 32) 7988 NM_014866 9919 Hs.522500 NM_014866 ENSG00000148396 SEC16A KIAA0310|SEC16L|p250 SEC16 homolog A (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_9 chr1 1785546 1785546 + 3.15725 NA intron (NM_001282538, intron 1 of 9) L2a|LINE|L2 37010 NM_001282538 2782 Hs.430425 NM_002074 HPRD:00766 GNB1 - guanine nucleotide binding protein (G protein), beta polypeptide 1 protein-coding Atac153_MAPQ30_peak_6814 chr9 130691192 130691192 + 3.15725 NA intron (NM_001135219, intron 2 of 9) L2b|LINE|L2 -1422 NM_173492 138429 Hs.734928 NM_173492 HPRD:15139 PIP5KL1 PIPKH|bA203J24.5 phosphatidylinositol-4-phosphate 5-kinase-like 1 protein-coding Atac153_MAPQ30_peak_1905 chr14 31957163 31957163 + 3.15725 NA promoter-TSS (NM_001197184) promoter-TSS (NM_001197184) -12 NM_001197184 2856 Hs.727479 NM_001197184 GPR33 - G protein-coupled receptor 33 (gene/pseudogene) protein-coding Atac153_MAPQ30_peak_3839 chr2 206580911 206580911 + 3.15725 NA intron (NM_003872, intron 2 of 16) intron (NM_003872, intron 2 of 16) 33687 NM_201264 8828 Hs.471200 NM_003872 HPRD:03643 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding Atac153_MAPQ30_peak_2053 chr14 97817301 97817301 + 3.15725 NA Intergenic MER63A|DNA|hAT-Blackjack -107852 NR_110165 101929241 Hs.650839 NR_110165 ENSG00000246084 LOC101929241 - uncharacterized LOC101929241 ncRNA Atac153_MAPQ30_peak_3658 chr2 106497978 106497978 + 3.15725 NA exon (NM_003581, exon 4 of 5) exon (NM_003581, exon 4 of 5) 29774 NM_001004720 8440 Hs.529244 NM_003581 HPRD:05378 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding Atac153_MAPQ30_peak_5560 chr6 3326602 3326602 + 3.15725 NA intron (NR_104448, intron 3 of 11) MER5A1|DNA|hAT-Charlie 67440 NM_001128592 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome (prosome, macropain) assembly chaperone 4 protein-coding Atac153_MAPQ30_peak_5589 chr6 10656146 10656146 + 3.15725 NA Intergenic Intergenic 38693 NR_026737 347744 Hs.61389 NM_001145020 ENSG00000137434 C6orf52 - chromosome 6 open reading frame 52 protein-coding Atac153_MAPQ30_peak_2972 chr17 80237236 80237236 + 3.15725 NA Intergenic L1MB7|LINE|L1 -5618 NR_110578 1453 Hs.631725 NM_001893 HPRD:02920 CSNK1D ASPS|CKIdelta|FASPS2|HCKID casein kinase 1, delta protein-coding Atac153_MAPQ30_peak_7007 chrX 43907076 43907076 + 3.15725 NA Intergenic MLT1H2|LTR|ERVL-MaLR -74155 NM_000266 4693 Hs.522615 NM_000266 HPRD:02404 NDP EVR2|FEVR|ND Norrie disease (pseudoglioma) protein-coding Atac153_MAPQ30_peak_2640 chr16 88934450 88934450 + 3.15725 NA Intergenic Intergenic -1382 NM_001080487 390748 Hs.730522 NM_001080487 ENSG00000205022 PABPN1L PABPNL1|ePABP2 poly(A) binding protein, nuclear 1-like (cytoplasmic) protein-coding Atac153_MAPQ30_peak_3948 chr2 240075933 240075933 + 3.15725 NA intron (NM_006037, intron 7 of 26) intron (NM_006037, intron 7 of 26) 41220 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA Atac153_MAPQ30_peak_2830 chr17 41626594 41626594 + 3.15725 NA Intergenic MIR|SINE|MIR -2794 NM_001079675 2118 Hs.434059 NM_001986 HPRD:02833 ETV4 E1A-F|E1AF|PEA3|PEAS3 ets variant 4 protein-coding Atac153_MAPQ30_peak_332 chr1 113615312 113615312 + 3.15725 NA promoter-TSS (NM_014813) promoter-TSS (NM_014813) 412 NR_103777 100996251 Hs.382067 NR_103777 ENSG00000238198 LOC100996251 - uncharacterized LOC100996251 ncRNA Atac153_MAPQ30_peak_2723 chr17 15849710 15849710 + 3.15725 NA intron (NM_000676, intron 1 of 1) intron (NM_000676, intron 1 of 1) 1479 NM_000676 136 Hs.167046 NM_000676 HPRD:15971 ADORA2B ADORA2 adenosine A2b receptor protein-coding Atac153_MAPQ30_peak_6726 chr9 100987681 100987681 + 3.15725 NA intron (NR_051978, intron 4 of 11) intron (NR_051978, intron 4 of 11) 3818 NR_106913 102465514 NR_106913 MIR6854 hsa-mir-6854 microRNA 6854 ncRNA Atac153_MAPQ30_peak_7104 chrX 76453628 76453628 + 3.15725 NA Intergenic L1MA2|LINE|L1 -218671 NR_110406 101928469 Hs.640805 NR_110400 MIR325HG MIR384HG MIR325 host gene (non-protein coding) ncRNA Atac153_MAPQ30_peak_2314 chr15 91644553 91644553 + 3.15725 NA intron (NM_001167580, intron 1 of 11) intron (NM_001167580, intron 1 of 11) 1014 NM_014848 9899 Hs.21754 NM_014848 HPRD:11765 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding Atac153_MAPQ30_peak_1367 chr11 124489612 124489612 + 3.15725 NA exon (NM_052959, exon 4 of 4) exon (NM_052959, exon 4 of 4) -3130 NM_032811 84897 Hs.436410 NM_032811 TBRG1 NIAM|TB-5 transforming growth factor beta regulator 1 protein-coding Atac153_MAPQ30_peak_4973 chr4 3589907 3589907 + 3.15725 NA intron (NR_040045, intron 2 of 2) intron (NR_040045, intron 2 of 2) 11311 NR_040045 285492 Hs.145563 NM_173661 LINC00955 - long intergenic non-protein coding RNA 955 ncRNA Atac153_MAPQ30_peak_1258 chr11 71726950 71726950 + 3.15725 NA non-coding (NR_104178, exon 1 of 4) non-coding (NR_104178, exon 1 of 4) 1613 NR_104178 100128494 Hs.713607 NR_104178 LOC100128494 - uncharacterized LOC100128494 ncRNA Atac153_MAPQ30_peak_4290 chr21 41799443 41799443 + 3.15725 NA intron (NR_073202, intron 3 of 32) intron (NR_073202, intron 3 of 32) 44432 NR_038899 100506492 Hs.667053 NR_038896 ENSG00000235123 DSCAM-AS1 M41 DSCAM antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6141 chr7 131875693 131875693 + 3.15725 NA intron (NM_020911, intron 14 of 31) intron (NM_020911, intron 14 of 31) 280714 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA Atac153_MAPQ30_peak_6148 chr7 132321337 132321337 + 3.15725 NA intron (NM_181775, intron 2 of 4) intron (NM_181775, intron 2 of 4) 12110 NM_181775 91584 Hs.511454 NM_020911 HPRD:10901 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding Atac153_MAPQ30_peak_6041 chr7 67605461 67605461 + 3.15725 NA Intergenic Intergenic 120221 NR_120514 102723427 Hs.583491 NR_120514 LOC102723427 - uncharacterized LOC102723427 ncRNA Atac153_MAPQ30_peak_7243 chrX 140741785 140741785 + 3.15725 NA Intergenic Intergenic 44870 NM_022661 64663 Hs.375036 NM_022661 HPRD:02270 SPANXC C|CT11.3|CTp11|SPANX-C SPANX family, member C protein-coding Atac153_MAPQ30_peak_5532 chr5 177842550 177842550 + 3.15725 NA intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) 175006 NM_173465 91522 Hs.660026 NM_173465 HPRD:16733 COL23A1 - collagen, type XXIII, alpha 1 protein-coding Atac153_MAPQ30_peak_1557 chr12 65340159 65340159 + 3.15725 NA intron (NR_033988, intron 2 of 2) intron (NR_033988, intron 2 of 2) 62605 NR_033988 400046 Hs.591032 NR_033988 ENSG00000255693 FLJ41278 - uncharacterized LOC400046 ncRNA Atac153_MAPQ30_peak_883 chr10 104292247 104292247 + 3.15725 NA intron (NM_016169, intron 2 of 11) MLT1E1A|LTR|ERVL-MaLR 28528 NM_016169 51684 Hs.404089 NM_016169 HPRD:06124 SUFU PRO1280|SUFUH|SUFUXL suppressor of fused homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_700 chr10 29545274 29545274 + 3.15725 NA Intergenic Intergenic -32716 NM_032517 84569 Hs.558572 NM_032517 HPRD:14336 LYZL1 KAAG648|LYC2|PRO1278|bA534G20.1 lysozyme-like 1 protein-coding Atac153_MAPQ30_peak_3119 chr18 56723115 56723115 + 3.15725 NA Intergenic LTR16E2|LTR|ERVL 20144 NR_024021 390858 Hs.722775 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo Atac153_MAPQ30_peak_5919 chr7 17537414 17537414 + 3.15725 NA intron (NR_110013, intron 1 of 3) MER5A|DNA|hAT-Charlie 61119 NR_110013 101927630 Hs.583400 NR_110013 LOC101927630 - uncharacterized LOC101927630 ncRNA Atac153_MAPQ30_peak_6156 chr7 134622739 134622739 + 3.15725 NA intron (NM_033157, intron 6 of 14) intron (NM_033157, intron 6 of 14) 46588 NM_033140 800 Hs.490203 NM_004342 HPRD:00251 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding Atac153_MAPQ30_peak_4324 chr21 46977862 46977862 + 3.15725 NA Intergenic Intergenic -15477 NM_194255 6573 Hs.84190 NM_003056 HPRD:02691 SLC19A1 CHMD|FOLT|IFC1|REFC|RFC1 solute carrier family 19 (folate transporter), member 1 protein-coding Atac153_MAPQ30_peak_2573 chr16 75147561 75147561 + 3.15725 NA intron (NM_194436, intron 7 of 10) intron (NM_194436, intron 7 of 10) 3109 NM_194436 197257 Hs.380929 NM_153486 HPRD:06318 LDHD DLD lactate dehydrogenase D protein-coding Atac153_MAPQ30_peak_3360 chr19 58639059 58639059 + 3.15725 NA 3' UTR (NM_024620, exon 4 of 4) 3' UTR (NM_024620, exon 4 of 4) -9266 NR_027135 65982 Hs.235390 NM_023926 HPRD:07802 ZSCAN18 ZNF447 zinc finger and SCAN domain containing 18 protein-coding Atac153_MAPQ30_peak_1835 chr13 81109113 81109113 + 3.15725 NA Intergenic MLT1H1|LTR|ERVL-MaLR -194027 NM_005842 10253 Hs.18676 NM_005842 HPRD:03916 SPRY2 hSPRY2 sprouty homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_2919 chr17 71165898 71165898 + 3.15725 NA exon (NM_001050, exon 2 of 2) exon (NM_001050, exon 2 of 2) 4738 NM_001050 6752 Hs.514451 NM_001050 SSTR2 - somatostatin receptor 2 protein-coding Atac153_MAPQ30_peak_1991 chr14 75614652 75614652 + 3.15725 NA intron (NM_006827, intron 2 of 4) intron (NM_006827, intron 2 of 4) -20874 NM_033116 91754 Hs.7200 NM_033116 HPRD:11386 NEK9 NERCC|NERCC1|Nek8 NIMA-related kinase 9 protein-coding Atac153_MAPQ30_peak_3494 chr2 33108811 33108811 + 3.15725 NA intron (NR_027099, intron 2 of 5) intron (NR_027099, intron 2 of 5) 943 NR_027100 285045 Hs.434660 NR_027098 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA Atac153_MAPQ30_peak_5657 chr6 36737739 36737739 + 3.15725 NA intron (NM_020939, intron 10 of 20) intron (NM_020939, intron 10 of 20) 69481 NM_020939 57699 Hs.657869 NM_020939 HPRD:05018 CPNE5 COPN5|CPN5 copine V protein-coding Atac153_MAPQ30_peak_4419 chr22 35325791 35325791 + 3.15725 NA Intergenic Intergenic -136339 NM_001008494 91464 Hs.567637 NM_001008494 HPRD:17957 ISX Pix-1|RAXLX intestine-specific homeobox protein-coding Atac153_MAPQ30_peak_6314 chr8 22647767 22647767 + 3.15725 NA intron (NM_144962, intron 4 of 6) L2c|LINE|L2 -87718 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA Atac153_MAPQ30_peak_2597 chr16 82716893 82716893 + 3.15725 NA intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) -5643 NR_107025 102465863 NR_107025 MIR8058 hsa-mir-8058 microRNA 8058 ncRNA Atac153_MAPQ30_peak_3732 chr2 130620013 130620013 + 3.15725 NA Intergenic L2b|LINE|L2 -60737 NR_110285 101927924 Hs.570248 NR_110285 ENSG00000237574 LOC101927924 - uncharacterized LOC101927924 ncRNA Atac153_MAPQ30_peak_6497 chr8 134121949 134121949 + 3.15725 NA intron (NM_003235, intron 43 of 47) MIRb|SINE|MIR -6639 NM_001282964 6503 Hs.75367 NM_006748 HPRD:03060 SLA SLA1|SLAP Src-like-adaptor protein-coding Atac153_MAPQ30_peak_4924 chr3 183528863 183528863 + 3.15725 NA 3' UTR (NM_018023, exon 31 of 31) 3' UTR (NM_018023, exon 31 of 31) 14530 NM_024871 79929 Hs.478465 NM_024871 HPRD:07793 MAP6D1 MAPO6D1|SL21 MAP6 domain containing 1 protein-coding Atac153_MAPQ30_peak_849 chr10 88054825 88054825 + 3.15725 NA intron (NM_017551, intron 2 of 15) L2|LINE|L2 -30280 NR_029907 442911 NR_029907 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA Atac153_MAPQ30_peak_185 chr1 34508376 34508376 + 3.15725 NA intron (NM_052896, intron 2 of 69) L2b|LINE|L2 122499 NM_001281956 114784 Hs.656915 NM_052896 HPRD:13094 CSMD2 dJ1007G16.1|dJ1007G16.2|dJ947L8.1 CUB and Sushi multiple domains 2 protein-coding Atac153_MAPQ30_peak_1029 chr10 134912956 134912956 + 3.15725 NA intron (NM_001083909, intron 4 of 6) intron (NM_001083909, intron 4 of 6) -2794 NM_001291085 84435 Hs.435183 NM_032422 HPRD:17058 GPR123 - G protein-coupled receptor 123 protein-coding Atac153_MAPQ30_peak_5179 chr4 165932570 165932570 + 3.15725 NA Intergenic Intergenic -20581 NM_001258025 166655 Hs.368004 NM_152620 HPRD:11502 TRIM60 RNF129|RNF33 tripartite motif containing 60 protein-coding Atac153_MAPQ30_peak_2734 chr17 17786172 17786172 + 3.15725 NA exon (NM_001082968, exon 6 of 15) exon (NM_001082968, exon 6 of 15) -45847 NM_004176 6720 Hs.592123 NM_004176 HPRD:01701 SREBF1 SREBP-1c|SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding Atac153_MAPQ30_peak_2570 chr16 74407258 74407258 + 3.15725 NA Intergenic MLT1H|LTR|ERVL-MaLR -5105 NR_026950 283922 Hs.558726 NR_026950 ENSG00000214331 LOC283922 - pyruvate dehydrogenase phosphatase regulatory subunit pseudogene pseudo Atac153_MAPQ30_peak_55 chr1 9027730 9027730 + 3.15725 NA exon (NM_001270500, exon 6 of 8) exon (NM_001270500, exon 6 of 8) 21837 NM_001270502 765 Hs.100322 NM_001215 HPRD:00264 CA6 CA-VI|GUSTIN carbonic anhydrase VI protein-coding Atac153_MAPQ30_peak_578 chr1 230526302 230526302 + 3.15725 NA intron (NM_001258311, intron 1 of 6) intron (NM_001258311, intron 1 of 6) 35372 NM_001258311 79605 Hs.520463 NM_024554 HPRD:10148 PGBD5 - piggyBac transposable element derived 5 protein-coding Atac153_MAPQ30_peak_3225 chr19 12989376 12989376 + 3.15725 NA exon (NM_001375, exon 5 of 6) exon (NM_001375, exon 5 of 6) 2959 NM_001375 1777 Hs.118243 NM_001375 HPRD:00531 DNASE2 DNASE2A|DNL|DNL2 deoxyribonuclease II, lysosomal protein-coding Atac153_MAPQ30_peak_3312 chr19 42761130 42761130 + 3.15725 NA Intergenic AluSq|SINE|Alu -1814 NM_006494 2077 Hs.655969 NM_006494 HPRD:09942 ERF CRS4|PE-2|PE2 Ets2 repressor factor protein-coding Atac153_MAPQ30_peak_922 chr10 118430789 118430789 + 3.15725 NA TTS (NM_025015) TTS (NM_025015) -1308 NM_144661 143379 Hs.121347 NM_144661 HPRD:12592 C10orf82 - chromosome 10 open reading frame 82 protein-coding Atac153_MAPQ30_peak_6709 chr9 96731089 96731089 + 3.15725 NA Intergenic Intergenic -13481 NM_021570 56033 Hs.164960 NM_021570 HPRD:16017 BARX1 - BARX homeobox 1 protein-coding Atac153_MAPQ30_peak_1445 chr12 4969703 4969703 + 3.15725 NA Intergenic Intergenic -49370 NM_000217 3736 Hs.416139 NM_000217 HPRD:08885 KCNA1 AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1 potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia) protein-coding Atac153_MAPQ30_peak_1176 chr11 45898263 45898263 + 3.15725 NA intron (NM_001127457, intron 11 of 11) intron (NM_001127457, intron 11 of 11) -8784 NM_005456 9479 Hs.234249 NM_005456 HPRD:05223 MAPK8IP1 IB1|JIP-1|JIP1|PRKM8IP mitogen-activated protein kinase 8 interacting protein 1 protein-coding Atac153_MAPQ30_peak_1025 chr10 134761222 134761222 + 3.15725 NA promoter-TSS (NR_120626) promoter-TSS (NR_120626) -422 NR_120626 101927590 Hs.448598 NR_120626 ENSG00000232903 LINC01166 - long intergenic non-protein coding RNA 1166 ncRNA Atac153_MAPQ30_peak_1817 chr13 51722225 51722225 + 3.15725 NA intron (NR_102431, intron 1 of 4) intron (NR_102431, intron 1 of 4) 24133 NR_102432 647166 Hs.195052 NR_102431 LINC00371 LINC00372 long intergenic non-protein coding RNA 371 ncRNA Atac153_MAPQ30_peak_107 chr1 17958321 17958321 + 3.15725 NA intron (NM_001011722, intron 13 of 26) MER45A|DNA|hAT-Tip100 51273 NM_001011722 55160 Hs.443460 NM_018125 HPRD:07679 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor (GEF) 10-like protein-coding Atac153_MAPQ30_peak_3933 chr2 238436223 238436223 + 3.15725 NA intron (NM_001042467, intron 8 of 14) intron (NM_001042467, intron 8 of 14) 16649 NR_106869 102465486 NR_106869 MIR6811 hsa-mir-6811 microRNA 6811 ncRNA Atac153_MAPQ30_peak_1358 chr11 120395185 120395185 + 3.15725 NA intron (NM_014619, intron 1 of 20) intron (NM_014619, intron 1 of 20) 12720 NM_014619 2900 Hs.538738 NM_014619 HPRD:02613 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate receptor, ionotropic, kainate 4 protein-coding Atac153_MAPQ30_peak_6027 chr7 61739619 61739619 + 3.15725 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat 1024815 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo Atac153_MAPQ30_peak_6563 chr8 144940563 144940563 + 3.15725 NA exon (NM_031308, exon 2 of 2) exon (NM_031308, exon 2 of 2) 12069 NM_031308 83481 Hs.200412 NM_031308 EPPK1 EPIPL|EPIPL1 epiplakin 1 protein-coding Atac153_MAPQ30_peak_6599 chr9 18851145 18851145 + 3.15725 NA intron (NM_001040272, intron 23 of 28) intron (NM_001040272, intron 23 of 28) 182111 NM_001287050 158297 Hs.731593 NM_153707 HPRD:16676 FAM154A C9orf138 family with sequence similarity 154, member A protein-coding Atac153_MAPQ30_peak_1725 chr12 129767090 129767090 + 3.15725 NA intron (NM_133448, intron 4 of 8) intron (NM_133448, intron 4 of 8) 73944 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 LOC101927735 - uncharacterized LOC101927735 ncRNA Atac153_MAPQ30_peak_427 chr1 167610071 167610071 + 3.15725 NA intron (NM_052862, intron 1 of 6) AluJb|SINE|Alu 10597 NM_052862 92241 Hs.493867 NM_052862 HPRD:10077 RCSD1 CAPZIP|MK2S4 RCSD domain containing 1 protein-coding Atac153_MAPQ30_peak_3437 chr2 18335543 18335543 + 3.15725 NA Intergenic MLT1D|LTR|ERVL-MaLR 275619 NM_002252 3790 Hs.414489 NM_002252 HPRD:04865 KCNS3 KV9.3 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 protein-coding Atac153_MAPQ30_peak_3382 chr2 2712215 2712215 + 3.15725 NA Intergenic Intergenic -377170 NM_015025 23040 Hs.434418 NM_015025 HPRD:14797 MYT1L NZF1|ZC2HC4B myelin transcription factor 1-like protein-coding Atac153_MAPQ30_peak_5435 chr5 144630982 144630982 + 3.15725 NA Intergenic Intergenic 583950 NM_138492 153768 Hs.314261 NM_138492 HPRD:14479 PRELID2 - PRELI domain containing 2 protein-coding Atac153_MAPQ30_peak_6584 chr9 7153675 7153675 + 3.15725 NA intron (NM_015061, intron 19 of 21) intron (NM_015061, intron 19 of 21) 396034 NM_015061 23081 Hs.709425 NM_015061 HPRD:12016 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C|bA146B14.1 lysine (K)-specific demethylase 4C protein-coding Atac153_MAPQ30_peak_7105 chrX 76625594 76625594 + 3.15725 NA Intergenic Intergenic -84053 NM_003868 8823 Hs.666364 NM_003868 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding Atac153_MAPQ30_peak_6139 chr7 131838700 131838700 + 3.15725 NA intron (NM_020911, intron 25 of 31) intron (NM_020911, intron 25 of 31) 243721 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA Atac153_MAPQ30_peak_4156 chr20 50082299 50082299 + 3.15725 NA intron (NM_001258296, intron 5 of 10) L2a|LINE|L2 -12785 NR_036162 100422889 NR_036162 MIR3194 - microRNA 3194 ncRNA Atac153_MAPQ30_peak_6184 chr7 147404925 147404925 + 3.15725 NA intron (NM_014141, intron 13 of 23) L1M2|LINE|L1 -149963 NR_031690 100302191 NR_031690 miRBase:MI0006424 MIR548I4 MIR548I-4|MIRN548I4|hsa-mir-548i-4 microRNA 548i-4 ncRNA Atac153_MAPQ30_peak_821 chr10 80237400 80237400 + 3.15725 NA Intergenic L2a|LINE|L2 210315 NR_073447 414243 Hs.55047 NR_073447 ENSG00000227136 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA Atac153_MAPQ30_peak_3643 chr2 101971038 101971038 + 3.15725 NA intron (NM_153836, intron 3 of 3) intron (NM_153836, intron 3 of 3) 32927 NM_153836 200407 Hs.732289 NM_153836 CREG2 - cellular repressor of E1A-stimulated genes 2 protein-coding Atac153_MAPQ30_peak_3635 chr2 98636907 98636907 + 3.15725 NA Intergenic Intergenic -24553 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding Atac153_MAPQ30_peak_6529 chr8 140855094 140855094 + 3.15725 NA intron (NM_031466, intron 21 of 22) intron (NM_031466, intron 21 of 22) -139795 NM_001282534 51305 Hs.493037 NM_001282534 HPRD:16167 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium channel, subfamily K, member 9 protein-coding Atac153_MAPQ30_peak_3900 chr2 231776020 231776020 + 3.15725 NA intron (NM_005683, intron 1 of 1) MLT1K|LTR|ERVL-MaLR 13921 NM_005683 9290 Hs.114545 NM_005683 HPRD:07248 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding Atac153_MAPQ30_peak_3786 chr2 169040266 169040266 + 3.15725 NA intron (NM_013233, intron 1 of 17) intron (NM_013233, intron 1 of 17) 63839 NM_013233 27347 Hs.276271 NM_013233 HPRD:09627 STK39 DCHT|PASK|SPAK serine threonine kinase 39 protein-coding Atac153_MAPQ30_peak_5686 chr6 42882297 42882297 + 3.15725 NA Intergenic AluJb|SINE|Alu -1430 NM_138296 171558 Hs.169002 NM_138296 HPRD:08435 PTCRA PT-ALPHA|PTA pre T-cell antigen receptor alpha protein-coding Atac153_MAPQ30_peak_6182 chr7 143175078 143175078 + 3.15725 NA exon (NM_176883, exon 1 of 1) exon (NM_176883, exon 1 of 1) 112 NM_176883 259287 Hs.650648 NM_176883 HPRD:18151 TAS2R41 T2R41|T2R59 taste receptor, type 2, member 41 protein-coding Atac153_MAPQ30_peak_5046 chr4 24004051 24004051 + 3.15725 NA Intergenic Intergenic -112351 NM_013261 10891 Hs.527078 NM_013261 HPRD:05155 PPARGC1A LEM6|PGC-1(alpha)|PGC-1v|PGC1|PGC1A|PPARGC1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha protein-coding Atac153_MAPQ30_peak_6250 chr8 1981790 1981790 + 3.15725 NA Intergenic Intergenic -11368 NM_003970 9172 Hs.443683 NM_003970 HPRD:04619 MYOM2 TTNAP myomesin 2 protein-coding Atac153_MAPQ30_peak_3157 chr18 74576768 74576768 + 3.15725 NA intron (NM_007345, intron 3 of 30) L1MDa|LINE|L1 40652 NM_007345 7776 Hs.719137 NM_007345 HPRD:05301 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding Atac153_MAPQ30_peak_4702 chr3 52861589 52861589 + 3.15725 NA intron (NM_002218, intron 2 of 23) intron (NM_002218, intron 2 of 23) 3128 NM_002218 3700 Hs.709406 NM_002218 HPRD:02781 ITIH4 GP120|H4P|IHRP|ITI-HC4|ITIHL1|PK-120|PK120 inter-alpha-trypsin inhibitor heavy chain family, member 4 protein-coding Atac153_MAPQ30_peak_1888 chr13 115095612 115095612 + 3.15725 NA Intergenic L1MA9|LINE|L1 15647 NM_032436 283489 Hs.7542 NM_032436 HPRD:10707 CHAMP1 C13orf8|CAMP|CHAMP|ZNF828 chromosome alignment maintaining phosphoprotein 1 protein-coding Atac153_MAPQ30_peak_5353 chr5 87357923 87357923 + 3.15725 NA Intergenic L1MA4A|LINE|L1 206773 NM_001289008 153396 Hs.379972 NM_153354 HPRD:14555 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding Atac153_MAPQ30_peak_4002 chr20 13802107 13802107 + 3.15725 NA Intergenic MLT1F1|LTR|ERVL-MaLR 36435 NR_029377 79133 Hs.472165 NM_024120 HPRD:12780 NDUFAF5 C20orf7|bA526K24.2|dJ842G6.1 NADH dehydrogenase (ubiquinone) complex I, assembly factor 5 protein-coding Atac153_MAPQ30_peak_2470 chr16 29803802 29803802 + 3.15725 NA 5' UTR (NM_001256269, exon 2 of 15) 5' UTR (NM_001256269, exon 2 of 15) 1513 NM_001256270 3835 Hs.612151 NM_007317 HPRD:04445 KIF22 A-328A3.2|KID|KNSL4|OBP|OBP-1|OBP-2|SEMDJL2 kinesin family member 22 protein-coding Atac153_MAPQ30_peak_2349 chr16 363896 363896 + 3.15725 NA intron (NM_003502, intron 3 of 10) intron (NM_003502, intron 3 of 10) 30778 NM_006849 64714 Hs.66581 NM_006849 HPRD:07617 PDIA2 PDA2|PDI|PDIP|PDIR protein disulfide isomerase family A, member 2 protein-coding Atac153_MAPQ30_peak_3932 chr2 238400652 238400652 + 3.15725 NA intron (NR_104019, intron 1 of 16) MER5A1|DNA|hAT-Charlie 4790 NM_001281473 79083 Hs.102406 NM_024101 HPRD:09409 MLPH SLAC2-A melanophilin protein-coding Atac153_MAPQ30_peak_2876 chr17 55968333 55968333 + 3.15725 NA intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 12417 NM_001292025 404093 Hs.46679 NM_001271875 HPRD:13098 CUEDC1 - CUE domain containing 1 protein-coding Atac153_MAPQ30_peak_1478 chr12 28967359 28967359 + 3.15725 NA Intergenic HERVL18-int|LTR|ERVL -334577 NM_001271783 55711 Hs.728955 NM_018099 HPRD:14723 FAR2 MLSTD1|SDR10E2 fatty acyl CoA reductase 2 protein-coding Atac153_MAPQ30_peak_6545 chr8 142849825 142849825 + 3.15725 NA Intergenic Intergenic -332495 NR_102364 389690 Hs.689547 NM_207414 HPRD:13480 MROH5 - maestro heat-like repeat family member 5 protein-coding Atac153_MAPQ30_peak_5518 chr5 176107492 176107492 + 3.15725 NA Intergenic CpG 33104 NM_012171 26262 Hs.532129 NM_012171 HPRD:18198 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding Atac153_MAPQ30_peak_1953 chr14 65192391 65192391 + 3.15725 NA intron (NM_015549, intron 1 of 14) intron (NM_015549, intron 1 of 14) 21198 NM_015549 26030 Hs.509637 NM_015549 HPRD:17861 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding Atac153_MAPQ30_peak_6631 chr9 71292407 71292407 + 3.15725 NA Intergenic Intergenic -27923 NM_001278253 8395 Hs.534371 NM_003558 HPRD:04121 PIP5K1B MSS4|STM7 phosphatidylinositol-4-phosphate 5-kinase, type I, beta protein-coding Atac153_MAPQ30_peak_1919 chr14 52600267 52600267 + 3.15725 NA Intergenic L2a|LINE|L2 -64321 NM_007361 22795 Hs.369840 NM_007361 HPRD:05654 NID2 NID-2 nidogen 2 (osteonidogen) protein-coding Atac153_MAPQ30_peak_6827 chr9 134110820 134110820 + 3.15725 NA TTS (NM_005085) TTS (NM_005085) 41086 NM_033387 286336 Hs.143878 NM_033387 HPRD:12968 FAM78A C9orf59 family with sequence similarity 78, member A protein-coding Atac153_MAPQ30_peak_5274 chr5 14607458 14607458 + 3.15725 NA exon (NM_019018, exon 6 of 8) exon (NM_019018, exon 6 of 8) 25567 NM_019018 54491 Hs.155085 NM_019018 FAM105A NET20 family with sequence similarity 105, member A protein-coding Atac153_MAPQ30_peak_5062 chr4 37972270 37972270 + 3.15725 NA intron (NM_001253912, intron 2 of 20) intron (NM_001253912, intron 2 of 20) 10214 NM_006607 10744 Hs.668806 NM_006607 HPRD:09176 PTTG2 - pituitary tumor-transforming 2 protein-coding Atac153_MAPQ30_peak_1631 chr12 110001293 110001293 + 3.15725 NA intron (NR_038118, intron 4 of 9) L2b|LINE|L2 10065 NM_052845 326625 Hs.12106 NM_052845 HPRD:07398 MMAB ATR|CFAP23|cblB|cob methylmalonic aciduria (cobalamin deficiency) cblB type protein-coding Atac153_MAPQ30_peak_5492 chr5 170201026 170201026 + 3.15725 NA Intergenic L2a|LINE|L2 -9697 NM_001291985 2568 Hs.26225 NM_014211 HPRD:04105 GABRP - gamma-aminobutyric acid (GABA) A receptor, pi protein-coding Atac153_MAPQ30_peak_285 chr1 68036256 68036256 + 3.15725 NA Intergenic Intergenic -114604 NM_001199741 1647 Hs.80409 NM_001924 HPRD:00528 GADD45A DDIT1|GADD45 growth arrest and DNA-damage-inducible, alpha protein-coding Atac153_MAPQ30_peak_340 chr1 115882337 115882337 + 3.15725 NA Intergenic Intergenic -1480 NM_002506 4803 Hs.2561 NM_002506 HPRD:08874 NGF Beta-NGF|HSAN5|NGFB nerve growth factor (beta polypeptide) protein-coding Atac153_MAPQ30_peak_3886 chr2 224665141 224665141 + 3.15725 NA intron (NR_110906, intron 1 of 3) AluJr|SINE|Alu 37178 NR_110906 130340 Hs.632555 NM_178814 HPRD:16495 AP1S3 - adaptor-related protein complex 1, sigma 3 subunit protein-coding Atac153_MAPQ30_peak_6934 chrX 18918064 18918064 + 3.15725 NA intron (NM_000292, intron 28 of 32) intron (NM_000292, intron 28 of 32) 9650 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6896 chrX 6823207 6823207 + 3.15725 NA Intergenic Intergenic -242694 NR_039924 100616467 NR_039924 miRBase:MI0017408 MIR4767 - microRNA 4767 ncRNA Atac153_MAPQ30_peak_1157 chr11 44065740 44065740 + 3.15725 NA Intergenic L1MEg|LINE|L1 -3791 NM_001031854 390110 Hs.558851 NM_001031854 ENSG00000205126 ACCSL - 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like protein-coding Atac153_MAPQ30_peak_4475 chr22 45338397 45338397 + 3.15725 NA intron (NM_001284296, intron 2 of 13) MIR|SINE|MIR 66477 NM_001284296 112885 Hs.254097 NM_138415 HPRD:13997 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding Atac153_MAPQ30_peak_1344 chr11 117796327 117796327 + 3.15725 NA intron (NM_001077263, intron 1 of 12) intron (NM_001077263, intron 1 of 12) 3841 NM_001206790 84000 Hs.266308 NM_032046 HPRD:07493 TMPRSS13 MSP|MSPL|MSPS|TMPRSS11 transmembrane protease, serine 13 protein-coding Atac153_MAPQ30_peak_4394 chr22 30657255 30657255 + 3.15725 NA Intergenic Intergenic 5574 NM_020530 5008 Hs.248156 NM_020530 HPRD:01300 OSM - oncostatin M protein-coding Atac153_MAPQ30_peak_3059 chr18 35186122 35186122 + 3.15725 NA Intergenic THE1B|LTR|ERVL-MaLR -40122 NM_020180 56853 Hs.435976 NM_020180 HPRD:12534 CELF4 BRUNOL-4|BRUNOL4 CUGBP, Elav-like family member 4 protein-coding Atac153_MAPQ30_peak_4606 chr3 31152377 31152377 + 3.15725 NA Intergenic Intergenic -216224 NM_207359 339896 Hs.657052 NM_207359 HPRD:13557 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase-like 1 protein-coding Atac153_MAPQ30_peak_53 chr1 8658380 8658380 + 3.15725 NA intron (NM_012102, intron 5 of 23) intron (NM_012102, intron 5 of 23) -174633 NM_001042682 473 Hs.463041 NM_012102 HPRD:05566 RERE ARG|ARP|ATN1L|DNB1 arginine-glutamic acid dipeptide (RE) repeats protein-coding Atac153_MAPQ30_peak_6952 chrX 22868532 22868532 + 3.15725 NA intron (NR_073010, intron 3 of 5) intron (NR_073010, intron 3 of 5) -149546 NM_182699 168400 Hs.434416 NM_182699 HPRD:06466 DDX53 CAGE|CT26 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 protein-coding Atac153_MAPQ30_peak_5520 chr5 176168551 176168551 + 3.15725 NA Intergenic Intergenic -1655 NR_108030 102577424 Hs.349025 NR_108030 LOC102577424 - uncharacterized LOC102577424 ncRNA Atac153_MAPQ30_peak_3980 chr20 2974724 2974724 + 3.15725 NA intron (NM_080840, intron 8 of 22) ERVL-E-int|LTR|ERVL -49544 NM_178331 2797 Hs.129715 NM_001501 HPRD:03830 GNRH2 GnRH-II|LH-RHII gonadotropin-releasing hormone 2 protein-coding Atac153_MAPQ30_peak_3178 chr19 1340878 1340878 + 3.15725 NA Intergenic Intergenic -14098 NM_032853 84939 Hs.515016 NM_032853 HPRD:14789 MUM1 EXPAND1|HSPC211|MUM-1 melanoma associated antigen (mutated) 1 protein-coding Atac153_MAPQ30_peak_314 chr1 109102291 109102291 + 3.15725 NA promoter-TSS (NM_001010883) promoter-TSS (NM_001010883) -680 NM_001010883 284611 Hs.200230 NM_001010883 HPRD:17339 FAM102B SYM-3B family with sequence similarity 102, member B protein-coding Atac153_MAPQ30_peak_4513 chr22 49261834 49261834 + 3.15725 NA promoter-TSS (NR_038944) promoter-TSS (NR_038944) -748 NR_038944 100128946 Hs.535676 NR_038944 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA Atac153_MAPQ30_peak_5006 chr4 7659721 7659721 + 3.15725 NA intron (NM_020777, intron 5 of 26) (TGAG)n|Simple_repeat|Simple_repeat -96096 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_7138 chrX 102659606 102659606 + 3.15725 NA Intergenic Intergenic 27497 NM_014380 27018 Hs.448588 NM_014380 HPRD:02291 NGFRAP1 BEX3|Bex|DXS6984E|HGR74|NADE nerve growth factor receptor (TNFRSF16) associated protein 1 protein-coding Atac153_MAPQ30_peak_4855 chr3 134679718 134679718 + 3.15725 NA intron (NM_004441, intron 3 of 15) intron (NM_004441, intron 3 of 15) 165619 NM_004441 2047 Hs.116092 NM_004441 HPRD:02790 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding Atac153_MAPQ30_peak_1250 chr11 70514094 70514094 + 3.15725 NA intron (NM_012309, intron 12 of 22) intron (NM_012309, intron 12 of 22) -6149 NR_110766 22941 Hs.268726 NM_012309 HPRD:04479 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding Atac153_MAPQ30_peak_6133 chr7 130117251 130117251 + 3.15725 NA Intergenic Intergenic -8765 NM_001253901 4232 Hs.270978 NM_002402 HPRD:06776 MEST PEG1 mesoderm specific transcript protein-coding Atac153_MAPQ30_peak_2726 chr17 16924248 16924248 + 3.15725 NA Intergenic MER102b|DNA|hAT-Charlie -21826 NM_201274 23164 Hs.462341 NM_015134 HPRD:17591 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding Atac153_MAPQ30_peak_5552 chr6 402019 402019 + 3.15725 NA intron (NR_046000, intron 7 of 9) intron (NR_046000, intron 7 of 9) 10280 NM_002460 3662 Hs.401013 NM_002460 HPRD:03543 IRF4 LSIRF|MUM1|NF-EM5 interferon regulatory factor 4 protein-coding Atac153_MAPQ30_peak_1822 chr13 55269329 55269329 + 3.15725 NA Intergenic MER4A1|LTR|ERV1 -383146 NR_031628 100302187 NR_031628 MIR1297 MIRN1297|hsa-mir-1297 microRNA 1297 ncRNA Atac153_MAPQ30_peak_682 chr10 18739196 18739196 + 3.15725 NA intron (NM_201572, intron 3 of 13) intron (NM_201572, intron 3 of 13) 49683 NM_201570 783 Hs.59093 NM_000724 HPRD:02473 CACNB2 CACNLB2|CAVB2|MYSB calcium channel, voltage-dependent, beta 2 subunit protein-coding Atac153_MAPQ30_peak_299 chr1 90627820 90627820 + 3.15725 NA Intergenic Intergenic 167142 NM_182976 284695 Hs.306221 NM_181781 HPRD:15774 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding Atac153_MAPQ30_peak_1429 chr12 2885876 2885876 + 3.15725 NA Intergenic Intergenic -5041 NR_033958 283440 Hs.658536 NR_033958 ENSG00000255669 LOC283440 - uncharacterized LOC283440 ncRNA Atac153_MAPQ30_peak_444 chr1 178481412 178481412 + 3.15725 NA promoter-TSS (NM_001170723) promoter-TSS (NM_001170723) -800 NM_001170722 84066 Hs.534501 NM_032126 HPRD:13169 TEX35 C1orf49|TSC24 testis expressed 35 protein-coding Atac153_MAPQ30_peak_2550 chr16 68895018 68895018 + 3.15725 NA intron (NM_024562, intron 2 of 17) L2c|LINE|L2 17509 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_382 chr1 154527177 154527177 + 3.15725 NA intron (NM_017582, intron 4 of 12) intron (NM_017582, intron 4 of 12) 3943 NM_017582 55585 Hs.607928 NM_017582 HPRD:15601 UBE2Q1 GTAP|NICE-5|UBE2Q ubiquitin-conjugating enzyme E2Q family member 1 protein-coding Atac153_MAPQ30_peak_799 chr10 75276376 75276376 + 3.15725 NA exon (NM_152586, exon 18 of 22) exon (NM_152586, exon 18 of 22) -20594 NM_001289968 5532 Hs.500067 NM_021132 HPRD:00235 PPP3CB CALNA2|CALNB|CNA2|PP2Bbeta protein phosphatase 3, catalytic subunit, beta isozyme protein-coding Atac153_MAPQ30_peak_2964 chr17 79065402 79065402 + 3.15725 NA intron (NM_006340, intron 6 of 14) intron (NM_006340, intron 6 of 14) 33771 NR_030394 724027 NR_030394 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA Atac153_MAPQ30_peak_3603 chr2 88484954 88484954 + 3.15725 NA exon (NM_018271, exon 7 of 8) exon (NM_018271, exon 7 of 8) 12296 NM_018271 55258 Hs.739080 NM_018271 HPRD:07715 THNSL2 SOFAT|THS2|TSH2 threonine synthase-like 2 (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_4688 chr3 50660803 50660803 + 3.15725 NA intron (NM_001243925, intron 2 of 10) intron (NM_001243925, intron 2 of 10) 6241 NM_001243925 7867 Hs.234521 NM_004635 HPRD:03678 MAPKAPK3 3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MK-3 mitogen-activated protein kinase-activated protein kinase 3 protein-coding Atac153_MAPQ30_peak_3041 chr18 29848415 29848415 + 3.15725 NA exon (NM_022751, exon 6 of 6) exon (NM_022751, exon 6 of 6) 78428 NM_005925 4225 Hs.194777 NM_005925 HPRD:02667 MEP1B - meprin A, beta protein-coding Atac153_MAPQ30_peak_5759 chr6 111389171 111389171 + 3.15725 NA Intergenic Intergenic -19610 NM_018593 117247 Hs.591327 NM_018593 HPRD:09613 SLC16A10 MCT10|PRO0813|TAT1 solute carrier family 16 (aromatic amino acid transporter), member 10 protein-coding Atac153_MAPQ30_peak_2446 chr16 25178529 25178529 + 3.15725 NA intron (NM_001032391, intron 5 of 8) intron (NM_001032391, intron 5 of 8) -18176 NR_039998 100506655 Hs.657576 NR_039998 ENSG00000260034 LCMT1-AS2 - LCMT1 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_3015 chr18 11126124 11126124 + 3.15725 NA intron (NM_022068, intron 1 of 51) intron (NM_022068, intron 1 of 51) 22637 NM_022068 63895 Hs.436902 NM_022068 HPRD:07636 PIEZO2 C18orf30|C18orf58|DA3|DA5|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo-type mechanosensitive ion channel component 2 protein-coding Atac153_MAPQ30_peak_641 chr10 3159814 3159814 + 3.15725 NA intron (NM_001242339, intron 16 of 23) intron (NM_001242339, intron 16 of 23) -23979 NR_038284 100507034 Hs.665365 NR_038284 ENSG00000237399 PITRM1-AS1 - PITRM1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1618 chr12 108529265 108529265 + 3.15725 NA intron (NM_014653, intron 1 of 8) MIRb|SINE|MIR 5754 NM_014653 9671 Hs.143591 NM_014653 HPRD:17196 WSCD2 - WSC domain containing 2 protein-coding Atac153_MAPQ30_peak_7220 chrX 133718323 133718323 + 3.15725 NA intron (NM_021796, intron 2 of 2) intron (NM_021796, intron 2 of 2) 34269 NR_038998 100506757 Hs.130961 NR_038998 LINC00629 - long intergenic non-protein coding RNA 629 ncRNA Atac153_MAPQ30_peak_342 chr1 116256298 116256298 + 3.15725 NA intron (NM_001232, intron 8 of 10) intron (NM_001232, intron 8 of 10) 55128 NM_001232 845 Hs.57975 NM_001232 HPRD:00256 CASQ2 PDIB2 calsequestrin 2 (cardiac muscle) protein-coding Atac153_MAPQ30_peak_4638 chr3 39338256 39338256 + 3.15725 NA Intergenic Intergenic -15030 NM_001171174 1524 Hs.78913 NM_001337 HPRD:03277 CX3CR1 CCRL1|CMKBRL1|CMKDR1|GPR13|GPRV28|V28 chemokine (C-X3-C motif) receptor 1 protein-coding Atac153_MAPQ30_peak_3427 chr2 15922688 15922688 + 3.15725 NA Intergenic Intergenic 91782 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LOC101926966 - uncharacterized LOC101926966 ncRNA Atac153_MAPQ30_peak_3309 chr19 42435491 42435491 + 3.15725 NA Intergenic MIRb|SINE|MIR 28037 NM_006423 10567 Hs.11417 NM_006423 HPRD:05375 RABAC1 PRA1|PRAF1|YIP3 Rab acceptor 1 (prenylated) protein-coding Atac153_MAPQ30_peak_1871 chr13 111824179 111824179 + 3.15725 NA intron (NM_001113511, intron 3 of 19) MLT1A0|LTR|ERVL-MaLR -14994 NM_001113513 8874 Hs.508738 NM_003899 HPRD:05688 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor (GEF) 7 protein-coding Atac153_MAPQ30_peak_4631 chr3 38078701 38078701 + 3.15725 NA Intergenic Intergenic -1995 NM_007335 9940 Hs.714499 NM_007335 HPRD:07234 DLEC1 CFAP81|DLC1|F56 deleted in lung and esophageal cancer 1 protein-coding Atac153_MAPQ30_peak_1228 chr11 65655072 65655072 + 3.15725 NA exon (NM_004214, exon 3 of 10) exon (NM_004214, exon 3 of 10) 938 NM_004214 9158 Hs.7768 NM_004214 HPRD:08492 FIBP FGFIBP|FIBP-1 fibroblast growth factor (acidic) intracellular binding protein protein-coding Atac153_MAPQ30_peak_2047 chr14 96564280 96564280 + 3.15725 NA Intergenic Intergenic 58619 NM_001282464 56967 Hs.6434 NM_020215 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding Atac153_MAPQ30_peak_6903 chrX 9293947 9293947 + 3.15725 NA Intergenic Intergenic -137388 NM_001139468 6907 Hs.495656 NM_005647 HPRD:02183 TBL1X EBI|SMAP55|TBL1 transducin (beta)-like 1X-linked protein-coding Atac153_MAPQ30_peak_1370 chr11 125087227 125087227 + 3.15725 NA intron (NM_022062, intron 1 of 12) intron (NM_022062, intron 1 of 12) 52668 NM_022062 63876 Hs.278564 NM_022062 HPRD:17857 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding Atac153_MAPQ30_peak_3947 chr2 240051979 240051979 + 3.15725 NA intron (NM_006037, intron 11 of 26) intron (NM_006037, intron 11 of 26) -44357 NR_039643 100616493 NR_039643 MIR4441 - microRNA 4441 ncRNA Atac153_MAPQ30_peak_3706 chr2 126711837 126711837 + 3.15725 NA Intergenic L2c|LINE|L2 -701674 NM_001256584 2995 Hs.59138 NM_002101 HPRD:00193 GYPC CD236|CD236R|GE|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding Atac153_MAPQ30_peak_3825 chr2 200094655 200094655 + 3.15725 NA Intergenic HERVL18-int|LTR|ERVL 228164 NM_001172509 23314 Hs.516617 NM_015265 HPRD:12178 SATB2 GLSS SATB homeobox 2 protein-coding Atac153_MAPQ30_peak_1455 chr12 7293745 7293745 + 3.15725 NA intron (NM_014718, intron 8 of 17) intron (NM_014718, intron 8 of 17) 10778 NM_014718 9746 Hs.535378 NM_014718 HPRD:16725 CLSTN3 CDHR14|CSTN3|alcbeta calsyntenin 3 protein-coding Atac153_MAPQ30_peak_3347 chr19 53400440 53400440 + 3.15725 NA Intergenic Intergenic -5841 NM_207333 162967 Hs.369632 NM_207333 HPRD:18506 ZNF320 ZFPL zinc finger protein 320 protein-coding Atac153_MAPQ30_peak_2875 chr17 55914427 55914427 + 3.15725 NA Intergenic Intergenic 13006 NM_016070 51649 Hs.5836 NM_016070 MRPS23 HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding Atac153_MAPQ30_peak_6072 chr7 88449871 88449871 + 3.15725 NA intron (NM_181646, intron 1 of 3) intron (NM_181646, intron 1 of 3) -24840 NM_152706 219557 Hs.112877 NM_152706 HPRD:14507 C7orf62 - chromosome 7 open reading frame 62 protein-coding Atac153_MAPQ30_peak_4302 chr21 43752316 43752316 + 3.15725 NA Intergenic MER34A|LTR|ERV1 -16610 NM_003226 7033 Hs.82961 NM_003226 HPRD:02797 TFF3 ITF|P1B|TFI trefoil factor 3 (intestinal) protein-coding Atac153_MAPQ30_peak_6234 chr8 228043 228043 + 3.15725 NA Intergenic Intergenic 45493 NM_001287254 169270 Hs.591388 NM_173539 HPRD:11731 ZNF596 - zinc finger protein 596 protein-coding Atac153_MAPQ30_peak_6557 chr8 143750341 143750341 + 3.15725 NA intron (NM_003724, intron 1 of 2) intron (NM_003724, intron 1 of 2) 1071 NM_003724 8629 Hs.535903 NM_003724 JRK JH8|jerky Jrk homolog (mouse) protein-coding Atac153_MAPQ30_peak_6373 chr8 48782473 48782473 + 3.15725 NA intron (NM_001081640, intron 40 of 84) L1MA3|LINE|L1 90270 NM_006904 5591 Hs.491682 NM_006904 HPRD:02941 PRKDC DNA-PKcs|DNAPK|DNPK1|HYRC|HYRC1|XRCC7|p350 protein kinase, DNA-activated, catalytic polypeptide protein-coding Atac153_MAPQ30_peak_4130 chr20 45000510 45000510 + 3.15725 NA exon (NM_133171, exon 17 of 22) exon (NM_133171, exon 17 of 22) -7413 NM_173073 51006 Hs.593344 NM_015945 HPRD:15371 SLC35C2 BA394O2.1|C20orf5|CGI-15|OVCOV1 solute carrier family 35 (GDP-fucose transporter), member C2 protein-coding Atac153_MAPQ30_peak_2836 chr17 43012092 43012092 + 3.15725 NA promoter-TSS (NR_106841) promoter-TSS (NR_106841) -43 NR_106841 102466734 NR_106841 MIR6783 hsa-mir-6783 microRNA 6783 ncRNA Atac153_MAPQ30_peak_3493 chr2 31741195 31741195 + 3.15725 NA Intergenic L2a|LINE|L2 64845 NM_000348 6716 Hs.458345 NM_000348 SRD5A2 - steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2) protein-coding Atac153_MAPQ30_peak_5199 chr4 185935213 185935213 + 3.15725 NA Intergenic Intergenic -4782 NM_001300782 391723 Hs.531242 NM_001029887 ENSG00000187821 HELT HCM1228|HESL|Mgn|bHLHb44 helt bHLH transcription factor protein-coding Atac153_MAPQ30_peak_2553 chr16 69536130 69536130 + 3.15725 NA Intergenic Intergenic 63641 NR_031719 100302119 NR_031719 miRBase:MI0007259 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA Atac153_MAPQ30_peak_5193 chr4 182069815 182069815 + 3.15725 NA intron (NR_033918, intron 2 of 2) intron (NR_033918, intron 2 of 2) 10487 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA Atac153_MAPQ30_peak_697 chr10 27836504 27836504 + 3.15725 NA Intergenic L2a|LINE|L2 43401 NM_001256412 22931 Hs.406799 NM_021252 HPRD:03731 RAB18 RAB18LI1|WARBM3 RAB18, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_7229 chrX 136167650 136167650 + 3.15725 NA Intergenic Intergenic -53817 NM_054021 83550 Hs.350569 NM_054021 HPRD:02315 GPR101 GPCR6 G protein-coupled receptor 101 protein-coding Atac153_MAPQ30_peak_6062 chr7 75617767 75617767 + 3.15725 NA exon (NM_031925, exon 5 of 12) exon (NM_031925, exon 5 of 12) 6225 NM_031925 83862 Hs.488835 NM_031925 TMEM120A NET29|TMPIT transmembrane protein 120A protein-coding Atac153_MAPQ30_peak_4695 chr3 52088539 52088539 + 3.15725 NA intron (NM_001947, intron 1 of 2) intron (NM_001947, intron 1 of 2) 1922 NM_001947 1849 Hs.591664 NM_001947 HPRD:04125 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding Atac153_MAPQ30_peak_3381 chr2 2707904 2707904 + 3.15725 NA Intergenic Intergenic -372859 NM_015025 23040 Hs.434418 NM_015025 HPRD:14797 MYT1L NZF1|ZC2HC4B myelin transcription factor 1-like protein-coding Atac153_MAPQ30_peak_1397 chr11 131336323 131336323 + 3.15725 NA intron (NM_001048209, intron 1 of 7) MIR|SINE|MIR 74438 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA Atac153_MAPQ30_peak_4185 chr20 56619669 56619669 + 3.15725 NA Intergenic Intergenic -106314 NM_178456 128602 Hs.43977 NM_178456 HPRD:12787 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding Atac153_MAPQ30_peak_1900 chr14 24773172 24773172 + 3.15725 NA intron (NM_001286367, intron 7 of 9) intron (NM_001286367, intron 7 of 9) 4112 NM_001286367 161424 Hs.708040 NM_174913 HPRD:12643 NOP9 C14orf21 NOP9 nucleolar protein protein-coding Atac153_MAPQ30_peak_3480 chr2 29216975 29216975 + 3.15725 NA intron (NM_199280, intron 1 of 19) intron (NM_199280, intron 1 of 19) 12811 NM_199280 165186 Hs.525977 NM_199280 HPRD:14110 FAM179A - family with sequence similarity 179, member A protein-coding Atac153_MAPQ30_peak_4219 chr20 62507829 62507829 + 3.15725 NA intron (NR_045090, intron 4 of 6) intron (NR_045090, intron 4 of 6) 11248 NM_001243892 7165 Hs.473296 NM_003288 HPRD:11947 TPD52L2 D54 tumor protein D52-like 2 protein-coding Atac153_MAPQ30_peak_4147 chr20 48890587 48890587 + 3.15725 NA intron (NM_001278655, intron 1 of 3) intron (NM_001278655, intron 1 of 3) 6564 NM_001278655 100506115 Hs.235484 NM_001278655 LINC01272 - long intergenic non-protein coding RNA 1272 protein-coding Atac153_MAPQ30_peak_2429 chr16 19877059 19877059 + 3.15725 NA intron (NM_016235, intron 2 of 3) L1M5|LINE|L1 19092 NM_016235 51704 Hs.148685 NM_016235 HPRD:16177 GPRC5B RAIG-2|RAIG2 G protein-coupled receptor, class C, group 5, member B protein-coding Atac153_MAPQ30_peak_242 chr1 45503304 45503304 + 3.15725 NA intron (NM_020883, intron 8 of 13) intron (NM_020883, intron 8 of 13) 25499 NR_036510 7389 Hs.78601 NM_000374 HPRD:01441 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding Atac153_MAPQ30_peak_1070 chr11 8104549 8104549 + 3.15725 NA intron (NM_177972, intron 1 of 11) intron (NM_177972, intron 1 of 11) 1640 NM_177972 7275 Hs.568986 NM_003320 HPRD:03121 TUB rd5 tubby bipartite transcription factor protein-coding Atac153_MAPQ30_peak_5648 chr6 35045298 35045298 + 3.15725 NA intron (NM_015245, intron 13 of 23) intron (NM_015245, intron 13 of 23) 63889 NM_001261818 6954 Hs.435371 NM_018679 HPRD:01749 TCP11 D6S230E|FPPR t-complex 11, testis-specific protein-coding Atac153_MAPQ30_peak_408 chr1 160343515 160343515 + 3.15725 NA TTS (NM_005598) TTS (NM_005598) 6654 NM_005598 4807 Hs.30956 NM_005598 HPRD:01212 NHLH1 HEN1|NSCL|NSCL1|bHLHa35 nescient helix loop helix 1 protein-coding Atac153_MAPQ30_peak_6534 chr8 141378256 141378256 + 3.15725 NA intron (NM_031466, intron 8 of 22) intron (NM_031466, intron 8 of 22) 89605 NM_001160372 83696 Hs.654911 NM_031466 HPRD:18136 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|TRS120 trafficking protein particle complex 9 protein-coding Atac153_MAPQ30_peak_5308 chr5 55201863 55201863 + 3.15725 NA intron (NM_001297572, intron 8 of 10) intron (NM_001297572, intron 8 of 10) 52713 NM_001242639 133396 Hs.55378 NM_139017 HPRD:17145 IL31RA CRL|CRL3|GLM-R|GLMR|GPL|IL-31RA|PLCA2|PRO21384|hGLM-R interleukin 31 receptor A protein-coding Atac153_MAPQ30_peak_1694 chr12 124940139 124940139 + 3.15725 NA intron (NM_001077261, intron 8 of 47) intron (NM_001077261, intron 8 of 47) 111871 NM_006312 9612 Hs.137510 NM_006312 HPRD:02910 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding Atac153_MAPQ30_peak_3475 chr2 28634367 28634367 + 3.15725 NA intron (NM_005253, intron 3 of 3) MIRb|SINE|MIR -16828 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA Atac153_MAPQ30_peak_5456 chr5 153473485 153473485 + 3.15725 NA Intergenic Intergenic 54966 NM_001135037 4238 Hs.432818 NM_005927 HPRD:02731 MFAP3 - microfibrillar-associated protein 3 protein-coding Atac153_MAPQ30_peak_3342 chr19 51630308 51630308 + 3.15725 NA exon (NM_001198558, exon 4 of 7) exon (NM_001198558, exon 4 of 7) 2171 NM_014441 27180 Hs.245828 NM_014441 HPRD:16133 SIGLEC9 CD329|CDw329|FOAP-9|OBBP-LIKE|siglec-9 sialic acid binding Ig-like lectin 9 protein-coding Atac153_MAPQ30_peak_4893 chr3 156175775 156175775 + 3.15725 NA intron (NM_172160, intron 4 of 13) intron (NM_172160, intron 4 of 13) -11081 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4012 chr20 17767851 17767851 + 3.15725 NA Intergenic LTR16E1|LTR|ERVL 87258 NM_001014977 140836 Hs.115366 NM_178477 HPRD:12759 BANF2 BAF-L|BAF2|BAFL|C20orf179 barrier to autointegration factor 2 protein-coding Atac153_MAPQ30_peak_2272 chr15 79134931 79134931 + 3.15725 NA Intergenic Intergenic -30192 NM_001265603 10933 Hs.374503 NM_006791 HPRD:09532 MORF4L1 Eaf3|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding Atac153_MAPQ30_peak_675 chr10 15679086 15679086 + 3.15725 NA intron (NM_001291494, intron 12 of 28) AluSz|SINE|Alu 83248 NM_001291494 8516 Hs.171311 NM_003638 ITGA8 - integrin, alpha 8 protein-coding Atac153_MAPQ30_peak_2445 chr16 25091984 25091984 + 3.15725 NA Intergenic LOR1-int|LTR|ERV1 30892 NR_120306 102723510 Hs.569596 NR_120306 LCMT1-AS1 - LCMT1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4623 chr3 36965118 36965118 + 3.15725 NA intron (NM_014831, intron 1 of 22) MER83A-int|LTR|ERV1 21430 NM_014831 9881 Hs.170999 NM_014831 ENSG00000168016 TRANK1 LBA1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding Atac153_MAPQ30_peak_2940 chr17 75227582 75227582 + 3.15725 NA Intergenic Intergenic 46287 NM_001144001 6397 Hs.464184 NM_003003 HPRD:03295 SEC14L1 PRELID4A|SEC14L SEC14-like 1 (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5650 chr6 35269011 35269011 + 3.15725 NA intron (NM_022047, intron 1 of 10) intron (NM_022047, intron 1 of 10) 3416 NM_022047 50619 Hs.15476 NM_022047 HPRD:10869 DEF6 IBP|SLAT|SWAP70L differentially expressed in FDCP 6 homolog (mouse) protein-coding Atac153_MAPQ30_peak_3722 chr2 129322666 129322666 + 3.15725 NA Intergenic ERVL-E-int|LTR|ERVL -246495 NM_004807 9394 Hs.512841 NM_004807 HPRD:07274 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding Atac153_MAPQ30_peak_5025 chr4 10188644 10188644 + 3.15725 NA Intergenic Intergenic -70071 NM_017491 9948 Hs.128548 NM_005112 HPRD:09199 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding Atac153_MAPQ30_peak_349 chr1 117564488 117564488 + 3.15725 NA exon (NM_004258, exon 7 of 10) exon (NM_004258, exon 7 of 10) 20116 NM_001256109 9398 Hs.654598 NM_004258 HPRD:05154 CD101 EWI-101|IGSF2|V7 CD101 molecule protein-coding Atac153_MAPQ30_peak_3068 chr18 43748129 43748129 + 3.15725 NA Intergenic Intergenic -5859 NM_001008239 147339 Hs.116486 NM_145055 HPRD:12690 C18orf25 ARKL1|RNF111L1 chromosome 18 open reading frame 25 protein-coding Atac153_MAPQ30_peak_5637 chr6 32085817 32085817 + 3.15725 NA intron (NM_004381, intron 11 of 17).4 intron (NM_004381, intron 11 of 17).4 -8666 NM_019105 7148 Hs.485104 NM_019105 HPRD:02993 TNXB EDS3|HXBL|TENX|TN-X|TNX|TNXB1|TNXB2|TNXBS|XB|XBS tenascin XB protein-coding Atac153_MAPQ30_peak_2515 chr16 56239487 56239487 + 3.15725 NA intron (NM_138736, intron 2 of 7) intron (NM_138736, intron 2 of 7) -11050 NR_026889 26077 Hs.721567 NR_026889 ENSG00000261439 DKFZP434H168 - uncharacterized LOC26077 ncRNA Atac153_MAPQ30_peak_1308 chr11 108938200 108938200 + 3.15725 NA Intergenic L1M4b|LINE|L1 -354646 NM_207645 399947 Hs.172982 NM_207645 HPRD:14218 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding Atac153_MAPQ30_peak_177 chr1 33603098 33603098 + 3.15725 NA Intergenic Intergenic 44573 NM_018207 55223 Hs.656006 NM_018207 HPRD:07697 TRIM62 DEAR1 tripartite motif containing 62 protein-coding Atac153_MAPQ30_peak_4617 chr3 34336971 34336971 + 3.15725 NA Intergenic Intergenic 496908 NM_001162429 10015 Hs.475896 NM_013374 HPRD:06425 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding Atac153_MAPQ30_peak_2151 chr15 45028237 45028237 + 3.15725 NA promoter-TSS (NM_001301144) promoter-TSS (NM_001301144) -323 NM_001301144 140691 Hs.745248 NM_080745 HPRD:11518 TRIM69 HSD-34|HSD34|RNF36|Trif tripartite motif containing 69 protein-coding Atac153_MAPQ30_peak_3390 chr2 3699592 3699592 + 3.15725 NA Intergenic Intergenic -6194 NM_018436 55821 Hs.97899 NM_018436 HPRD:10642 ALLC ALC allantoicase protein-coding Atac153_MAPQ30_peak_3792 chr2 172160084 172160084 + 3.15725 NA Intergenic MLT1A0|LTR|ERVL-MaLR -72260 NM_001136554 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled-like kinase 1 protein-coding Atac153_MAPQ30_peak_140 chr1 23238618 23238618 + 3.15725 NA intron (NM_004442, intron 14 of 15) intron (NM_004442, intron 14 of 15) -48899 NR_036214 100422914 NR_036214 miRBase:MI0015860 MIR4253 - microRNA 4253 ncRNA Atac153_MAPQ30_peak_3320 chr19 46309233 46309233 + 3.15725 NA intron (NM_030785, intron 2 of 5) MLT1L|LTR|ERVL-MaLR 9372 NM_030785 81492 Hs.146544 NM_030785 HPRD:09611 RSPH6A RSHL1|RSP4|RSP6|RSPH4B radial spoke head 6 homolog A (Chlamydomonas) protein-coding Atac153_MAPQ30_peak_7215 chrX 131819495 131819495 + 3.15725 NA intron (NM_001077188, intron 4 of 5) MARNA|DNA|TcMar-Mariner 17825 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_546 chr1 224820536 224820536 + 3.15725 NA intron (NM_152495, intron 1 of 5) intron (NM_152495, intron 1 of 5) 16357 NM_152495 149111 Hs.731723 NM_152495 HPRD:08799 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding Atac153_MAPQ30_peak_4777 chr3 100241775 100241775 + 3.15725 NA intron (NM_018004, intron 1 of 5) intron (NM_018004, intron 1 of 5) 30312 NM_018004 55076 Hs.658956 NM_018004 HPRD:07647 TMEM45A DERP7 transmembrane protein 45A protein-coding Atac153_MAPQ30_peak_6026 chr7 57456740 57456740 + 3.15725 NA Intergenic L2a|LINE|L2 -15991 NR_036102 100422939 NR_036102 miRBase:MI0014173 MIR3147 - microRNA 3147 ncRNA Atac153_MAPQ30_peak_6044 chr7 68149169 68149169 + 3.15725 NA Intergenic AluSz|SINE|Alu 663929 NR_120514 102723427 Hs.583491 NR_120514 LOC102723427 - uncharacterized LOC102723427 ncRNA Atac153_MAPQ30_peak_7264 chrX 147620031 147620031 + 3.15725 NA intron (NM_001169122, intron 1 of 19) MER5A1|DNA|hAT-Charlie 37892 NM_001169122 2334 Hs.496911 NM_002025 HPRD:02397 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family, member 2 protein-coding Atac153_MAPQ30_peak_1543 chr12 57666905 57666905 + 3.15725 NA intron (NM_014925, intron 12 of 21) intron (NM_014925, intron 12 of 21) -21929 NM_145064 246329 Hs.417595 NM_145064 HPRD:11606 STAC3 NAM SH3 and cysteine rich domain 3 protein-coding Atac153_MAPQ30_peak_3286 chr19 35581598 35581598 + 3.15725 NA intron (NR_024561, intron 1 of 3) MIR|SINE|MIR 15577 NR_024561 100128675 Hs.633989 NR_024561 ENSG00000227392 HPN-AS1 - HPN antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5032 chr4 13161036 13161036 + 3.15725 NA Intergenic L2a|LINE|L2 324953 NM_004249 9364 Hs.656060 NM_004249 HPRD:06699 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_709 chr10 33583600 33583600 + 3.15725 NA intron (NM_001024628, intron 2 of 11) intron (NM_001024628, intron 2 of 11) 40233 NM_003873 8829 Hs.131704 NM_003873 HPRD:03642 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding Atac153_MAPQ30_peak_5299 chr5 37790863 37790863 + 3.15725 NA Intergenic Intergenic 44061 NM_001278098 2668 Hs.248114 NM_000514 HPRD:02906 GDNF ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding Atac153_MAPQ30_peak_1281 chr11 78834081 78834081 + 3.15725 NA intron (NM_001098816, intron 4 of 33) intron (NM_001098816, intron 4 of 33) 279072 NR_030598 100126333 NR_030598 miRBase:MI0005543 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA Atac153_MAPQ30_peak_85 chr1 15127057 15127057 + 3.15725 NA intron (NM_201628, intron 1 of 14) AluJb|SINE|Alu -123568 NM_001018000 23254 Hs.368823 NM_015209 HPRD:11122 KAZN KAZ kazrin, periplakin interacting protein protein-coding Atac153_MAPQ30_peak_3714 chr2 128309309 128309309 + 3.15725 NA intron (NM_001080527, intron 1 of 46) intron (NM_001080527, intron 1 of 46) 15931 NM_001080527 4648 Hs.154578 NM_001080527 ENSG00000169994 MYO7B - myosin VIIB protein-coding Atac153_MAPQ30_peak_3851 chr2 213797644 213797644 + 3.15725 NA Intergenic MLT2B4|LTR|ERVL -6584 NR_039936 100616472 NR_039936 MIR4776-2 - microRNA 4776-2 ncRNA Atac153_MAPQ30_peak_1087 chr11 11575523 11575523 + 3.15725 NA intron (NM_198516, intron 1 of 10) intron (NM_198516, intron 1 of 10) 68038 NM_198516 374378 Hs.655152 NM_198516 HPRD:13564 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding Atac153_MAPQ30_peak_2328 chr15 98402016 98402016 + 3.15725 NA intron (NR_024172, intron 1 of 2) intron (NR_024172, intron 1 of 2) 15643 NR_024172 91948 Hs.130423 NR_024172 ENSG00000251209 LINC00923 - long intergenic non-protein coding RNA 923 ncRNA Atac153_MAPQ30_peak_2091 chr14 105654906 105654906 + 3.15725 NA Intergenic AluSx3|SINE|Alu -7246 NM_177533 256281 Hs.526432 NM_177533 HPRD:14847 NUDT14 UGPP|UGPPase nudix (nucleoside diphosphate linked moiety X)-type motif 14 protein-coding Atac153_MAPQ30_peak_58 chr1 9355156 9355156 + 3.15725 NA intron (NM_025106, intron 1 of 2) MIR3|SINE|MIR 2215 NM_025106 80176 Hs.8261 NM_025106 HPRD:18106 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding Atac153_MAPQ30_peak_4660 chr3 45586107 45586107 + 3.15725 NA intron (NM_015340, intron 21 of 21) MIR|SINE|MIR -35070 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_668 chr10 12939062 12939062 + 3.15725 NA 3' UTR (NM_031455, exon 3 of 3) 3' UTR (NM_031455, exon 3 of 3) 63929 NR_027322 283070 Hs.600547 NR_027322 LOC283070 - uncharacterized LOC283070 ncRNA Atac153_MAPQ30_peak_2214 chr15 67754068 67754068 + 3.15725 NA intron (NR_040051, intron 3 of 5) MIRc|SINE|MIR 59243 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4637 chr3 38859281 38859281 + 3.15725 NA Intergenic Intergenic -23780 NM_001293306 6336 Hs.250443 NM_006514 HPRD:09188 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium channel, voltage-gated, type X, alpha subunit protein-coding Atac153_MAPQ30_peak_321 chr1 110857525 110857525 + 3.15725 NA intron (NR_036595, intron 2 of 3) intron (NR_036595, intron 2 of 3) 24268 NR_036595 440600 Hs.649375 NR_036595 ENSG00000227963 LOC440600 - uncharacterized LOC440600 ncRNA Atac153_MAPQ30_peak_4902 chr3 162607096 162607096 + 3.15725 NA Intergenic AluJb|SINE|Alu 413993 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA Atac153_MAPQ30_peak_6821 chr9 132051702 132051702 + 3.15725 NA Intergenic Intergenic 7007 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA Atac153_MAPQ30_peak_3571 chr2 71099312 71099312 + 3.15725 NA Intergenic L1M5|LINE|L1 -28408 NM_012476 25806 Hs.249170 NM_012476 HPRD:05051 VAX2 DRES93 ventral anterior homeobox 2 protein-coding Atac153_MAPQ30_peak_3008 chr18 8829770 8829770 + 3.15725 NA intron (NM_015210, intron 16 of 16) intron (NM_015210, intron 16 of 16) 112401 NM_015210 23255 Hs.707920 NM_015210 HPRD:11110 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding Atac153_MAPQ30_peak_247 chr1 46908003 46908003 + 3.15725 NA intron (NR_045483, intron 7 of 8) intron (NR_045483, intron 7 of 8) 7373 NR_121680 101929651 Hs.638707 NR_121680 ENSG00000224863 LINC01398 - long intergenic non-protein coding RNA 1398 ncRNA Atac153_MAPQ30_peak_3310 chr19 42572896 42572896 + 3.15725 NA Intergenic Intergenic -2929 NM_001301030 2901 Hs.367799 NM_002088 HPRD:02614 GRIK5 EAA2|GRIK2|GluK5|KA2 glutamate receptor, ionotropic, kainate 5 protein-coding Atac153_MAPQ30_peak_2247 chr15 75198451 75198451 + 3.15725 NA intron (NM_020447, intron 2 of 4) intron (NM_020447, intron 2 of 4) 1011 NM_020447 57184 Hs.367690 NM_020447 HPRD:12667 FAM219B C15orf17 family with sequence similarity 219, member B protein-coding Atac153_MAPQ30_peak_1415 chr11 134425673 134425673 + 3.15725 NA Intergenic Intergenic 119297 NR_033852 283177 Hs.504390 NR_033852 LOC283177 - uncharacterized LOC283177 ncRNA Atac153_MAPQ30_peak_6427 chr8 97156351 97156351 + 3.15725 NA 3' UTR (NM_001001557, exon 2 of 2) 3' UTR (NM_001001557, exon 2 of 2) 16669 NM_001001557 392255 Hs.492277 NM_001001557 HPRD:11002 GDF6 BMP-13|BMP13|CDMP2|KFM|KFS|KFS1|KFSL|LCA17|MCOP4|MCOPCB6|SCDO4|SGM1 growth differentiation factor 6 protein-coding Atac153_MAPQ30_peak_4481 chr22 46349858 46349858 + 3.15725 NA intron (NM_058238, intron 1 of 3) L1MB5|LINE|L1 23150 NM_058238 7477 Hs.512714 NM_058238 HPRD:03573 WNT7B - wingless-type MMTV integration site family, member 7B protein-coding Atac153_MAPQ30_peak_1409 chr11 133768884 133768884 + 3.15725 NA promoter-TSS (NR_039846) promoter-TSS (NR_039846) -408 NR_039846 100616119 NR_039846 miRBase:MI0017330 MIR4697 - microRNA 4697 ncRNA Atac153_MAPQ30_peak_1689 chr12 124386959 124386959 + 3.15725 NA intron (NM_207437, intron 55 of 77) intron (NM_207437, intron 55 of 77) 70204 NM_025140 80212 Hs.713131 NM_025140 HPRD:16919 CCDC92 - coiled-coil domain containing 92 protein-coding Atac153_MAPQ30_peak_3471 chr2 27714579 27714579 + 3.15725 NA TTS (NM_022823) TTS (NM_022823) -1901 NM_015662 26160 Hs.127401 NM_015662 HPRD:09576 IFT172 NPHP17|SLB|SRTD10|osm-1|wim intraflagellar transport 172 protein-coding Atac153_MAPQ30_peak_4791 chr3 112984642 112984642 + 3.15725 NA intron (NM_033254, intron 4 of 19) MER45A|DNA|hAT-Tip100 53267 NM_033254 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding Atac153_MAPQ30_peak_5022 chr4 10084551 10084551 + 3.15725 NA intron (NM_005112, intron 7 of 11) intron (NM_005112, intron 7 of 11) -4235 NR_036090 100423011 NR_036090 MIR3138 - microRNA 3138 ncRNA Atac153_MAPQ30_peak_2335 chr15 99462607 99462607 + 3.15725 NA intron (NM_001291858, intron 10 of 20) intron (NM_001291858, intron 10 of 20) 86278 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I-like protein-coding Atac153_MAPQ30_peak_6939 chrX 19476067 19476067 + 3.15725 NA intron (NM_001001671, intron 5 of 28) MER20|DNA|hAT-Charlie 57312 NM_001001671 389840 Hs.713701 NM_001001671 HPRD:14359 MAP3K15 ASK3|bA723P2.3 mitogen-activated protein kinase kinase kinase 15 protein-coding Atac153_MAPQ30_peak_6562 chr8 144574656 144574656 + 3.15725 NA intron (NM_015117, intron 4 of 11) intron (NM_015117, intron 4 of 11) 48964 NM_015117 23144 Hs.521915 NM_015117 HPRD:15697 ZC3H3 ZC3HDC3 zinc finger CCCH-type containing 3 protein-coding Atac153_MAPQ30_peak_7077 chrX 68057631 68057631 + 3.15725 NA intron (NM_004429, intron 1 of 4) intron (NM_004429, intron 1 of 4) 8791 NM_004429 1947 Hs.144700 NM_004429 HPRD:02072 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin-B1 protein-coding Atac153_MAPQ30_peak_497 chr1 204973217 204973217 + 3.15725 NA intron (NM_001005388, intron 27 of 29) intron (NM_001005388, intron 27 of 29) -39123 NM_005076 6900 Hs.519220 NM_005076 HPRD:01826 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 (axonal) protein-coding Atac153_MAPQ30_peak_7084 chrX 68450191 68450191 + 3.15725 NA Intergenic Intergenic 50791 NR_103715 100996279 NR_103715 ENSG00000215162 LINC00269 CXorf62|NCRNA00269 long intergenic non-protein coding RNA 269 ncRNA Atac153_MAPQ30_peak_304 chr1 94070459 94070459 + 3.15725 NA intron (NM_001261408, intron 5 of 13) intron (NM_001261408, intron 5 of 13) 9243 NM_001261410 8412 Hs.36958 NM_003567 HPRD:05268 BCAR3 NSP2|SH2D3B breast cancer anti-estrogen resistance 3 protein-coding Atac153_MAPQ30_peak_820 chr10 80149581 80149581 + 3.15725 NA Intergenic L2b|LINE|L2 122496 NR_073447 414243 Hs.55047 NR_073447 ENSG00000227136 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA Atac153_MAPQ30_peak_5311 chr5 56258163 56258163 + 3.15725 NA Intergenic LTR33A_|LTR|ERVL -10206 NM_152622 166968 Hs.657594 NM_152622 HPRD:08199 MIER3 - mesoderm induction early response 1, family member 3 protein-coding Atac153_MAPQ30_peak_3179 chr19 1426306 1426306 + 3.15725 NA intron (NM_170711, intron 7 of 12) intron (NM_170711, intron 7 of 12) -12057 NM_001018 6209 Hs.406683 NM_001018 HPRD:01613 RPS15 RIG|S15 ribosomal protein S15 protein-coding Atac153_MAPQ30_peak_4854 chr3 134586470 134586470 + 3.15725 NA intron (NM_004441, intron 1 of 15) intron (NM_004441, intron 1 of 15) 72371 NM_004441 2047 Hs.116092 NM_004441 HPRD:02790 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding Atac153_MAPQ30_peak_2482 chr16 33951414 33951414 + 3.15725 NA Intergenic Intergenic 11089 NR_038368 649159 Hs.532675 NM_001040069 ENSG00000256642 LINC00273 NCRNA00273|TOP long intergenic non-protein coding RNA 273 ncRNA Atac153_MAPQ30_peak_4091 chr20 37399773 37399773 + 3.15725 NA intron (NM_024855, intron 8 of 8) intron (NM_024855, intron 8 of 8) 22676 NM_024855 79913 Hs.371585 NM_024855 HPRD:08575 ACTR5 Arp5|INO80M ARP5 actin-related protein 5 homolog (yeast) protein-coding Atac153_MAPQ30_peak_6331 chr8 28181741 28181741 + 3.15725 NA intron (NM_006228, intron 1 of 3) intron (NM_006228, intron 1 of 3) 7092 NM_006228 5368 Hs.88218 NM_006228 HPRD:03268 PNOC PPNOC prepronociceptin protein-coding Atac153_MAPQ30_peak_1036 chr11 1084438 1084438 + 3.15725 NA intron (NM_002457, intron 19 of 49) intron (NM_002457, intron 19 of 49) 9563 NM_002457 4583 Hs.315 NM_002457 HPRD:11828 MUC2 MLP|MUC-2|SMUC mucin 2, oligomeric mucus/gel-forming protein-coding Atac153_MAPQ30_peak_2892 chr17 62118006 62118006 + 3.15725 NA Intergenic Intergenic -20012 NM_001099787 3384 Hs.431460 NM_000873 HPRD:00888 ICAM2 CD102 intercellular adhesion molecule 2 protein-coding Atac153_MAPQ30_peak_1063 chr11 6661674 6661674 + 3.15725 NA exon (NM_003737, exon 2 of 21) exon (NM_003737, exon 2 of 21) 15406 NM_003737 8642 Hs.199850 NM_003737 HPRD:04341 DCHS1 CDH19|CDH25|CDHR6|FIB1|PCDH16|VMLDS1 dachsous cadherin-related 1 protein-coding Atac153_MAPQ30_peak_3279 chr19 33070706 33070706 + 3.15725 NA Intergenic AluSz|SINE|Alu -1388 NM_004708 9141 Hs.443831 NM_004708 HPRD:06843 PDCD5 TFAR19 programmed cell death 5 protein-coding Atac153_MAPQ30_peak_4707 chr3 53293022 53293022 + 3.15725 NA Intergenic MER21A|LTR|ERVL -2892 NR_047580 7086 Hs.89643 NM_001064 HPRD:06001 TKT HEL107|TK|TKT1 transketolase protein-coding Atac153_MAPQ30_peak_168 chr1 30851222 30851222 + 3.15725 NA Intergenic Intergenic -340397 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6828 chr9 134281399 134281399 + 3.15725 NA Intergenic MIRb|SINE|MIR -24078 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline-rich coiled-coil 2B protein-coding Atac153_MAPQ30_peak_1470 chr12 25088171 25088171 + 3.15725 NA intron (NM_005504, intron 1 of 10) intron (NM_005504, intron 1 of 10) 14222 NM_001178091 586 Hs.438993 NM_005504 HPRD:00216 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino-acid transaminase 1, cytosolic protein-coding Atac153_MAPQ30_peak_5757 chr6 110720584 110720584 + 3.15725 NA intron (NM_004032, intron 3 of 3) intron (NM_004032, intron 3 of 3) 16169 NM_003649 8528 Hs.591348 NM_003649 HPRD:00498 DDO DASOX|DDO-1|DDO-2 D-aspartate oxidase protein-coding Atac153_MAPQ30_peak_97 chr1 16771822 16771822 + 3.15725 NA intron (NM_018090, intron 2 of 7) MER20|DNA|hAT-Charlie 4655 NM_001145278 55707 Hs.437385 NM_018090 HPRD:07674 NECAP2 - NECAP endocytosis associated 2 protein-coding Atac153_MAPQ30_peak_2818 chr17 39791956 39791956 + 3.15725 NA intron (NR_033415, intron 2 of 10) intron (NR_033415, intron 2 of 10) 4495 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P - keratin 42 pseudogene pseudo Atac153_MAPQ30_peak_6618 chr9 36726504 36726504 + 3.15725 NA Intergenic Intergenic 97092 NR_039686 100616289 NR_039686 miRBase:MI0016827 MIR4475 - microRNA 4475 ncRNA Atac153_MAPQ30_peak_990 chr10 130329288 130329288 + 3.15725 NA Intergenic Intergenic 245074 NR_120619 101927381 Hs.523342 NR_120619 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA Atac153_MAPQ30_peak_3961 chr2 242173819 242173819 + 3.15725 NA intron (NM_203346, intron 23 of 27) intron (NM_203346, intron 23 of 27) 38427 NM_203346 3069 Hs.471851 NM_005336 HPRD:00813 HDLBP HBP|PRO2900|VGL high density lipoprotein binding protein protein-coding Atac153_MAPQ30_peak_82 chr1 15034558 15034558 + 3.15725 NA intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) 109345 NM_201628 23254 Hs.368823 NM_015209 HPRD:11122 KAZN KAZ kazrin, periplakin interacting protein protein-coding Atac153_MAPQ30_peak_3660 chr2 106730241 106730241 + 3.15725 NA intron (NR_045607, intron 8 of 13) intron (NR_045607, intron 8 of 13) 25096 NM_001253876 80146 Hs.469561 NM_025076 HPRD:15642 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding Atac153_MAPQ30_peak_32 chr1 5500907 5500907 + 3.15725 NA Intergenic L1MA10|LINE|L1 -123224 NR_039612 100616489 NR_039612 miRBase:MI0016753 MIR4417 - microRNA 4417 ncRNA Atac153_MAPQ30_peak_7091 chrX 70432984 70432984 + 3.15725 NA intron (NR_001568, intron 3 of 3) MIR|SINE|MIR -2078 NM_001097642 2705 Hs.333303 NM_000166 HPRD:02367 GJB1 CMTX|CMTX1|CX32 gap junction protein, beta 1, 32kDa protein-coding Atac153_MAPQ30_peak_1592 chr12 96631622 96631622 + 3.15725 NA intron (NM_005230, intron 2 of 4) intron (NM_005230, intron 2 of 4) 43415 NM_005230 2004 Hs.46523 NM_005230 ELK3 ERP|NET|SAP2 ELK3, ETS-domain protein (SRF accessory protein 2) protein-coding Atac153_MAPQ30_peak_2235 chr15 73315002 73315002 + 3.15725 NA Intergenic Intergenic -29823 NM_002499 4756 Hs.388613 NM_002499 HPRD:03549 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding Atac153_MAPQ30_peak_4089 chr20 36870500 36870500 + 3.15725 NA intron (NM_001029864, intron 2 of 13) MER96|DNA|hAT -18077 NR_104170 149684 Hs.628250 NR_104170 ENSG00000101425 LOC149684 - uncharacterized LOC149684 ncRNA Atac153_MAPQ30_peak_374 chr1 152586429 152586429 + 3.15725 NA exon (NM_178433, exon 1 of 1) exon (NM_178433, exon 1 of 1) 142 NM_178433 353143 Hs.553715 NM_178433 HPRD:13974 LCE3B LEP14 late cornified envelope 3B protein-coding Atac153_MAPQ30_peak_4005 chr20 15897389 15897389 + 3.15725 NA intron (NM_080676, intron 10 of 16) intron (NM_080676, intron 10 of 16) 656690 NM_024704 55614 Hs.101774 NM_024704 HPRD:10731 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding Atac153_MAPQ30_peak_2586 chr16 81465095 81465095 + 3.15725 NA Intergenic Intergenic -13680 NM_198390 80790 Hs.594095 NM_030629 HPRD:10839 CMIP TCMIP c-Maf inducing protein protein-coding Atac153_MAPQ30_peak_1477 chr12 28738956 28738956 + 3.15725 NA Intergenic Intergenic 328823 NM_018318 55297 Hs.653125 NM_018318 HPRD:16905 CCDC91 p56 coiled-coil domain containing 91 protein-coding Atac153_MAPQ30_peak_3351 chr19 54707317 54707317 + 3.15725 NA intron (NM_001013, intron 3 of 4) intron (NM_001013, intron 3 of 4) 2591 NM_001013 6203 Hs.467284 NM_001013 HPRD:04696 RPS9 S9 ribosomal protein S9 protein-coding Atac153_MAPQ30_peak_1828 chr13 70136927 70136927 + 3.12270 NA Intergenic L1P4e|LINE|L1 340449 NR_125752 103689913 Hs.585628 NR_125752 LINC00383 - long intergenic non-protein coding RNA 383 ncRNA Atac153_MAPQ30_peak_6068 chr7 78339437 78339437 + 3.11894 NA intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) -298867 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_3674 chr2 111477417 111477417 + 3.11101 NA Intergenic Intergenic -12733 NM_001142807 55289 Hs.253320 NM_018308 HPRD:12418 ACOXL - acyl-CoA oxidase-like protein-coding Atac153_MAPQ30_peak_904 chr10 109775543 109775543 + 3.11101 NA intron (NR_125760, intron 4 of 4) L1M4c|LINE|L1 53508 NR_125760 103695365 Hs.648991 NR_125760 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA Atac153_MAPQ30_peak_6408 chr8 80379096 80379096 + 3.11101 NA Intergenic MER4A1|LTR|ERV1 -143953 NM_007029 11075 Hs.521651 NM_007029 HPRD:09003 STMN2 SCG10|SCGN10 stathmin 2 protein-coding Atac153_MAPQ30_peak_3449 chr2 22972908 22972908 + 3.11101 NA Intergenic Intergenic 213557 NR_110577 102723362 Hs.502887 NR_110577 LOC102723362 - uncharacterized LOC102723362 ncRNA Atac153_MAPQ30_peak_604 chr1 237947552 237947552 + 3.11101 NA exon (NM_001035, exon 90 of 105) exon (NM_001035, exon 90 of 105) -77923 NR_027247 100130331 Hs.661736 NR_027247 ENSG00000237250 LOC100130331 - POTE ankyrin domain family, member F pseudogene pseudo Atac153_MAPQ30_peak_912 chr10 113679436 113679436 + 3.11101 NA Intergenic Intergenic 264101 NM_001244949 57678 Hs.42586 NM_020918 HPRD:03865 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding Atac153_MAPQ30_peak_4650 chr3 41650314 41650314 + 3.11101 NA intron (NM_017886, intron 31 of 36) intron (NM_017886, intron 31 of 36) 353346 NM_017886 54986 Hs.656192 NM_017886 HPRD:07928 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding Atac153_MAPQ30_peak_1151 chr11 38041286 38041286 + 3.04273 NA Intergenic L1PA13|LINE|L1 626620 NR_120555 103312105 Hs.641711 NR_120554 LOC103312105 - uncharacterized LOC103312105 ncRNA Atac153_MAPQ30_peak_1786 chr13 30618000 30618000 + 3.04273 NA Intergenic MLT1F2|LTR|ERVL-MaLR 107332 NR_033889 440131 Hs.132371 NM_001010918 LINC00544 - long intergenic non-protein coding RNA 544 ncRNA Atac153_MAPQ30_peak_1922 chr14 53745460 53745460 + 3.04273 NA Intergenic HERVL18-int|LTR|ERVL 125388 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA Atac153_MAPQ30_peak_1829 chr13 71606884 71606884 + 3.04273 NA intron (NR_047699, intron 1 of 3) L1PA14|LINE|L1 17611 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA Atac153_MAPQ30_peak_6453 chr8 107415744 107415744 + 3.04273 NA intron (NM_018002, intron 2 of 15) ERVL-B4-int|LTR|ERVL -44408 NM_001198532 55074 Hs.127286 NM_018002 HPRD:16126 OXR1 TLDC3 oxidation resistance 1 protein-coding Atac153_MAPQ30_peak_1294 chr11 88338118 88338118 + 3.04273 NA exon (NM_000842, exon 5 of 9) exon (NM_000842, exon 5 of 9) 100374 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4794 chr3 114649850 114649850 + 3.04273 NA intron (NM_015642, intron 2 of 9) intron (NM_015642, intron 2 of 9) -30381 NR_121662 26137 Hs.202577 NM_015642 HPRD:05822 ZBTB20 DPZF|HOF|ODA-8S|ZNF288 zinc finger and BTB domain containing 20 protein-coding Atac153_MAPQ30_peak_5367 chr5 107836493 107836493 + 3.04273 NA Intergenic MSTA-int|LTR|ERVL-MaLR -118694 NM_001163315 64839 Hs.657225 NM_022824 HPRD:10950 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine-rich repeat protein 17 protein-coding Atac153_MAPQ30_peak_2505 chr16 51205790 51205790 + 3.00744 NA Intergenic MIR3|SINE|MIR -20607 NM_002968 6299 Hs.135787 NM_002968 HPRD:03742 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt-like transcription factor 1 protein-coding Atac153_MAPQ30_peak_2701 chr17 10147695 10147695 + 3.00744 NA Intergenic Intergenic -45827 NM_201433 8522 Hs.462214 NM_003644 HPRD:16011 GAS7 MLL/GAS7 growth arrest-specific 7 protein-coding Atac153_MAPQ30_peak_5426 chr5 139689543 139689543 + 3.00744 NA Intergenic L2a|LINE|L2 -6854 NM_002622 5201 Hs.483564 NM_002622 HPRD:05357 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding Atac153_MAPQ30_peak_3796 chr2 173371879 173371879 + 3.00744 NA TTS (NM_000210) TTS (NM_000210) -48222 NR_103731 5163 Hs.470633 NM_002610 PDK1 - pyruvate dehydrogenase kinase, isozyme 1 protein-coding Atac153_MAPQ30_peak_325 chr1 112541842 112541842 + 3.00744 NA TTS (NM_001270945) TTS (NM_001270945) 8652 NM_001270945 643355 Hs.279714 NM_001270945 LOC643355 - uncharacterized LOC643355 protein-coding Atac153_MAPQ30_peak_2345 chr15 101859177 101859177 + 3.00744 NA intron (NM_138319, intron 17 of 20) intron (NM_138319, intron 17 of 20) -9668 NR_045387 100507472 Hs.498494 NR_045387 LOC100507472 - uncharacterized LOC100507472 ncRNA Atac153_MAPQ30_peak_4887 chr3 142829396 142829396 + 3.00744 NA Intergenic MER5A1|DNA|hAT-Charlie -9222 NM_004267 9435 Hs.8786 NM_004267 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 protein-coding Atac153_MAPQ30_peak_1064 chr11 7176464 7176464 + 3.00744 NA Intergenic Intergenic 66299 NM_014469 27288 Hs.121605 NM_014469 HPRD:05672 RBMXL2 HNRNPG-T|HNRNPGT|HNRPGT RNA binding motif protein, X-linked-like 2 protein-coding Atac153_MAPQ30_peak_6718 chr9 98324088 98324088 + 3.00744 NA Intergenic Intergenic -44841 NM_001083603 5727 Hs.494538 NM_000264 HPRD:03200 PTCH1 BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11 patched 1 protein-coding Atac153_MAPQ30_peak_3705 chr2 125884458 125884458 + 3.00744 NA Intergenic L1PB1|LINE|L1 1101594 NM_130773 129684 Hs.660653 NM_130773 HPRD:16732 CNTNAP5 caspr5 contactin associated protein-like 5 protein-coding Atac153_MAPQ30_peak_6374 chr8 49229262 49229262 + 3.00744 NA Intergenic AmnSINE1|SINE|Deu -234865 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA Atac153_MAPQ30_peak_5275 chr5 14705955 14705955 + 3.00744 NA 3' UTR (NM_054027, exon 12 of 12) 3' UTR (NM_054027, exon 12 of 12) -6848 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA Atac153_MAPQ30_peak_6509 chr8 136484942 136484942 + 2.97993 NA intron (NM_006558, intron 1 of 8) intron (NM_006558, intron 1 of 8) 15226 NM_006558 10656 Hs.444558 NM_006558 HPRD:10007 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH domain containing, RNA binding, signal transduction associated 3 protein-coding Atac153_MAPQ30_peak_411 chr1 160733632 160733632 + 2.97993 NA Intergenic ERVL-B4-int|LTR|ERVL 24785 NM_001282593 57823 Hs.517265 NM_021181 HPRD:09432 SLAMF7 19A|CD319|CRACC|CS1 SLAM family member 7 protein-coding Atac153_MAPQ30_peak_6432 chr8 98021134 98021134 + 2.97993 NA intron (NM_016134, intron 5 of 7) intron (NM_016134, intron 5 of 7) 269042 NM_033512 85453 Hs.173094 NM_033512 HPRD:15576 TSPYL5 - TSPY-like 5 protein-coding Atac153_MAPQ30_peak_4167 chr20 54064869 54064869 + 2.97993 NA Intergenic Intergenic -21134 NR_110064 101927796 Hs.737040 NR_110064 ENSG00000224008 LINC01441 - long intergenic non-protein coding RNA 1441 ncRNA Atac153_MAPQ30_peak_5944 chr7 28530792 28530792 + 2.97993 NA intron (NM_182898, intron 2 of 10) L2b|LINE|L2 55558 NM_004904 9586 Hs.437075 NM_004904 HPRD:09896 CREB5 CRE-BPA cAMP responsive element binding protein 5 protein-coding Atac153_MAPQ30_peak_2987 chr18 4450016 4450016 + 2.97993 NA intron (NM_001242761, intron 1 of 11) intron (NM_001242761, intron 1 of 11) 5250 NM_001242761 9229 Hs.594640 NM_004746 HPRD:09260 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1|hGKAP discs, large (Drosophila) homolog-associated protein 1 protein-coding Atac153_MAPQ30_peak_4293 chr21 42655081 42655081 + 2.97993 NA TTS (NM_138992) TTS (NM_138992) -33580 NM_058186 54097 Hs.473877 NM_058186 FAM3B 2-21|C21orf11|C21orf76|ORF9|PANDER family with sequence similarity 3, member B protein-coding Atac153_MAPQ30_peak_742 chr10 47087315 47087315 + 2.97993 NA exon (NM_005972, exon 3 of 3) exon (NM_005972, exon 3 of 3) 590 NM_001278795 100996758 Hs.524719 NM_001278795 LOC100996758 - neuropeptide Y receptor type 4-like protein-coding Atac153_MAPQ30_peak_5476 chr5 165554593 165554593 + 2.97993 NA Intergenic L1M2|LINE|L1 798782 NR_108020 102557615 NR_108020 CTB-7E3.1 - uncharacterized LOC102557615 ncRNA Atac153_MAPQ30_peak_5355 chr5 87565338 87565338 + 2.97993 NA promoter-TSS (NM_153354) promoter-TSS (NM_153354) 505 NR_039994 100505894 Hs.559426 NR_039993 ENSG00000247828 TMEM161B-AS1 linc-POLR3G-8 TMEM161B antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5291 chr5 33060687 33060687 + 2.97993 NA Intergenic Intergenic 113138 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LOC340113 - uncharacterized LOC340113 ncRNA Atac153_MAPQ30_peak_5465 chr5 155085801 155085801 + 2.97993 NA Intergenic MLT1B|LTR|ERVL-MaLR -667966 NM_172244 6444 Hs.387207 NM_000337 HPRD:03246 SGCD 35DAG|CMD1L|DAGD|SG-delta|SGCDP|SGD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) protein-coding Atac153_MAPQ30_peak_3048 chr18 34007487 34007487 + 2.97993 NA intron (NM_001281739, intron 3 of 23) intron (NM_001281739, intron 3 of 23) 129828 NM_001281739 80206 Hs.630884 NM_025135 HPRD:16894 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding Atac153_MAPQ30_peak_6641 chr9 77306063 77306063 + 2.97993 NA Intergenic Intergenic -101494 NR_106746 102466967 NR_106746 MIR6130 hsa-mir-6130 microRNA 6130 ncRNA Atac153_MAPQ30_peak_2898 chr17 63690047 63690047 + 2.97993 NA intron (NM_001037325, intron 3 of 6) MLT1A0|LTR|ERVL-MaLR -132307 NM_004655 8313 Hs.156527 NM_004655 HPRD:04935 AXIN2 AXIL|ODCRCS axin 2 protein-coding Atac153_MAPQ30_peak_4656 chr3 45129558 45129558 + 2.97993 NA intron (NM_022842, intron 8 of 8) intron (NM_022842, intron 8 of 8) 58356 NM_022842 64866 Hs.476093 NM_022842 HPRD:16696 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding Atac153_MAPQ30_peak_5953 chr7 31986572 31986572 + 2.97993 NA intron (NM_001191058, intron 3 of 18) L1MCa|LINE|L1 123902 NM_001191057 5137 Hs.728862 NM_005020 HPRD:04287 PDE1C Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C, calmodulin-dependent 70kDa protein-coding Atac153_MAPQ30_peak_4228 chr21 11122608 11122608 + 2.96568 NA Intergenic Intergenic -23671 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding Atac153_MAPQ30_peak_6676 chr9 89775560 89775560 + 2.95433 NA TTS (NM_001001709) TTS (NM_001001709) 12001 NM_001001709 401535 Hs.657740 NM_001001709 HPRD:16988 C9orf170 - chromosome 9 open reading frame 170 protein-coding Atac153_MAPQ30_peak_5785 chr6 133920973 133920973 + 2.95433 NA intron (NR_109982, intron 4 of 8) intron (NR_109982, intron 4 of 8) -221312 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA Atac153_MAPQ30_peak_4747 chr3 67754227 67754227 + 2.91377 NA intron (NR_109992, intron 3 of 6) intron (NR_109992, intron 3 of 6) 49106 NR_109992 101927111 Hs.518057 NR_109992 SUCLG2-AS1 - SUCLG2 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_5348 chr5 80408488 80408488 + 2.91377 NA exon (NM_006909, exon 14 of 27) exon (NM_006909, exon 14 of 27) -92974 NR_002754 26829 NR_002754 ENSG00000199347 RNU5E-1 RNU5E|U5E RNA, U5E small nuclear 1 snRNA Atac153_MAPQ30_peak_855 chr10 89836992 89836992 + 2.91377 NA Intergenic Charlie15a|DNA|hAT-Charlie 213797 NM_000314 5728 Hs.500466 NM_000314 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|TEP1 phosphatase and tensin homolog protein-coding Atac153_MAPQ30_peak_5069 chr4 44817056 44817056 + 2.91377 NA Intergenic L1PA11|LINE|L1 -88405 NM_001270881 132789 Hs.21398 NM_138335 HPRD:13594 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding Atac153_MAPQ30_peak_3846 chr2 207712662 207712662 + 2.91377 NA Intergenic Intergenic -64630 NR_036077 100422993 NR_036077 MIR3130-1 MIR3130-3 microRNA 3130-1 ncRNA Atac153_MAPQ30_peak_3661 chr2 107845325 107845325 + 2.91377 NA Intergenic L1MEg1|LINE|L1 -341762 NM_032528 84620 Hs.98265 NM_032528 HPRD:12237 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 protein-coding Atac153_MAPQ30_peak_1152 chr11 40137123 40137123 + 2.84882 NA exon (NM_020929, exon 5 of 5) exon (NM_020929, exon 5 of 5) 177557 NR_047674 57689 Hs.745123 NM_020929 HPRD:12303 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding Atac153_MAPQ30_peak_5942 chr7 27988061 27988061 + 2.84882 NA intron (NM_175061, intron 2 of 4) intron (NM_175061, intron 2 of 4) 208347 NM_006024 8887 Hs.34576 NM_006024 HPRD:05618 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 (human T-cell leukemia virus type I) binding protein 1 protein-coding Atac153_MAPQ30_peak_3492 chr2 31597022 31597022 + 2.84882 NA intron (NM_000379, intron 15 of 35) L2b|LINE|L2 40589 NM_000379 7498 Hs.250 NM_000379 HPRD:06363 XDH XO|XOR xanthine dehydrogenase protein-coding Atac153_MAPQ30_peak_1906 chr14 33635746 33635746 + 2.84882 NA intron (NM_001164749, intron 2 of 11) L2b|LINE|L2 227287 NM_173159 64067 Hs.657892 NM_022123 HPRD:11400 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding Atac153_MAPQ30_peak_589 chr1 232727157 232727157 + 2.84882 NA Intergenic Intergenic -75914 NM_020808 57568 Hs.745009 NM_020808 HPRD:15346 SIPA1L2 SPAL2 signal-induced proliferation-associated 1 like 2 protein-coding Atac153_MAPQ30_peak_4795 chr3 116169762 116169762 + 2.84882 NA Intergenic Intergenic -5377 NM_002338 4045 Hs.26409 NM_002338 HPRD:09128 LSAMP IGLON3|LAMP limbic system-associated membrane protein protein-coding Atac153_MAPQ30_peak_839 chr10 86053506 86053506 + 2.84882 NA non-coding (NR_038220, exon 6 of 6) non-coding (NR_038220, exon 6 of 6) 13770 NR_038220 170425 Hs.434131 NR_038220 ENSG00000229404 LINC00858 - long intergenic non-protein coding RNA 858 ncRNA Atac153_MAPQ30_peak_974 chr10 127702416 127702416 + 2.84882 NA 3' UTR (NM_001288973, exon 23 of 23) 3' UTR (NM_001288973, exon 23 of 23) -40574 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2453 chr16 26393659 26393659 + 2.84882 NA Intergenic MIRb|SINE|MIR -684560 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding Atac153_MAPQ30_peak_5739 chr6 99518374 99518374 + 2.84295 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -122492 NR_103836 26235 Hs.536850 NM_012160 HPRD:05738 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine-rich repeat protein 4 protein-coding Atac153_MAPQ30_peak_7302 chrY 13464541 13464541 + 2.79902 NA Intergenic LSAU|Satellite|Satellite 1068848 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_4364 chr22 26253038 26253038 + 2.78650 NA intron (NM_032608, intron 21 of 43) intron (NM_032608, intron 21 of 43) 114918 NM_032608 84700 Hs.417959 NM_032608 HPRD:09529 MYO18B - myosin XVIIIB protein-coding Atac153_MAPQ30_peak_5203 chr4 187509948 187509948 + 2.78650 NA exon (NM_005245, exon 27 of 27) exon (NM_005245, exon 27 of 27) -33411 NM_005958 4543 Hs.243467 NM_005958 HPRD:02812 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding Atac153_MAPQ30_peak_2337 chr15 99478703 99478703 + 2.76998 NA intron (NM_001291858, intron 17 of 20) intron (NM_001291858, intron 17 of 20) 70182 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I-like protein-coding Atac153_MAPQ30_peak_2748 chr17 19470194 19470194 + 2.76998 NA intron (NM_018242, intron 13 of 16) intron (NM_018242, intron 13 of 16) 9321 NR_003025 677885 Hs.658450 NR_003025 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA Atac153_MAPQ30_peak_257 chr1 49932988 49932988 + 2.76998 NA intron (NR_046839, intron 2 of 3) intron (NR_046839, intron 2 of 3) 4769 NR_046839 100874313 Hs.551277 NR_046839 AGBL4-IT1 - AGBL4 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_2968 chr17 79630200 79630200 + 2.76998 NA Intergenic LTR39-int|LTR|ERV1 3418 NM_001039842 339229 Hs.405942 NM_001039842 ENSG00000204237 OXLD1 C17orf90 oxidoreductase-like domain containing 1 protein-coding Atac153_MAPQ30_peak_1642 chr12 111536699 111536699 + 2.76998 NA intron (NM_015267, intron 1 of 21) L2b|LINE|L2 64871 NM_015267 23316 Hs.124953 NM_015267 HPRD:10851 CUX2 CDP2|CUTL2 cut-like homeobox 2 protein-coding Atac153_MAPQ30_peak_3392 chr2 6010024 6010024 + 2.76998 NA Intergenic Intergenic -62795 NR_026832 150622 Hs.560891 NR_026832 LINC01105 - long intergenic non-protein coding RNA 1105 ncRNA Atac153_MAPQ30_peak_1467 chr12 19151325 19151325 + 2.76998 NA Intergenic L1MEf|LINE|L1 -131301 NM_019012 54477 Hs.188614 NM_019012 HPRD:09684 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing, family A member 5 protein-coding Atac153_MAPQ30_peak_3889 chr2 226190467 226190467 + 2.76998 NA Intergenic Intergenic -75135 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding Atac153_MAPQ30_peak_2513 chr16 55120661 55120661 + 2.76998 NA Intergenic MER20|DNA|hAT-Charlie 155550 NM_001252197 10265 Hs.435730 NM_005853 HPRD:08395 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding Atac153_MAPQ30_peak_5653 chr6 36288521 36288521 + 2.76998 NA intron (NM_001010903, intron 10 of 11) intron (NM_001010903, intron 10 of 11) 16141 NM_001010903 389384 Hs.162104 NM_001010903 HPRD:16824 C6orf222 - chromosome 6 open reading frame 222 protein-coding Atac153_MAPQ30_peak_1181 chr11 46568965 46568965 + 2.76998 NA intron (NM_001300731, intron 3 of 16) intron (NM_001300731, intron 3 of 16) 43949 NM_017749 55626 Hs.654644 NM_017749 HPRD:10975 AMBRA1 DCAF3|WDR94 autophagy/beclin-1 regulator 1 protein-coding Atac153_MAPQ30_peak_781 chr10 71581685 71581685 + 2.76998 NA intron (NM_080800, intron 1 of 37) intron (NM_080800, intron 1 of 37) 20041 NM_080805 1305 Hs.695934 NM_005203 HPRD:00383 COL13A1 COLXIIIA1 collagen, type XIII, alpha 1 protein-coding Atac153_MAPQ30_peak_2975 chr17 80441702 80441702 + 2.76998 NA intron (NM_001038618, intron 8 of 10) intron (NM_001038618, intron 8 of 10) 25162 NM_001083608 26502 Hs.256526 NM_012336 HPRD:05637 NARF IOP2 nuclear prelamin A recognition factor protein-coding Atac153_MAPQ30_peak_684 chr10 20124013 20124013 + 2.76998 NA intron (NM_001282736, intron 1 of 12) L2c|LINE|L2 18641 NM_032812 84898 Hs.99472 NM_032812 HPRD:08440 PLXDC2 TEM7R plexin domain containing 2 protein-coding Atac153_MAPQ30_peak_4238 chr21 19655373 19655373 + 2.76998 NA intron (NM_002772, intron 21 of 24) intron (NM_002772, intron 21 of 24) 37181 NM_001204174 140578 Hs.283725 NM_024944 HPRD:06261 CHODL C21orf68|MT75 chondrolectin protein-coding Atac153_MAPQ30_peak_2749 chr17 19567150 19567150 + 2.76998 NA intron (NM_001031806, intron 7 of 10) intron (NM_001031806, intron 7 of 10) 15086 NM_001031806 224 Hs.499886 NM_000382 HPRD:07188 ALDH3A2 ALDH10|FALDH|SLS aldehyde dehydrogenase 3 family, member A2 protein-coding Atac153_MAPQ30_peak_3340 chr19 51345598 51345598 + 2.76998 NA Intergenic LTR40a|LTR|ERVL -10819 NM_001277081 55554 Hs.567535 NM_017509 HPRD:07490 KLK15 ACO|HSRNASPH kallikrein-related peptidase 15 protein-coding Atac153_MAPQ30_peak_154 chr1 27103665 27103665 + 2.76998 NA intron (NM_006015, intron 19 of 19) AluJb|SINE|Alu -10789 NM_017837 55650 Hs.259605 NM_017837 HPRD:07912 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis, class V protein-coding Atac153_MAPQ30_peak_5407 chr5 133780625 133780625 + 2.76998 NA Intergenic MLT1F|LTR|ERVL-MaLR -9887 NR_105044 102546229 NR_105044 LOC102546229 - uncharacterized LOC102546229 ncRNA Atac153_MAPQ30_peak_2014 chr14 88824926 88824926 + 2.76998 NA Intergenic Intergenic -27062 NM_018418 55812 Hs.525518 NM_018418 HPRD:15431 SPATA7 HEL-S-296|HSD-3.1|HSD3|LCA3 spermatogenesis associated 7 protein-coding Atac153_MAPQ30_peak_6155 chr7 134529413 134529413 + 2.76998 NA intron (NM_004342, intron 2 of 13) MLT1B|LTR|ERVL-MaLR -46738 NM_033139 800 Hs.490203 NM_004342 HPRD:00251 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding Atac153_MAPQ30_peak_3797 chr2 174277762 174277762 + 2.76998 NA Intergenic Intergenic 58201 NM_145810 83879 Hs.470654 NM_031942 HPRD:09874 CDCA7 JPO1 cell division cycle associated 7 protein-coding Atac153_MAPQ30_peak_486 chr1 203139283 203139283 + 2.76998 NA intron (NM_004997, intron 7 of 10) intron (NM_004997, intron 7 of 10) 5659 NM_004997 4608 Hs.927 NM_004997 HPRD:01186 MYBPH - myosin binding protein H protein-coding Atac153_MAPQ30_peak_1173 chr11 45748325 45748325 + 2.76998 NA Intergenic Intergenic 4467 NR_047569 100507384 Hs.259426 NR_047569 ENSG00000254519 LOC100507384 - uncharacterized LOC100507384 ncRNA Atac153_MAPQ30_peak_5115 chr4 83660034 83660034 + 2.76998 NA intron (NM_001037582, intron 1 of 4) MIRb|SINE|MIR 14549 NR_030301 693160 NR_030301 MIR575 MIRN575|hsa-mir-575 microRNA 575 ncRNA Atac153_MAPQ30_peak_1724 chr12 129647366 129647366 + 2.76998 NA intron (NM_133448, intron 5 of 8) MSTB|LTR|ERVL-MaLR -45780 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 LOC101927735 - uncharacterized LOC101927735 ncRNA Atac153_MAPQ30_peak_661 chr10 10487369 10487369 + 2.76998 NA intron (NR_120637, intron 1 of 3) ERVL-E-int|LTR|ERVL 16943 NR_120637 101928322 Hs.576789 NR_120637 LOC101928322 - uncharacterized LOC101928322 ncRNA Atac153_MAPQ30_peak_5880 chr7 574461 574461 + 2.76998 NA Intergenic Intergenic 14433 NR_033963 441307 Hs.521334 NR_033963 FLJ44511 - uncharacterized LOC441307 ncRNA Atac153_MAPQ30_peak_5504 chr5 173734249 173734249 + 2.76998 NA Intergenic Intergenic -29108 NR_125806 101928176 Hs.436014 NR_125806 LINC01411 - long intergenic non-protein coding RNA 1411 ncRNA Atac153_MAPQ30_peak_7180 chrX 118986173 118986173 + 2.76998 NA intron (NM_023010, intron 1 of 9) intron (NM_023010, intron 1 of 9) 818 NM_080632 65109 Hs.103832 NM_023010 HPRD:02247 UPF3B HUPF3B|MRX62|MRXS14|RENT3B|UPF3X UPF3 regulator of nonsense transcripts homolog B (yeast) protein-coding Atac153_MAPQ30_peak_3540 chr2 54292799 54292799 + 2.76998 NA Intergenic Intergenic -49611 NM_138448 98 Hs.516173 NM_138448 HPRD:00028 ACYP2 ACYM|ACYP acylphosphatase 2, muscle type protein-coding Atac153_MAPQ30_peak_3424 chr2 15072935 15072935 + 2.76998 NA Intergenic Intergenic 297720 NM_001291410 653602 Hs.657296 NM_001291410 LOC653602 - uncharacterized LOC653602 protein-coding Atac153_MAPQ30_peak_4014 chr20 18344212 18344212 + 2.76998 NA Intergenic MER1A|DNA|hAT-Charlie -15481 NR_034167 440757 Hs.120399 NM_001004344 HPRD:14632 LINC00851 DZANK1-AS1 long intergenic non-protein coding RNA 851 ncRNA Atac153_MAPQ30_peak_1000 chr10 131028040 131028040 + 2.76998 NA Intergenic Intergenic -237414 NM_002412 4255 Hs.501522 NM_002412 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding Atac153_MAPQ30_peak_3275 chr19 32081391 32081391 + 2.76998 NA intron (NM_001278577, intron 2 of 3) intron (NM_001278577, intron 2 of 3) -1796 NM_001205273 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding Atac153_MAPQ30_peak_6616 chr9 35603568 35603568 + 2.76998 NA Intergenic Intergenic -1713 NM_006285 7016 Hs.708096 NM_006285 HPRD:03470 TESK1 - testis-specific kinase 1 protein-coding Atac153_MAPQ30_peak_6971 chrX 34065820 34065820 + 2.76998 NA Intergenic Intergenic 84627 NM_203408 158724 Hs.143268 NM_203408 HPRD:10947 FAM47A - family with sequence similarity 47, member A protein-coding Atac153_MAPQ30_peak_1804 chr13 42962989 42962989 + 2.76998 NA Intergenic MIR|SINE|MIR 116700 NM_016248 11215 Hs.105105 NM_016248 HPRD:05261 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A kinase (PRKA) anchor protein 11 protein-coding Atac153_MAPQ30_peak_7205 chrX 128586641 128586641 + 2.76998 NA intron (NM_001282874, intron 23 of 24) MER103C|DNA|hAT-Charlie 70841 NM_001282874 6594 Hs.152292 NM_003069 HPRD:02055 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding Atac153_MAPQ30_peak_453 chr1 181077488 181077488 + 2.76998 NA Intergenic L3|LINE|CR1 19850 NM_016545 51278 Hs.15725 NM_016545 HPRD:06210 IER5 SBBI48 immediate early response 5 protein-coding Atac153_MAPQ30_peak_3164 chr18 76553792 76553792 + 2.76998 NA Intergenic Intergenic -186483 NM_171999 27164 Hs.700557 NM_171999 SALL3 ZNF796 spalt-like transcription factor 3 protein-coding Atac153_MAPQ30_peak_1790 chr13 33687402 33687402 + 2.76998 NA intron (NM_178006, intron 8 of 13) intron (NM_178006, intron 8 of 13) 72814 NM_001243466 90627 Hs.156551 NM_052851 HPRD:11607 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR-related lipid transfer (START) domain containing 13 protein-coding Atac153_MAPQ30_peak_1565 chr12 74061848 74061848 + 2.76998 NA Intergenic LTR48B|LTR|ERV1 508878 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LOC101928137 - uncharacterized LOC101928137 ncRNA Atac153_MAPQ30_peak_6595 chr9 17748770 17748770 + 2.76998 NA intron (NM_003026, intron 2 of 8) L2c|LINE|L2 169818 NM_003026 6456 Hs.75149 NM_003026 HPRD:05125 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3-domain GRB2-like 2 protein-coding Atac153_MAPQ30_peak_6700 chr9 95487484 95487484 + 2.76998 NA intron (NM_001003800, intron 2 of 6) intron (NM_001003800, intron 2 of 6) 39599 NM_015250 23299 Hs.436939 NM_015250 HPRD:09826 BICD2 SMALED2|bA526D8.1 bicaudal D homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_541 chr1 223603666 223603666 + 2.76998 NA Intergenic Intergenic 36951 NM_152610 164127 Hs.192090 NM_152610 HPRD:08761 CCDC185 C1orf65 coiled-coil domain containing 185 protein-coding Atac153_MAPQ30_peak_3440 chr2 19956096 19956096 + 2.76998 NA Intergenic Intergenic -112519 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA Atac153_MAPQ30_peak_4894 chr3 156341982 156341982 + 2.76998 NA Intergenic HERVL18-int|LTR|ERVL -50223 NM_015508 25976 Hs.744050 NM_015508 HPRD:18192 TIPARP ARTD14|PARP7|pART14 TCDD-inducible poly(ADP-ribose) polymerase protein-coding Atac153_MAPQ30_peak_2176 chr15 59485967 59485967 + 2.76998 NA intron (NM_004998, intron 17 of 27) L3|LINE|CR1 -13048 NM_033195 92483 Hs.307052 NM_033195 HPRD:13981 LDHAL6B LDH6B|LDHAL6|LDHL lactate dehydrogenase A-like 6B protein-coding Atac153_MAPQ30_peak_6342 chr8 37338163 37338163 + 2.76998 NA intron (NR_121620, intron 1 of 6) MIRc|SINE|MIR 13268 NR_121620 100507420 Hs.105962 NR_121620 LOC100507420 - uncharacterized LOC100507420 ncRNA Atac153_MAPQ30_peak_6734 chr9 102547381 102547381 + 2.76998 NA intron (NR_109802, intron 2 of 6) intron (NR_109802, intron 2 of 6) 34790 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA Atac153_MAPQ30_peak_5732 chr6 90321605 90321605 + 2.76998 NA intron (NM_001242811, intron 5 of 15) intron (NM_001242811, intron 5 of 15) 26611 NR_028493 57226 Hs.177275 NM_020466 HPRD:13146 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding Atac153_MAPQ30_peak_3108 chr18 51984546 51984546 + 2.76998 NA Intergenic Intergenic 97648 NM_001288982 162681 Hs.208701 NM_173529 HPRD:11334 C18orf54 LAS2 chromosome 18 open reading frame 54 protein-coding Atac153_MAPQ30_peak_1981 chr14 73299903 73299903 + 2.76998 NA intron (NM_001280542, intron 1 of 10) L2|LINE|L2 59454 NM_001280544 8110 Hs.162868 NM_012074 HPRD:03395 DPF3 BAF45C|CERD4 D4, zinc and double PHD fingers, family 3 protein-coding Atac153_MAPQ30_peak_3378 chr2 2468606 2468606 + 2.76998 NA Intergenic L2b|LINE|L2 -133561 NM_015025 23040 Hs.434418 NM_015025 HPRD:14797 MYT1L NZF1|ZC2HC4B myelin transcription factor 1-like protein-coding Atac153_MAPQ30_peak_3097 chr18 47108964 47108964 + 2.76998 NA intron (NM_006033, intron 7 of 9) intron (NM_006033, intron 7 of 9) 20537 NM_006033 9388 Hs.465102 NM_006033 HPRD:04730 LIPG EDL|EL|PRO719 lipase, endothelial protein-coding Atac153_MAPQ30_peak_2593 chr16 81941557 81941557 + 2.76998 NA intron (NM_002661, intron 16 of 32) intron (NM_002661, intron 16 of 32) 103536 NM_145168 93517 Hs.87779 NM_145168 HPRD:17118 SDR42E1 - short chain dehydrogenase/reductase family 42E, member 1 protein-coding Atac153_MAPQ30_peak_5563 chr6 3732589 3732589 + 2.76998 NA intron (NM_183373, intron 3 of 4) intron (NM_183373, intron 3 of 4) 19657 NM_183373 221749 Hs.484500 NM_183373 HPRD:12854 PXDC1 C6orf145 PX domain containing 1 protein-coding Atac153_MAPQ30_peak_3984 chr20 3262225 3262225 + 2.76998 NA intron (NM_001009984, intron 28 of 36) intron (NM_001009984, intron 28 of 36) -42338 NM_001174089 83959 Hs.105607 NM_032034 HPRD:15392 SLC4A11 BTR1|CDPD1|CHED2|NABC1|dJ794I6.2 solute carrier family 4, sodium borate transporter, member 11 protein-coding Atac153_MAPQ30_peak_5488 chr5 169065531 169065531 + 2.76998 NA intron (NM_004946, intron 1 of 51) MIR|SINE|MIR 1280 NM_004946 1794 Hs.586174 NM_004946 HPRD:09121 DOCK2 - dedicator of cytokinesis 2 protein-coding Atac153_MAPQ30_peak_1665 chr12 115619991 115619991 + 2.76998 NA Intergenic Intergenic -498022 NM_005996 6926 Hs.744016 NM_005996 HPRD:03373 TBX3 TBX3-ISO|UMS|XHL T-box 3 protein-coding Atac153_MAPQ30_peak_5839 chr6 164351063 164351063 + 2.76998 NA Intergenic MIRb|SINE|MIR 515388 NM_001301085 9444 Hs.510324 NM_006775 HPRD:06691 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing, RNA binding protein-coding Atac153_MAPQ30_peak_6430 chr8 97334648 97334648 + 2.76998 NA intron (NM_001290225, intron 8 of 10) MSTD|LTR|ERVL-MaLR 60534 NM_001290225 9791 Hs.292579 NM_014754 PTDSS1 LMHD|PSS1|PSSA phosphatidylserine synthase 1 protein-coding Atac153_MAPQ30_peak_4571 chr3 12980540 12980540 + 2.76998 NA intron (NM_014869, intron 2 of 13) intron (NM_014869, intron 2 of 13) 28658 NM_014869 9922 Hs.475506 NM_014869 HPRD:11052 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding Atac153_MAPQ30_peak_5710 chr6 57266652 57266652 + 2.76998 NA intron (NM_000947, intron 7 of 14) L1PA14|LINE|L1 84237 NM_001282487 5558 Hs.654580 NM_000947 PRIM2 PRIM2A|p58 primase, DNA, polypeptide 2 (58kDa) protein-coding Atac153_MAPQ30_peak_1343 chr11 117739014 117739014 + 2.76998 NA intron (NM_001164836, intron 1 of 9) intron (NM_001164836, intron 1 of 9) 8732 NM_001204268 100533181 Hs.744850 NM_001204268 ENSG00000255245 FXYD6-FXYD2 - FXYD6-FXYD2 readthrough protein-coding Atac153_MAPQ30_peak_4162 chr20 52024032 52024032 + 2.76998 NA intron (NM_173485, intron 2 of 2) intron (NM_173485, intron 2 of 2) -145277 NR_110051 101927770 NR_110051 ENSG00000197670 LOC101927770 - uncharacterized LOC101927770 ncRNA Atac153_MAPQ30_peak_1236 chr11 68736050 68736050 + 2.76998 NA Intergenic Intergenic 12405 NM_198923 116512 Hs.527802 NM_198923 HPRD:06250 MRGPRD MRGD|TGR7 MAS-related GPR, member D protein-coding Atac153_MAPQ30_peak_2759 chr17 21237296 21237296 + 2.76998 NA Intergenic MER21B|LTR|ERVL -42403 NM_021012 3768 Hs.200629 NM_021012 HPRD:09083 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium inwardly-rectifying channel, subfamily J, member 12 protein-coding Atac153_MAPQ30_peak_6305 chr8 21022377 21022377 + 2.76998 NA Intergenic L2a|LINE|L2 -133373 NR_104677 101929172 Hs.128668 NR_104677 ENSG00000254334 LOC101929172 - uncharacterized LOC101929172 ncRNA Atac153_MAPQ30_peak_1180 chr11 46512437 46512437 + 2.76998 NA intron (NM_001300731, intron 10 of 16) intron (NM_001300731, intron 10 of 16) -38998 NR_036117 100422827 NR_036117 MIR3160-1 - microRNA 3160-1 ncRNA Atac153_MAPQ30_peak_3136 chr18 68028182 68028182 + 2.76998 NA Intergenic MER72|LTR|ERV1 23645 NR_110764 101060542 Hs.586967 NR_110764 ENSG00000266278 LOC101060542 - uncharacterized LOC101060542 ncRNA Atac153_MAPQ30_peak_2811 chr17 37497950 37497950 + 2.76998 NA intron (NM_032875, intron 2 of 14) intron (NM_032875, intron 2 of 14) 59959 NM_001184906 84961 Hs.462946 NM_032875 HPRD:10951 FBXL20 Fbl2|Fbl20 F-box and leucine-rich repeat protein 20 protein-coding Atac153_MAPQ30_peak_3600 chr2 86716688 86716688 + 2.76998 NA exon (NM_018433, exon 23 of 26) exon (NM_018433, exon 23 of 26) 48104 NM_001146688 55818 Hs.557425 NM_018433 HPRD:11054 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine (K)-specific demethylase 3A protein-coding Atac153_MAPQ30_peak_1309 chr11 109221560 109221560 + 2.76998 NA Intergenic L2b|LINE|L2 -71286 NM_207645 399947 Hs.172982 NM_207645 HPRD:14218 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding Atac153_MAPQ30_peak_437 chr1 175561646 175561646 + 2.76998 NA intron (NM_003285, intron 1 of 22) intron (NM_003285, intron 1 of 22) 151106 NM_003285 7143 Hs.659864 NM_003285 HPRD:03589 TNR TN-R tenascin R protein-coding Atac153_MAPQ30_peak_3348 chr19 53508047 53508047 + 2.76998 NA Intergenic Intergenic -9297 NM_152473 147664 Hs.44329 NM_152473 ERVV-1 ENVV1|ERVV-2|HERV-V1 endogenous retrovirus group V, member 1 protein-coding Atac153_MAPQ30_peak_2995 chr18 7025595 7025595 + 2.76998 NA intron (NM_005559, intron 17 of 62) intron (NM_005559, intron 17 of 62) 92218 NM_005559 284217 Hs.270364 NM_005559 HPRD:01033 LAMA1 LAMA|S-LAM-alpha laminin, alpha 1 protein-coding Atac153_MAPQ30_peak_881 chr10 104125068 104125068 + 2.76998 NA intron (NM_001199379, intron 17 of 39) intron (NM_001199379, intron 17 of 39) -28799 NM_001288724 4791 Hs.73090 NM_002502 HPRD:01239 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p105|p52 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) protein-coding Atac153_MAPQ30_peak_5482 chr5 167596138 167596138 + 2.76998 NA intron (NM_001122679, intron 13 of 28) intron (NM_001122679, intron 13 of 28) 63239 NR_109894 101927862 Hs.659376 NR_109894 ENSG00000253978 CTB-178M22.2 - uncharacterized LOC101927862 ncRNA Atac153_MAPQ30_peak_6999 chrX 40498162 40498162 + 2.76998 NA intron (NM_144970, intron 3 of 6) intron (NM_144970, intron 3 of 6) 8657 NM_144970 159013 Hs.495961 NM_144970 CXorf38 - chromosome X open reading frame 38 protein-coding Atac153_MAPQ30_peak_4078 chr20 34418333 34418333 + 2.76998 NA intron (NM_016436, intron 2 of 17) L1MB3|LINE|L1 58410 NM_016436 51230 Hs.517044 NM_016436 HPRD:08514 PHF20 C20orf104|GLEA2|HCA58|NZF|TDRD20A|TZP PHD finger protein 20 protein-coding Atac153_MAPQ30_peak_2420 chr16 17155344 17155344 + 2.76998 NA Intergenic MER58A|DNA|hAT-Charlie 409394 NM_022166 64131 Hs.22907 NM_022166 HPRD:12168 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI xylosyltransferase I protein-coding Atac153_MAPQ30_peak_4609 chr3 32004146 32004146 + 2.76998 NA intron (NM_017784, intron 1 of 11) intron (NM_017784, intron 1 of 11) -19120 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding Atac153_MAPQ30_peak_1155 chr11 43042215 43042215 + 2.76998 NA Intergenic MIRc|SINE|MIR 248704 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo Atac153_MAPQ30_peak_1463 chr12 13889170 13889170 + 2.76998 NA intron (NM_000834, intron 3 of 12) intron (NM_000834, intron 3 of 12) 243852 NM_000834 2904 Hs.654430 NM_000834 GRIN2B GluN2B|MRD6|NMDAR2B|NR2B|hNR3 glutamate receptor, ionotropic, N-methyl D-aspartate 2B protein-coding Atac153_MAPQ30_peak_4441 chr22 38511306 38511306 + 2.76998 NA intron (NM_001004426, intron 13 of 15) intron (NM_001004426, intron 13 of 15) -4630 NM_025045 80115 Hs.474822 NM_025045 HPRD:07997 BAIAP2L2 - BAI1-associated protein 2-like 2 protein-coding Atac153_MAPQ30_peak_2822 chr17 40997327 40997327 + 2.76998 NA exon (NM_009590, exon 1 of 4) exon (NM_009590, exon 1 of 4) 718 NM_009590 314 Hs.143102 NM_001158 HPRD:11889 AOC2 DAO2|RAO amine oxidase, copper containing 2 (retina-specific) protein-coding Atac153_MAPQ30_peak_5339 chr5 76129460 76129460 + 2.76998 NA exon (NM_005242, exon 2 of 2) exon (NM_005242, exon 2 of 2) 14627 NM_005242 2150 Hs.744181 NM_005242 HPRD:02960 F2RL1 GPR11|PAR2 coagulation factor II (thrombin) receptor-like 1 protein-coding Atac153_MAPQ30_peak_847 chr10 87947928 87947928 + 2.76998 NA intron (NM_017551, intron 3 of 15) intron (NM_017551, intron 3 of 15) 76617 NR_029907 442911 NR_029907 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA Atac153_MAPQ30_peak_890 chr10 104603628 104603628 + 2.76998 NA Intergenic HERVK11-int|LTR|ERVK -6338 NM_000102 1586 Hs.438016 NM_000102 HPRD:01944 CYP17A1 CPT7|CYP17|P450C17|S17AH cytochrome P450, family 17, subfamily A, polypeptide 1 protein-coding Atac153_MAPQ30_peak_1548 chr12 58708401 58708401 + 2.76998 NA Intergenic Intergenic 372956 NM_033276 91419 Hs.61188 NM_033276 HPRD:17256 XRCC6BP1 KUB3 XRCC6 binding protein 1 protein-coding Atac153_MAPQ30_peak_1860 chr13 106194476 106194476 + 2.76998 NA Intergenic Intergenic -36446 NR_040247 282706 Hs.558713 NR_040247 HPRD:07597 DAOA-AS1 DAOA-AS|DAOAAS|G30 DAOA antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4468 chr22 44531881 44531881 + 2.76998 NA intron (NM_001003828, intron 7 of 13) MLT1C|LTR|ERVL-MaLR -36955 NM_001137605 64098 Hs.658995 NM_022141 HPRD:16285 PARVG - parvin, gamma protein-coding Atac153_MAPQ30_peak_6750 chr9 113020445 113020445 + 2.76998 NA Intergenic Intergenic -1525 NM_001244938 7295 Hs.435136 NM_003329 HPRD:01761 TXN TRDX|TRX|TRX1 thioredoxin protein-coding Atac153_MAPQ30_peak_2534 chr16 65768771 65768771 + 2.76998 NA Intergenic MIRb|SINE|MIR -158568 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA Atac153_MAPQ30_peak_7004 chrX 41553928 41553928 + 2.76998 NA intron (NM_005300, intron 2 of 2) intron (NM_005300, intron 2 of 2) 5702 NM_001097579 2857 Hs.495989 NM_005300 HPRD:02213 GPR34 LYPSR1 G protein-coupled receptor 34 protein-coding Atac153_MAPQ30_peak_629 chr10 389955 389955 + 2.76998 NA intron (NM_014974, intron 28 of 36) intron (NM_014974, intron 28 of 36) 164021 NM_001202468 10771 Hs.292265 NM_006624 HPRD:09830 ZMYND11 BRAM1|BS69 zinc finger, MYND-type containing 11 protein-coding Atac153_MAPQ30_peak_5601 chr6 15256410 15256410 + 2.76998 NA intron (NM_001267040, intron 1 of 17) intron (NM_001267040, intron 1 of 17) 7324 NM_001267040 3720 Hs.269059 NM_004973 HPRD:03355 JARID2 JMJ jumonji, AT rich interactive domain 2 protein-coding Atac153_MAPQ30_peak_4538 chr3 5705925 5705925 + 2.76998 NA Intergenic L1MB7|LINE|L1 -413985 NR_039953 100616334 NR_039953 miRBase:MI0017437 MIR4790 - microRNA 4790 ncRNA Atac153_MAPQ30_peak_5451 chr5 150722819 150722819 + 2.76998 NA intron (NM_181776, intron 3 of 9) intron (NM_181776, intron 3 of 9) 4332 NM_181776 153201 Hs.483877 NM_181776 HPRD:12215 SLC36A2 PAT2|TRAMD1 solute carrier family 36 (proton/amino acid symporter), member 2 protein-coding Atac153_MAPQ30_peak_3938 chr2 239031761 239031761 + 2.76998 NA intron (NM_194312, intron 5 of 8) LTR40a|LTR|ERVL -15602 NM_198582 377007 Hs.591595 NM_198582 HPRD:13472 KLHL30 - kelch-like family member 30 protein-coding Atac153_MAPQ30_peak_1899 chr14 24116903 24116903 + 2.76998 NA Intergenic Intergenic 11330 NM_005794 10202 Hs.272499 NM_005794 HPRD:07483 DHRS2 HEP27|SDR25C1 dehydrogenase/reductase (SDR family) member 2 protein-coding Atac153_MAPQ30_peak_6901 chrX 9246810 9246810 + 2.76998 NA Intergenic Intergenic -184525 NM_001139468 6907 Hs.495656 NM_005647 HPRD:02183 TBL1X EBI|SMAP55|TBL1 transducin (beta)-like 1X-linked protein-coding Atac153_MAPQ30_peak_3213 chr19 8540049 8540049 + 2.76998 NA intron (NM_001297418, intron 10 of 13) MIR|SINE|MIR 27489 NM_032152 84106 Hs.465812 NM_032152 HPRD:05926 PRAM1 PML-RAR|PRAM-1 PML-RARA regulated adaptor molecule 1 protein-coding Atac153_MAPQ30_peak_1699 chr12 125170513 125170513 + 2.76998 NA Intergenic MIR|SINE|MIR -118503 NM_001206654 9612 Hs.137510 NM_006312 HPRD:02910 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding Atac153_MAPQ30_peak_6407 chr8 79844623 79844623 + 2.76998 NA Intergenic Intergenic -126865 NM_001199887 3574 Hs.591873 NM_000880 HPRD:00892 IL7 IL-7 interleukin 7 protein-coding Atac153_MAPQ30_peak_5289 chr5 32769719 32769719 + 2.76998 NA intron (NM_000908, intron 3 of 7) intron (NM_000908, intron 3 of 7) 58281 NM_001204375 4883 Hs.13528 NM_000908 HPRD:00167 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding Atac153_MAPQ30_peak_3150 chr18 73943799 73943799 + 2.76998 NA Intergenic Intergenic 108846 NR_040034 339298 Hs.151215 NR_040034 ENSG00000263547 LOC339298 - uncharacterized LOC339298 ncRNA Atac153_MAPQ30_peak_1310 chr11 109254182 109254182 + 2.76998 NA Intergenic Intergenic -38664 NM_207645 399947 Hs.172982 NM_207645 HPRD:14218 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding Atac153_MAPQ30_peak_6969 chrX 32763024 32763024 + 2.76998 NA intron (NM_004009, intron 7 of 78) intron (NM_004009, intron 7 of 78) -332653 NM_004011 1756 Hs.495912 NM_000109 HPRD:02303 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding Atac153_MAPQ30_peak_1245 chr11 70335559 70335559 + 2.76998 NA intron (NM_012309, intron 20 of 22) intron (NM_012309, intron 20 of 22) 90947 NM_138565 2017 Hs.596164 NM_005231 HPRD:01268 CTTN EMS1 cortactin protein-coding Atac153_MAPQ30_peak_931 chr10 120738176 120738176 + 2.76998 NA Intergenic Intergenic -51052 NM_199461 340719 Hs.591918 NM_199461 HPRD:16302 NANOS1 NOS1|SPGF12 nanos homolog 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_895 chr10 106359210 106359210 + 2.76998 NA Intergenic Intergenic -41649 NM_014978 22986 Hs.671950 NM_014978 HPRD:12100 SORCS3 SORCS sortilin-related VPS10 domain containing receptor 3 protein-coding Atac153_MAPQ30_peak_6897 chrX 8372570 8372570 + 2.76998 NA Intergenic Intergenic -60301 NM_001001888 425054 Hs.279737 NM_001001888 HPRD:15646 VCX3B VCX-C|VCXC variable charge, X-linked 3B protein-coding Atac153_MAPQ30_peak_5253 chr5 9177453 9177453 + 2.76998 NA intron (NM_003966, intron 11 of 22) intron (NM_003966, intron 11 of 22) -123446 NR_039779 100616326 NR_039779 MIR4636 - microRNA 4636 ncRNA Atac153_MAPQ30_peak_3432 chr2 16366727 16366727 + 2.76998 NA Intergenic MIR3|SINE|MIR -284882 NR_110230 10408 Hs.651453 NM_006316 ENSG00000233718 MYCNOS MYCN-AS1|N-CYM|NCYM|NYCM MYCN opposite strand ncRNA Atac153_MAPQ30_peak_1969 chr14 69405160 69405160 + 2.76998 NA intron (NM_001102, intron 1 of 20) MIRb|SINE|MIR 40923 NM_001130004 87 Hs.509765 NM_001102 HPRD:00020 ACTN1 BDPLT15 actinin, alpha 1 protein-coding Atac153_MAPQ30_peak_3452 chr2 23217270 23217270 + 2.76998 NA Intergenic L2a|LINE|L2 -391028 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch-like family member 29 protein-coding Atac153_MAPQ30_peak_6138 chr7 131465924 131465924 + 2.76998 NA Intergenic Intergenic -129055 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA Atac153_MAPQ30_peak_2273 chr15 79199348 79199348 + 2.76998 NA Intergenic ERVL-E-int|LTR|ERVL 34017 NM_001265605 10933 Hs.374503 NM_006791 HPRD:09532 MORF4L1 Eaf3|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding Atac153_MAPQ30_peak_6809 chr9 129345500 129345500 + 2.76998 NA Intergenic Intergenic -31222 NM_001174147 4010 Hs.129133 NM_002316 HPRD:03986 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1, beta protein-coding Atac153_MAPQ30_peak_5665 chr6 39182332 39182332 + 2.76998 NA intron (NM_003740, intron 1 of 4) intron (NM_003740, intron 1 of 4) 14919 NM_003740 8645 Hs.444448 NM_003740 HPRD:04604 KCNK5 K2p5.1|TASK-2|TASK2 potassium channel, subfamily K, member 5 protein-coding Atac153_MAPQ30_peak_5595 chr6 13285294 13285294 + 2.76998 NA intron (NM_030948, intron 13 of 14) intron (NM_030948, intron 13 of 14) 10524 NM_001242698 100130357 Hs.657498 NM_001242698 LOC100130357 - uncharacterized LOC100130357 protein-coding Atac153_MAPQ30_peak_5641 chr6 33163338 33163338 + 2.76998 NA intron (NM_001291989, intron 6 of 8) intron (NM_001291989, intron 6 of 8) -3093 NM_001163771 1302 Hs.390171 NM_080679 HPRD:00376 COL11A2 DFNA13|DFNB53|FBCG2|HKE5|PARP|STL3 collagen, type XI, alpha 2 protein-coding Atac153_MAPQ30_peak_899 chr10 106577640 106577640 + 2.76998 NA intron (NM_014978, intron 1 of 26) MIRb|SINE|MIR -151666 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_409 chr1 160511576 160511576 + 2.76998 NA 3' UTR (NM_001184879, exon 8 of 8) 3' UTR (NM_001184879, exon 8 of 8) -18524 NM_052931 114836 Hs.492348 NM_052931 HPRD:05920 SLAMF6 CD352|KALI|KALIb|Ly108|NTB-A|NTBA|SF2000 SLAM family member 6 protein-coding Atac153_MAPQ30_peak_1471 chr12 25113342 25113342 + 2.76998 NA Intergenic L1M1|LINE|L1 -10949 NM_005504 586 Hs.438993 NM_005504 HPRD:00216 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino-acid transaminase 1, cytosolic protein-coding Atac153_MAPQ30_peak_5555 chr6 1178046 1178046 + 2.76998 NA Intergenic MER20|DNA|hAT-Charlie -76479 NR_027115 285768 Hs.209463 NR_027115 LOC285768 - uncharacterized LOC285768 ncRNA Atac153_MAPQ30_peak_2327 chr15 97410337 97410337 + 2.76998 NA Intergenic Intergenic 83658 NM_173499 145946 Hs.326528 NM_173499 HPRD:15432 SPATA8 SRG8 spermatogenesis associated 8 protein-coding Atac153_MAPQ30_peak_3921 chr2 236661674 236661674 + 2.76998 NA intron (NM_001037131, intron 6 of 17) MLT1A0|LTR|ERVL-MaLR 258941 NM_001244888 116987 Hs.435039 NM_014914 HPRD:16359 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding Atac153_MAPQ30_peak_1600 chr12 103600794 103600794 + 2.76998 NA Intergenic Intergenic 249342 NM_004316 429 Hs.703025 NM_004316 HPRD:00011 ASCL1 ASH1|HASH1|MASH1|bHLHa46 achaete-scute family bHLH transcription factor 1 protein-coding Atac153_MAPQ30_peak_273 chr1 56123597 56123597 + 2.76998 NA Intergenic Intergenic 432283 NR_039618 100616272 NR_039618 miRBase:MI0016759 MIR4422 - microRNA 4422 ncRNA Atac153_MAPQ30_peak_1284 chr11 79370372 79370372 + 2.76998 NA Intergenic Intergenic -218677 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ODZ4|TNM4|Ten-M4 teneurin transmembrane protein 4 protein-coding Atac153_MAPQ30_peak_3322 chr19 46616301 46616301 + 2.76998 NA Intergenic Intergenic 11630 NM_207393 388555 Hs.365496 NM_207393 HPRD:17140 IGFL3 UNQ483 IGF-like family member 3 protein-coding Atac153_MAPQ30_peak_5397 chr5 132485551 132485551 + 2.76998 NA Intergenic Intergenic 97889 NM_002154 3308 Hs.90093 NM_002154 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock 70kDa protein 4 protein-coding Atac153_MAPQ30_peak_1418 chr12 166522 166522 + 2.76998 NA Intergenic L1PB1|LINE|L1 -9527 NM_001170738 440073 Hs.536319 NM_015232 ENSG00000120645 IQSEC3 - IQ motif and Sec7 domain 3 protein-coding Atac153_MAPQ30_peak_1593 chr12 97137228 97137228 + 2.76998 NA Intergenic Intergenic -163773 NM_001135177 121441 Hs.270084 NM_152905 HPRD:02655 NEDD1 GCP-WD|TUBGCP7 neural precursor cell expressed, developmentally down-regulated 1 protein-coding Atac153_MAPQ30_peak_5676 chr6 40650512 40650512 + 2.76998 NA Intergenic MLT1I|LTR|ERVL-MaLR -95386 NM_020737 57497 Hs.250015 NM_020737 HPRD:17444 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding Atac153_MAPQ30_peak_4890 chr3 149788514 149788514 + 2.76998 NA Intergenic L2a|LINE|L2 99448 NR_036538 646903 Hs.632559 NR_036538 LOC646903 - uncharacterized LOC646903 ncRNA Atac153_MAPQ30_peak_1661 chr12 114605967 114605967 + 2.76998 NA Intergenic Intergenic -201791 NM_001146699 9904 Hs.7482 NM_016196 HPRD:15225 RBM19 - RNA binding motif protein 19 protein-coding Atac153_MAPQ30_peak_6235 chr8 236956 236956 + 2.76998 NA Intergenic Intergenic 54406 NM_001287254 169270 Hs.591388 NM_173539 HPRD:11731 ZNF596 - zinc finger protein 596 protein-coding Atac153_MAPQ30_peak_6457 chr8 109360743 109360743 + 2.76998 NA Intergenic L1MEd|LINE|L1 -95110 NM_014673 9694 Hs.654351 NM_014673 HPRD:09657 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding Atac153_MAPQ30_peak_7019 chrX 48371452 48371452 + 2.76998 NA intron (NM_203473, intron 7 of 13) intron (NM_203473, intron 7 of 13) 3280 NM_203474 64840 Hs.386453 NM_022825 HPRD:06680 PORCN DHOF|FODH|MG61|PORC|PPN porcupine homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_6004 chr7 50783857 50783857 + 2.76998 NA intron (NM_001001555, intron 2 of 16) L1MEc|LINE|L1 -10859 NM_001001550 2887 Hs.164060 NM_005311 HPRD:03312 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor-bound protein 10 protein-coding Atac153_MAPQ30_peak_1265 chr11 73590222 73590222 + 2.76998 NA intron (NM_001267806, intron 2 of 11) L2|LINE|L2 2208 NM_001267803 80227 Hs.525017 NM_025155 HPRD:07761 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase-associated factor 1 protein-coding Atac153_MAPQ30_peak_3813 chr2 182064566 182064566 + 2.76998 NA Intergenic MSTD|LTR|ERVL-MaLR 105813 NR_039637 100616213 NR_039637 miRBase:MI0016778 MIR4437 - microRNA 4437 ncRNA Atac153_MAPQ30_peak_4138 chr20 47158389 47158389 + 2.76998 NA Intergenic Intergenic 169735 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA Atac153_MAPQ30_peak_1026 chr10 134807527 134807527 + 2.76998 NA Intergenic Intergenic 28489 NR_046231 399829 Hs.252872 NR_046231 ENSG00000240707 LINC01168 - long intergenic non-protein coding RNA 1168 ncRNA Atac153_MAPQ30_peak_1197 chr11 60264717 60264717 + 2.76998 NA intron (NM_017716, intron 1 of 6) intron (NM_017716, intron 1 of 6) 4466 NM_017716 54860 Hs.272789 NM_017716 HPRD:08410 MS4A12 Ms4a10 membrane-spanning 4-domains, subfamily A, member 12 protein-coding Atac153_MAPQ30_peak_802 chr10 75639757 75639757 + 2.76998 NA Intergenic MIRb|SINE|MIR -5408 NM_172169 818 Hs.523045 NM_001222 HPRD:03672 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin-dependent protein kinase II gamma protein-coding Atac153_MAPQ30_peak_1700 chr12 125269136 125269136 + 2.76998 NA intron (NM_005505, intron 11 of 12) intron (NM_005505, intron 11 of 12) 79383 NM_005505 949 Hs.731377 NM_005505 HPRD:03024 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B, member 1 protein-coding Atac153_MAPQ30_peak_962 chr10 126209106 126209106 + 2.76998 NA intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) 58765 NM_001167880 64077 Hs.527748 NM_022126 HPRD:17274 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding Atac153_MAPQ30_peak_1625 chr12 108926385 108926385 + 2.76998 NA intron (NM_014706, intron 12 of 18) intron (NM_014706, intron 12 of 18) 17334 NM_007076 11153 Hs.661891 NM_007076 FICD HIP13|HYPE|UNQ3041 FIC domain containing protein-coding Atac153_MAPQ30_peak_6990 chrX 39052982 39052982 + 2.76998 NA Intergenic MIRb|SINE|MIR 133634 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA Atac153_MAPQ30_peak_1348 chr11 118818915 118818915 + 2.76998 NA Intergenic L2b|LINE|L2 -8093 NM_006760 7379 Hs.379613 NM_006760 HPRD:10295 UPK2 UP2|UPII uroplakin 2 protein-coding Atac153_MAPQ30_peak_523 chr1 213096023 213096023 + 2.76998 NA Intergenic MIR|SINE|MIR -27839 NM_001136474 79805 Hs.96885 NM_024749 HPRD:08574 VASH2 - vasohibin 2 protein-coding Atac153_MAPQ30_peak_2500 chr16 49651098 49651098 + 2.76998 NA intron (NM_015069, intron 5 of 7) intron (NM_015069, intron 5 of 7) 205551 NM_015069 23090 Hs.530930 NM_015069 HPRD:05189 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104 zinc finger protein 423 protein-coding Atac153_MAPQ30_peak_2455 chr16 26635019 26635019 + 2.76998 NA Intergenic AluJo|SINE|Alu -443200 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding Atac153_MAPQ30_peak_3749 chr2 133038398 133038398 + 2.74811 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -22856 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_1775 chr13 26508460 26508460 + 2.74562 NA intron (NM_016529, intron 33 of 36) intron (NM_016529, intron 33 of 36) 116738 NM_001007538 387914 Hs.433791 NM_001007538 HPRD:16589 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding Atac153_MAPQ30_peak_5351 chr5 81814780 81814780 + 2.74562 NA Intergenic MLT1A|LTR|ERVL-MaLR 239499 NM_001017971 92270 Hs.729805 NM_001017971 HPRD:18710 ATP6AP1L - ATPase, H+ transporting, lysosomal accessory protein 1-like protein-coding Atac153_MAPQ30_peak_5341 chr5 76955494 76955494 + 2.74562 NA Intergenic L1M1|LINE|L1 -20972 NM_032109 23440 Hs.202247 NM_032109 OTP - orthopedia homeobox protein-coding Atac153_MAPQ30_peak_443 chr1 178426998 178426998 + 2.74562 NA exon (NM_004841, exon 12 of 16) exon (NM_004841, exon 12 of 16) -55214 NM_001170722 84066 Hs.534501 NM_032126 HPRD:13169 TEX35 C1orf49|TSC24 testis expressed 35 protein-coding Atac153_MAPQ30_peak_3062 chr18 36005436 36005436 + 2.74562 NA Intergenic MIRc|SINE|MIR 768338 NR_036202 100422857 NR_036202 miRBase:MI0015847 MIR4318 - microRNA 4318 ncRNA Atac153_MAPQ30_peak_6289 chr8 13136961 13136961 + 2.74562 NA intron (NM_182643, intron 5 of 17) intron (NM_182643, intron 5 of 17) -146152 NM_006094 10395 Hs.134296 NM_006094 HPRD:05035 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding Atac153_MAPQ30_peak_4040 chr20 24284216 24284216 + 2.74562 NA Intergenic MIRb|SINE|MIR 103813 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 FLJ33581 - uncharacterized LOC400839 ncRNA Atac153_MAPQ30_peak_3110 chr18 53364334 53364334 + 2.74562 NA Intergenic Intergenic -61110 NM_001243226 6925 Hs.605153 NM_003199 HPRD:03780 TCF4 E2-2|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding Atac153_MAPQ30_peak_1516 chr12 51746019 51746019 + 2.74562 NA 3' UTR (NM_007210, exon 12 of 12) 3' UTR (NM_007210, exon 12 of 12) -5556 NM_001971 1990 Hs.348395 NM_001971 HPRD:00553 CELA1 ELA1 chymotrypsin-like elastase family, member 1 protein-coding Atac153_MAPQ30_peak_2762 chr17 21246595 21246595 + 2.74562 NA Intergenic Intergenic -33104 NM_021012 3768 Hs.200629 NM_021012 HPRD:09083 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium inwardly-rectifying channel, subfamily J, member 12 protein-coding Atac153_MAPQ30_peak_4304 chr21 43815526 43815526 + 2.74562 NA exon (NM_032405, exon 2 of 9) exon (NM_032405, exon 2 of 9) 674 NM_032405 64699 Hs.208600 NM_024022 HPRD:05696 TMPRSS3 DFNB10|DFNB8|ECHOS1|TADG12 transmembrane protease, serine 3 protein-coding Atac153_MAPQ30_peak_5222 chr5 2883009 2883009 + 2.74562 NA Intergenic L1ME3|LINE|L1 130764 NR_122125 153571 Hs.668017 NM_178569 HPRD:16706 C5orf38 CEI|IRX2NB chromosome 5 open reading frame 38 protein-coding Atac153_MAPQ30_peak_5997 chr7 49118651 49118651 + 2.74562 NA Intergenic THE1B-int|LTR|ERVL-MaLR 154494 NR_003595 168448 Hs.567757 NM_152627 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C pseudo Atac153_MAPQ30_peak_3885 chr2 224333970 224333970 + 2.74562 NA Intergenic Intergenic 133247 NM_003469 7857 Hs.516726 NM_003469 HPRD:06762 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding Atac153_MAPQ30_peak_2421 chr16 17416146 17416146 + 2.74562 NA intron (NM_022166, intron 2 of 11) MIR|SINE|MIR 148592 NM_022166 64131 Hs.22907 NM_022166 HPRD:12168 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI xylosyltransferase I protein-coding Atac153_MAPQ30_peak_636 chr10 2162909 2162909 + 2.74562 NA Intergenic Intergenic -44626 NR_106720 102465944 NR_106720 MIR6072 hsa-mir-6072 microRNA 6072 ncRNA Atac153_MAPQ30_peak_763 chr10 59576689 59576689 + 2.74562 NA Intergenic HERVL18-int|LTR|ERVL 451005 NM_152230 253430 Hs.30280 NM_152230 HPRD:17153 IPMK - inositol polyphosphate multikinase protein-coding Atac153_MAPQ30_peak_4396 chr22 30715705 30715705 + 2.74562 NA intron (NM_001204240, intron 1 of 8) intron (NM_001204240, intron 1 of 8) 7250 NM_001204240 83874 Hs.655273 NM_031937 HPRD:18162 TBC1D10A EPI64|TBC1D10|dJ130H16.1|dJ130H16.2 TBC1 domain family, member 10A protein-coding Atac153_MAPQ30_peak_5209 chr4 190747331 190747331 + 2.74562 NA Intergenic Intergenic -114643 NM_004477 2483 Hs.203772 NM_004477 HPRD:03176 FRG1 FRG1A|FSG1 FSHD region gene 1 protein-coding Atac153_MAPQ30_peak_5327 chr5 71240315 71240315 + 2.74562 NA Intergenic Intergenic -162803 NM_005909 4131 Hs.335079 NM_005909 HPRD:01139 MAP1B FUTSCH|MAP5|PPP1R102 microtubule-associated protein 1B protein-coding Atac153_MAPQ30_peak_5249 chr5 8008597 8008597 + 2.74562 NA Intergenic L1M3e|LINE|L1 139380 NM_002454 4552 Hs.481551 NM_002454 HPRD:03979 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding Atac153_MAPQ30_peak_6403 chr8 73785289 73785289 + 2.74562 NA intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) -135808 NM_017489 7013 Hs.442707 NM_003218 HPRD:02975 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor (NIMA-interacting) 1 protein-coding Atac153_MAPQ30_peak_1673 chr12 120111539 120111539 + 2.74562 NA intron (NM_006253, intron 2 of 6) intron (NM_006253, intron 2 of 6) 5778 NM_006253 5564 Hs.741184 NM_006253 HPRD:04116 PRKAB1 AMPK|HAMPKb protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding Atac153_MAPQ30_peak_3487 chr2 30969685 30969685 + 2.74562 NA intron (NM_144575, intron 11 of 22) intron (NM_144575, intron 11 of 22) 60626 NM_144575 92291 Hs.660911 NM_144575 HPRD:07008 CAPN13 - calpain 13 protein-coding Atac153_MAPQ30_peak_2226 chr15 70512705 70512705 + 2.74562 NA Intergenic Intergenic -122449 NM_001105192 7090 Hs.287362 NM_005078 HPRD:02558 TLE3 ESG|ESG3|GRG3|HsT18976 transducin-like enhancer of split 3 protein-coding Atac153_MAPQ30_peak_6589 chr9 15587252 15587252 + 2.74562 NA intron (NM_173550, intron 4 of 25) THE1B|LTR|ERVL-MaLR 34155 NM_173550 203238 Hs.17267 NM_173550 HPRD:10805 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding Atac153_MAPQ30_peak_6299 chr8 20383679 20383679 + 2.74562 NA Intergenic Intergenic 250395 NR_047509 100874051 Hs.385799 NR_047509 ENSG00000253733 LZTS1-AS1 - LZTS1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4205 chr20 60354591 60354591 + 2.74562 NA intron (NM_001794, intron 4 of 15) intron (NM_001794, intron 4 of 15) 174127 NR_031658 100302168 NR_031658 miRBase:MI0006391 MIR1257 MIRN1257|hsa-mir-1257 microRNA 1257 ncRNA Atac153_MAPQ30_peak_5268 chr5 13646595 13646595 + 2.74562 NA Intergenic THE1B|LTR|ERVL-MaLR 297994 NM_001369 1767 Hs.212360 NM_001369 HPRD:04514 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein, axonemal, heavy chain 5 protein-coding Atac153_MAPQ30_peak_3103 chr18 48617546 48617546 + 2.74562 NA Intergenic HAL1|LINE|L1 60963 NM_005359 4089 Hs.75862 NM_005359 HPRD:02995 SMAD4 DPC4|JIP|MADH4|MYHRS SMAD family member 4 protein-coding Atac153_MAPQ30_peak_3606 chr2 91761009 91761009 + 2.72154 NA Intergenic L2b|LINE|L2 86966 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_569 chr1 229351941 229351941 + 2.70230 NA Intergenic L1MC4a|LINE|L1 -54868 NM_001271998 5867 Hs.296169 NM_004578 HPRD:01541 RAB4A HRES-1|HRES-1/RAB4|HRES1|RAB4 RAB4A, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_5626 chr6 29489284 29489284 + 2.70230 NA Intergenic L1MC|LINE|L1 -7899 NR_037181 100507362 Hs.99161 NR_037179 ENSG00000224582 LINC01015 - long intergenic non-protein coding RNA 1015 ncRNA Atac153_MAPQ30_peak_3531 chr2 47414427 47414427 + 2.70230 NA Intergenic MIRc|SINE|MIR -10687 NM_001743 805 Hs.468442 NM_001743 HPRD:00242 CALM2 CAMII|PHKD|PHKD2 calmodulin 2 (phosphorylase kinase, delta) protein-coding Atac153_MAPQ30_peak_2374 chr16 7202105 7202105 + 2.69719 NA intron (NM_018723, intron 4 of 15) intron (NM_018723, intron 4 of 15) -180646 NM_145891 54715 Hs.459842 NM_018723 HPRD:16091 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding Atac153_MAPQ30_peak_459 chr1 184254241 184254241 + 2.65912 NA Intergenic Intergenic -101909 NM_030806 81563 Hs.497159 NM_030806 HPRD:12721 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding Atac153_MAPQ30_peak_4647 chr3 41014472 41014472 + 2.65912 NA Intergenic Intergenic -226470 NM_001904 1499 Hs.476018 NM_001904 HPRD:00286 CTNNB1 CTNNB|MRD19|armadillo catenin (cadherin-associated protein), beta 1, 88kDa protein-coding Atac153_MAPQ30_peak_1959 chr14 68045534 68045534 + 2.65912 NA intron (NM_020715, intron 20 of 28) intron (NM_020715, intron 20 of 28) 21483 NM_004569 5283 Hs.553497 NM_004569 HPRD:02540 PIGH GPI-H phosphatidylinositol glycan anchor biosynthesis, class H protein-coding Atac153_MAPQ30_peak_3766 chr2 145475090 145475090 + 2.65912 NA intron (NR_033870, intron 1 of 4) L1ME1|LINE|L1 49556 NR_033870 401014 Hs.742290 NR_033870 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 (non-protein coding) ncRNA Atac153_MAPQ30_peak_5033 chr4 14362226 14362226 + 2.65912 NA Intergenic Intergenic 248634 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA Atac153_MAPQ30_peak_2881 chr17 57505134 57505134 + 2.65912 NA Intergenic Intergenic 61690 NR_039882 100616204 NR_039882 MIR4729 - microRNA 4729 ncRNA Atac153_MAPQ30_peak_1960 chr14 68236419 68236419 + 2.65912 NA exon (NM_015346, exon 29 of 42) exon (NM_015346, exon 29 of 42) 46887 NM_015346 23503 Hs.98041 NM_015346 HPRD:15734 ZFYVE26 FYVE-CENT|SPG15 zinc finger, FYVE domain containing 26 protein-coding Atac153_MAPQ30_peak_22 chr1 4362317 4362317 + 2.65912 NA Intergenic Intergenic -109794 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LOC284661 - uncharacterized LOC284661 ncRNA Atac153_MAPQ30_peak_6090 chr7 100550857 100550857 + 2.65912 NA exon (NM_005960, exon 2 of 13) exon (NM_005960, exon 2 of 13) 3805 NM_005960 4584 Hs.744422 NM_005960 MUC3A MUC-3A|MUC3 mucin 3A, cell surface associated protein-coding Atac153_MAPQ30_peak_3708 chr2 127430802 127430802 + 2.65912 NA intron (NM_016815, intron 1 of 2) intron (NM_016815, intron 1 of 2) 17291 NM_002101 2995 Hs.59138 NM_002101 HPRD:00193 GYPC CD236|CD236R|GE|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding Atac153_MAPQ30_peak_4230 chr21 11136159 11136159 + 2.65912 NA Intergenic AluSx1|SINE|Alu -37222 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding Atac153_MAPQ30_peak_1932 chr14 57527899 57527899 + 2.65912 NA Intergenic Intergenic -207707 NM_018229 55745 Hs.597349 NM_018229 HPRD:12630 AP5M1 C14orf108|MUDENG|Mu5|MuD adaptor-related protein complex 5, mu 1 subunit protein-coding Atac153_MAPQ30_peak_1086 chr11 11393755 11393755 + 2.65912 NA intron (NM_198516, intron 6 of 10) intron (NM_198516, intron 6 of 10) -18851 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2, alpha 3 polypeptide protein-coding Atac153_MAPQ30_peak_1097 chr11 14645861 14645861 + 2.65912 NA intron (NM_148976, intron 1 of 10) ERV3-16A3_I-int|LTR|ERVL 19319 NM_148976 5682 Hs.102798 NM_002786 HPRD:04170 PSMA1 HC2|HEL-S-275|NU|PROS30 proteasome (prosome, macropain) subunit, alpha type, 1 protein-coding Atac153_MAPQ30_peak_4761 chr3 73159995 73159995 + 2.65912 NA Intergenic CpG 49185 NM_018029 55096 Hs.658858 NM_018029 HPRD:07654 EBLN2 EBLN-2 endogenous Bornavirus-like nucleoprotein 2 protein-coding Atac153_MAPQ30_peak_2386 chr16 9946678 9946678 + 2.65912 NA intron (NM_000833, intron 5 of 13) intron (NM_000833, intron 5 of 13) -288430 NR_106988 102465753 NR_106988 MIR7641-2 B-ATF|hsa-mir-7641-2 microRNA 7641-2 ncRNA Atac153_MAPQ30_peak_740 chr10 47081367 47081367 + 2.65912 NA Intergenic MIRb|SINE|MIR -2167 NM_005972 5540 Hs.524719 NM_005972 HPRD:03476 NPY4R NPY4-R|PP1|PPYR1|Y4 neuropeptide Y receptor Y4 protein-coding Atac153_MAPQ30_peak_6055 chr7 70600753 70600753 + 2.65912 NA intron (NM_022479, intron 1 of 10) intron (NM_022479, intron 1 of 10) 3230 NM_022479 64409 Hs.488591 NM_022479 HPRD:15655 WBSCR17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T5L Williams-Beuren syndrome chromosome region 17 protein-coding Atac153_MAPQ30_peak_4019 chr20 19531380 19531380 + 2.65912 NA intron (NM_020689, intron 3 of 16) intron (NM_020689, intron 3 of 16) -266140 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA Atac153_MAPQ30_peak_6078 chr7 96852557 96852557 + 2.63911 NA Intergenic Intergenic 106652 NM_020186 57001 Hs.592269 NM_020186 HPRD:16471 ACN9 - ACN9 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_2600 chr16 83391535 83391535 + 2.63911 NA intron (NM_001220488, intron 7 of 14) MIR|SINE|MIR -150416 NR_036147 100422853 NR_036147 MIR3182 - microRNA 3182 ncRNA Atac153_MAPQ30_peak_5550 chr6 306824 306824 + 2.57937 NA intron (NR_104474, intron 2 of 5) intron (NR_104474, intron 2 of 5) 14767 NM_001286555 56940 Hs.29106 NM_020185 HPRD:13255 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding Atac153_MAPQ30_peak_462 chr1 186734508 186734508 + 2.57937 NA Intergenic Intergenic -63524 NM_024420 5321 Hs.497200 NM_024420 HPRD:08986 PLA2G4A PLA2G4|cPLA2-alpha phospholipase A2, group IVA (cytosolic, calcium-dependent) protein-coding Atac153_MAPQ30_peak_6415 chr8 93079423 93079423 + 2.57937 NA intron (NM_001198632, intron 1 of 11) intron (NM_001198632, intron 1 of 11) -4232 NM_004349 862 Hs.368431 NM_004349 HPRD:00590 RUNX1T1 AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) protein-coding Atac153_MAPQ30_peak_5681 chr6 41764064 41764064 + 2.53401 NA 3' UTR (NM_001286554, exon 6 of 6) 3' UTR (NM_001286554, exon 6 of 6) 8883 NM_001134493 100188893 Hs.731633 NM_001134493 TOMM6 OBTP translocase of outer mitochondrial membrane 6 homolog (yeast) protein-coding Atac153_MAPQ30_peak_5048 chr4 24854968 24854968 + 2.53401 NA intron (NM_173463, intron 4 of 12) intron (NM_173463, intron 4 of 12) 57883 NM_003102 6649 Hs.2420 NM_003102 HPRD:01708 SOD3 EC-SOD superoxide dismutase 3, extracellular protein-coding Atac153_MAPQ30_peak_1179 chr11 46314138 46314138 + 2.53401 NA intron (NM_052854, intron 1 of 11) intron (NM_052854, intron 1 of 11) 14949 NM_052854 90993 Hs.405961 NM_052854 HPRD:16751 CREB3L1 OASIS cAMP responsive element binding protein 3-like 1 protein-coding Atac153_MAPQ30_peak_2912 chr17 69980318 69980318 + 2.53401 NA Intergenic Intergenic 41802 NR_110876 102723505 Hs.547482 NR_110876 LOC102723505 - uncharacterized LOC102723505 ncRNA Atac153_MAPQ30_peak_3094 chr18 46292927 46292927 + 2.53401 NA intron (NM_014772, intron 9 of 11) MER5B|DNA|hAT-Charlie 95956 NR_039897 100616366 NR_039897 MIR4743 - microRNA 4743 ncRNA Atac153_MAPQ30_peak_3104 chr18 49090406 49090406 + 2.53401 NA Intergenic Intergenic 171994 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LOC100287225 - uncharacterized LOC100287225 ncRNA Atac153_MAPQ30_peak_1764 chr13 22681922 22681922 + 2.53401 NA Intergenic Intergenic -102502 NR_103810 100506622 Hs.255773 NR_103810 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA Atac153_MAPQ30_peak_6393 chr8 61812513 61812513 + 2.53401 NA Intergenic Intergenic 67794 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA Atac153_MAPQ30_peak_1285 chr11 79528712 79528712 + 2.53401 NA Intergenic Intergenic -377017 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ODZ4|TNM4|Ten-M4 teneurin transmembrane protein 4 protein-coding Atac153_MAPQ30_peak_2095 chr15 22541857 22541857 + 2.53401 NA Intergenic Intergenic -4708 NR_033735 646396 Hs.451294 NR_033735 REREP3 - arginine-glutamic acid dipeptide (RE) repeats pseudogene 3 pseudo Atac153_MAPQ30_peak_5553 chr6 484641 484641 + 2.53401 NA TTS (NM_018303) TTS (NM_018303) 92902 NM_002460 3662 Hs.401013 NM_002460 HPRD:03543 IRF4 LSIRF|MUM1|NF-EM5 interferon regulatory factor 4 protein-coding Atac153_MAPQ30_peak_3175 chr19 782926 782926 + 2.53401 NA Intergenic Intergenic -14466 NM_031991 5725 Hs.172550 NM_002819 HPRD:02823 PTBP1 HNRNP-I|HNRNPI|HNRPI|PTB|PTB-1|PTB-T|PTB2|PTB3|PTB4|pPTB polypyrimidine tract binding protein 1 protein-coding Atac153_MAPQ30_peak_3417 chr2 11894421 11894421 + 2.53401 NA intron (NM_145693, intron 1 of 19) intron (NM_145693, intron 1 of 19) 7699 NM_145693 23175 Hs.467740 NM_145693 HPRD:09271 LPIN1 PAP1 lipin 1 protein-coding Atac153_MAPQ30_peak_3241 chr19 16980328 16980328 + 2.53401 NA exon (NM_015260, exon 14 of 20) exon (NM_015260, exon 14 of 20) 6243 NM_001297597 23309 Hs.13999 NM_015260 HPRD:09691 SIN3B - SIN3 transcription regulator family member B protein-coding Atac153_MAPQ30_peak_1816 chr13 51685718 51685718 + 2.53401 NA intron (NR_102432, intron 1 of 3) intron (NR_102432, intron 1 of 3) -45425 NR_003923 2974 Hs.411573 NM_004129 HPRD:07542 GUCY1B2 GC-SB2 guanylate cyclase 1, soluble, beta 2 (pseudogene) pseudo Atac153_MAPQ30_peak_6548 chr8 143195632 143195632 + 2.53401 NA Intergenic MIR|SINE|MIR -62068 NR_039682 100616268 NR_039682 miRBase:MI0016823 MIR4472-1 - microRNA 4472-1 ncRNA Atac153_MAPQ30_peak_1230 chr11 65817223 65817223 + 2.53401 NA promoter-TSS (NM_033036) promoter-TSS (NM_033036) -572 NM_033036 89792 Hs.208343 NM_033036 GAL3ST3 GAL3ST-3|GAL3ST2 galactose-3-O-sulfotransferase 3 protein-coding Atac153_MAPQ30_peak_6488 chr8 131505739 131505739 + 2.53401 NA Intergenic Intergenic -49833 NM_018482 50807 Hs.655552 NM_018482 HPRD:05809 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding Atac153_MAPQ30_peak_3906 chr2 233898278 233898278 + 2.53401 NA intron (NM_005383, intron 1 of 1) intron (NM_005383, intron 1 of 1) 896 NM_005383 4759 Hs.532681 NM_005383 HPRD:05702 NEU2 SIAL2 sialidase 2 (cytosolic sialidase) protein-coding Atac153_MAPQ30_peak_4852 chr3 134413253 134413253 + 2.53401 NA Intergenic Intergenic -43389 NM_178554 339855 Hs.146730 NM_178554 KY - kyphoscoliosis peptidase protein-coding Atac153_MAPQ30_peak_1986 chr14 74970533 74970533 + 2.53401 NA intron (NM_000428, intron 31 of 35) intron (NM_000428, intron 31 of 35) 10110 NM_194279 122961 Hs.291079 NM_194279 ISCA2 HBLD1|ISA2|c14_5557 iron-sulfur cluster assembly 2 protein-coding Atac153_MAPQ30_peak_5037 chr4 16109262 16109262 + 2.53401 NA Intergenic MER96B|DNA|hAT -23639 NM_001145848 8842 Hs.614734 NM_006017 HPRD:05079 PROM1 AC133|CD133|CORD12|MCDR2|PROML1|RP41|STGD4 prominin 1 protein-coding Atac153_MAPQ30_peak_4892 chr3 154770212 154770212 + 2.53401 NA Intergenic THE1C-int|LTR|ERVL-MaLR -27224 NM_000902 4311 Hs.307734 NM_000902 HPRD:00392 MME CALLA|CD10|NEP|SFE membrane metallo-endopeptidase protein-coding Atac153_MAPQ30_peak_4551 chr3 10382327 10382327 + 2.53401 NA exon (NM_001683, exon 17 of 20) exon (NM_001683, exon 17 of 20) -19455 NM_001278946 6396 Hs.166924 NM_030673 HPRD:02538 SEC13 D3S1231E|SEC13L1|SEC13R|npp-20 SEC13 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_1371 chr11 125210336 125210336 + 2.53401 NA intron (NM_022062, intron 3 of 12) intron (NM_022062, intron 3 of 12) 155870 NM_005103 9638 Hs.224008 NM_005103 HPRD:09212 FEZ1 - fasciculation and elongation protein zeta 1 (zygin I) protein-coding Atac153_MAPQ30_peak_4204 chr20 60166949 60166949 + 2.53401 NA intron (NM_001252338, intron 1 of 14) Charlie1a|DNA|hAT-Charlie -7868 NM_001252339 1002 Hs.473231 NM_001794 HPRD:04304 CDH4 CAD4|R-CAD|RCAD cadherin 4, type 1, R-cadherin (retinal) protein-coding Atac153_MAPQ30_peak_451 chr1 180633285 180633285 + 2.53401 NA intron (NM_001135669, intron 1 of 13) L1MA3|LINE|L1 32139 NM_004736 9213 Hs.227656 NM_004736 HPRD:05574 XPR1 SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding Atac153_MAPQ30_peak_1802 chr13 41004073 41004073 + 2.53401 NA intron (NR_024506, intron 5 of 5) intron (NR_024506, intron 5 of 5) 51070 NR_024507 646982 Hs.287664 NR_024505 LINC00598 TTL long intergenic non-protein coding RNA 598 ncRNA Atac153_MAPQ30_peak_6203 chr7 152153329 152153329 + 2.53401 NA Intergenic Intergenic -7880 NR_027387 100128822 Hs.647112 NR_027387 ENSG00000261455 LINC01003 - long intergenic non-protein coding RNA 1003 ncRNA Atac153_MAPQ30_peak_4815 chr3 126286639 126286639 + 2.53401 NA Intergenic Intergenic -8881 NM_152533 152065 Hs.178210 NM_152533 HPRD:14585 C3orf22 - chromosome 3 open reading frame 22 protein-coding Atac153_MAPQ30_peak_7285 chrX 152646023 152646023 + 2.53401 NA Intergenic Intergenic -37758 NM_001136273 139735 Hs.534554 NM_001136273 ENSG00000189420 ZFP92 ZNF897 ZFP92 zinc finger protein protein-coding Atac153_MAPQ30_peak_4209 chr20 60933060 60933060 + 2.53401 NA intron (NM_005560, intron 2 of 79) intron (NM_005560, intron 2 of 79) 4994 NR_109924 101928158 Hs.473256 NR_109922 ENSG00000228812 LAMA5-AS1 - LAMA5 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_7023 chrX 48782931 48782931 + 2.53401 NA intron (NM_017602, intron 6 of 8) intron (NM_017602, intron 6 of 8) -6518 NM_006875 11040 Hs.727148 NM_006875 HPRD:02244 PIM2 - Pim-2 proto-oncogene, serine/threonine kinase protein-coding Atac153_MAPQ30_peak_5705 chr6 52795058 52795058 + 2.53401 NA Intergenic Intergenic -20562 NM_000847 2940 Hs.102484 NM_000847 HPRD:07290 GSTA3 GSTA3-3|GTA3 glutathione S-transferase alpha 3 protein-coding Atac153_MAPQ30_peak_6296 chr8 20164295 20164295 + 2.53401 NA Intergenic Intergenic 31011 NR_047509 100874051 Hs.385799 NR_047509 ENSG00000253733 LZTS1-AS1 - LZTS1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3000 chr18 7896699 7896699 + 2.53401 NA intron (NM_001105244, intron 3 of 32) intron (NM_001105244, intron 3 of 32) 329385 NM_001105244 5797 Hs.49774 NM_002845 HPRD:01479 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase, receptor type, M protein-coding Atac153_MAPQ30_peak_4667 chr3 48309396 48309396 + 2.53401 NA intron (NM_016089, intron 3 of 3) intron (NM_016089, intron 3 of 3) 26800 NM_016089 51385 Hs.172602 NM_016089 HPRD:15865 ZNF589 SZF1 zinc finger protein 589 protein-coding Atac153_MAPQ30_peak_1747 chr12 132691935 132691935 + 2.53401 NA intron (NM_001122636, intron 6 of 10) intron (NM_001122636, intron 6 of 10) -1362 NM_021808 50614 Hs.301062 NM_021808 ENSG00000182870 GALNT9 GALNAC-T9|GALNACT9 polypeptide N-acetylgalactosaminyltransferase 9 protein-coding Atac153_MAPQ30_peak_5957 chr7 33190180 33190180 + 2.53401 NA intron (NM_198428, intron 2 of 22) LTR47B|LTR|ERVL 21028 NM_014451 27241 Hs.372360 NM_014451 HPRD:16262 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding Atac153_MAPQ30_peak_5872 chr6 170247073 170247073 + 2.53401 NA Intergenic Intergenic -48152 NR_026781 401288 Hs.556095 NM_207502 HPRD:16657 LINC00242 C6orf122|NCRNA00242|dJ266L20.5 long intergenic non-protein coding RNA 242 ncRNA Atac153_MAPQ30_peak_2465 chr16 27788706 27788706 + 2.53401 NA intron (NM_015202, intron 25 of 27) MIRb|SINE|MIR 110772 NM_144675 146395 Hs.91910 NM_144675 HPRD:14464 GSG1L PRO19651 GSG1-like protein-coding Atac153_MAPQ30_peak_516 chr1 209688686 209688686 + 2.53401 NA Intergenic Intergenic -68359 NM_020439 57172 Hs.199068 NM_020439 HPRD:10807 CAMK1G CLICK3|CLICKIII|VWS1|dJ272L16.1 calcium/calmodulin-dependent protein kinase IG protein-coding Atac153_MAPQ30_peak_144 chr1 23848262 23848262 + 2.53401 NA promoter-TSS (NR_110799) promoter-TSS (NR_110799) -160 NR_110799 101928163 Hs.588761 NR_110799 LOC101928163 - uncharacterized LOC101928163 ncRNA Atac153_MAPQ30_peak_924 chr10 118532935 118532935 + 2.53401 NA Intergenic Intergenic -30850 NM_025015 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock 70kDa protein 12A protein-coding Atac153_MAPQ30_peak_6571 chr8 146071784 146071784 + 2.53401 NA 3' UTR (NM_001282796, exon 5 of 5) 3' UTR (NM_001282796, exon 5 of 5) 6668 NM_001081004 28991 Hs.631856 NM_014066 HPRD:16301 COMMD5 HCARG COMM domain containing 5 protein-coding Atac153_MAPQ30_peak_3667 chr2 109844649 109844649 + 2.53401 NA intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 85432 NR_036224 100423027 NR_036224 miRBase:MI0015870 MIR4266 - microRNA 4266 ncRNA Atac153_MAPQ30_peak_198 chr1 36944961 36944961 + 2.53401 NA intron (NM_172313, intron 3 of 17) intron (NM_172313, intron 3 of 17) 3954 NM_172313 1441 Hs.524517 NM_000760 HPRD:00737 CSF3R CD114|GCSFR colony stimulating factor 3 receptor (granulocyte) protein-coding Atac153_MAPQ30_peak_4436 chr22 37711066 37711066 + 2.53401 NA 3' UTR (NM_013385, exon 13 of 13) 3' UTR (NM_013385, exon 13 of 13) 32571 NM_013385 27128 Hs.170944 NM_013385 HPRD:07354 CYTH4 CYT4|DJ63G5.1|PSCD4 cytohesin 4 protein-coding Atac153_MAPQ30_peak_1089 chr11 12028008 12028008 + 2.53401 NA intron (NM_001018057, intron 1 of 6) intron (NM_001018057, intron 1 of 6) 2178 NM_001018057 27122 Hs.292156 NM_013253 HPRD:05659 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding Atac153_MAPQ30_peak_1360 chr11 121011008 121011008 + 2.53401 NA intron (NM_005422, intron 10 of 22) intron (NM_005422, intron 10 of 22) 37633 NM_005422 7007 Hs.248162 NM_005422 HPRD:03985 TECTA DFNA12|DFNA8|DFNB21 tectorin alpha protein-coding Atac153_MAPQ30_peak_1924 chr14 55167211 55167211 + 2.53401 NA intron (NM_001161576, intron 1 of 10) intron (NM_001161576, intron 1 of 10) -54295 NM_001161577 23034 Hs.98259 NM_015589 HPRD:10209 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding Atac153_MAPQ30_peak_1242 chr11 69720103 69720103 + 2.53401 NA Intergenic MLT1K|LTR|ERVL-MaLR -85911 NM_005247 2248 Hs.37092 NM_005247 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding Atac153_MAPQ30_peak_2388 chr16 10321415 10321415 + 2.53401 NA Intergenic MER102b|DNA|hAT-Charlie -44804 NM_000833 2903 Hs.411472 NM_000833 HPRD:00698 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A protein-coding Atac153_MAPQ30_peak_4558 chr3 10944115 10944115 + 2.53401 NA intron (NM_014229, intron 6 of 13) intron (NM_014229, intron 6 of 13) 86198 NM_014229 6538 Hs.657405 NM_014229 SLC6A11 GAT-3|GAT3|GAT4 solute carrier family 6 (neurotransmitter transporter), member 11 protein-coding Atac153_MAPQ30_peak_5831 chr6 160795782 160795782 + 2.53401 NA intron (NM_021977, intron 1 of 10) intron (NM_021977, intron 1 of 10) 26377 NM_021977 6581 Hs.567337 NM_021977 HPRD:05328 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 (organic cation transporter), member 3 protein-coding Atac153_MAPQ30_peak_5509 chr5 174342925 174342925 + 2.53401 NA Intergenic Intergenic 79809 NR_046113 441116 Hs.533036 NM_001004348 HPRD:16911 FLJ16171 - FLJ16171 protein ncRNA Atac153_MAPQ30_peak_4826 chr3 127483008 127483008 + 2.53401 NA intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 58717 NM_007283 11343 Hs.277035 NM_007283 HPRD:17574 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding Atac153_MAPQ30_peak_2380 chr16 8723036 8723036 + 2.53401 NA intron (NM_024109, intron 3 of 10) intron (NM_024109, intron 3 of 10) 7509 NM_024109 79091 Hs.306380 NM_024109 HPRD:08324 METTL22 C16orf68 methyltransferase like 22 protein-coding Atac153_MAPQ30_peak_3009 chr18 9540435 9540435 + 2.53401 NA Intergenic Intergenic 64905 NM_006788 10928 Hs.528993 NM_006788 HPRD:09013 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding Atac153_MAPQ30_peak_5400 chr5 132742716 132742716 + 2.53401 NA intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) 20682 NR_031621 100302134 NR_031621 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA Atac153_MAPQ30_peak_4168 chr20 54733022 54733022 + 2.53401 NA Intergenic Intergenic -90766 NM_019888 4159 Hs.248018 NM_019888 HPRD:01115 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding Atac153_MAPQ30_peak_5643 chr6 34053757 34053757 + 2.53401 NA intron (NM_001282847, intron 2 of 9) L2a|LINE|L2 20002 NM_001256813 2914 Hs.429018 NM_000841 HPRD:04978 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate receptor, metabotropic 4 protein-coding Atac153_MAPQ30_peak_7049 chrX 57778470 57778470 + 2.53401 NA Intergenic L1MA2|LINE|L1 158597 NM_007156 7789 Hs.550094 NM_007156 HPRD:02210 ZXDA ZNF896 zinc finger, X-linked, duplicated A protein-coding Atac153_MAPQ30_peak_4834 chr3 128842015 128842015 + 2.53401 NA intron (NM_001204890, intron 11 of 12) intron (NM_001204890, intron 11 of 12) -1022 NM_001204883 339122 Hs.381132 NM_198490 HPRD:17947 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_372 chr1 151967781 151967781 + 2.53401 NA Intergenic Intergenic -1067 NM_002966 6281 Hs.143873 NM_002966 HPRD:00232 S100A10 42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10 S100 calcium binding protein A10 protein-coding Atac153_MAPQ30_peak_4945 chr3 193846357 193846357 + 2.53401 NA Intergenic MIR3|SINE|MIR -7574 NM_005524 3280 Hs.250666 NM_005524 HPRD:00770 HES1 HES-1|HHL|HRY|bHLHb39 hes family bHLH transcription factor 1 protein-coding Atac153_MAPQ30_peak_2236 chr15 73860120 73860120 + 2.53401 NA non-coding (NR_103844, exon 1 of 1) non-coding (NR_103844, exon 1 of 1) 1764 NR_103844 101241892 Hs.656678 NR_103844 NPTN-IT1 lncRNA-LET NPTN intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_778 chr10 70644412 70644412 + 2.53401 NA exon (NM_152709, exon 3 of 4) exon (NM_152709, exon 3 of 4) -16622 NM_024045 79009 Hs.522984 NM_024045 HPRD:09910 DDX50 GU2|GUB|RH-II/GuB|mcdrh DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein-coding Atac153_MAPQ30_peak_1493 chr12 34517776 34517776 + 2.53401 NA Intergenic GSATII|Satellite|centr 342560 NM_032834 84920 Hs.102971 NM_032834 ALG10 ALG10A|DIE2|KCR1 ALG10, alpha-1,2-glucosyltransferase protein-coding Atac153_MAPQ30_peak_5674 chr6 40489747 40489747 + 2.53401 NA intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 65379 NM_020737 57497 Hs.250015 NM_020737 HPRD:17444 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding Atac153_MAPQ30_peak_2547 chr16 68685536 68685536 + 2.53401 NA intron (NM_001793, intron 2 of 15) intron (NM_001793, intron 2 of 15) 7385 NM_001793 1001 Hs.191842 NM_001793 HPRD:00227 CDH3 CDHP|HJMD|PCAD cadherin 3, type 1, P-cadherin (placental) protein-coding Atac153_MAPQ30_peak_1875 chr13 112345123 112345123 + 2.53401 NA Intergenic Intergenic -202569 NR_046992 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA Atac153_MAPQ30_peak_6634 chr9 72692163 72692163 + 2.53401 NA intron (NM_153267, intron 2 of 13) MamRep488|DNA|hAT 33666 NM_153267 256691 Hs.547172 NM_153267 HPRD:14353 MAMDC2 - MAM domain containing 2 protein-coding Atac153_MAPQ30_peak_4572 chr3 13014287 13014287 + 2.53401 NA intron (NM_001134382, intron 1 of 14) intron (NM_001134382, intron 1 of 14) -5089 NM_014869 9922 Hs.475506 NM_014869 HPRD:11052 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding Atac153_MAPQ30_peak_3835 chr2 203500972 203500972 + 2.53401 NA intron (NM_173511, intron 1 of 7) intron (NM_173511, intron 1 of 7) 1071 NM_173511 150864 Hs.471130 NM_173511 HPRD:12445 FAM117B ALS2CR13 family with sequence similarity 117, member B protein-coding Atac153_MAPQ30_peak_2601 chr16 83465792 83465792 + 2.53401 NA intron (NM_001220488, intron 7 of 14) intron (NM_001220488, intron 7 of 14) -76159 NR_036147 100422853 NR_036147 MIR3182 - microRNA 3182 ncRNA Atac153_MAPQ30_peak_6284 chr8 11430148 11430148 + 2.53401 NA Intergenic Intergenic -3896 NR_040035 83655 Hs.742430 NR_040035 ENSG00000170983 LINC00208 C8orf14|NCRNA00208|VIR35 long intergenic non-protein coding RNA 208 ncRNA Atac153_MAPQ30_peak_5409 chr5 133840586 133840586 + 2.53401 NA Intergenic Intergenic -1657 NR_105045 101927934 Hs.535775 NR_105045 ENSG00000251169 LOC101927934 - uncharacterized LOC101927934 ncRNA Atac153_MAPQ30_peak_6889 chrX 2935150 2935150 + 2.53401 NA intron (NM_001011719, intron 4 of 8) intron (NM_001011719, intron 4 of 8) 10496 NM_001011719 347527 Hs.351533 NM_001011719 HPRD:16509 ARSH sulfatase arylsulfatase family, member H protein-coding Atac153_MAPQ30_peak_2838 chr17 43332039 43332039 + 2.53401 NA intron (NM_152343, intron 4 of 4) intron (NM_152343, intron 4 of 4) 6747 NR_024434 100133991 Hs.668927 NR_024434 ENSG00000267278 MAP3K14-AS1 - MAP3K14 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_11 chr1 2198745 2198745 + 2.53401 NA intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 38611 NM_003036 6497 Hs.656507 NM_003036 HPRD:01271 SKI SGS|SKV SKI proto-oncogene protein-coding Atac153_MAPQ30_peak_2401 chr16 12352732 12352732 + 2.53401 NA intron (NM_032167, intron 14 of 20) intron (NM_032167, intron 14 of 20) 282130 NM_032167 92017 Hs.458401 NM_032167 HPRD:17437 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding Atac153_MAPQ30_peak_1993 chr14 76561558 76561558 + 2.53401 NA Intergenic Intergenic -56670 NM_017926 55668 Hs.410231 NM_017926 HPRD:16594 GPATCH2L C14orf118 G patch domain containing 2-like protein-coding Atac153_MAPQ30_peak_3359 chr19 57867821 57867821 + 2.53401 NA exon (NM_001290319, exon 4 of 4) exon (NM_001290319, exon 4 of 4) 5179 NM_001290319 57343 Hs.287374 NM_020657 HPRD:15766 ZNF304 - zinc finger protein 304 protein-coding Atac153_MAPQ30_peak_1882 chr13 113407127 113407127 + 2.53401 NA non-coding (NR_109811, exon 1 of 1) non-coding (NR_109811, exon 1 of 1) 1918 NR_109811 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1824 chr13 58156050 58156050 + 2.53401 NA Intergenic L1PB2|LINE|L1 -49739 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding Atac153_MAPQ30_peak_2248 chr15 75273415 75273415 + 2.53401 NA Intergenic L1MB2|LINE|L1 -14461 NM_001178111 192683 Hs.374180 NM_138967 HPRD:18020 SCAMP5 - secretory carrier membrane protein 5 protein-coding Atac153_MAPQ30_peak_172 chr1 31770746 31770746 + 2.53401 NA intron (NM_001282566, intron 1 of 6) L2b|LINE|L2 917 NM_001282567 51538 Hs.524094 NM_016505 HPRD:15189 ZCCHC17 HSPC251|PS1D|pNO40 zinc finger, CCHC domain containing 17 protein-coding Atac153_MAPQ30_peak_2448 chr16 25433354 25433354 + 2.53401 NA Intergenic LTR16B|LTR|ERVL -164499 NM_001012981 342357 Hs.513451 NM_001012981 HPRD:11268 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding Atac153_MAPQ30_peak_4022 chr20 20359928 20359928 + 2.53401 NA Intergenic Intergenic 11163 NM_002196 3642 Hs.89584 NM_002196 HPRD:02480 INSM1 IA-1|IA1 insulinoma-associated 1 protein-coding Atac153_MAPQ30_peak_2944 chr17 75422734 75422734 + 2.53401 NA intron (NM_001293696, intron 1 of 9) L2a|LINE|L2 21583 NM_001293696 10801 Hs.440932 NM_006640 HPRD:10360 SEPT9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1 septin 9 protein-coding Atac153_MAPQ30_peak_6233 chr7 158448913 158448913 + 2.53401 NA intron (NM_001281933, intron 19 of 27) intron (NM_001281933, intron 19 of 27) 48609 NR_104054 54892 Hs.18616 NM_017760 HPRD:10539 NCAPG2 CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex, subunit G2 protein-coding Atac153_MAPQ30_peak_1506 chr12 48528277 48528277 + 2.53401 NA intron (NM_000289, intron 7 of 22) intron (NM_000289, intron 7 of 22) 1697 NR_106760 102466657 NR_106760 MIR6505 hsa-mir-6505 microRNA 6505 ncRNA Atac153_MAPQ30_peak_4773 chr3 97670617 97670617 + 2.53401 NA intron (NM_001261829, intron 5 of 9) intron (NM_001261829, intron 5 of 9) 20678 NM_001261829 84864 Hs.570562 NM_032778 HPRD:17575 MINA MDIG|MINA53|NO52|ROX MYC induced nuclear antigen protein-coding Atac153_MAPQ30_peak_1515 chr12 50204226 50204226 + 2.53401 NA intron (NM_001037806, intron 1 of 12) MIR3|SINE|MIR 17982 NM_001037806 57701 Hs.143067 NM_001037806 ENSG00000167566 NCKAP5L KIAA1602 NCK-associated protein 5-like protein-coding Atac153_MAPQ30_peak_1683 chr12 122612043 122612043 + 2.53401 NA intron (NM_014938, intron 2 of 16) intron (NM_014938, intron 2 of 16) -40223 NM_152759 254050 Hs.374856 NM_152759 HPRD:14601 LRRC43 - leucine rich repeat containing 43 protein-coding Atac153_MAPQ30_peak_3165 chr18 76662686 76662686 + 2.53401 NA Intergenic Intergenic -77589 NM_171999 27164 Hs.700557 NM_171999 SALL3 ZNF796 spalt-like transcription factor 3 protein-coding Atac153_MAPQ30_peak_405 chr1 159928042 159928042 + 2.53401 NA Intergenic ERV3-16A3_LTR|LTR|ERVL -2972 NR_038849 100505633 Hs.445045 NR_038849 ENSG00000224259 LINC01133 - long intergenic non-protein coding RNA 1133 ncRNA Atac153_MAPQ30_peak_982 chr10 129265324 129265324 + 2.53401 NA Intergenic MLT1I|LTR|ERVL-MaLR -82289 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding Atac153_MAPQ30_peak_6368 chr8 47736173 47736173 + 2.53401 NA Intergenic BSR/Beta|Satellite|Satellite -16335 NR_027012 497634 Hs.406982 NR_027012 ENSG00000253314 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA Atac153_MAPQ30_peak_3998 chr20 9611150 9611150 + 2.53401 NA intron (NM_177990, intron 3 of 9) MLT1F2-int|LTR|ERVL-MaLR -115505 NR_109957 101929329 Hs.589878 NR_109957 ENSG00000225988 LAMP5-AS1 - LAMP5 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2741 chr17 18888222 18888222 + 2.53401 NA intron (NM_001039999, intron 3 of 5) intron (NM_001039999, intron 3 of 5) 19838 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83, member G protein-coding Atac153_MAPQ30_peak_5013 chr4 8279765 8279765 + 2.53401 NA intron (NM_001297559, intron 1 of 6) MER91C|DNA|hAT-Tip100 8273 NM_053044 94031 Hs.479119 NM_053044 HPRD:08821 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding Atac153_MAPQ30_peak_6966 chrX 30843459 30843459 + 2.53401 NA Intergenic Intergenic 64052 NM_152787 257397 Hs.188256 NM_152787 HPRD:06738 TAB3 MAP3K7IP3|NAP1 TGF-beta activated kinase 1/MAP3K7 binding protein 3 protein-coding Atac153_MAPQ30_peak_6755 chr9 116291673 116291673 + 2.53401 NA intron (NM_130795, intron 9 of 15) intron (NM_130795, intron 9 of 15) -7084 NM_001276260 5998 Hs.494875 NM_017790 HPRD:03720 RGS3 C2PA|RGP3 regulator of G-protein signaling 3 protein-coding Atac153_MAPQ30_peak_6806 chr9 128751514 128751514 + 2.53401 NA Intergenic Intergenic 241036 NM_001134778 5090 Hs.428027 NM_006195 HPRD:15938 PBX3 - pre-B-cell leukemia homeobox 3 protein-coding Atac153_MAPQ30_peak_828 chr10 81059219 81059219 + 2.53401 NA intron (NM_020338, intron 16 of 24) intron (NM_020338, intron 16 of 24) -48001 NM_005729 10105 Hs.381072 NM_005729 HPRD:06839 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding Atac153_MAPQ30_peak_4506 chr22 48225440 48225440 + 2.53401 NA intron (NR_122046, intron 8 of 8) intron (NR_122046, intron 8 of 8) 198017 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA Atac153_MAPQ30_peak_623 chr1 246695693 246695693 + 2.53401 NA Intergenic HUERS-P3-int|LTR|ERV1 -8104 NR_040002 255654 Hs.407570 NR_040002 ENSG00000242042 LOC255654 - uncharacterized LOC255654 ncRNA Atac153_MAPQ30_peak_4841 chr3 129686030 129686030 + 2.53401 NA Intergenic L2a|LINE|L2 -7206 NM_007117 7200 Hs.182231 NM_007117 HPRD:08944 TRH Pro-TRH|TRF thyrotropin-releasing hormone protein-coding Atac153_MAPQ30_peak_1022 chr10 133912367 133912367 + 2.53401 NA Intergenic Intergenic -5946 NM_001105521 282973 Hs.106254 NM_194303 HPRD:12574 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding Atac153_MAPQ30_peak_801 chr10 75586376 75586376 + 2.53401 NA intron (NM_172171, intron 13 of 20) intron (NM_172171, intron 13 of 20) -14787 NM_003635 8509 Hs.654758 NM_003635 HPRD:04465 NDST2 HSST2|NST2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 protein-coding Atac153_MAPQ30_peak_3039 chr18 29778454 29778454 + 2.53401 NA intron (NM_005925, intron 5 of 14) MER91A|DNA|hAT-Tip100 8467 NM_005925 4225 Hs.194777 NM_005925 HPRD:02667 MEP1B - meprin A, beta protein-coding Atac153_MAPQ30_peak_6905 chrX 9352024 9352024 + 2.53401 NA Intergenic MLT1J|LTR|ERVL-MaLR -79311 NM_001139468 6907 Hs.495656 NM_005647 HPRD:02183 TBL1X EBI|SMAP55|TBL1 transducin (beta)-like 1X-linked protein-coding Atac153_MAPQ30_peak_6208 chr7 153366793 153366793 + 2.53401 NA Intergenic LTR16B2|LTR|ERVL -217389 NM_001039350 1804 Hs.490684 NM_001936 HPRD:00525 DPP6 DPPX|VF2 dipeptidyl-peptidase 6 protein-coding Atac153_MAPQ30_peak_4072 chr20 33573928 33573928 + 2.53401 NA exon (NM_020884, exon 14 of 45) exon (NM_020884, exon 14 of 45) -4251 NR_030223 574501 NR_030223 MIR499A MIR499|MIRN499|hsa-mir-499a microRNA 499a ncRNA Atac153_MAPQ30_peak_4677 chr3 50158695 50158695 + 2.53401 NA Intergenic Intergenic -20274 NR_045388 100775107 Hs.439480 NR_045388 RBM5-AS1 LUST RBM5 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5368 chr5 107890921 107890921 + 2.53401 NA Intergenic Intergenic 173041 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA Atac153_MAPQ30_peak_4105 chr20 41350692 41350692 + 2.53401 NA intron (NM_133170, intron 6 of 31) intron (NM_133170, intron 6 of 31) 36569 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA Atac153_MAPQ30_peak_5284 chr5 30347561 30347561 + 2.53401 NA Intergenic Intergenic -846201 NM_004932 1004 Hs.124776 NM_004932 HPRD:04305 CDH6 CAD6|KCAD cadherin 6, type 2, K-cadherin (fetal kidney) protein-coding Atac153_MAPQ30_peak_1781 chr13 28367686 28367686 + 2.53401 NA intron (NM_145657, intron 1 of 1) CpG 906 NM_145657 219409 Hs.351785 NM_145657 GSX1 GSH1|Gsh-1 GS homeobox 1 protein-coding Atac153_MAPQ30_peak_6286 chr8 11617844 11617844 + 2.53401 NA promoter-TSS (NR_103552) promoter-TSS (NR_103552) -921 NR_103552 606553 Hs.545529 NM_001031839 C8orf49 G4DM chromosome 8 open reading frame 49 ncRNA Atac153_MAPQ30_peak_2289 chr15 84243743 84243743 + 2.53401 NA intron (NR_125370, intron 5 of 9) intron (NR_125370, intron 5 of 9) -79095 NM_207517 57188 Hs.459162 NM_207517 HPRD:12426 ADAMTSL3 ADAMTSL-3 ADAMTS-like 3 protein-coding Atac153_MAPQ30_peak_677 chr10 16640121 16640121 + 2.53401 NA intron (NM_152724, intron 7 of 7) MLT1D|LTR|ERVL-MaLR -76117 NM_001010908 389941 Hs.676792 NM_001010908 HPRD:16632 C1QL3 C1QTNF13|C1ql|CTRP13|K100 complement component 1, q subcomponent-like 3 protein-coding Atac153_MAPQ30_peak_556 chr1 226951483 226951483 + 2.53401 NA Intergenic Intergenic -24607 NM_002221 3707 Hs.528087 NM_002221 HPRD:00942 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding Atac153_MAPQ30_peak_4327 chr21 47675131 47675131 + 2.53401 NA intron (NM_003906, intron 17 of 27) L2a|LINE|L2 25986 NR_110566 114044 Hs.655095 NR_002776 ENSG00000215424 MCM3AP-AS1 C21orf85|MCM3AP-AS|MCM3APAS|MCM3APASB|NCRNA00031 MCM3AP antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5449 chr5 150527133 150527133 + 2.53401 NA intron (NM_001155, intron 2 of 25) MLT1K|LTR|ERVL-MaLR -5917 NM_001193544 309 Hs.412117 NM_001155 HPRD:00231 ANXA6 ANX6|CBP68 annexin A6 protein-coding Atac153_MAPQ30_peak_355 chr1 119496963 119496963 + 2.53401 NA intron (NM_152380, intron 1 of 7) intron (NM_152380, intron 1 of 7) 35216 NM_152380 6913 Hs.146196 NM_152380 HPRD:16035 TBX15 TBX14 T-box 15 protein-coding Atac153_MAPQ30_peak_1715 chr12 128517827 128517827 + 2.53401 NA Intergenic THE1B|LTR|ERVL-MaLR 84859 NR_104647 100996679 Hs.539127 NR_104647 ENSG00000256551 LOC100996679 - uncharacterized LOC100996679 ncRNA Atac153_MAPQ30_peak_3982 chr20 3053513 3053513 + 2.53401 NA TTS (NM_000915) TTS (NM_000915) 1247 NM_000915 5020 Hs.113216 NM_000915 HPRD:08880 OXT OT|OT-NPI|OXT-NPI oxytocin/neurophysin I prepropeptide protein-coding Atac153_MAPQ30_peak_3339 chr19 50508902 50508902 + 2.53401 NA intron (NM_001025778, intron 4 of 13) L1MB7|LINE|L1 19903 NM_016440 51231 Hs.443330 NM_016440 HPRD:18289 VRK3 - vaccinia related kinase 3 protein-coding Atac153_MAPQ30_peak_7070 chrX 65718253 65718253 + 2.53401 NA Intergenic Intergenic 117619 NM_001242310 60401 Hs.302017 NM_021783 HPRD:02230 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding Atac153_MAPQ30_peak_5318 chr5 63032778 63032778 + 2.53401 NA Intergenic Intergenic 225341 NM_000524 3350 Hs.247940 NM_000524 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled protein-coding Atac153_MAPQ30_peak_3636 chr2 98797183 98797183 + 2.53401 NA intron (NM_144992, intron 8 of 27) intron (NM_144992, intron 8 of 27) 93588 NM_144992 200403 Hs.269977 NM_144992 HPRD:14510 VWA3B - von Willebrand factor A domain containing 3B protein-coding Atac153_MAPQ30_peak_2655 chr17 2040908 2040908 + 2.53401 NA intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -48853 NM_001282326 23293 Hs.448342 NM_017575 HPRD:06502 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding Atac153_MAPQ30_peak_3294 chr19 38630701 38630701 + 2.53401 NA intron (NM_015073, intron 10 of 21) intron (NM_015073, intron 10 of 21) 84189 NM_001289978 8193 Hs.631576 NM_004647 HPRD:03393 DPF1 BAF45b|NEUD4|neuro-d4 D4, zinc and double PHD fingers family 1 protein-coding Atac153_MAPQ30_peak_954 chr10 125481133 125481133 + 2.53401 NA Intergenic Intergenic 55262 NM_153442 2849 Hs.12751 NM_153442 GPR26 - G protein-coupled receptor 26 protein-coding Atac153_MAPQ30_peak_1566 chr12 74507359 74507359 + 2.53401 NA Intergenic L1M1|LINE|L1 179052 NR_038300 100507377 Hs.738728 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA Atac153_MAPQ30_peak_6101 chr7 105449153 105449153 + 2.53401 NA intron (NM_152749, intron 2 of 3) intron (NM_152749, intron 2 of 3) 67878 NM_020725 222255 Hs.745056 NM_020725 HPRD:12508 ATXN7L1 ATXN7L4 ataxin 7-like 1 protein-coding Atac153_MAPQ30_peak_3696 chr2 121578601 121578601 + 2.53401 NA intron (NM_005270, intron 1 of 12) intron (NM_005270, intron 1 of 12) 23734 NM_005270 2736 Hs.111867 NM_005270 HPRD:01312 GLI2 HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding Atac153_MAPQ30_peak_4932 chr3 184759535 184759535 + 2.53401 NA intron (NM_001009921, intron 45 of 46) intron (NM_001009921, intron 45 of 46) 111267 NM_001025266 285382 Hs.380048 NM_001025266 HPRD:18774 C3orf70 - chromosome 3 open reading frame 70 protein-coding Atac153_MAPQ30_peak_2560 chr16 70785826 70785826 + 2.53401 NA intron (NM_018052, intron 12 of 18) intron (NM_018052, intron 12 of 18) -3137 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1024 chr10 134258550 134258550 + 2.53401 NA promoter-TSS (NM_173541) promoter-TSS (NM_173541) -164 NM_173541 170393 Hs.375059 NM_173541 C10orf91 bA432J24.4 chromosome 10 open reading frame 91 protein-coding Atac153_MAPQ30_peak_5470 chr5 156698440 156698440 + 2.53401 NA intron (NM_014376, intron 1 of 30) intron (NM_014376, intron 1 of 30) 2088 NM_014376 26999 Hs.519702 NM_014376 HPRD:07556 CYFIP2 PIR121 cytoplasmic FMR1 interacting protein 2 protein-coding Atac153_MAPQ30_peak_4722 chr3 57169968 57169968 + 2.53401 NA intron (NM_017563, intron 1 of 12) intron (NM_017563, intron 1 of 12) 29435 NM_017563 54756 Hs.150725 NM_017563 ENSG00000144730 IL17RD HH18|IL-17RD|IL17RLM|SEF interleukin 17 receptor D protein-coding Atac153_MAPQ30_peak_2395 chr16 11506591 11506591 + 2.53401 NA Intergenic Intergenic -52525 NR_110907 101927131 Hs.569654 NR_110907 ENSG00000262999 LOC101927131 - uncharacterized LOC101927131 ncRNA Atac153_MAPQ30_peak_6621 chr9 36905660 36905660 + 2.53401 NA intron (NR_103999, intron 6 of 8) intron (NR_103999, intron 6 of 8) -12132 NR_039687 100616456 NR_039687 MIR4476 - microRNA 4476 ncRNA Atac153_MAPQ30_peak_3767 chr2 147757249 147757249 + 2.53401 NA Intergenic HERV17-int|LTR|ERV1 412624 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein, cytoplasmic 1 pseudogene 2 pseudo Atac153_MAPQ30_peak_3401 chr2 8363117 8363117 + 2.53401 NA intron (NR_034135, intron 7 of 8) intron (NR_034135, intron 7 of 8) 105432 NR_034135 339789 Hs.565619 NM_207358 HPRD:14171 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA Atac153_MAPQ30_peak_4974 chr4 3597312 3597312 + 2.53401 NA Intergenic L1MEf|LINE|L1 18716 NR_040045 285492 Hs.145563 NM_173661 LINC00955 - long intergenic non-protein coding RNA 955 ncRNA Atac153_MAPQ30_peak_7017 chrX 47724158 47724158 + 2.53401 NA intron (NM_007137, intron 2 of 4) HERVL40-int|LTR|ERVL 27857 NM_007137 347344 Hs.114246 NM_007137 ENSG00000197779 ZNF81 HFZ20|MRX45|dJ54B20.6 zinc finger protein 81 protein-coding Atac153_MAPQ30_peak_3412 chr2 11518953 11518953 + 2.53401 NA Intergenic MIRb|SINE|MIR -15154 NR_047499 100874055 Hs.102428 NR_047499 ENSG00000224177 LINC00570 ncRNA-a5 long intergenic non-protein coding RNA 570 ncRNA Atac153_MAPQ30_peak_5539 chr5 178630469 178630469 + 2.53401 NA intron (NM_021599, intron 4 of 10) intron (NM_021599, intron 4 of 10) 141962 NM_021599 9509 Hs.23871 NM_014244 HPRD:05173 ADAMTS2 ADAM-TS2|ADAMTS-2|ADAMTS-3|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI ADAM metallopeptidase with thrombospondin type 1 motif, 2 protein-coding Atac153_MAPQ30_peak_620 chr1 246042483 246042483 + 2.53401 NA intron (NM_022743, intron 8 of 11) intron (NM_022743, intron 8 of 11) 538231 NM_022743 64754 Hs.567571 NM_022743 HPRD:12297 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding Atac153_MAPQ30_peak_6194 chr7 150964642 150964642 + 2.53401 NA intron (NM_001003802, intron 2 of 13) intron (NM_001003802, intron 2 of 13) 9178 NM_001003802 6604 Hs.647067 NM_003078 HPRD:03440 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding Atac153_MAPQ30_peak_2817 chr17 39659153 39659153 + 2.53401 NA intron (NM_153490, intron 4 of 7) intron (NM_153490, intron 4 of 7) 2712 NM_002274 3860 Hs.654550 NM_002274 HPRD:01016 KRT13 CK13|K13|WSN2 keratin 13 protein-coding Atac153_MAPQ30_peak_448 chr1 179786535 179786535 + 2.53401 NA Intergenic Intergenic 60406 NM_022347 163590 Hs.571797 NM_022347 HPRD:10048 TOR1AIP2 IFRG15|LULL1|NET9 torsin A interacting protein 2 protein-coding Atac153_MAPQ30_peak_2052 chr14 97636066 97636066 + 2.53401 NA Intergenic Intergenic 226150 NR_104113 145249 NR_104113 LINC00618 C14orf63 long intergenic non-protein coding RNA 618 ncRNA Atac153_MAPQ30_peak_571 chr1 229539548 229539548 + 2.53401 NA Intergenic Intergenic 30295 NM_001100 58 Hs.1288 NM_001100 HPRD:00030 ACTA1 ACTA|ASMA|CFTD|CFTD1|CFTDM|MPFD|NEM1|NEM2|NEM3 actin, alpha 1, skeletal muscle protein-coding Atac153_MAPQ30_peak_5317 chr5 62046836 62046836 + 2.53401 NA Intergenic Intergenic 172274 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding Atac153_MAPQ30_peak_223 chr1 42137046 42137046 + 2.53401 NA intron (NM_001127714, intron 1 of 7) intron (NM_001127714, intron 1 of 7) -186702 NM_001956 1907 Hs.1407 NM_001956 HPRD:07173 EDN2 ET2|PPET2 endothelin 2 protein-coding Atac153_MAPQ30_peak_6993 chrX 39782934 39782934 + 2.53401 NA Intergenic Intergenic 173785 NM_017745 54880 Hs.659681 NM_017745 HPRD:06458 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding Atac153_MAPQ30_peak_6947 chrX 21160759 21160759 + 2.53401 NA Intergenic L1M2b|LINE|L1 -231777 NM_001168649 22866 Hs.555917 NM_014927 HPRD:06473 CNKSR2 CNK2|KSR2|MAGUIN connector enhancer of kinase suppressor of Ras 2 protein-coding Atac153_MAPQ30_peak_3144 chr18 72847567 72847567 + 2.53401 NA Intergenic Intergenic 73714 NM_175907 284273 Hs.465433 NM_175907 ZADH2 - zinc binding alcohol dehydrogenase domain containing 2 protein-coding Atac153_MAPQ30_peak_4140 chr20 47244041 47244041 + 2.53401 NA intron (NM_020820, intron 39 of 39) intron (NM_020820, intron 39 of 39) 200379 NM_020820 57580 Hs.153310 NM_020820 HPRD:06066 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding Atac153_MAPQ30_peak_2161 chr15 52758336 52758336 + 2.53401 NA intron (NM_001142495, intron 1 of 39) L1M2|LINE|L1 62911 NM_001142495 4644 Hs.21213 NM_000259 HPRD:01179 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA (heavy chain 12, myoxin) protein-coding Atac153_MAPQ30_peak_6963 chrX 29748224 29748224 + 2.53401 NA intron (NM_014271, intron 6 of 10) intron (NM_014271, intron 6 of 10) -485451 NM_002364 4113 Hs.113824 NM_002364 HPRD:02109 MAGEB2 CT3.2|DAM6|MAGE-XP-2 melanoma antigen family B, 2 protein-coding Atac153_MAPQ30_peak_960 chr10 126148514 126148514 + 2.53401 NA Intergenic Intergenic -1827 NM_022126 64077 Hs.527748 NM_022126 HPRD:17274 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding Atac153_MAPQ30_peak_7122 chrX 87640163 87640163 + 2.53401 NA Intergenic L1PA17|LINE|L1 -362063 NM_033048 53336 Hs.458292 NM_033048 HPRD:06474 CPXCR1 CT77 CPX chromosome region, candidate 1 protein-coding Atac153_MAPQ30_peak_1748 chr12 132939830 132939830 + 2.53401 NA Intergenic L1MC2|LINE|L1 33394 NR_120467 101928416 NR_120467 LOC101928416 - uncharacterized LOC101928416 ncRNA Atac153_MAPQ30_peak_5700 chr6 46459949 46459949 + 2.53401 NA promoter-TSS (NM_001251974) promoter-TSS (NM_001251974) -145 NM_001251973 10231 Hs.440168 NM_005822 HPRD:05342 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding Atac153_MAPQ30_peak_3580 chr2 74062054 74062054 + 2.53401 NA intron (NM_201647, intron 2 of 9) L2a|LINE|L2 5929 NM_213622 10617 Hs.469018 NM_006463 HPRD:05877 STAMBP AMSH|MICCAP STAM binding protein protein-coding Atac153_MAPQ30_peak_5152 chr4 141208053 141208053 + 2.53401 NA intron (NR_033939, intron 4 of 4) intron (NR_033939, intron 4 of 4) 29613 NM_032547 60592 Hs.480815 NM_032547 HPRD:18027 SCOC SCOCO short coiled-coil protein protein-coding Atac153_MAPQ30_peak_2608 chr16 85126986 85126986 + 2.53401 NA 3' UTR (NM_001286566, exon 12 of 12) 3' UTR (NM_001286566, exon 12 of 12) 19128 NM_198491 339145 Hs.125713 NM_198491 HPRD:13488 FAM92B - family with sequence similarity 92, member B protein-coding Atac153_MAPQ30_peak_3158 chr18 74598934 74598934 + 2.53401 NA intron (NM_007345, intron 9 of 30) intron (NM_007345, intron 9 of 30) 62818 NM_007345 7776 Hs.719137 NM_007345 HPRD:05301 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding Atac153_MAPQ30_peak_2085 chr14 103592436 103592436 + 2.53401 NA promoter-TSS (NM_006291) promoter-TSS (NM_006291) -228 NM_006291 7127 Hs.525607 NM_006291 HPRD:04487 TNFAIP2 B94|EXOC3L3 tumor necrosis factor, alpha-induced protein 2 protein-coding Atac153_MAPQ30_peak_1373 chr11 126198953 126198953 + 2.53401 NA intron (NM_014026, intron 2 of 5) intron (NM_014026, intron 2 of 5) 25306 NM_014026 28960 Hs.504249 NM_014026 HPRD:16787 DCPS DCS1|HINT-5|HINT5|HSL1 decapping enzyme, scavenger protein-coding Atac153_MAPQ30_peak_2184 chr15 60803677 60803677 + 2.53401 NA exon (NM_134262, exon 4 of 10) exon (NM_134262, exon 4 of 10) 32300 NR_120342 101928784 Hs.655155 NR_120339 LOC101928784 - uncharacterized LOC101928784 ncRNA Atac153_MAPQ30_peak_1634 chr12 110219572 110219572 + 2.53401 NA Intergenic Intergenic -8280 NR_026662 84983 Hs.675961 NM_032897 ENSG00000255650 FAM222A-AS1 - FAM222A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4686 chr3 50562054 50562054 + 2.53401 NA Intergenic Intergenic -20379 NM_001291101 9254 Hs.476273 NM_006030 HPRD:06154 CACNA2D2 CACNA2D calcium channel, voltage-dependent, alpha 2/delta subunit 2 protein-coding Atac153_MAPQ30_peak_2931 chr17 73795722 73795722 + 2.53401 NA intron (NM_001080419, intron 1 of 15) intron (NM_001080419, intron 1 of 15) 14802 NM_001080419 85451 Hs.584768 NM_001080419 ENSG00000132478 UNK ZC3H5|ZC3HDC5 unkempt family zinc finger protein-coding Atac153_MAPQ30_peak_2546 chr16 68372273 68372273 + 2.53401 NA intron (NM_001290018, intron 7 of 18) intron (NM_001290018, intron 7 of 18) 27256 NM_001290018 54496 Hs.653193 NM_019023 HPRD:15174 PRMT7 - protein arginine methyltransferase 7 protein-coding Atac153_MAPQ30_peak_3836 chr2 204144938 204144938 + 2.53401 NA intron (NM_177538, intron 8 of 12) AluJr|SINE|Alu 41774 NM_177538 57404 Hs.446065 NM_020674 HPRD:07100 CYP20A1 CYP-M cytochrome P450, family 20, subfamily A, polypeptide 1 protein-coding Atac153_MAPQ30_peak_3384 chr2 2854623 2854623 + 2.53401 NA Intergenic Intergenic 275175 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA Atac153_MAPQ30_peak_3306 chr19 42306073 42306073 + 2.53401 NA intron (NM_001815, intron 2 of 6) intron (NM_001815, intron 2 of 6) 5551 NM_001815 1084 Hs.11 NM_001815 HPRD:16450 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen-related cell adhesion molecule 3 protein-coding Atac153_MAPQ30_peak_260 chr1 52399619 52399619 + 2.53401 NA intron (NM_002867, intron 3 of 4) intron (NM_002867, intron 3 of 4) -55010 NM_001101662 4898 Hs.584782 NM_002525 HPRD:04036 NRD1 hNRD1|hNRD2 nardilysin (N-arginine dibasic convertase) protein-coding Atac153_MAPQ30_peak_474 chr1 201504626 201504626 + 2.53401 NA Intergenic Intergenic 15594 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo Atac153_MAPQ30_peak_2889 chr17 61716127 61716127 + 2.53401 NA intron (NM_203351, intron 3 of 16) AluSx1|SINE|Alu 16326 NM_203351 4215 Hs.29282 NM_002401 HPRD:03965 MAP3K3 MAPKKK3|MEKK3 mitogen-activated protein kinase kinase kinase 3 protein-coding Atac153_MAPQ30_peak_7 chr1 1249093 1249093 + 2.53401 NA intron (NM_001256456, intron 11 of 18) intron (NM_001256456, intron 11 of 18) -1147 NR_106785 102465435 NR_106785 MIR6727 hsa-mir-6727 microRNA 6727 ncRNA Atac153_MAPQ30_peak_3522 chr2 46568119 46568119 + 2.53401 NA intron (NM_001430, intron 1 of 15) AluJo|SINE|Alu 43578 NM_001430 2034 Hs.468410 NM_001430 HPRD:06787 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding Atac153_MAPQ30_peak_5638 chr6 32864557 32864557 + 2.53401 NA intron (NR_037177, intron 1 of 1) intron (NR_037177, intron 1 of 1) 2604 NR_037177 100294145 Hs.559456 NR_037177 LOC100294145 - uncharacterized LOC100294145 ncRNA Atac153_MAPQ30_peak_1361 chr11 121218019 121218019 + 2.53401 NA Intergenic Intergenic 54442 NM_001024956 6309 Hs.287749 NM_006918 SC5D ERG3|S5DES|SC5DL sterol-C5-desaturase protein-coding Atac153_MAPQ30_peak_4435 chr22 37628720 37628720 + 2.53401 NA intron (NM_002872, intron 3 of 6) L2c|LINE|L2 11619 NM_002872 5880 Hs.517601 NM_002872 HPRD:03628 RAC2 EN-7|Gx|HSPC022|p21-Rac2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) protein-coding Atac153_MAPQ30_peak_4615 chr3 33957014 33957014 + 2.53401 NA Intergenic Intergenic 116951 NM_001162429 10015 Hs.475896 NM_013374 HPRD:06425 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding Atac153_MAPQ30_peak_1118 chr11 19842991 19842991 + 2.53401 NA intron (NM_182964, intron 1 of 37) intron (NM_182964, intron 1 of 37) -61362 NR_039843 100616426 NR_039843 miRBase:MI0017327 MIR4694 - microRNA 4694 ncRNA Atac153_MAPQ30_peak_2101 chr15 25932927 25932927 + 2.53401 NA exon (NM_024490, exon 16 of 21) exon (NM_024490, exon 16 of 21) 161045 NR_039865 100616474 NR_039865 MIR4715 - microRNA 4715 ncRNA Atac153_MAPQ30_peak_5166 chr4 153740374 153740374 + 2.53401 NA intron (NM_001287432, intron 2 of 9) L1PBa|LINE|L1 39285 NM_014447 27236 Hs.416089 NM_014447 HPRD:09331 ARFIP1 HSU52521 ADP-ribosylation factor interacting protein 1 protein-coding Atac153_MAPQ30_peak_20 chr1 3824242 3824242 + 2.53401 NA intron (NR_024455, intron 2 of 3) CpG 7274 NR_024455 100133612 Hs.307652 NR_024455 ENSG00000236423 LINC01134 - long intergenic non-protein coding RNA 1134 ncRNA Atac153_MAPQ30_peak_501 chr1 205139993 205139993 + 2.53401 NA intron (NM_199462, intron 2 of 11) MLT1J|LTR|ERVL-MaLR 40734 NM_015375 25778 Hs.6874 NM_015375 HPRD:11495 DSTYK CAKUT1|DustyPK|RIP5|RIPK5 dual serine/threonine and tyrosine protein kinase protein-coding Atac153_MAPQ30_peak_6975 chrX 35712425 35712425 + 2.53401 NA Intergenic L1PREC2|LINE|L1 -104034 NM_001099921 139604 Hs.700562 NM_001099921 ENSG00000189023 MAGEB16 - melanoma antigen family B, 16 protein-coding Atac153_MAPQ30_peak_1174 chr11 45840493 45840493 + 2.53401 NA Intergenic L2b|LINE|L2 13852 NM_018389 55343 Hs.12211 NM_018389 HPRD:09324 SLC35C1 CDG2C|FUCT1 solute carrier family 35 (GDP-fucose transporter), member C1 protein-coding Atac153_MAPQ30_peak_3990 chr20 5294564 5294564 + 2.53401 NA exon (NM_144773, exon 1 of 2) exon (NM_144773, exon 1 of 2) 451 NM_144773 128674 Hs.375029 NM_144773 HPRD:08453 PROKR2 GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3 prokineticin receptor 2 protein-coding Atac153_MAPQ30_peak_1555 chr12 65041798 65041798 + 2.53401 NA intron (NR_040718, intron 1 of 3) intron (NR_040718, intron 1 of 3) -25413 NR_037515 100500856 NR_037515 MIR548Z - microRNA 548z ncRNA Atac153_MAPQ30_peak_5863 chr6 169050529 169050529 + 2.53401 NA intron (NM_022138, intron 9 of 12) intron (NM_022138, intron 9 of 12) 208698 NM_001166412 64094 Hs.487200 NM_022138 HPRD:06244 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding Atac153_MAPQ30_peak_2044 chr14 95951487 95951487 + 2.53401 NA Intergenic Intergenic -9314 NM_152592 161176 Hs.354645 NM_152592 HPRD:12652 SYNE3 C14orf49|NET53|Nesp3 spectrin repeat containing, nuclear envelope family member 3 protein-coding Atac153_MAPQ30_peak_2579 chr16 76998857 76998857 + 2.53401 NA Intergenic Intergenic 96024 NR_039870 100616172 NR_039870 miRBase:MI0017354 MIR4719 - microRNA 4719 ncRNA Atac153_MAPQ30_peak_4115 chr20 42320892 42320892 + 2.53401 NA exon (NM_002466, exon 6 of 14) exon (NM_002466, exon 6 of 14) 25233 NM_001278610 4605 Hs.179718 NM_002466 HPRD:03247 MYBL2 B-MYB|BMYB v-myb avian myeloblastosis viral oncogene homolog-like 2 protein-coding Atac153_MAPQ30_peak_865 chr10 97250675 97250675 + 2.53401 NA intron (NM_001290294, intron 2 of 31) MIRc|SINE|MIR -49738 NM_001290296 10580 Hs.38621 NM_006434 HPRD:05587 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding Atac153_MAPQ30_peak_5010 chr4 8081265 8081265 + 2.53401 NA intron (NM_001130085, intron 5 of 17) intron (NM_001130085, intron 5 of 17) -7522 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family, member 2 protein-coding Atac153_MAPQ30_peak_1136 chr11 33631394 33631394 + 2.53401 NA exon (NM_012194, exon 14 of 20) exon (NM_012194, exon 14 of 20) 67517 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549-like protein-coding Atac153_MAPQ30_peak_6735 chr9 103056417 103056417 + 2.53401 NA intron (NR_051962, intron 15 of 17) AluJb|SINE|Alu 58436 NM_001161584 54881 Hs.494648 NM_017746 HPRD:15489 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding Atac153_MAPQ30_peak_1581 chr12 93637979 93637979 + 2.53401 NA intron (NR_040096, intron 2 of 4) Tigger12|DNA|TcMar-Tigger 69837 NR_120492 102724933 Hs.663947 NR_120492 LOC102724933 - uncharacterized LOC102724933 ncRNA Atac153_MAPQ30_peak_4816 chr3 126385545 126385545 + 2.53401 NA intron (NR_034158, intron 3 of 4) MIR|SINE|MIR 4621 NR_034158 255330 Hs.145435 NM_174935 ENSG00000198284 NUP210P1 C3orf46 nucleoporin 210kDa pseudogene 1 pseudo Atac153_MAPQ30_peak_3934 chr2 238456843 238456843 + 2.53401 NA intron (NR_104019, intron 14 of 16) MIRc|SINE|MIR -18374 NM_015893 51052 Hs.247710 NM_015893 HPRD:04046 PRLH PRH|PRRP prolactin releasing hormone protein-coding Atac153_MAPQ30_peak_7191 chrX 122395318 122395318 + 2.53401 NA intron (NM_007325, intron 3 of 15) intron (NM_007325, intron 3 of 15) 77222 NM_001256743 2892 Hs.377070 NM_000828 HPRD:02378 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate receptor, ionotropic, AMPA 3 protein-coding Atac153_MAPQ30_peak_4275 chr21 39493406 39493406 + 2.53401 NA promoter-TSS (NM_005867) promoter-TSS (NM_005867) 48 NM_005867 10281 Hs.23251 NM_005867 HPRD:05318 DSCR4 DCRB|DSCRB Down syndrome critical region gene 4 protein-coding Atac153_MAPQ30_peak_5995 chr7 47708399 47708399 + 2.53401 NA Intergenic Intergenic 13557 NM_001123065 401335 Hs.520816 NM_001123065 ENSG00000221845 C7orf65 - chromosome 7 open reading frame 65 protein-coding Atac153_MAPQ30_peak_344 chr1 116675013 116675013 + 2.53401 NA intron (NM_152367, intron 6 of 6) L2b|LINE|L2 20637 NM_152367 126868 Hs.376194 NM_152367 HPRD:08245 MAB21L3 C1orf161 mab-21-like 3 (C. elegans) protein-coding Atac153_MAPQ30_peak_1187 chr11 47496829 47496829 + 2.53401 NA intron (NM_198700, intron 11 of 13) intron (NM_198700, intron 11 of 13) 13747 NM_001025596 10658 Hs.595333 NM_006560 HPRD:03046 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP, Elav-like family member 1 protein-coding Atac153_MAPQ30_peak_1762 chr13 22469492 22469492 + 2.53401 NA Intergenic Intergenic -17193 NR_047040 100874182 Hs.148951 NR_047040 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA Atac153_MAPQ30_peak_6904 chrX 9336320 9336320 + 2.53401 NA Intergenic MLT1E3|LTR|ERVL-MaLR -95015 NM_001139468 6907 Hs.495656 NM_005647 HPRD:02183 TBL1X EBI|SMAP55|TBL1 transducin (beta)-like 1X-linked protein-coding Atac153_MAPQ30_peak_2953 chr17 77136801 77136801 + 2.53401 NA intron (NM_001082575, intron 4 of 14) intron (NM_001082575, intron 4 of 14) 65782 NM_001042573 64772 Hs.29288 NM_022759 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding Atac153_MAPQ30_peak_3171 chr18 77475256 77475256 + 2.53401 NA exon (NM_004715, exon 8 of 13) exon (NM_004715, exon 8 of 13) 33826 NM_001202504 9150 Hs.465490 NM_004715 HPRD:05377 CTDP1 CCFDN|FCP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein-coding Atac153_MAPQ30_peak_2389 chr16 10725519 10725519 + 2.53401 NA intron (NM_144674, intron 6 of 6) MLT1C|LTR|ERVL-MaLR -50980 NM_001424 2013 Hs.531561 NM_001424 HPRD:11893 EMP2 NPHS10|XMP epithelial membrane protein 2 protein-coding Atac153_MAPQ30_peak_2751 chr17 20515053 20515053 + 2.53401 NA Intergenic Intergenic 32016 NM_001190790 256223 Hs.131916 NM_001190790 ENSG00000214819 CDRT15L2 - CMT1A duplicated region transcript 15-like 2 protein-coding Atac153_MAPQ30_peak_3096 chr18 46549576 46549576 + 2.53401 NA Intergenic Intergenic 26562 NR_039898 100616420 NR_039898 MIR4744 - microRNA 4744 ncRNA Atac153_MAPQ30_peak_2649 chr17 836419 836419 + 2.53401 NA intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 46579 NM_022463 64359 Hs.527989 NM_022463 HPRD:14858 NXN NRX|TRG-4 nucleoredoxin protein-coding Atac153_MAPQ30_peak_5401 chr5 133032143 133032143 + 2.53401 NA Intergenic Intergenic -83920 NM_015082 23105 Hs.483390 NM_015082 HPRD:17022 FSTL4 - follistatin-like 4 protein-coding Atac153_MAPQ30_peak_4337 chr22 19965024 19965024 + 2.53401 NA exon (NM_001670, exon 9 of 20) exon (NM_001670, exon 9 of 20) 13748 NR_039918 100616414 NR_039918 MIR4761 - microRNA 4761 ncRNA Atac153_MAPQ30_peak_4727 chr3 58647428 58647428 + 2.53401 NA intron (NM_138805, intron 1 of 9) MIR|SINE|MIR 5133 NM_138805 131177 Hs.61265 NM_138805 HPRD:12271 FAM3D EF7|OIT1 family with sequence similarity 3, member D protein-coding Atac153_MAPQ30_peak_4223 chr21 11071692 11071692 + 2.53401 NA intron (NM_001187, intron 3 of 4) L1MDa|LINE|L1 27233 NM_181704 85317 Hs.545789 NM_181704 BAGE4 CT2.4|MLL3P B melanoma antigen family, member 4 protein-coding Atac153_MAPQ30_peak_2684 chr17 6683458 6683458 + 2.53401 NA exon (NM_153230, exon 2 of 4) exon (NM_153230, exon 2 of 4) 3906 NM_153230 162517 Hs.368364 NM_153230 HPRD:16444 FBXO39 CT144|Fbx39 F-box protein 39 protein-coding Atac153_MAPQ30_peak_2877 chr17 56412441 56412441 + 2.53401 NA TTS (NR_039889) TTS (NR_039889) 942 NR_039889 100616220 NR_039889 miRBase:MI0017373 MIR4736 - microRNA 4736 ncRNA Atac153_MAPQ30_peak_2612 chr16 85570793 85570793 + 2.53401 NA Intergenic Intergenic -74236 NM_001134473 23199 Hs.461647 NM_014615 HPRD:11066 GSE1 KIAA0182 Gse1 coiled-coil protein protein-coding Atac153_MAPQ30_peak_433 chr1 173514143 173514143 + 2.53401 NA intron (NM_178527, intron 13 of 27) L1PA6|LINE|L1 58090 NM_178527 284525 Hs.494981 NM_178527 HPRD:15398 SLC9C2 SLC9A11 solute carrier family 9, member C2 (putative) protein-coding Atac153_MAPQ30_peak_1430 chr12 2921675 2921675 + 2.53401 NA promoter-TSS (NM_018463) promoter-TSS (NM_018463) -112 NM_018463 55846 Hs.446098 NM_018463 HPRD:14379 ITFG2 MDS028 integrin alpha FG-GAP repeat containing 2 protein-coding Atac153_MAPQ30_peak_2378 chr16 8307937 8307937 + 2.53401 NA Intergenic Intergenic 279891 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding Atac153_MAPQ30_peak_6232 chr7 158343743 158343743 + 2.53401 NA intron (NM_002847, intron 1 of 22) intron (NM_002847, intron 1 of 22) -18238 NR_030325 693180 NR_030325 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA Atac153_MAPQ30_peak_6348 chr8 38835669 38835669 + 2.53401 NA intron (NM_153692, intron 4 of 8) intron (NM_153692, intron 4 of 8) 4001 NM_153692 203100 Hs.661014 NM_153692 HPRD:08818 HTRA4 - HtrA serine peptidase 4 protein-coding Atac153_MAPQ30_peak_1896 chr14 23643709 23643709 + 2.53401 NA intron (NM_012244, intron 1 of 10) intron (NM_012244, intron 1 of 10) 9160 NM_012244 23428 Hs.596643 NM_012244 HPRD:11971 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 (amino acid transporter light chain, L system), member 8 protein-coding Atac153_MAPQ30_peak_1040 chr11 2350218 2350218 + 2.53401 NA non-coding (NR_108080, exon 3 of 3) non-coding (NR_108080, exon 3 of 3) 26975 NM_139022 10077 Hs.271954 NM_005705 HPRD:04834 TSPAN32 ART1|PHEMX|PHMX|TSSC6 tetraspanin 32 protein-coding Atac153_MAPQ30_peak_4774 chr3 98364090 98364090 + 2.53401 NA Intergenic L1PB1|LINE|L1 -51635 NM_000097 1371 Hs.476982 NM_000097 HPRD:00417 CPOX CPO|CPX|HCP coproporphyrinogen oxidase protein-coding Atac153_MAPQ30_peak_3482 chr2 29501899 29501899 + 2.53401 NA intron (NM_004304, intron 9 of 28) intron (NM_004304, intron 9 of 28) 163607 NM_024692 79745 Hs.122927 NM_024692 HPRD:08634 CLIP4 RSNL2 CAP-GLY domain containing linker protein family, member 4 protein-coding Atac153_MAPQ30_peak_5097 chr4 64680656 64680656 + 2.53401 NA Intergenic L1PA13|LINE|L1 594522 NM_001010874 253017 Hs.227752 NM_001010874 TECRL GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase-like protein-coding Atac153_MAPQ30_peak_2621 chr16 86557168 86557168 + 2.53401 NA Intergenic MIR3|SINE|MIR 13035 NM_001451 2294 Hs.155591 NM_001451 HPRD:03053 FOXF1 ACDMPV|FKHL5|FREAC1 forkhead box F1 protein-coding Atac153_MAPQ30_peak_4875 chr3 139474112 139474112 + 2.53401 NA Intergenic L2b|LINE|L2 -77227 NM_178177 349565 Hs.208673 NM_178177 HPRD:16370 NMNAT3 PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding Atac153_MAPQ30_peak_1846 chr13 96357607 96357607 + 2.53401 NA intron (NM_006260, intron 1 of 11) ERVL-E-int|LTR|ERVL 28214 NM_006260 5611 Hs.59214 NM_006260 HPRD:03114 DNAJC3 ERdj6|HP58|P58|P58IPK|PRKRI DnaJ (Hsp40) homolog, subfamily C, member 3 protein-coding Atac153_MAPQ30_peak_4312 chr21 45273360 45273360 + 2.53401 NA Intergenic Intergenic -11756 NM_020132 56894 Hs.248785 NM_020132 HPRD:10637 AGPAT3 LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding Atac153_MAPQ30_peak_1316 chr11 112679590 112679590 + 2.53401 NA Intergenic Intergenic -152379 NM_181351 4684 Hs.503878 NM_000615 HPRD:00301 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_2342 chr15 101566088 101566088 + 2.53401 NA intron (NM_024652, intron 16 of 33) intron (NM_024652, intron 16 of 33) 106628 NM_024652 79705 Hs.407918 NM_024652 HPRD:14319 LRRK1 RIPK6|Roco1 leucine-rich repeat kinase 1 protein-coding Atac153_MAPQ30_peak_3180 chr19 1452619 1452619 + 2.53401 NA intron (NM_005883, intron 1 of 14) intron (NM_005883, intron 1 of 14) 2471 NM_005883 10297 Hs.446376 NM_005883 HPRD:09802 APC2 APCL adenomatosis polyposis coli 2 protein-coding Atac153_MAPQ30_peak_180 chr1 34002530 34002530 + 2.53401 NA intron (NM_052896, intron 61 of 69) intron (NM_052896, intron 61 of 69) 64298 NM_145238 7579 Hs.442705 NM_145238 HPRD:15769 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding Atac153_MAPQ30_peak_1678 chr12 121347453 121347453 + 2.53401 NA Intergenic L2c|LINE|L2 -5298 NM_139015 121665 Hs.507087 NM_139015 HPRD:09744 SPPL3 IMP2|MDHV1887|PRO4332|PSH1|PSL4 signal peptide peptidase like 3 protein-coding Atac153_MAPQ30_peak_6853 chr9 138045311 138045311 + 2.53401 NA Intergenic Intergenic -28144 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA Atac153_MAPQ30_peak_5670 chr6 40312415 40312415 + 2.53401 NA non-coding (NR_038887, exon 3 of 3) non-coding (NR_038887, exon 3 of 3) 11330 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA Atac153_MAPQ30_peak_4355 chr22 24158704 24158704 + 2.53401 NA intron (NM_001007468, intron 5 of 8) intron (NM_001007468, intron 5 of 8) 22495 NM_198440 91319 Hs.593679 NM_198440 HPRD:13139 DERL3 C22orf14|IZP6|LLN2|derlin-3 derlin 3 protein-coding Atac153_MAPQ30_peak_1973 chr14 71786914 71786914 + 2.53401 NA Intergenic CpG -78140 NR_001276 319139 NR_001276 ENSG00000207444 SNORD56B RNU56B small nucleolar RNA, C/D box 56B snoRNA Atac153_MAPQ30_peak_3063 chr18 36113225 36113225 + 2.53401 NA Intergenic L1M3c|LINE|L1 876127 NR_036202 100422857 NR_036202 miRBase:MI0015847 MIR4318 - microRNA 4318 ncRNA Atac153_MAPQ30_peak_4897 chr3 158561742 158561742 + 2.53401 NA Intergenic Intergenic 42027 NM_001167903 64747 Hs.58663 NM_022736 HPRD:07851 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding Atac153_MAPQ30_peak_5489 chr5 169121692 169121692 + 2.53401 NA intron (NM_004946, intron 9 of 51) intron (NM_004946, intron 9 of 51) 57441 NM_004946 1794 Hs.586174 NM_004946 HPRD:09121 DOCK2 - dedicator of cytokinesis 2 protein-coding Atac153_MAPQ30_peak_2476 chr16 30666937 30666937 + 2.53401 NA intron (NM_024031, intron 10 of 11) intron (NM_024031, intron 10 of 11) 4696 NM_024031 78994 Hs.293629 NM_024031 HPRD:14541 PRR14 - proline rich 14 protein-coding Atac153_MAPQ30_peak_2615 chr16 86169091 86169091 + 2.53401 NA Intergenic MLT1J2|LTR|ERVL-MaLR -60696 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA Atac153_MAPQ30_peak_968 chr10 126915971 126915971 + 2.53401 NA Intergenic Intergenic -66347 NM_001083914 1488 Hs.501345 NM_001329 HPRD:04016 CTBP2 - C-terminal binding protein 2 protein-coding Atac153_MAPQ30_peak_1413 chr11 134283928 134283928 + 2.53401 NA Intergenic MIR3|SINE|MIR -2116 NM_018644 27087 Hs.381050 NM_018644 HPRD:06969 B3GAT1 CD57|GLCATP|GLCUATP|HNK1|LEU7|NK-1|NK1 beta-1,3-glucuronyltransferase 1 protein-coding Atac153_MAPQ30_peak_966 chr10 126777022 126777022 + 2.53401 NA intron (NM_001290214, intron 2 of 10) intron (NM_001290214, intron 2 of 10) -55583 NR_036178 100423041 NR_036178 MIR4296 - microRNA 4296 ncRNA Atac153_MAPQ30_peak_6223 chr7 157509996 157509996 + 2.53401 NA intron (NM_130842, intron 11 of 21) intron (NM_130842, intron 11 of 21) -137281 NR_038966 100506585 Hs.661265 NR_038966 ENSG00000233038 LOC100506585 - uncharacterized LOC100506585 ncRNA Atac153_MAPQ30_peak_4378 chr22 27920870 27920870 + 2.53401 NA Intergenic MIR3|SINE|MIR 276616 NM_002430 4330 Hs.268515 NM_002430 HPRD:08862 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 meningioma (disrupted in balanced translocation) 1 protein-coding Atac153_MAPQ30_peak_5874 chr6 170528031 170528031 + 2.53401 NA Intergenic Intergenic 43626 NR_002787 154449 Hs.447751 NR_002787 ENSG00000230960 LOC154449 - uncharacterized LOC154449 ncRNA Atac153_MAPQ30_peak_6392 chr8 60704502 60704502 + 2.53401 NA Intergenic L1MA4|LINE|L1 489452 NM_004056 767 Hs.654388 NM_004056 CA8 CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase VIII protein-coding Atac153_MAPQ30_peak_4961 chr4 1854390 1854390 + 2.53401 NA intron (NM_012318, intron 1 of 13) AluJo|SINE|Alu 3584 NM_012318 3954 Hs.120165 NM_012318 HPRD:05101 LETM1 - leucine zipper-EF-hand containing transmembrane protein 1 protein-coding Atac153_MAPQ30_peak_2098 chr15 25176937 25176937 + 2.53401 NA intron (NM_022808, intron 3 of 11) AluSz|SINE|Alu -23133 NM_022804 8926 Hs.564847 NM_005678 HPRD:18083 SNURF - SNRPN upstream reading frame protein-coding Atac153_MAPQ30_peak_5257 chr5 10039251 10039251 + 2.53401 NA Intergenic Intergenic -135315 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LOC285692 - uncharacterized LOC285692 ncRNA Atac153_MAPQ30_peak_4470 chr22 44754898 44754898 + 2.53401 NA Intergenic MER31B|LTR|ERV1 -46167 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 KIAA1644 - KIAA1644 protein-coding Atac153_MAPQ30_peak_3074 chr18 44018290 44018290 + 2.53401 NA intron (NM_152470, intron 3 of 7) intron (NM_152470, intron 3 of 7) 80759 NM_001173129 125336 Hs.345877 NM_144612 HPRD:08316 LOXHD1 DFNB77|LH2D1 lipoxygenase homology domains 1 protein-coding Atac153_MAPQ30_peak_1328 chr11 115029645 115029645 + 2.53401 NA Intergenic Intergenic 345596 NM_014333 23705 Hs.370510 NM_014333 HPRD:05746 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_2638 chr16 88784666 88784666 + 2.53401 NA intron (NM_001142864, intron 44 of 50) L1MB7|LINE|L1 -1921 NR_039873 100616167 NR_039873 MIR4722 - microRNA 4722 ncRNA Atac153_MAPQ30_peak_986 chr10 130162252 130162252 + 2.53401 NA Intergenic Intergenic 78038 NR_120619 101927381 Hs.523342 NR_120619 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA Atac153_MAPQ30_peak_2418 chr16 16210979 16210979 + 2.53401 NA intron (NM_004996, intron 23 of 30) THE1C|LTR|ERVL-MaLR 106349 NM_001171 368 Hs.442182 NM_001171 HPRD:04453 ABCC6 ABC34|ARA|EST349056|GACI2|MLP1|MOAT-E|MOATE|MRP6|PXE|PXE1|URG7 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 protein-coding Atac153_MAPQ30_peak_6988 chrX 39026233 39026233 + 2.53401 NA Intergenic Intergenic 160383 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA Atac153_MAPQ30_peak_5290 chr5 33049360 33049360 + 2.53401 NA Intergenic L1M2a|LINE|L1 101811 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LOC340113 - uncharacterized LOC340113 ncRNA Atac153_MAPQ30_peak_1522 chr12 53042789 53042789 + 2.53401 NA intron (NM_000423, intron 4 of 8) intron (NM_000423, intron 4 of 8) 3170 NM_000423 3849 Hs.707 NM_000423 HPRD:02560 KRT2 CK-2e|K2e|KRT2A|KRT2E|KRTE keratin 2 protein-coding Atac153_MAPQ30_peak_6751 chr9 113169906 113169906 + 2.53401 NA exon (NM_153366, exon 38 of 48) exon (NM_153366, exon 38 of 48) -69742 NM_001286947 255220 Hs.147064 NM_001003936 HPRD:18251 TXNDC8 SPTRX-3|TRX6|bA427L11.2 thioredoxin domain containing 8 (spermatozoa) protein-coding Atac153_MAPQ30_peak_6035 chr7 66919975 66919975 + 2.53401 NA Intergenic MER5A|DNA|hAT-Charlie 119012 NR_108104 101929736 Hs.634050 NR_108104 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA Atac153_MAPQ30_peak_3964 chr2 242591700 242591700 + 2.53401 NA intron (NM_013325, intron 3 of 12) intron (NM_013325, intron 3 of 12) 14673 NM_178326 23192 Hs.283610 NM_013325 HPRD:16499 ATG4B APG4B|AUTL1 autophagy related 4B, cysteine peptidase protein-coding Atac153_MAPQ30_peak_2352 chr16 682971 682971 + 2.53401 NA exon (NM_053284, exon 2 of 2) exon (NM_053284, exon 2 of 2) 1959 NM_053284 117166 Hs.345818 NM_053284 HPRD:12153 WFIKKN1 C16orf12|RJD2|WFDC20A|WFIKKN WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 protein-coding Atac153_MAPQ30_peak_89 chr1 15761435 15761435 + 2.53401 NA Intergenic MIR|SINE|MIR -3503 NM_007272 11330 Hs.631869 NM_007272 HPRD:03242 CTRC CLCR|ELA4 chymotrypsin C (caldecrin) protein-coding Atac153_MAPQ30_peak_832 chr10 81365947 81365947 + 2.53401 NA Intergenic MER52-int|LTR|ERV1 -4748 NM_001164647 653509 Hs.535295 NM_005411 ENSG00000122852 SFTPA1 COLEC4|PSAP|PSP-A|PSPA|SFTP1|SFTPA1B|SP-A|SP-A1|SPA|SPA1 surfactant protein A1 protein-coding Atac153_MAPQ30_peak_162 chr1 30176491 30176491 + 2.53401 NA Intergenic Intergenic 333968 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LOC101929406 - uncharacterized LOC101929406 ncRNA Atac153_MAPQ30_peak_4757 chr3 72202290 72202290 + 2.53401 NA intron (NR_038221, intron 1 of 2) intron (NR_038221, intron 1 of 2) 1882 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA Atac153_MAPQ30_peak_3983 chr20 3116050 3116050 + 2.53401 NA intron (NM_199415, intron 1 of 3) intron (NM_199415, intron 1 of 3) 24482 NM_021826 60493 Hs.741168 NM_021826 HPRD:07813 FASTKD5 dJ1187M17.5 FAST kinase domains 5 protein-coding Atac153_MAPQ30_peak_4989 chr4 5971414 5971414 + 2.53401 NA Intergenic MIRb|SINE|MIR -46359 NR_039608 100616201 NR_039608 miRBase:MI0016749 MIR378D1 - microRNA 378d-1 ncRNA Atac153_MAPQ30_peak_7016 chrX 47447789 47447789 + 2.53401 NA TTS (NR_039926) TTS (NR_039926) 961 NR_039926 100616147 NR_039926 miRBase:MI0017410 MIR4769 - microRNA 4769 ncRNA Atac153_MAPQ30_peak_4456 chr22 41993554 41993554 + 2.53401 NA TTS (NM_015704) TTS (NM_015704) -7683 NM_002676 5372 Hs.75835 NM_002676 HPRD:03473 PMM1 Sec53 phosphomannomutase 1 protein-coding Atac153_MAPQ30_peak_6711 chr9 97859313 97859313 + 2.53401 NA Intergenic MER20|DNA|hAT-Charlie -10937 NR_036109 100422842 NR_036109 miRBase:MI0014181 MIR3074 - microRNA 3074 ncRNA Atac153_MAPQ30_peak_2798 chr17 32483487 32483487 + 2.53401 NA exon (NM_001094, exon 1 of 10) exon (NM_001094, exon 1 of 10) 338 NM_001094 40 Hs.368417 NM_001094 HPRD:03471 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid-sensing (proton-gated) ion channel 2 protein-coding Atac153_MAPQ30_peak_3695 chr2 121569797 121569797 + 2.53401 NA intron (NM_005270, intron 1 of 12) intron (NM_005270, intron 1 of 12) 14930 NM_005270 2736 Hs.111867 NM_005270 HPRD:01312 GLI2 HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding Atac153_MAPQ30_peak_6869 chr9 140340619 140340619 + 2.53401 NA Intergenic Intergenic 3919 NR_106964 102466223 NR_106964 MIR7114 hsa-mir-7114 microRNA 7114 ncRNA Atac153_MAPQ30_peak_4328 chr21 47732289 47732289 + 2.53401 NA intron (NM_001286477, intron 5 of 7) AluSq2|SINE|Alu 5845 NM_001286463 54058 Hs.236572 NM_058180 HPRD:10755 C21orf58 - chromosome 21 open reading frame 58 protein-coding Atac153_MAPQ30_peak_5542 chr5 179023248 179023248 + 2.53401 NA non-coding (NR_110560, exon 9 of 9) non-coding (NR_110560, exon 9 of 9) 7494 NR_110560 101928445 Hs.663255 NR_110560 LOC101928445 - uncharacterized LOC101928445 ncRNA Atac153_MAPQ30_peak_6451 chr8 104950205 104950205 + 2.53401 NA intron (NM_001100117, intron 13 of 23) AluJo|SINE|Alu 118789 NM_001282881 9699 Hs.655271 NM_014677 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding Atac153_MAPQ30_peak_406 chr1 160159704 160159704 + 2.53401 NA promoter-TSS (NM_001231) promoter-TSS (NM_001231) -581 NM_001231 844 Hs.632476 NM_001231 HPRD:15915 CASQ1 CASQ|PDIB1 calsequestrin 1 (fast-twitch, skeletal muscle) protein-coding Atac153_MAPQ30_peak_493 chr1 204329947 204329947 + 2.53401 NA promoter-TSS (NM_014935) promoter-TSS (NM_014935) -890 NM_014935 22874 Hs.253146 NM_014935 HPRD:09685 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing, family A member 6 protein-coding Atac153_MAPQ30_peak_1134 chr11 32275998 32275998 + 2.53401 NA Intergenic Intergenic 163521 NM_002901 5954 Hs.97887 NM_002901 HPRD:04111 RCN1 HEL-S-84|PIG20|RCAL|RCN reticulocalbin 1, EF-hand calcium binding domain protein-coding Atac153_MAPQ30_peak_1784 chr13 29956245 29956245 + 2.53401 NA intron (NM_001033602, intron 6 of 13) L2a|LINE|L2 -46532 NM_015233 23281 Hs.22287 NM_015233 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated tumor suppressor candidate 2 protein-coding Atac153_MAPQ30_peak_5429 chr5 140802939 140802939 + 2.53401 NA exon (NM_018914, exon 1 of 4) exon (NM_018914, exon 1 of 4) 2402 NM_032092 56105 Hs.368160 NM_018914 HPRD:09388 PCDHGA11 PCDH-GAMMA-A11 protocadherin gamma subfamily A, 11 protein-coding Atac153_MAPQ30_peak_6803 chr9 127300145 127300145 + 2.53401 NA intron (NM_033334, intron 6 of 9) intron (NM_033334, intron 6 of 9) -30446 NM_004959 2516 Hs.495108 NM_004959 HPRD:01702 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXY3 nuclear receptor subfamily 5, group A, member 1 protein-coding Atac153_MAPQ30_peak_4742 chr3 66517332 66517332 + 2.53401 NA intron (NM_015541, intron 1 of 18) intron (NM_015541, intron 1 of 18) 33513 NM_015541 26018 Hs.518055 NM_015541 HPRD:10057 LRIG1 LIG-1|LIG1 leucine-rich repeats and immunoglobulin-like domains 1 protein-coding Atac153_MAPQ30_peak_7150 chrX 106805913 106805913 + 2.53401 NA intron (NM_032428, intron 11 of 15) intron (NM_032428, intron 11 of 15) -16862 NR_046750 100874122 Hs.600967 NR_046750 FRMPD3-AS1 - FRMPD3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5084 chr4 54791316 54791316 + 2.53401 NA Intergenic Intergenic 62133 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo Atac153_MAPQ30_peak_2581 chr16 77469075 77469075 + 2.53401 NA promoter-TSS (NM_199355) promoter-TSS (NM_199355) -64 NM_199355 170692 Hs.188746 NM_139054 HPRD:06333 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif, 18 protein-coding Atac153_MAPQ30_peak_4028 chr20 22584022 22584022 + 2.53401 NA intron (NR_109883, intron 1 of 2) LTR81B|LTR|Gypsy 4133 NR_109883 101929685 Hs.563018 NR_109883 LINC01384 - long intergenic non-protein coding RNA 1384 ncRNA Atac153_MAPQ30_peak_5361 chr5 95811127 95811127 + 2.53401 NA Intergenic Intergenic -42142 NM_000439 5122 Hs.78977 NM_000439 HPRD:01201 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding Atac153_MAPQ30_peak_537 chr1 221068505 221068505 + 2.53401 NA Intergenic Intergenic -15023 NR_046901 100873924 Hs.645593 NR_046901 HLX-AS1 - HLX antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6366 chr8 47030754 47030754 + 2.53401 NA Intergenic GSAT|Satellite|centr -721754 NR_027012 497634 Hs.406982 NR_027012 ENSG00000253314 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA Atac153_MAPQ30_peak_88 chr1 15712523 15712523 + 2.53401 NA intron (NM_052929, intron 30 of 30) MIR|SINE|MIR -23868 NM_024329 79180 Hs.465374 NM_024329 HPRD:13266 EFHD2 SWS1 EF-hand domain family, member D2 protein-coding Atac153_MAPQ30_peak_5543 chr5 179249784 179249784 + 2.53401 NA intron (NM_003900, intron 1 of 7) intron (NM_003900, intron 1 of 7) 1942 NM_003900 8878 Hs.724025 NM_003900 HPRD:03319 SQSTM1 A170|OSIL|PDB3|ZIP3|p60|p62|p62B sequestosome 1 protein-coding Atac153_MAPQ30_peak_5988 chr7 46790091 46790091 + 2.53401 NA Intergenic Intergenic -829220 NM_001013398 3486 Hs.450230 NM_000598 HPRD:00899 IGFBP3 BP-53|IBP3 insulin-like growth factor binding protein 3 protein-coding Atac153_MAPQ30_peak_3046 chr18 33779745 33779745 + 2.53401 NA exon (NM_017947, exon 4 of 15) exon (NM_017947, exon 4 of 15) 12265 NM_017947 55034 Hs.405028 NM_017947 MOCOS HMCS|MCS|MOS molybdenum cofactor sulfurase protein-coding Atac153_MAPQ30_peak_6839 chr9 136245680 136245680 + 2.53401 NA promoter-TSS (NM_001280788) promoter-TSS (NM_001280788) -860 NM_001280788 6836 Hs.512465 NM_033161 HPRD:01715 SURF4 ERV29 surfeit 4 protein-coding Atac153_MAPQ30_peak_1884 chr13 113464600 113464600 + 2.53401 NA intron (NM_032189, intron 4 of 28) L1M5|LINE|L1 -55555 NR_046661 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_351 chr1 117661155 117661155 + 2.53401 NA exon (NM_001145635, exon 2 of 6) exon (NM_001145635, exon 2 of 6) 3256 NM_001145635 80263 Hs.301526 NM_025188 HPRD:15562 TRIM45 RNF99 tripartite motif containing 45 protein-coding Atac153_MAPQ30_peak_6752 chr9 114044157 114044157 + 2.53401 NA Intergenic AluSx|SINE|Alu -10663 NR_106989 102465800 NR_106989 MIR7702 hsa-mir-7702 microRNA 7702 ncRNA Atac153_MAPQ30_peak_6351 chr8 40254149 40254149 + 2.53401 NA Intergenic LTR33|LTR|ERVL 243162 NM_020130 56892 Hs.591849 NM_020130 HPRD:09650 C8orf4 TC-1|TC1 chromosome 8 open reading frame 4 protein-coding Atac153_MAPQ30_peak_6292 chr8 18003448 18003448 + 2.53401 NA Intergenic Intergenic -24523 NM_001291962 9 Hs.591847 NM_000662 HPRD:00149 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 (arylamine N-acetyltransferase) protein-coding Atac153_MAPQ30_peak_5789 chr6 135237553 135237553 + 2.53401 NA TTS (NM_001193480) TTS (NM_001193480) 33707 NM_170771 64577 Hs.486520 NM_022568 HPRD:06974 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family, member A1 protein-coding Atac153_MAPQ30_peak_1013 chr10 132834756 132834756 + 2.53401 NA Intergenic Intergenic -58725 NR_120623 101927489 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5195 chr4 184991436 184991436 + 2.53401 NA Intergenic MSTA|LTR|ERVL-MaLR 147678 NM_153343 133121 Hs.297814 NM_153343 HPRD:16863 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding Atac153_MAPQ30_peak_6841 chr9 136819548 136819548 + 2.53401 NA intron (NM_003371, intron 1 of 26) intron (NM_003371, intron 1 of 26) 37898 NM_003371 7410 Hs.369921 NM_003371 HPRD:02694 VAV2 VAV-2 vav 2 guanine nucleotide exchange factor protein-coding Atac153_MAPQ30_peak_945 chr10 124290706 124290706 + 2.53401 NA Intergenic MLT1D|LTR|ERVL-MaLR -29475 NM_017579 1755 Hs.279611 NM_004406 HPRD:03575 DMBT1 GP340|muclin deleted in malignant brain tumors 1 protein-coding Atac153_MAPQ30_peak_6431 chr8 97728014 97728014 + 2.53401 NA intron (NM_016134, intron 1 of 7) L1PB3|LINE|L1 70559 NM_016134 10404 Hs.156178 NM_016134 HPRD:07140 CPQ LDP|PGCP carboxypeptidase Q protein-coding Atac153_MAPQ30_peak_1140 chr11 34173924 34173924 + 2.53401 NA 3' UTR (NM_145804, exon 17 of 17) 3' UTR (NM_145804, exon 17 of 17) 46813 NM_001144030 55226 Hs.577281 NM_024662 HPRD:10964 NAT10 ALP|NET43 N-acetyltransferase 10 (GCN5-related) protein-coding Atac153_MAPQ30_peak_4217 chr20 62234450 62234450 + 2.53401 NA intron (NM_012384, intron 3 of 9) intron (NM_012384, intron 3 of 9) 23931 NM_012384 26205 Hs.473286 NM_012384 HPRD:16245 GMEB2 P79PIF|PIF79 glucocorticoid modulatory element binding protein 2 protein-coding Atac153_MAPQ30_peak_6102 chr7 105603282 105603282 + 2.53401 NA promoter-TSS (NM_152750) promoter-TSS (NM_152750) -375 NM_152750 222256 Hs.150120 NM_152750 HPRD:08042 CDHR3 CDH28 cadherin-related family member 3 protein-coding Atac153_MAPQ30_peak_3364 chr19 58952750 58952750 + 2.53401 NA Intergenic L2|LINE|L2 -1161 NM_003433 7691 Hs.156169 NM_003433 HPRD:07240 ZNF132 pHZ-12 zinc finger protein 132 protein-coding Atac153_MAPQ30_peak_4868 chr3 138322961 138322961 + 2.53401 NA Intergenic THE1A-int|LTR|ERVL-MaLR -4581 NM_001033031 55179 Hs.173438 NM_018147 HPRD:16874 FAIM FAIM1 Fas apoptotic inhibitory molecule protein-coding Atac153_MAPQ30_peak_4015 chr20 19234977 19234977 + 2.53401 NA intron (NR_024564, intron 6 of 7) intron (NR_024564, intron 6 of 7) 30263 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA Atac153_MAPQ30_peak_5978 chr7 43917802 43917802 + 2.53401 NA exon (NM_017920, exon 5 of 5) exon (NM_017920, exon 5 of 5) -8657 NM_032014 64951 Hs.284286 NM_032014 HPRD:17593 MRPS24 MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding Atac153_MAPQ30_peak_3662 chr2 108941017 108941017 + 2.53401 NA intron (NR_037191, intron 1 of 3) intron (NR_037191, intron 1 of 3) 2323 NR_037191 151234 Hs.447681 NR_037191 ENSG00000237223 SULT1C2P1 SULT1C1P sulfotransferase family, cytosolic, 1C, member 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_5447 chr5 149821722 149821722 + 2.53401 NA Intergenic Intergenic 7597 NM_005617 6208 Hs.744846 NM_005617 HPRD:00562 RPS14 EMTB|S14 ribosomal protein S14 protein-coding Atac153_MAPQ30_peak_7092 chrX 70830817 70830817 + 2.53401 NA intron (NM_052957, intron 11 of 12) intron (NM_052957, intron 11 of 12) 7550 NM_001504 2833 Hs.198252 NM_001504 HPRD:02936 CXCR3 CD182|CD183|CKR-L2|CMKAR3|GPR9|IP10-R|Mig-R|MigR chemokine (C-X-C motif) receptor 3 protein-coding Atac153_MAPQ30_peak_3652 chr2 105878995 105878995 + 2.53401 NA Intergenic MSTB|LTR|ERVL-MaLR 20795 NM_007227 11250 Hs.590903 NM_007227 HPRD:05325 GPR45 PSP24|PSP24(ALPHA)|PSP24A G protein-coupled receptor 45 protein-coding Atac153_MAPQ30_peak_3763 chr2 137425918 137425918 + 2.53401 NA Intergenic THE1D-int|LTR|ERVL-MaLR -322544 NM_001080427 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin, type I, domain containing 7B protein-coding Atac153_MAPQ30_peak_5627 chr6 30158611 30158611 + 2.53401 NA intron (NM_003449, intron 6 of 9).8 MLT1J|LTR|ERVL-MaLR 22660 NM_003449 7726 Hs.485041 NM_003449 HPRD:02901 TRIM26 AFP|RNF95|ZNF173 tripartite motif containing 26 protein-coding Atac153_MAPQ30_peak_4645 chr3 40729613 40729613 + 2.53401 NA Intergenic LTR16A2|LTR|ERVL 163244 NM_001098414 285268 Hs.19977 NM_198484 ZNF621 - zinc finger protein 621 protein-coding Atac153_MAPQ30_peak_3585 chr2 75385212 75385212 + 2.53401 NA intron (NM_015727, intron 1 of 3) MIR3|SINE|MIR 41433 NM_015727 6869 Hs.633301 NM_001058 HPRD:01208 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding Atac153_MAPQ30_peak_957 chr10 125686898 125686898 + 2.53401 NA Intergenic MIR|SINE|MIR -35398 NM_198148 119587 Hs.656887 NM_198148 HPRD:08517 CPXM2 CPX2|UNQ676 carboxypeptidase X (M14 family), member 2 protein-coding Atac153_MAPQ30_peak_191 chr1 35129323 35129323 + 2.53401 NA Intergenic Intergenic -91325 NM_005268 2709 Hs.198249 NM_005268 HPRD:06840 GJB5 CX31.1 gap junction protein, beta 5, 31.1kDa protein-coding Atac153_MAPQ30_peak_4306 chr21 44269819 44269819 + 2.53401 NA non-coding (NR_048535, exon 11 of 11) non-coding (NR_048535, exon 11 of 11) 29566 NM_001260477 10785 Hs.248815 NM_018669 HPRD:09330 WDR4 TRM82|TRMT82 WD repeat domain 4 protein-coding Atac153_MAPQ30_peak_2111 chr15 27927485 27927485 + 2.53401 NA Intergenic Intergenic 416973 NM_001300984 4948 Hs.654411 NM_000275 HPRD:01945 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 oculocutaneous albinism II protein-coding Atac153_MAPQ30_peak_3285 chr19 34295954 34295954 + 2.53401 NA intron (NM_001129995, intron 4 of 6) AluJr|SINE|Alu 8203 NM_024076 79047 Hs.221873 NM_024076 HPRD:13765 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding Atac153_MAPQ30_peak_4991 chr4 6302410 6302410 + 2.53401 NA exon (NM_001145853, exon 8 of 8) exon (NM_001145853, exon 8 of 8) 30833 NM_006005 7466 Hs.518602 NM_006005 HPRD:05864 WFS1 CTRCT41|WFRS|WFS|WFSL Wolfram syndrome 1 (wolframin) protein-coding Atac153_MAPQ30_peak_6204 chr7 152454237 152454237 + 2.53401 NA Intergenic Intergenic -2597 NM_020445 57180 Hs.647117 NM_020445 HPRD:12489 ACTR3B ARP11|ARP3BETA ARP3 actin-related protein 3 homolog B (yeast) protein-coding Atac153_MAPQ30_peak_1652 chr12 114104893 114104893 + 2.53401 NA Intergenic Intergenic 106595 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 - long intergenic non-protein coding RNA 1234 ncRNA Atac153_MAPQ30_peak_646 chr10 4863717 4863717 + 2.53401 NA Intergenic Intergenic -4652 NM_001271021 83592 Hs.657944 NM_031436 HPRD:07472 AKR1E2 AKR1CL2|AKRDC1|LoopADR|hTSP|htAKR aldo-keto reductase family 1, member E2 protein-coding Atac153_MAPQ30_peak_4381 chr22 28143298 28143298 + 2.53401 NA TTS (NM_002430) TTS (NM_002430) 54188 NM_002430 4330 Hs.268515 NM_002430 HPRD:08862 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 meningioma (disrupted in balanced translocation) 1 protein-coding Atac153_MAPQ30_peak_1704 chr12 125676597 125676597 + 2.53401 NA Intergenic Intergenic 126672 NM_023928 65985 Hs.656073 NM_023928 HPRD:12391 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding Atac153_MAPQ30_peak_1964 chr14 69088881 69088881 + 2.53401 NA Intergenic Intergenic 171750 NM_004926 677 Hs.85155 NM_004926 HPRD:03041 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding Atac153_MAPQ30_peak_3800 chr2 174763422 174763422 + 2.53401 NA Intergenic Intergenic 65525 NM_001017371 6670 Hs.531587 NM_003111 HPRD:03483 SP3 SPR2 Sp3 transcription factor protein-coding Atac153_MAPQ30_peak_2790 chr17 30103724 30103724 + 2.53401 NA Intergenic Intergenic 82602 NM_018405 55352 Hs.462729 NM_018405 HPRD:13675 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5, differentiation stimulator protein-coding Atac153_MAPQ30_peak_6048 chr7 68415231 68415231 + 2.53401 NA Intergenic Intergenic 647250 NR_108105 100507468 Hs.362492 NR_108105 LOC100507468 - uncharacterized LOC100507468 ncRNA Atac153_MAPQ30_peak_2788 chr17 28287176 28287176 + 2.53401 NA intron (NR_026738, intron 3 of 15) L1M1|LINE|L1 18553 NR_026738 374786 Hs.662411 NM_198529 HPRD:13528 EFCAB5 - EF-hand calcium binding domain 5 protein-coding Atac153_MAPQ30_peak_6754 chr9 114733237 114733237 + 2.53401 NA Intergenic 7SLRNA|srpRNA|srpRNA 38857 NR_039814 100616114 NR_039814 MIR4668 - microRNA 4668 ncRNA Atac153_MAPQ30_peak_1288 chr11 83404760 83404760 + 2.53401 NA intron (NM_001364, intron 13 of 22) intron (NM_001364, intron 13 of 22) -11292 NM_001142702 1740 Hs.367656 NM_001364 HPRD:04663 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs, large homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_6672 chr9 87410993 87410993 + 2.53401 NA intron (NM_001018064, intron 11 of 16) MLT1J|LTR|ERVL-MaLR 125701 NM_001018064 4915 Hs.494312 NM_006180 HPRD:02712 NTRK2 GP145-TrkB|TRKB|trk-B neurotrophic tyrosine kinase, receptor, type 2 protein-coding Atac153_MAPQ30_peak_3622 chr2 95939655 95939655 + 2.53401 NA promoter-TSS (NM_001165977) promoter-TSS (NM_001165977) -546 NM_144707 150696 Hs.437376 NM_144707 HPRD:17912 PROM2 PROML2 prominin 2 protein-coding Atac153_MAPQ30_peak_357 chr1 120059312 120059312 + 2.53401 NA Intergenic Intergenic 9486 NM_000862 3283 Hs.364941 NM_000862 HPRD:04920 HSD3B1 3BETAHSD|HSD3B|HSDB3|HSDB3A|I|SDR11E1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 protein-coding Atac153_MAPQ30_peak_7013 chrX 47059863 47059863 + 2.53401 NA intron (NM_003334, intron 5 of 25) L2c|LINE|L2 -4384 NR_024616 8552 Hs.657350 NM_003669 INE1 NCRNA00010 inactivation escape 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4099 chr20 40467849 40467849 + 2.53401 NA Intergenic Intergenic -220716 NM_032221 84181 Hs.740645 NM_032221 HPRD:13049 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding Atac153_MAPQ30_peak_3795 chr2 173265070 173265070 + 2.53401 NA Intergenic Intergenic -27244 NM_000210 3655 Hs.133397 NM_000210 HPRD:00945 ITGA6 CD49f|ITGA6B|VLA-6 integrin, alpha 6 protein-coding Atac153_MAPQ30_peak_1247 chr11 70397590 70397590 + 2.53401 NA intron (NR_110766, intron 2 of 8) intron (NR_110766, intron 2 of 8) -79609 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4417 chr22 34843365 34843365 + 2.53401 NA Intergenic MIR3|SINE|MIR -526949 NM_004737 9215 Hs.474667 NM_004737 HPRD:04665 LARGE MDC1D|MDDGA6|MDDGB6 like-glycosyltransferase protein-coding Atac153_MAPQ30_peak_1536 chr12 56292884 56292884 + 2.53401 NA Intergenic L2b|LINE|L2 28025 NM_001143853 84305 Hs.505687 NM_032345 HPRD:17940 WIBG PYM within bgcn homolog (Drosophila) protein-coding Atac153_MAPQ30_peak_129 chr1 21551720 21551720 + 2.53401 NA intron (NM_001113348, intron 17 of 18) CpG -48339 NM_001198801 8672 Hs.467084 NM_003760 HPRD:06802 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma, 3 protein-coding Atac153_MAPQ30_peak_2033 chr14 93709007 93709007 + 2.53401 NA exon (NM_001289133, exon 9 of 9) exon (NM_001289133, exon 9 of 9) -35548 NM_032490 84520 Hs.20142 NM_032490 HPRD:16608 C14orf142 PNAS-127 chromosome 14 open reading frame 142 protein-coding Atac153_MAPQ30_peak_6570 chr8 146049252 146049252 + 2.53401 NA Intergenic Intergenic -3651 NM_001282797 7553 Hs.493218 NM_003416 HPRD:01918 ZNF7 HF.16|KOX4|zf30 zinc finger protein 7 protein-coding Atac153_MAPQ30_peak_59 chr1 9688326 9688326 + 2.53401 NA Intergenic AluSx|SINE|Alu -23464 NM_005026 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta protein-coding Atac153_MAPQ30_peak_4433 chr22 37476496 37476496 + 2.53401 NA intron (NM_001289001, intron 10 of 17) intron (NM_001289001, intron 10 of 17) 23197 NM_153609 164656 Hs.370885 NM_153609 HPRD:10270 TMPRSS6 IRIDA transmembrane protease, serine 6 protein-coding Atac153_MAPQ30_peak_3455 chr2 23777931 23777931 + 2.53401 NA intron (NM_052920, intron 2 of 13) intron (NM_052920, intron 2 of 13) 169633 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch-like family member 29 protein-coding Atac153_MAPQ30_peak_6837 chr9 135910881 135910881 + 2.53401 NA intron (NM_001286709, intron 1 of 8) HERVI-int|LTR|ERV1 4819 NM_001122823 9328 Hs.495417 NM_012087 HPRD:16077 GTF3C5 TFIIIC63|TFIIICepsilon|TFiiiC2-63 general transcription factor IIIC, polypeptide 5, 63kDa protein-coding Atac153_MAPQ30_peak_3926 chr2 237354991 237354991 + 2.53401 NA intron (NM_001270585, intron 6 of 18) intron (NM_001270585, intron 6 of 18) 57349 NM_001270585 79781 Hs.591594 NM_024726 HPRD:13743 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding Atac153_MAPQ30_peak_91 chr1 16272342 16272342 + 2.53401 NA intron (NM_001242884, intron 4 of 14) intron (NM_001242884, intron 4 of 14) 30285 NM_001287603 7709 Hs.433764 NM_003443 HPRD:04968 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding Atac153_MAPQ30_peak_3892 chr2 228835804 228835804 + 2.53401 NA Intergenic Intergenic 99477 NM_178821 164781 Hs.424594 NM_178821 HPRD:08079 DAW1 ODA16|WDR69 dynein assembly factor with WDR repeat domains 1 protein-coding Atac153_MAPQ30_peak_1722 chr12 129465165 129465165 + 2.53401 NA intron (NM_144669, intron 7 of 7) MLT1H|LTR|ERVL-MaLR 127084 NM_144669 144423 Hs.655668 NM_144669 HPRD:08115 GLT1D1 - glycosyltransferase 1 domain containing 1 protein-coding Atac153_MAPQ30_peak_2082 chr14 103046423 103046423 + 2.53401 NA Intergenic Intergenic -12573 NM_015156 23186 Hs.510521 NM_015156 HPRD:09645 RCOR1 COREST|RCOR REST corepressor 1 protein-coding Atac153_MAPQ30_peak_1142 chr11 35125258 35125258 + 2.53401 NA Intergenic LTR33|LTR|ERVL 34321 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA Atac153_MAPQ30_peak_4653 chr3 42916252 42916252 + 2.53401 NA exon (NM_004391, exon 1 of 1) exon (NM_004391, exon 1 of 1) 1381 NM_004391 1582 Hs.447793 NM_004391 HPRD:03705 CYP8B1 CP8B|CYP12 cytochrome P450, family 8, subfamily B, polypeptide 1 protein-coding Atac153_MAPQ30_peak_284 chr1 67095947 67095947 + 2.53401 NA intron (NM_032291, intron 2 of 24) intron (NM_032291, intron 2 of 24) 1824 NR_036060 100422871 NR_036060 MIR3117 - microRNA 3117 ncRNA Atac153_MAPQ30_peak_6927 chrX 17949781 17949781 + 2.53401 NA Intergenic MER5B|DNA|hAT-Charlie -70324 NM_001172739 10742 Hs.446680 NM_021785 HPRD:02199 RAI2 - retinoic acid induced 2 protein-coding Atac153_MAPQ30_peak_52 chr1 8421735 8421735 + 2.53401 NA intron (NM_001042682, intron 7 of 12) intron (NM_001042682, intron 7 of 12) 43590 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5 solute carrier family 45, member 1 protein-coding Atac153_MAPQ30_peak_2582 chr16 78269856 78269856 + 2.53401 NA intron (NM_001291997, intron 4 of 7) MER58A|DNA|hAT-Charlie 136546 NR_120435 51741 Hs.461453 NM_016373 HPRD:05501 WWOX D16S432E|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding Atac153_MAPQ30_peak_1340 chr11 117096286 117096286 + 2.53401 NA intron (NM_004716, intron 6 of 16) intron (NM_004716, intron 6 of 16) 6955 NM_004716 9159 Hs.648612 NM_004716 PCSK7 LPC|PC7|PC8|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding Atac153_MAPQ30_peak_3113 chr18 54752729 54752729 + 2.53401 NA Intergenic Intergenic -13379 NR_048536 100885779 Hs.742426 NR_048536 ENSG00000258609 LINC-ROR lincRNA-RoR long intergenic non-protein coding RNA, regulator of reprogramming ncRNA Atac153_MAPQ30_peak_2331 chr15 99081449 99081449 + 2.53401 NA Intergenic Intergenic -23838 NM_182562 283777 Hs.668070 NM_182562 HPRD:08265 FAM169B - family with sequence similarity 169, member B protein-coding Atac153_MAPQ30_peak_2630 chr16 87687645 87687645 + 2.53401 NA intron (NR_073379, intron 2 of 5) intron (NR_073379, intron 2 of 5) 51152 NM_001271605 57338 Hs.592068 NM_020655 HPRD:05589 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding Atac153_MAPQ30_peak_998 chr10 130908538 130908538 + 2.53401 NA Intergenic Intergenic -356916 NM_002412 4255 Hs.501522 NM_002412 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding Atac153_MAPQ30_peak_6802 chr9 127219843 127219843 + 2.53401 NA Intergenic Intergenic -42091 NM_002799 5695 Hs.213470 NM_002799 HPRD:04940 PSMB7 Z proteasome (prosome, macropain) subunit, beta type, 7 protein-coding Atac153_MAPQ30_peak_3567 chr2 70185174 70185174 + 2.53401 NA Intergenic Intergenic 4223 NM_152792 151516 Hs.516253 NM_152792 HPRD:08683 ASPRV1 MUNO|SASP|SASPase|Taps aspartic peptidase, retroviral-like 1 protein-coding Atac153_MAPQ30_peak_5958 chr7 33712927 33712927 + 2.53401 NA Intergenic Intergenic -231596 NM_133468 168667 Hs.660998 NM_133468 HPRD:16368 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding Atac153_MAPQ30_peak_1135 chr11 33565444 33565444 + 2.53401 NA exon (NM_012194, exon 1 of 20) exon (NM_012194, exon 1 of 20) 1567 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549-like protein-coding Atac153_MAPQ30_peak_353 chr1 118193941 118193941 + 2.53401 NA Intergenic L2b|LINE|L2 45337 NM_017709 54855 Hs.356216 NM_017709 HPRD:13312 FAM46C - family with sequence similarity 46, member C protein-coding Atac153_MAPQ30_peak_2849 chr17 46549911 46549911 + 2.53401 NA Intergenic Intergenic 27716 NR_110804 101927166 Hs.149244 NR_110804 LOC101927166 - uncharacterized LOC101927166 ncRNA Atac153_MAPQ30_peak_3735 chr2 131742998 131742998 + 2.53401 NA intron (NM_032995, intron 3 of 11) LOR1b|LTR|ERV1 68028 NM_032995 50649 Hs.469935 NM_015320 HPRD:05559 ARHGEF4 ASEF|ASEF1|GEF4|STM6 Rho guanine nucleotide exchange factor (GEF) 4 protein-coding Atac153_MAPQ30_peak_2913 chr17 70259959 70259959 + 2.53401 NA Intergenic Intergenic 142798 NM_000346 6662 Hs.647409 NM_000346 HPRD:06427 SOX9 CMD1|CMPD1|SRA1 SRY (sex determining region Y)-box 9 protein-coding Atac153_MAPQ30_peak_937 chr10 122340457 122340457 + 2.53401 NA intron (NM_001030059, intron 6 of 6) intron (NM_001030059, intron 6 of 6) -4134 NR_049879 100847064 NR_049879 miRBase:MI0019301 MIR5694 - microRNA 5694 ncRNA Atac153_MAPQ30_peak_2495 chr16 49005822 49005822 + 2.53401 NA Intergenic Intergenic 309920 NM_004352 869 Hs.458423 NM_004352 HPRD:02697 CBLN1 - cerebellin 1 precursor protein-coding Atac153_MAPQ30_peak_3860 chr2 217398642 217398642 + 2.53401 NA Intergenic Intergenic 35122 NM_000998 6168 Hs.433701 NM_000998 RPL37A L37A ribosomal protein L37a protein-coding Atac153_MAPQ30_peak_4758 chr3 72250958 72250958 + 2.53401 NA Intergenic Intergenic 50550 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA Atac153_MAPQ30_peak_4161 chr20 50879063 50879063 + 2.53401 NA Intergenic Intergenic -70539 NM_199427 55734 Hs.473082 NM_018197 HPRD:15728 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding Atac153_MAPQ30_peak_3091 chr18 46237803 46237803 + 2.53401 NA intron (NM_014772, intron 6 of 11) intron (NM_014772, intron 6 of 11) 40832 NR_039897 100616366 NR_039897 MIR4743 - microRNA 4743 ncRNA Atac153_MAPQ30_peak_4934 chr3 185938763 185938763 + 2.53401 NA intron (NM_001080744, intron 19 of 23) intron (NM_001080744, intron 19 of 23) -111862 NM_004454 2119 Hs.43697 NM_004454 HPRD:09035 ETV5 ERM ets variant 5 protein-coding Atac153_MAPQ30_peak_3393 chr2 6359884 6359884 + 2.53401 NA Intergenic MIR|SINE|MIR 155670 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA Atac153_MAPQ30_peak_6357 chr8 41499594 41499594 + 2.53401 NA Intergenic MLT1A1|LTR|ERVL-MaLR 5284 NM_152568 157848 Hs.647132 NM_152568 NKX6-3 NKX6.3 NK6 homeobox 3 protein-coding Atac153_MAPQ30_peak_5877 chr7 42516 42516 + 2.53401 NA Intergenic Intergenic -107202 NR_108065 100507642 Hs.557780 NR_108064 LOC100507642 - uncharacterized LOC100507642 ncRNA Atac153_MAPQ30_peak_3199 chr19 4990433 4990433 + 2.53401 NA intron (NM_015015, intron 1 of 22) intron (NM_015015, intron 1 of 22) 21309 NM_015015 23030 Hs.654816 NM_015015 HPRD:11056 KDM4B JMJD2B|TDRD14B lysine (K)-specific demethylase 4B protein-coding Atac153_MAPQ30_peak_4502 chr22 47830675 47830675 + 2.53401 NA Intergenic Intergenic 52185 NR_109967 101927722 Hs.589927 NR_109967 ENSG00000218357 LOC101927722 - uncharacterized LOC101927722 ncRNA Atac153_MAPQ30_peak_2019 chr14 90054821 90054821 + 2.53401 NA intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) 12261 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 - FOXN3 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_1574 chr12 85332147 85332147 + 2.53401 NA Intergenic L1MA2|LINE|L1 -25539 NM_001146335 55117 Hs.44424 NM_018057 HPRD:12141 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 (neutral amino acid transporter), member 15 protein-coding Atac153_MAPQ30_peak_732 chr10 45916006 45916006 + 2.53401 NA intron (NM_001256153, intron 4 of 13) intron (NM_001256153, intron 4 of 13) 32563 NR_120674 102724323 Hs.559151 NR_120674 LOC102724323 - uncharacterized LOC102724323 ncRNA Atac153_MAPQ30_peak_2477 chr16 30761240 30761240 + 2.53401 NA intron (NM_000294, intron 2 of 9) L2c|LINE|L2 1620 NM_000294 5261 Hs.65735 NM_000294 HPRD:01405 PHKG2 GSD9C phosphorylase kinase, gamma 2 (testis) protein-coding Atac153_MAPQ30_peak_3121 chr18 57137227 57137227 + 2.53401 NA intron (NM_133459, intron 3 of 10) intron (NM_133459, intron 3 of 10) -110719 NM_005570 3998 Hs.465295 NM_005570 HPRD:03338 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose-binding, 1 protein-coding Atac153_MAPQ30_peak_4888 chr3 144043151 144043151 + 2.53401 NA Intergenic L1MA2|LINE|L1 350984 NM_001134470 205428 Hs.288954 NM_173552 HPRD:14559 C3orf58 DIA1|GoPro49|HASF chromosome 3 open reading frame 58 protein-coding Atac153_MAPQ30_peak_655 chr10 7303845 7303845 + 2.53401 NA intron (NM_001018039, intron 7 of 20) intron (NM_001018039, intron 7 of 20) 147458 NM_001018039 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm-like with four mbt domains 2 protein-coding Atac153_MAPQ30_peak_5891 chr7 2167717 2167717 + 2.53401 NA intron (NM_001013836, intron 11 of 18) intron (NM_001013836, intron 11 of 18) 104866 NM_003550 8379 Hs.654838 NM_003550 HPRD:04065 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 MAD1 mitotic arrest deficient-like 1 (yeast) protein-coding Atac153_MAPQ30_peak_5066 chr4 42235560 42235560 + 2.53401 NA Intergenic Intergenic -80665 NM_001159547 389206 Hs.120591 NM_207406 HPRD:13481 BEND4 CCDC4 BEN domain containing 4 protein-coding Atac153_MAPQ30_peak_7291 chrX 153688305 153688305 + 2.53401 NA intron (NM_017514, intron 1 of 32) intron (NM_017514, intron 1 of 32) 1684 NM_017514 55558 Hs.632839 NM_017514 HPRD:02062 PLXNA3 6.3|HSSEXGENE|PLXN3|PLXN4|XAP-6 plexin A3 protein-coding Atac153_MAPQ30_peak_615 chr1 244530801 244530801 + 2.53401 NA intron (NM_001012970, intron 2 of 4) intron (NM_001012970, intron 2 of 4) 14864 NM_001276348 200159 Hs.442703 NM_001012970 HPRD:13168 C1orf100 - chromosome 1 open reading frame 100 protein-coding Atac153_MAPQ30_peak_1386 chr11 128813302 128813302 + 2.53401 NA promoter-TSS (NM_001195195) promoter-TSS (NM_001195195) -8 NM_022112 63970 Hs.160953 NM_022112 HPRD:10397 TP53AIP1 P53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 protein-coding Atac153_MAPQ30_peak_7100 chrX 71535310 71535310 + 2.53401 NA Intergenic MIR|SINE|MIR -8273 NM_001144886 4435 Hs.40403 NM_004143 HPRD:02146 CITED1 MSG1 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 protein-coding Atac153_MAPQ30_peak_6753 chr9 114288596 114288596 + 2.53401 NA intron (NM_001007169, intron 1 of 5) intron (NM_001007169, intron 1 of 5) 1157 NM_133464 158399 Hs.660784 NM_133464 HPRD:18345 ZNF483 ZKSCAN16|ZSCAN48 zinc finger protein 483 protein-coding Atac153_MAPQ30_peak_4084 chr20 35475831 35475831 + 2.53401 NA intron (NM_080627, intron 1 of 14) L2b|LINE|L2 12445 NM_199181 140710 Hs.460807 NM_080627 HPRD:11116 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding Atac153_MAPQ30_peak_6478 chr8 128255837 128255837 + 2.53401 NA Intergenic Intergenic -1045 NR_117099 103021164 Hs.571531 NR_117099 CASC21 CARLo-2|LINC01244 cancer susceptibility candidate 21 (non-protein coding) ncRNA Atac153_MAPQ30_peak_5570 chr6 4985132 4985132 + 2.53401 NA Intergenic Intergenic 19165 NM_001286133 10799 Hs.511756 NM_006638 HPRD:09361 RPP40 RNASEP1|bA428J1.3 ribonuclease P/MRP 40kDa subunit protein-coding Atac153_MAPQ30_peak_4321 chr21 46284977 46284977 + 2.53401 NA intron (NM_004339, intron 2 of 5) intron (NM_004339, intron 2 of 5) 8841 NM_004339 754 Hs.474010 NM_004339 HPRD:04807 PTTG1IP C21orf1|C21orf3|PBF pituitary tumor-transforming 1 interacting protein protein-coding Atac153_MAPQ30_peak_5123 chr4 89249779 89249779 + 2.53401 NA Intergenic MER21A|LTR|ERVL -43796 NM_152542 152926 Hs.43744 NM_152542 HPRD:15167 PPM1K BDP|MSUDMV|PP2Ckappa|PP2Cm|PTMP|UG0882E07 protein phosphatase, Mg2+/Mn2+ dependent, 1K protein-coding Atac153_MAPQ30_peak_704 chr10 31099584 31099584 + 2.53401 NA Intergenic Intergenic 118381 NR_036438 645954 Hs.408581 NR_036438 ENSG00000234814 SVILP1 - supervillin pseudogene 1 pseudo Atac153_MAPQ30_peak_7140 chrX 102997699 102997699 + 2.53401 NA Intergenic AluJb|SINE|Alu -14147 NM_001172285 441509 Hs.533289 NM_001024452 ENSG00000188828 GLRA4 - glycine receptor, alpha 4 protein-coding Atac153_MAPQ30_peak_3654 chr2 106077549 106077549 + 2.53401 NA Intergenic Intergenic -22319 NM_201557 2274 Hs.443687 NM_001450 HPRD:04026 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding Atac153_MAPQ30_peak_2412 chr16 14402149 14402149 + 2.53401 NA promoter-TSS (NR_029854) promoter-TSS (NR_029854) -993 NR_029854 100126355 NR_029854 miRBase:MI0000767 MIR365A MIR365-1|MIRN365-1|hsa-mir-365a microRNA 365a ncRNA Atac153_MAPQ30_peak_6906 chrX 9867666 9867666 + 2.53401 NA intron (NM_001649, intron 5 of 9) intron (NM_001649, intron 5 of 9) -67732 NM_001195081 100288814 Hs.722001 NM_001195081 LOC100288814 - uncharacterized LOC100288814 protein-coding Atac153_MAPQ30_peak_2367 chr16 5651298 5651298 + 2.53401 NA non-coding (NR_110902, exon 3 of 3) non-coding (NR_110902, exon 3 of 3) 14953 NR_110902 101926950 Hs.613285 NR_110902 ENSG00000260338 LOC101926950 - uncharacterized LOC101926950 ncRNA Atac153_MAPQ30_peak_5587 chr6 8402926 8402926 + 2.53401 NA Intergenic MER21B|LTR|ERVL 32874 NM_001142541 51000 Hs.285847 NM_015948 HPRD:11577 SLC35B3 C6orf196|PAPST2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 protein-coding Atac153_MAPQ30_peak_3593 chr2 82873778 82873778 + 2.53401 NA Intergenic THE1C|LTR|ERVL-MaLR -210149 NR_033423 1720 Hs.169235 NR_033423 ENSG00000168129 LOC1720 - dihydrofolate reductase pseudogene pseudo Atac153_MAPQ30_peak_1304 chr11 105205432 105205432 + 2.53401 NA Intergenic L1PA11|LINE|L1 -194971 NM_021571 59082 Hs.56279 NM_021571 HPRD:16099 CARD18 ICEBERG|UNQ5804|pseudo-ICE caspase recruitment domain family, member 18 protein-coding Atac153_MAPQ30_peak_1544 chr12 57795148 57795148 + 2.53401 NA Intergenic MLT1H|LTR|ERVL-MaLR -33320 NM_005538 3626 Hs.632722 NM_005538 HPRD:03136 INHBC IHBC inhibin, beta C protein-coding Atac153_MAPQ30_peak_5591 chr6 10747153 10747153 + 2.53401 NA promoter-TSS (NM_001127711) promoter-TSS (NM_001127711) -839 NM_001127711 81853 Hs.95600 NM_030969 HPRD:15523 TMEM14B - transmembrane protein 14B protein-coding Atac153_MAPQ30_peak_3022 chr18 13495760 13495760 + 2.53401 NA intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) 35814 NR_049822 100847080 NR_049822 MIR5190 - microRNA 5190 ncRNA Atac153_MAPQ30_peak_2733 chr17 17770294 17770294 + 2.53401 NA intron (NM_001033551, intron 7 of 13) intron (NM_001033551, intron 7 of 13) -29969 NM_004176 6720 Hs.592123 NM_004176 HPRD:01701 SREBF1 SREBP-1c|SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding Atac153_MAPQ30_peak_4309 chr21 44377831 44377831 + 2.53401 NA Intergenic MER4A|LTR|ERV1 -16789 NM_001286258 5316 Hs.431043 NM_004571 HPRD:03653 PKNOX1 PREP1|pkonx1c PBX/knotted 1 homeobox 1 protein-coding Atac153_MAPQ30_peak_267 chr1 54606050 54606050 + 2.53401 NA intron (NM_201546, intron 3 of 3) intron (NM_201546, intron 3 of 3) 12629 NM_201546 200008 Hs.568555 NM_201546 CDCP2 - CUB domain containing protein 2 protein-coding Atac153_MAPQ30_peak_6560 chr8 144302349 144302349 + 2.53401 NA Intergenic Intergenic 7281 NM_178172 338328 Hs.426410 NM_178172 HPRD:17347 GPIHBP1 GPI-HBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding Atac153_MAPQ30_peak_6505 chr8 135348949 135348949 + 2.53401 NA Intergenic Intergenic -261365 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6847 chr9 137635761 137635761 + 2.53401 NA intron (NM_001278074, intron 11 of 65) intron (NM_001278074, intron 11 of 65) 102110 NM_000093 1289 Hs.210283 NM_000093 HPRD:00368 COL5A1 - collagen, type V, alpha 1 protein-coding Atac153_MAPQ30_peak_5419 chr5 138288187 138288187 + 2.53401 NA intron (NM_022464, intron 7 of 9) L2b|LINE|L2 -77130 NM_015564 26045 Hs.656653 NM_015564 HPRD:17454 LRRTM2 - leucine rich repeat transmembrane neuronal 2 protein-coding Atac153_MAPQ30_peak_4487 chr22 46817701 46817701 + 2.53401 NA intron (NM_014246, intron 5 of 34) intron (NM_014246, intron 5 of 34) 86403 NM_001282783 55687 Hs.439524 NM_018006 HPRD:15571 TRMU MTO2|MTU1|TRMT|TRMT1|TRNT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding Atac153_MAPQ30_peak_14 chr1 2816911 2816911 + 2.53401 NA Intergenic Intergenic -110681 NM_001242672 100287898 Hs.632363 NM_001242672 ENSG00000215912 TTC34 - tetratricopeptide repeat domain 34 protein-coding Atac153_MAPQ30_peak_5370 chr5 108580605 108580605 + 2.53401 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 165070 NM_014819 9867 Hs.483036 NM_014819 HPRD:11436 PJA2 Neurodap1|RNF131 praja ring finger 2, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_1505 chr12 48143563 48143563 + 2.53401 NA exon (NM_006105, exon 9 of 28) exon (NM_006105, exon 9 of 28) 8618 NM_001098532 10411 Hs.8578 NM_006105 HPRD:06928 RAPGEF3 CAMP-GEFI|EPAC|EPAC1|HSU79275|bcm910 Rap guanine nucleotide exchange factor (GEF) 3 protein-coding Atac153_MAPQ30_peak_2319 chr15 92639346 92639346 + 2.53401 NA intron (NM_013272, intron 3 of 9) MLT1F2|LTR|ERVL-MaLR 242408 NM_013272 28232 Hs.311187 NM_013272 HPRD:07502 SLCO3A1 OATP-D|OATP3A1|OATPD|SLC21A11 solute carrier organic anion transporter family, member 3A1 protein-coding Atac153_MAPQ30_peak_2512 chr16 54994381 54994381 + 2.53401 NA Intergenic Intergenic 29270 NM_001252197 10265 Hs.435730 NM_005853 HPRD:08395 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding Atac153_MAPQ30_peak_4865 chr3 138078118 138078118 + 2.53401 NA intron (NM_001252090, intron 1 of 5) intron (NM_001252090, intron 1 of 5) 10148 NM_001252090 22808 Hs.527021 NM_012219 HPRD:06662 MRAS M-RAs|R-RAS3|RRAS3 muscle RAS oncogene homolog protein-coding Atac153_MAPQ30_peak_1980 chr14 73290276 73290276 + 2.53401 NA intron (NM_001280542, intron 1 of 10) intron (NM_001280542, intron 1 of 10) 69081 NM_001280544 8110 Hs.162868 NM_012074 HPRD:03395 DPF3 BAF45C|CERD4 D4, zinc and double PHD fingers, family 3 protein-coding Atac153_MAPQ30_peak_3071 chr18 43878026 43878026 + 2.53401 NA Intergenic Intergenic -36161 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|RNF111L2 ring finger protein 165 protein-coding Atac153_MAPQ30_peak_7145 chrX 105667402 105667402 + 2.53401 NA Intergenic Intergenic -187758 NM_018015 55086 Hs.274267 NM_018015 HPRD:06513 CXorf57 - chromosome X open reading frame 57 protein-coding Atac153_MAPQ30_peak_1741 chr12 132444504 132444504 + 2.53401 NA intron (NM_015409, intron 1 of 52) intron (NM_015409, intron 1 of 52) 10039 NM_015409 57634 Hs.723478 NM_015409 HPRD:09378 EP400 CAGH32|P400|TNRC12 E1A binding protein p400 protein-coding Atac153_MAPQ30_peak_1653 chr12 114219329 114219329 + 2.53401 NA Intergenic MER117|DNA|hAT-Charlie -7841 NR_110025 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 - long intergenic non-protein coding RNA 1234 ncRNA Atac153_MAPQ30_peak_5000 chr4 7203434 7203434 + 2.53401 NA intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 9060 NM_020777 57537 Hs.479099 NM_020777 HPRD:12099 SORCS2 - sortilin-related VPS10 domain containing receptor 2 protein-coding Atac153_MAPQ30_peak_4699 chr3 52360973 52360973 + 2.53401 NA intron (NM_015512, intron 5 of 77) intron (NM_015512, intron 5 of 77) 10638 NM_015512 25981 Hs.655469 NM_015512 HPRD:11790 DNAH1 DNAHC1|HDHC7|HL-11|HL11|HSRF-1|XLHSRF-1 dynein, axonemal, heavy chain 1 protein-coding Atac153_MAPQ30_peak_6317 chr8 23179908 23179908 + 2.53401 NA intron (NM_002318, intron 6 of 13) intron (NM_002318, intron 6 of 13) -13813 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA Atac153_MAPQ30_peak_6075 chr7 95418430 95418430 + 2.53401 NA intron (NM_001278421, intron 1 of 15) intron (NM_001278421, intron 1 of 15) 16612 NM_001135556 1780 Hs.440364 NM_004411 HPRD:04798 DYNC1I1 DNCI1|DNCIC1 dynein, cytoplasmic 1, intermediate chain 1 protein-coding Atac153_MAPQ30_peak_1914 chr14 45515959 45515959 + 2.53401 NA intron (NM_015091, intron 13 of 18) CR1_Mam|LINE|CR1 -37343 NM_017922 55015 Hs.274337 NM_017922 HPRD:17913 PRPF39 - pre-mRNA processing factor 39 protein-coding Atac153_MAPQ30_peak_5218 chr5 2275254 2275254 + 2.53401 NA Intergenic Intergenic 37061 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA Atac153_MAPQ30_peak_2075 chr14 101996191 101996191 + 2.53401 NA Intergenic Intergenic 25822 NR_002770 64150 Hs.525597 NR_002770 DIO3OS C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041 DIO3 opposite strand/antisense RNA (head to head) ncRNA Atac153_MAPQ30_peak_3780 chr2 160054518 160054518 + 2.53401 NA intron (NM_001145909, intron 18 of 26) MLT1D|LTR|ERVL-MaLR 11172 NR_106948 102465535 NR_106948 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA Atac153_MAPQ30_peak_5832 chr6 160912895 160912895 + 2.53401 NA intron (NR_028092, intron 3 of 9) intron (NR_028092, intron 3 of 9) 19261 NR_028092 80350 Hs.654503 NM_024492 HPRD:17441 LPAL2 APOA2|APOAL|APOARGC lipoprotein, Lp(a)-like 2, pseudogene pseudo Atac153_MAPQ30_peak_6293 chr8 18699019 18699019 + 2.53401 NA intron (NM_015310, intron 4 of 15) intron (NM_015310, intron 4 of 15) -32614 NM_206909 23362 Hs.434255 NM_015310 HPRD:11462 PSD3 EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding Atac153_MAPQ30_peak_6681 chr9 91402688 91402688 + 2.53401 NA Intergenic L2a|LINE|L2 -41868 NR_036252 100423015 NR_036252 miRBase:MI0015898 MIR4289 - microRNA 4289 ncRNA Atac153_MAPQ30_peak_585 chr1 231436591 231436591 + 2.53401 NA Intergenic Intergenic 36987 NM_175876 149371 Hs.356198 NM_175876 HPRD:09943 EXOC8 EXO84|Exo84p|SEC84 exocyst complex component 8 protein-coding Atac153_MAPQ30_peak_5379 chr5 114794395 114794395 + 2.53401 NA Intergenic MLT1K|LTR|ERVL-MaLR 86196 NM_020177 56929 Hs.47367 NM_020177 HPRD:16384 FEM1C EUROIMAGE686608|EUROIMAGE783647|FEM1A fem-1 homolog c (C. elegans) protein-coding Atac153_MAPQ30_peak_2955 chr17 77337761 77337761 + 2.53401 NA intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 174469 NM_001082575 146713 Hs.135229 NM_001025448 HPRD:18730 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding protein, fox-1 homolog (C. elegans) 3 protein-coding Atac153_MAPQ30_peak_6001 chr7 50491485 50491485 + 2.53401 NA Intergenic Intergenic 26603 NM_001287496 63979 Hs.137516 NM_022116 HPRD:10958 FIGNL1 - fidgetin-like 1 protein-coding Atac153_MAPQ30_peak_3764 chr2 140438596 140438596 + 2.53401 NA Intergenic MER50B|LTR|ERV1 783702 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo Atac153_MAPQ30_peak_2218 chr15 68990727 68990727 + 2.53401 NA intron (NM_006091, intron 3 of 11) intron (NM_006091, intron 3 of 11) 66400 NM_001190457 10391 Hs.551213 NM_006091 HPRD:05416 CORO2B CLIPINC coronin, actin binding protein, 2B protein-coding Atac153_MAPQ30_peak_6880 chrX 1022632 1022632 + 2.53401 NA Intergenic MLT1C|LTR|ERVL-MaLR 308984 NM_022148 64109 Hs.287729 NM_022148 HPRD:02288 CRLF2 CRL2|CRLF2Y|TSLPR cytokine receptor-like factor 2 protein-coding Atac153_MAPQ30_peak_7117 chrX 82487099 82487099 + 2.53401 NA Intergenic L1PA15|LINE|L1 -276170 NM_000307 5456 Hs.2229 NM_000307 HPRD:02076 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding Atac153_MAPQ30_peak_3816 chr2 191522173 191522173 + 2.53401 NA intron (NM_005966, intron 3 of 9) intron (NM_005966, intron 3 of 9) 8325 NM_005966 4664 Hs.107474 NM_005966 HPRD:02881 NAB1 - NGFI-A binding protein 1 (EGR1 binding protein 1) protein-coding Atac153_MAPQ30_peak_2106 chr15 27133904 27133904 + 2.53401 NA intron (NM_000810, intron 6 of 10) intron (NM_000810, intron 6 of 10) 21631 NM_001165037 2558 Hs.24969 NM_000810 HPRD:08840 GABRA5 - gamma-aminobutyric acid (GABA) A receptor, alpha 5 protein-coding Atac153_MAPQ30_peak_1686 chr12 123489695 123489695 + 2.53401 NA intron (NM_001300801, intron 6 of 24) intron (NM_001300801, intron 6 of 24) 5580 NR_036187 100422931 NR_036187 MIR4304 - microRNA 4304 ncRNA Atac153_MAPQ30_peak_110 chr1 18331356 18331356 + 2.53401 NA Intergenic LTR67B|LTR|ERVL -102884 NM_032880 84966 Hs.212511 NM_032880 HPRD:11309 IGSF21 - immunoglobin superfamily, member 21 protein-coding Atac153_MAPQ30_peak_807 chr10 77710505 77710505 + 2.53401 NA intron (NM_032024, intron 1 of 5) L2c|LINE|L2 167986 NM_032024 83938 Hs.118161 NM_032024 HPRD:12560 C10orf11 OCA5|OCA7 chromosome 10 open reading frame 11 protein-coding Atac153_MAPQ30_peak_385 chr1 154802652 154802652 + 2.53401 NA intron (NM_002249, intron 1 of 7) intron (NM_002249, intron 1 of 7) 29686 NM_170782 3782 Hs.490765 NM_002249 HPRD:04283 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 protein-coding Atac153_MAPQ30_peak_5238 chr5 6347619 6347619 + 2.53401 NA Intergenic Intergenic -10214 NR_028351 401172 Hs.376760 NM_001001702 HPRD:16934 FLJ33360 - FLJ33360 protein ncRNA Atac153_MAPQ30_peak_4627 chr3 37757007 37757007 + 2.53401 NA intron (NM_002207, intron 18 of 27) intron (NM_002207, intron 18 of 27) 146264 NR_110532 101928153 Hs.657314 NR_110531 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3858 chr2 217140048 217140048 + 2.53401 NA intron (NM_020814, intron 3 of 3) intron (NM_020814, intron 3 of 3) 58436 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 PKI55 - DKFZp434H1419 ncRNA Atac153_MAPQ30_peak_1126 chr11 24378271 24378271 + 2.53401 NA Intergenic L1PBa|LINE|L1 -140245 NM_001009909 338645 Hs.144138 NM_001009909 HPRD:17348 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding Atac153_MAPQ30_peak_2259 chr15 76680574 76680574 + 2.53401 NA intron (NM_001145923, intron 27 of 31) L3|LINE|CR1 51427 NM_145805 64843 Hs.444677 NM_145805 HPRD:11053 ISL2 - ISL LIM homeobox 2 protein-coding Atac153_MAPQ30_peak_7112 chrX 80733751 80733751 + 2.53401 NA Intergenic L1PBa|LINE|L1 -276310 NM_030763 79366 Hs.282204 NM_030763 HPRD:02310 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding Atac153_MAPQ30_peak_7059 chrX 63007749 63007749 + 2.53401 NA Intergenic LTR33A|LTR|ERVL -1782 NR_031567 100302115 NR_031567 miRBase:MI0003782 MIR1468 MIRN1468|hsa-mir-1468 microRNA 1468 ncRNA Atac153_MAPQ30_peak_6498 chr8 134184081 134184081 + 2.53401 NA Intergenic Intergenic -19201 NM_003882 8840 Hs.492974 NM_003882 WISP1 CCN4|WISP1c|WISP1i|WISP1tc WNT1 inducible signaling pathway protein 1 protein-coding Atac153_MAPQ30_peak_3930 chr2 238285274 238285274 + 2.53401 NA intron (NM_057167, intron 6 of 42) intron (NM_057167, intron 6 of 42) 37576 NM_057167 1293 Hs.233240 NM_004369 HPRD:00371 COL6A3 - collagen, type VI, alpha 3 protein-coding Atac153_MAPQ30_peak_2060 chr14 100068730 100068730 + 2.53401 NA intron (NM_001144995, intron 1 of 5) MIRb|SINE|MIR 1997 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding Atac153_MAPQ30_peak_1649 chr12 113615760 113615760 + 2.53401 NA intron (NM_024072, intron 5 of 19) intron (NM_024072, intron 5 of 19) 7524 NM_001111322 79039 Hs.506861 NM_024072 HPRD:13129 DDX54 DP97 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 protein-coding Atac153_MAPQ30_peak_5807 chr6 148553185 148553185 + 2.53401 NA Intergenic MIRb|SINE|MIR -110544 NM_015278 23328 Hs.193133 NM_015278 HPRD:06408 SASH1 SH3D6A|dJ323M4|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding Atac153_MAPQ30_peak_896 chr10 106393301 106393301 + 2.53401 NA Intergenic Intergenic -7558 NM_014978 22986 Hs.671950 NM_014978 HPRD:12100 SORCS3 SORCS sortilin-related VPS10 domain containing receptor 3 protein-coding Atac153_MAPQ30_peak_724 chr10 43557444 43557444 + 2.53401 NA Intergenic Intergenic -15073 NM_020630 5979 Hs.350321 NM_000323 HPRD:01266 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1|RET51 ret proto-oncogene protein-coding Atac153_MAPQ30_peak_1396 chr11 131108728 131108728 + 2.53401 NA Intergenic Intergenic -131643 NM_001048209 50863 Hs.504352 NM_016522 HPRD:06398 NTM HNT|IGLON2|NTRI neurotrimin protein-coding Atac153_MAPQ30_peak_4046 chr20 24703660 24703660 + 2.53401 NA Intergenic Intergenic -226206 NM_003650 8530 Hs.143212 NM_003650 HPRD:04458 CST7 CMAP cystatin F (leukocystatin) protein-coding Atac153_MAPQ30_peak_4692 chr3 51726071 51726071 + 2.53401 NA intron (NM_001243725, intron 3 of 4) intron (NM_001243725, intron 3 of 4) -15010 NM_001130063 2912 Hs.121510 NM_000839 HPRD:04977 GRM2 GLUR2|GPRC1B|MGLUR2|mGlu2 glutamate receptor, metabotropic 2 protein-coding Atac153_MAPQ30_peak_1377 chr11 126569124 126569124 + 2.53401 NA intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) 43143 NR_120533 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA Atac153_MAPQ30_peak_3186 chr19 2566496 2566496 + 2.53401 NA intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) 90373 NM_015675 4616 Hs.110571 NM_015675 HPRD:05382 GADD45B GADD45BETA|MYD118 growth arrest and DNA-damage-inducible, beta protein-coding Atac153_MAPQ30_peak_117 chr1 19797779 19797779 + 2.53401 NA intron (NM_001206541, intron 1 of 8) intron (NM_001206541, intron 1 of 8) 13422 NM_001282162 832 Hs.432760 NM_004930 HPRD:11872 CAPZB CAPB|CAPPB|CAPZ capping protein (actin filament) muscle Z-line, beta protein-coding Atac153_MAPQ30_peak_4372 chr22 27324123 27324123 + 2.53401 NA Intergenic Intergenic 24868 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000223704 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA Atac153_MAPQ30_peak_5444 chr5 149449666 149449666 + 2.53401 NA intron (NM_001288705, intron 8 of 20) intron (NM_001288705, intron 8 of 20) 16537 NM_001288705 1436 Hs.586219 NM_005211 HPRD:01269 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding Atac153_MAPQ30_peak_4567 chr3 12549822 12549822 + 2.53401 NA intron (NM_001145394, intron 7 of 12) intron (NM_001145394, intron 7 of 12) 23812 NM_001145392 80746 Hs.335550 NM_025265 HPRD:10576 TSEN2 PCH2B|SEN2|SEN2L TSEN2 tRNA splicing endonuclease subunit protein-coding Atac153_MAPQ30_peak_2770 chr17 21316851 21316851 + 2.53401 NA intron (NM_021012, intron 2 of 2) intron (NM_021012, intron 2 of 2) 8403 NM_001194958 100134444 Hs.200629 NM_001194958 KCNJ18 KIR2.6|TTPP2 potassium inwardly-rectifying channel, subfamily J, member 18 protein-coding Atac153_MAPQ30_peak_1084 chr11 10926013 10926013 + 2.53401 NA Intergenic Intergenic 46249 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_751 chr10 49719076 49719076 + 2.53401 NA intron (NR_045675, intron 4 of 10) intron (NR_045675, intron 4 of 10) -17384 NM_001256026 58504 Hs.655672 NM_021226 HPRD:12476 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding Atac153_MAPQ30_peak_2142 chr15 42184110 42184110 + 2.53401 NA intron (NM_016642, intron 3 of 67) intron (NM_016642, intron 3 of 67) 2165 NM_016642 51332 Hs.709819 NM_016642 HPRD:10438 SPTBN5 BSPECV|HUBSPECV|HUSPECV spectrin, beta, non-erythrocytic 5 protein-coding Atac153_MAPQ30_peak_7119 chrX 83631777 83631777 + 2.53401 NA intron (NM_144657, intron 4 of 9) L1MA1|LINE|L1 125710 NM_001177479 139324 Hs.559546 NM_144657 HPRD:06550 HDX CXorf43|D030011N01Rik highly divergent homeobox protein-coding Atac153_MAPQ30_peak_4867 chr3 138131855 138131855 + 2.53401 NA Intergenic Tigger15a|DNA|TcMar-Tigger -21560 NM_031913 83850 Hs.477711 NM_031913 HPRD:13054 ESYT3 CHR3SYT|E-Syt3|FAM62C extended synaptotagmin-like protein 3 protein-coding Atac153_MAPQ30_peak_3942 chr2 239562144 239562144 + 2.53401 NA Intergenic MLT1D|LTR|ERVL-MaLR -98004 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA Atac153_MAPQ30_peak_3129 chr18 60355936 60355936 + 2.53401 NA Intergenic L2a|LINE|L2 -26736 NM_194449 23239 Hs.465337 NM_194449 HPRD:15145 PHLPP1 PHLPP|PLEKHE1|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding Atac153_MAPQ30_peak_3356 chr19 56389799 56389799 + 2.53401 NA intron (NM_134444, intron 8 of 9) intron (NM_134444, intron 8 of 9) -41671 NM_145007 204801 Hs.375039 NM_145007 HPRD:10110 NLRP11 CLR19.6|NALP11|NOD17|PAN10|PYPAF6|PYPAF7 NLR family, pyrin domain containing 11 protein-coding Atac153_MAPQ30_peak_4177 chr20 55598865 55598865 + 2.53401 NA Intergenic MLT1C|LTR|ERVL-MaLR -189887 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1833 chr13 80318574 80318574 + 2.53401 NA Intergenic Intergenic -59947 NR_125785 102724076 Hs.208617 NR_125785 LINC01038 - long intergenic non-protein coding RNA 1038 ncRNA Atac153_MAPQ30_peak_3717 chr2 128466302 128466302 + 2.53401 NA exon (NM_018383, exon 21 of 22) exon (NM_018383, exon 21 of 22) 7705 NM_032740 84826 Hs.345849 NM_032740 HPRD:14683 SFT2D3 - SFT2 domain containing 3 protein-coding Atac153_MAPQ30_peak_2575 chr16 75330046 75330046 + 2.53401 NA intron (NM_006324, intron 6 of 6) intron (NM_006324, intron 6 of 6) -28095 NM_001170715 9564 Hs.479747 NM_014567 HPRD:04248 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas breast cancer anti-estrogen resistance 1 protein-coding Atac153_MAPQ30_peak_241 chr1 45202138 45202138 + 2.53401 NA Intergenic MSTD|LTR|ERVL-MaLR -3352 NM_006845 11004 Hs.720061 NM_006845 HPRD:05172 KIF2C CT139|KNSL6|MCAK kinesin family member 2C protein-coding Atac153_MAPQ30_peak_2225 chr15 70490034 70490034 + 2.53401 NA Intergenic Intergenic -99778 NM_001105192 7090 Hs.287362 NM_005078 HPRD:02558 TLE3 ESG|ESG3|GRG3|HsT18976 transducin-like enhancer of split 3 protein-coding Atac153_MAPQ30_peak_3958 chr2 241239067 241239067 + 2.53401 NA Intergenic Intergenic -136048 NM_002081 2817 Hs.328232 NM_002081 HPRD:02671 GPC1 glypican glypican 1 protein-coding Atac153_MAPQ30_peak_5883 chr7 1196435 1196435 + 2.53401 NA intron (NM_182491, intron 3 of 4) intron (NM_182491, intron 3 of 4) 3420 NM_182491 90637 Hs.648111 NM_182491 HPRD:14277 ZFAND2A AIRAP zinc finger, AN1-type domain 2A protein-coding Atac153_MAPQ30_peak_6772 chr9 117272857 117272857 + 2.53401 NA Intergenic Intergenic -5121 NM_015404 25861 Hs.93836 NM_015404 HPRD:09718 DFNB31 CIP98|PDZD7B|USH2D|WHRN|WI deafness, autosomal recessive 31 protein-coding Atac153_MAPQ30_peak_2156 chr15 49263692 49263692 + 2.53401 NA Intergenic L1PB4|LINE|L1 -8051 NM_203349 399694 Hs.642615 NM_203349 HPRD:15289 SHC4 RaLP|SHCD SHC (Src homology 2 domain containing) family, member 4 protein-coding Atac153_MAPQ30_peak_7044 chrX 55032111 55032111 + 2.53401 NA intron (NM_014481, intron 5 of 5) L2c|LINE|L2 5355 NM_001271748 27301 Hs.659558 NM_014481 APEX2 APE2|APEXL2|XTH2|ZGRF2 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 protein-coding Atac153_MAPQ30_peak_2232 chr15 72049454 72049454 + 2.53401 NA intron (NM_001286429, intron 8 of 11) MIRb|SINE|MIR -53434 NM_014249 10002 Hs.187354 NM_014249 NR2E3 ESCS|PNR|RNR|RP37|rd7 nuclear receptor subfamily 2, group E, member 3 protein-coding Atac153_MAPQ30_peak_2873 chr17 55722448 55722448 + 2.53401 NA intron (NM_138962, intron 10 of 13) intron (NM_138962, intron 10 of 13) -36675 NR_110807 101927539 Hs.680439 NR_110807 ENSG00000263499 LOC101927539 - uncharacterized LOC101927539 ncRNA Atac153_MAPQ30_peak_1772 chr13 26296089 26296089 + 2.53401 NA intron (NM_016529, intron 25 of 36) L1MB7|LINE|L1 329109 NM_001007538 387914 Hs.433791 NM_001007538 HPRD:16589 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding Atac153_MAPQ30_peak_6005 chr7 50878315 50878315 + 2.53401 NA Intergenic Intergenic -17156 NM_001001555 2887 Hs.164060 NM_005311 HPRD:03312 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor-bound protein 10 protein-coding Atac153_MAPQ30_peak_4400 chr22 31435250 31435250 + 2.53401 NA Intergenic Intergenic -42032 NM_006932 6525 Hs.149098 NM_006932 HPRD:03675 SMTN - smoothelin protein-coding Atac153_MAPQ30_peak_5834 chr6 161605094 161605094 + 2.53401 NA intron (NM_020133, intron 2 of 8) L2|LINE|L2 -22080 NR_024277 79992 Hs.664873 NM_024929 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_233 chr1 44376640 44376640 + 2.53401 NA intron (NM_174966, intron 9 of 9) MER115|DNA|hAT-Tip100 -22352 NM_001136215 9048 Hs.632404 NM_003976 HPRD:04863 ARTN ENOVIN|EVN|NBN artemin protein-coding Atac153_MAPQ30_peak_179 chr1 33921786 33921786 + 2.53401 NA Intergenic MLT1G3|LTR|ERVL-MaLR -16446 NM_145238 7579 Hs.442705 NM_145238 HPRD:15769 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding Atac153_MAPQ30_peak_1607 chr12 105112505 105112505 + 2.53401 NA intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 127094 NR_037487 100500843 NR_037487 MIR3922 - microRNA 3922 ncRNA Atac153_MAPQ30_peak_4190 chr20 58304315 58304315 + 2.53401 NA intron (NM_183246, intron 1 of 11) intron (NM_183246, intron 1 of 11) 8050 NM_183244 116154 Hs.473218 NM_080672 HPRD:10571 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding Atac153_MAPQ30_peak_6833 chr9 135419390 135419390 + 2.53401 NA intron (NM_001282957, intron 5 of 5) intron (NM_001282957, intron 5 of 5) -38603 NM_020064 56751 Hs.283809 NM_020064 HPRD:05554 BARHL1 - BarH-like homeobox 1 protein-coding Atac153_MAPQ30_peak_4616 chr3 34193811 34193811 + 2.53401 NA Intergenic MLT1J2|LTR|ERVL-MaLR 353748 NM_001162429 10015 Hs.475896 NM_013374 HPRD:06425 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding Atac153_MAPQ30_peak_6925 chrX 17819071 17819071 + 2.53401 NA exon (NM_021785, exon 2 of 2) exon (NM_021785, exon 2 of 2) 59876 NR_033348 10742 Hs.446680 NM_021785 HPRD:02199 RAI2 - retinoic acid induced 2 protein-coding Atac153_MAPQ30_peak_3036 chr18 24839218 24839218 + 2.53401 NA Intergenic L1PREC2|LINE|L1 -73916 NM_031422 83539 Hs.44584 NM_031422 ENSG00000154080 CHST9 GALNAC4ST-2 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 protein-coding Atac153_MAPQ30_peak_4342 chr22 21988112 21988112 + 2.53401 NA intron (NM_152612, intron 2 of 4) MIRb|SINE|MIR 1026 NM_152612 164592 Hs.131615 NM_152612 HPRD:08203 CCDC116 - coiled-coil domain containing 116 protein-coding Atac153_MAPQ30_peak_27 chr1 4795298 4795298 + 2.53401 NA intron (NM_001042478, intron 2 of 5) intron (NM_001042478, intron 2 of 5) 80193 NM_018836 55966 Hs.25924 NM_018836 HPRD:15339 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding Atac153_MAPQ30_peak_630 chr10 431234 431234 + 2.53401 NA intron (NM_014974, intron 14 of 36) intron (NM_014974, intron 14 of 36) 205300 NM_001202468 10771 Hs.292265 NM_006624 HPRD:09830 ZMYND11 BRAM1|BS69 zinc finger, MYND-type containing 11 protein-coding Atac153_MAPQ30_peak_683 chr10 19398649 19398649 + 2.53401 NA intron (NM_001142308, intron 5 of 39) L1MA6|LINE|L1 60949 NM_001142308 340895 Hs.646734 NM_001142308 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding Atac153_MAPQ30_peak_1869 chr13 111177109 111177109 + 2.53401 NA intron (NM_017817, intron 1 of 1) intron (NM_017817, intron 1 of 1) -16583 NR_046583 100874203 Hs.508716 NR_046583 ENSG00000232814 COL4A2-AS1 - COL4A2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1491 chr12 33415650 33415650 + 2.53401 NA Intergenic Intergenic 177104 NM_198992 341359 Hs.118703 NM_198992 SYT10 - synaptotagmin X protein-coding Atac153_MAPQ30_peak_2752 chr17 20898761 20898761 + 2.53401 NA Intergenic Intergenic 47591 NM_015276 23326 Hs.462492 NM_015276 ENSG00000124422 USP22 USP3L ubiquitin specific peptidase 22 protein-coding Atac153_MAPQ30_peak_628 chr1 248015516 248015516 + 2.53401 NA Intergenic Intergenic -4985 NM_015431 25893 Hs.269151 NM_015431 TRIM58 BIA2 tripartite motif containing 58 protein-coding Atac153_MAPQ30_peak_93 chr1 16331589 16331589 + 2.53401 NA intron (NM_178840, intron 1 of 1) intron (NM_178840, intron 1 of 1) 858 NM_178840 149563 Hs.29190 NM_178840 C1orf64 ERRF chromosome 1 open reading frame 64 protein-coding Atac153_MAPQ30_peak_5417 chr5 137872624 137872624 + 2.53401 NA intron (NM_001291975, intron 2 of 11) intron (NM_001291975, intron 2 of 11) 4776 NM_001282185 2107 Hs.483494 NM_004730 HPRD:02616 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding Atac153_MAPQ30_peak_7097 chrX 71345826 71345826 + 2.53401 NA intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) 5925 NM_001024455 340526 Hs.512180 NM_001024455 HPRD:18594 RGAG4 6430402L03Rik|MAR5|MART5 retrotransposon gag domain containing 4 protein-coding Atac153_MAPQ30_peak_3090 chr18 46220374 46220374 + 2.53401 NA intron (NM_014772, intron 6 of 11) intron (NM_014772, intron 6 of 11) 23403 NR_039897 100616366 NR_039897 MIR4743 - microRNA 4743 ncRNA Atac153_MAPQ30_peak_1680 chr12 121630228 121630228 + 2.53401 NA Intergenic Intergenic -17436 NR_046372 5025 Hs.321709 NM_002560 HPRD:09017 P2RX4 P2X4|P2X4R purinergic receptor P2X, ligand-gated ion channel, 4 protein-coding Atac153_MAPQ30_peak_5625 chr6 29468333 29468333 + 2.53401 NA Intergenic Intergenic -12654 NM_052967 116511 Hs.533297 NM_052967 HPRD:06251 MAS1L MAS-L|MRG|dJ994E9.2 MAS1 proto-oncogene like, G protein-coupled receptor protein-coding Atac153_MAPQ30_peak_2682 chr17 6605109 6605109 + 2.53401 NA intron (NM_001284509, intron 5 of 11) intron (NM_001284509, intron 5 of 11) 11631 NM_001284509 284111 Hs.399496 NM_177550 HPRD:10512 SLC13A5 EIEE25|NACT|mIndy solute carrier family 13 (sodium-dependent citrate transporter), member 5 protein-coding Atac153_MAPQ30_peak_970 chr10 127296647 127296647 + 2.53401 NA Intergenic L2b|LINE|L2 33707 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1679 chr12 121471085 121471085 + 2.53401 NA intron (NM_001261825, intron 2 of 3) intron (NM_001261825, intron 2 of 3) 5960 NM_001261825 8638 Hs.118633 NM_003733 HPRD:04473 OASL OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase-like protein-coding Atac153_MAPQ30_peak_3221 chr19 11665090 11665090 + 2.53401 NA exon (NM_032377, exon 2 of 4) exon (NM_032377, exon 2 of 4) 4961 NM_032377 84337 Hs.631633 NM_032377 HPRD:14639 ELOF1 ELF1 elongation factor 1 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_4066 chr20 31790448 31790448 + 2.53401 NA non-coding (NR_026760, exon 5 of 9) non-coding (NR_026760, exon 5 of 9) 9037 NR_026760 317716 Hs.434194 NM_173859 HPRD:06359 BPIFA4P BASE BPI fold containing family A, member 4, pseudogene pseudo Atac153_MAPQ30_peak_2567 chr16 73597941 73597941 + 2.53401 NA Intergenic Intergenic 177237 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LOC100506172 - uncharacterized LOC100506172 ncRNA Atac153_MAPQ30_peak_1556 chr12 65325483 65325483 + 2.53401 NA intron (NR_033988, intron 2 of 2) L1PBa|LINE|L1 47929 NR_033988 400046 Hs.591032 NR_033988 ENSG00000255693 FLJ41278 - uncharacterized LOC400046 ncRNA Atac153_MAPQ30_peak_6873 chr9 140862014 140862014 + 2.53401 NA intron (NM_000718, intron 10 of 45) intron (NM_000718, intron 10 of 45) -74992 NR_121583 100133077 Hs.640081 NR_121583 ENSG00000203987 LOC100133077 - uncharacterized LOC100133077 ncRNA Atac153_MAPQ30_peak_6180 chr7 143016131 143016131 + 2.53401 NA intron (NM_000083, intron 1 of 22) intron (NM_000083, intron 1 of 22) 2912 NR_046453 1180 Hs.121483 NM_000083 HPRD:00320 CLCN1 CLC1 chloride channel, voltage-sensitive 1 protein-coding Atac153_MAPQ30_peak_2056 chr14 99384269 99384269 + 2.53401 NA Intergenic Intergenic 206319 NM_182560 283598 Hs.448754 NM_182560 HPRD:08075 C14orf177 - chromosome 14 open reading frame 177 protein-coding Atac153_MAPQ30_peak_5272 chr5 14359398 14359398 + 2.53401 NA intron (NM_007118, intron 12 of 56) intron (NM_007118, intron 12 of 56) 215569 NM_007118 7204 Hs.130031 NM_007118 HPRD:03537 TRIO ARHGEF23|tgat trio Rho guanine nucleotide exchange factor protein-coding Atac153_MAPQ30_peak_3853 chr2 215757471 215757471 + 2.53401 NA intron (NR_110292, intron 2 of 3) intron (NR_110292, intron 2 of 3) 82518 NR_110292 101928103 Hs.665619 NR_110292 ENSG00000229267 LOC101928103 - uncharacterized LOC101928103 ncRNA Atac153_MAPQ30_peak_3251 chr19 21439335 21439335 + 2.53401 NA Intergenic HERV15-int|LTR|ERV1 72877 NM_021269 7562 Hs.466296 NM_021269 HPRD:18322 ZNF708 KOX8|ZNF15|ZNF15L1 zinc finger protein 708 protein-coding Atac153_MAPQ30_peak_3529 chr2 47093520 47093520 + 2.53401 NA Intergenic Intergenic 38517 NR_024452 100134259 Hs.114449 NR_024452 ENSG00000239332 LINC01119 - long intergenic non-protein coding RNA 1119 ncRNA Atac153_MAPQ30_peak_5164 chr4 152546461 152546461 + 2.53401 NA intron (NM_001109977, intron 7 of 13) intron (NM_001109977, intron 7 of 13) 135714 NM_004564 5188 Hs.119316 NM_004564 HPRD:04706 GATB PET112|PET112L glutamyl-tRNA(Gln) amidotransferase, subunit B protein-coding Atac153_MAPQ30_peak_2645 chr17 331 331 + 2.53401 NA Intergenic L1M5|LINE|L1 31090 NM_003585 8447 Hs.551705 NM_003585 DOC2B DOC2BL double C2-like domains, beta protein-coding Atac153_MAPQ30_peak_6543 chr8 142579122 142579122 + 2.53401 NA Intergenic Intergenic -61792 NR_102364 389690 Hs.689547 NM_207414 HPRD:13480 MROH5 - maestro heat-like repeat family member 5 protein-coding Atac153_MAPQ30_peak_1201 chr11 60801887 60801887 + 2.53401 NA Intergenic AluJb|SINE|Alu 62774 NM_001254750 923 Hs.744366 NM_006725 HPRD:01724 CD6 TP120 CD6 molecule protein-coding Atac153_MAPQ30_peak_2238 chr15 74109418 74109418 + 2.53401 NA Intergenic Intergenic 48863 NR_120352 101929221 NR_120352 LOC101929221 - uncharacterized LOC101929221 ncRNA Atac153_MAPQ30_peak_7218 chrX 132385389 132385389 + 2.53401 NA Intergenic Intergenic -33013 NM_016521 51270 Hs.142908 NM_016521 HPRD:06623 TFDP3 CT30|DP4|HCA661 transcription factor Dp family, member 3 protein-coding Atac153_MAPQ30_peak_6291 chr8 17931151 17931151 + 2.53401 NA intron (NM_001127505, intron 2 of 13) 7SK|RNA|RNA 10728 NM_177924 427 Hs.527412 NM_004315 HPRD:01969 ASAH1 AC|ACDase|ASAH|PHP|PHP32|SMAPME N-acylsphingosine amidohydrolase (acid ceramidase) 1 protein-coding Atac153_MAPQ30_peak_3130 chr18 60952605 60952605 + 2.53401 NA intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 34008 NM_000633 596 Hs.150749 NM_000633 HPRD:01045 BCL2 Bcl-2|PPP1R50 B-cell CLL/lymphoma 2 protein-coding Atac153_MAPQ30_peak_3607 chr2 91763263 91763263 + 2.53401 NA Intergenic Intergenic 84712 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_5685 chr6 42379002 42379002 + 2.53401 NA intron (NM_033502, intron 2 of 17) MIRb|SINE|MIR 40787 NM_001297573 55809 Hs.485392 NM_018415 HPRD:11647 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding Atac153_MAPQ30_peak_1996 chr14 76828573 76828573 + 2.53401 NA Intergenic MIRb|SINE|MIR -9117 NM_004452 2103 Hs.435845 NM_004452 HPRD:03700 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen-related receptor beta protein-coding Atac153_MAPQ30_peak_643 chr10 3869750 3869750 + 2.53401 NA Intergenic Intergenic -42277 NM_001160124 1316 Hs.4055 NM_001300 HPRD:03632 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel-like factor 6 protein-coding Atac153_MAPQ30_peak_6237 chr8 752505 752505 + 2.53401 NA intron (NR_073397, intron 1 of 3) intron (NR_073397, intron 1 of 3) 64900 NR_073397 619343 Hs.667939 NR_073397 ERICH1-AS1 C8orf68 ERICH1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4489 chr22 46917955 46917955 + 2.53401 NA intron (NM_014246, intron 1 of 34) L1MB3|LINE|L1 15112 NM_014246 9620 Hs.252387 NM_014246 HPRD:05160 CELSR1 CDHF9|FMI2|HFMI2|ME2 cadherin, EGF LAG seven-pass G-type receptor 1 protein-coding Atac153_MAPQ30_peak_7002 chrX 40871147 40871147 + 2.53401 NA Intergenic Intergenic -73741 NM_001039590 8239 Hs.77578 NM_004652 HPRD:02091 USP9X DFFRX|FAF|FAM|MRX99 ubiquitin specific peptidase 9, X-linked protein-coding Atac153_MAPQ30_peak_3362 chr19 58865431 58865431 + 2.53401 NA promoter-TSS (NM_130786) promoter-TSS (NM_130786) -566 NM_130786 1 Hs.529161 NM_130786 HPRD:00726 A1BG A1B|ABG|GAB|HYST2477 alpha-1-B glycoprotein protein-coding Atac153_MAPQ30_peak_3151 chr18 73968045 73968045 + 2.53401 NA Intergenic Intergenic 133092 NR_040034 339298 Hs.151215 NR_040034 ENSG00000263547 LOC339298 - uncharacterized LOC339298 ncRNA Atac153_MAPQ30_peak_4964 chr4 2414499 2414499 + 2.53401 NA intron (NM_001172656, intron 1 of 11) intron (NM_001172656, intron 1 of 11) 5871 NM_001172658 57732 Hs.292056 NM_020972 HPRD:11701 ZFYVE28 LST2|LYST2 zinc finger, FYVE domain containing 28 protein-coding Atac153_MAPQ30_peak_2916 chr17 70662673 70662673 + 2.53401 NA intron (NM_139177, intron 7 of 9) intron (NM_139177, intron 7 of 9) -26062 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 - long intergenic non-protein coding RNA 511 ncRNA Atac153_MAPQ30_peak_2399 chr16 12316788 12316788 + 2.53401 NA intron (NM_032167, intron 14 of 20) MIRc|SINE|MIR 246186 NM_032167 92017 Hs.458401 NM_032167 HPRD:17437 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding Atac153_MAPQ30_peak_2676 chr17 5567276 5567276 + 2.53401 NA Intergenic MLT1D|LTR|ERVL-MaLR -79444 NM_033007 22861 Hs.652273 NM_014922 HPRD:07364 NLRP1 CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family, pyrin domain containing 1 protein-coding Atac153_MAPQ30_peak_6484 chr8 129013792 129013792 + 2.53401 NA intron (NR_003367, intron 4 of 7) intron (NR_003367, intron 4 of 7) -7352 NR_031611 100302170 NR_031611 MIR1206 MIRN1206|hsa-mir-1206 microRNA 1206 ncRNA Atac153_MAPQ30_peak_6850 chr9 137760544 137760544 + 2.53401 NA intron (NR_103451, intron 1 of 1) intron (NR_103451, intron 1 of 1) 3920 NR_103451 101448202 Hs.679677 NR_103451 LOC101448202 - uncharacterized LOC101448202 ncRNA Atac153_MAPQ30_peak_208 chr1 38586638 38586638 + 2.53401 NA Intergenic L2a|LINE|L2 31735 NR_037432 100500801 NR_037432 miRBase:MI0016060 MIR3659 - microRNA 3659 ncRNA Atac153_MAPQ30_peak_5150 chr4 133967290 133967290 + 2.53401 NA Intergenic Intergenic -103180 NM_032961 57575 Hs.192859 NM_020815 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding Atac153_MAPQ30_peak_4241 chr21 31344719 31344719 + 2.53401 NA Intergenic L1ME1|LINE|L1 -32437 NM_175611 2897 Hs.664641 NM_000830 HPRD:00693 GRIK1 EAA3|EEA3|GLR5|GLUR5|GluK1 glutamate receptor, ionotropic, kainate 1 protein-coding Atac153_MAPQ30_peak_152 chr1 26511008 26511008 + 2.53401 NA intron (NM_001297647, intron 12 of 20) intron (NM_001297647, intron 12 of 20) -6111 NM_198137 378807 Hs.123532 NM_198137 HPRD:18607 CATSPER4 - cation channel, sperm associated 4 protein-coding Atac153_MAPQ30_peak_2821 chr17 40322186 40322186 + 2.53401 NA exon (NM_012285, exon 8 of 17) exon (NM_012285, exon 8 of 17) 11110 NM_012285 23415 Hs.304081 NM_012285 HPRD:05165 KCNH4 BEC2|ELK1|Kv12.3 potassium voltage-gated channel, subfamily H (eag-related), member 4 protein-coding Atac153_MAPQ30_peak_5525 chr5 177424281 177424281 + 2.53401 NA Intergenic Intergenic -1038 NM_006261 5626 Hs.158301 NM_006261 HPRD:03325 PROP1 CPHD2|PROP-1 PROP paired-like homeobox 1 protein-coding Atac153_MAPQ30_peak_3478 chr2 28892783 28892783 + 2.53401 NA Intergenic Intergenic -81831 NM_206876 5500 Hs.702907 NM_002709 HPRD:11792 PPP1CB HEL-S-80p|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1, catalytic subunit, beta isozyme protein-coding Atac153_MAPQ30_peak_1369 chr11 125067975 125067975 + 2.53401 NA intron (NM_022062, intron 1 of 12) intron (NM_022062, intron 1 of 12) 33416 NM_022062 63876 Hs.278564 NM_022062 HPRD:17857 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding Atac153_MAPQ30_peak_1092 chr11 13353360 13353360 + 2.53401 NA intron (NM_001178, intron 3 of 19) intron (NM_001178, intron 3 of 19) 54086 NM_001297722 406 Hs.65734 NM_001178 HPRD:03973 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator-like protein-coding Atac153_MAPQ30_peak_4413 chr22 33393471 33393471 + 2.53401 NA intron (NM_001135774, intron 2 of 13) intron (NM_001135774, intron 2 of 13) 9335 NM_133633 8224 Hs.608750 NM_003490 HPRD:04083 SYN3 - synapsin III protein-coding Atac153_MAPQ30_peak_2245 chr15 74940959 74940959 + 2.53401 NA intron (NM_001142444, intron 5 of 7) intron (NM_001142444, intron 5 of 7) 33624 NM_001130028 1198 Hs.584748 NM_001292 HPRD:04290 CLK3 PHCLK3|PHCLK3/152 CDC-like kinase 3 protein-coding Atac153_MAPQ30_peak_1658 chr12 114560365 114560365 + 2.53401 NA Intergenic Intergenic -156189 NM_001146699 9904 Hs.7482 NM_016196 HPRD:15225 RBM19 - RNA binding motif protein 19 protein-coding Atac153_MAPQ30_peak_319 chr1 110701154 110701154 + 2.53401 NA intron (NM_001010898, intron 1 of 11) intron (NM_001010898, intron 1 of 11) 8022 NM_001010898 388662 Hs.128382 NM_001010898 HPRD:18061 SLC6A17 NTT4 solute carrier family 6 (neutral amino acid transporter), member 17 protein-coding Atac153_MAPQ30_peak_3479 chr2 28933927 28933927 + 2.53401 NA Intergenic Intergenic -40687 NM_206876 5500 Hs.702907 NM_002709 HPRD:11792 PPP1CB HEL-S-80p|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1, catalytic subunit, beta isozyme protein-coding Atac153_MAPQ30_peak_2425 chr16 18156716 18156716 + 2.53401 NA Intergenic Intergenic 269803 NM_001282511 101059953 Hs.636569 NM_001282511 NPIPA8 LCR16a9 nuclear pore complex interacting protein family, member A8 protein-coding Atac153_MAPQ30_peak_6014 chr7 51424369 51424369 + 2.53401 NA Intergenic Intergenic -39854 NM_001287436 23242 Hs.99141 NM_015198 HPRD:10843 COBL - cordon-bleu WH2 repeat protein protein-coding Atac153_MAPQ30_peak_827 chr10 81028390 81028390 + 2.53401 NA intron (NM_020338, intron 7 of 24) L2b|LINE|L2 -78830 NM_005729 10105 Hs.381072 NM_005729 HPRD:06839 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding Atac153_MAPQ30_peak_6499 chr8 134197078 134197078 + 2.53401 NA Intergenic Intergenic -6204 NM_003882 8840 Hs.492974 NM_003882 WISP1 CCN4|WISP1c|WISP1i|WISP1tc WNT1 inducible signaling pathway protein 1 protein-coding Atac153_MAPQ30_peak_6582 chr9 5523336 5523336 + 2.53401 NA intron (NM_025239, intron 2 of 6) intron (NM_025239, intron 2 of 6) 12791 NM_025239 80380 Hs.532279 NM_025239 HPRD:16147 PDCD1LG2 B7DC|Btdc|CD273|PD-L2|PDCD1L2|PDL2|bA574F11.2 programmed cell death 1 ligand 2 protein-coding Atac153_MAPQ30_peak_2363 chr16 4254559 4254559 + 2.53401 NA exon (NM_001098814, exon 2 of 6) exon (NM_001098814, exon 2 of 6) 37522 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL - sarcalumenin protein-coding Atac153_MAPQ30_peak_2074 chr14 101982777 101982777 + 2.53401 NA Intergenic LTR16C|LTR|ERVL 39236 NR_002770 64150 Hs.525597 NR_002770 DIO3OS C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041 DIO3 opposite strand/antisense RNA (head to head) ncRNA Atac153_MAPQ30_peak_3228 chr19 13505577 13505577 + 2.53401 NA intron (NM_001174080, intron 3 of 46) MER39B|LTR|ERV1 111697 NM_001127222 773 Hs.501632 NM_000068 HPRD:03004 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|FHM|HPCA|MHP|MHP1|SCA6 calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein-coding Atac153_MAPQ30_peak_3809 chr2 179281125 179281125 + 2.53401 NA intron (NR_110206, intron 1 of 2) MER76|LTR|ERVL 2739 NR_110205 101927027 Hs.715694 NR_110204 ENSG00000223960 LOC101927027 - uncharacterized LOC101927027 ncRNA Atac153_MAPQ30_peak_4709 chr3 53743383 53743383 + 2.53401 NA intron (NM_000720, intron 9 of 48) MIR|SINE|MIR 137037 NM_018397 55349 Hs.126688 NM_018397 CHDH - choline dehydrogenase protein-coding Atac153_MAPQ30_peak_4679 chr3 50316017 50316017 + 2.53401 NA promoter-TSS (NM_153215) promoter-TSS (NM_153215) -501 NM_153215 132228 Hs.315177 NM_153215 HPRD:08789 LSMEM2 C3orf45 leucine-rich single-pass membrane protein 2 protein-coding Atac153_MAPQ30_peak_1002 chr10 131719474 131719474 + 2.53401 NA intron (NM_001005463, intron 6 of 15) intron (NM_001005463, intron 6 of 15) 42617 NM_001005463 253738 Hs.591374 NM_001005463 HPRD:16818 EBF3 COE3|EBF-3|O/E-2|OE-2 early B-cell factor 3 protein-coding Atac153_MAPQ30_peak_1027 chr10 134819040 134819040 + 2.53401 NA Intergenic Intergenic 40002 NR_046231 399829 Hs.252872 NR_046231 ENSG00000240707 LINC01168 - long intergenic non-protein coding RNA 1168 ncRNA Atac153_MAPQ30_peak_2985 chr18 3236359 3236359 + 2.53401 NA Intergenic L2a|LINE|L2 -11169 NM_006471 10627 Hs.190086 NM_006471 HPRD:14735 MYL12A HEL-S-24|MLCB|MRCL3|MRLC3|MYL2B myosin, light chain 12A, regulatory, non-sarcomeric protein-coding Atac153_MAPQ30_peak_6229 chr7 158047771 158047771 + 2.53401 NA intron (NM_130842, intron 2 of 21) intron (NM_130842, intron 2 of 21) 277734 NR_030325 693180 NR_030325 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA Atac153_MAPQ30_peak_576 chr1 230272038 230272038 + 2.53401 NA intron (NM_004481, intron 1 of 15) intron (NM_004481, intron 1 of 15) 69096 NM_004481 2590 Hs.743964 NM_004481 HPRD:03782 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding Atac153_MAPQ30_peak_6081 chr7 98064945 98064945 + 2.53401 NA Intergenic Intergenic -34518 NM_018842 55971 Hs.656063 NM_018842 HPRD:11270 BAIAP2L1 IRTKS BAI1-associated protein 2-like 1 protein-coding Atac153_MAPQ30_peak_1568 chr12 75769794 75769794 + 2.53401 NA intron (NM_001286548, intron 2 of 17) HERVL-int|LTR|ERVL 14908 NM_001286548 84698 Hs.733835 NM_032606 HPRD:09659 CAPS2 - calcyphosine 2 protein-coding Atac153_MAPQ30_peak_6058 chr7 71441354 71441354 + 2.53401 NA intron (NM_031468, intron 5 of 6) intron (NM_031468, intron 5 of 6) 360854 NM_001017440 83698 Hs.592750 NM_031468 HPRD:06209 CALN1 CABP8 calneuron 1 protein-coding Atac153_MAPQ30_peak_866 chr10 97371815 97371815 + 2.53401 NA intron (NM_002860, intron 15 of 17) intron (NM_002860, intron 15 of 17) 44752 NM_002860 5832 Hs.500645 NM_002860 HPRD:00696 ALDH18A1 ARCL3A|GSAS|P5CS|PYCS aldehyde dehydrogenase 18 family, member A1 protein-coding Atac153_MAPQ30_peak_1345 chr11 117952359 117952359 + 2.53401 NA intron (NM_001290094, intron 1 of 12) intron (NM_001290094, intron 1 of 12) 4632 NM_001173552 56649 Hs.161985 NM_019894 TMPRSS4 CAPH2|MT-SP2|TMPRSS3 transmembrane protease, serine 4 protein-coding Atac153_MAPQ30_peak_6552 chr8 143410890 143410890 + 2.53401 NA intron (NM_001291931, intron 4 of 10) intron (NM_001291931, intron 4 of 10) 73720 NM_145003 203062 Hs.370931 NM_145003 HPRD:08708 TSNARE1 - t-SNARE domain containing 1 protein-coding Atac153_MAPQ30_peak_5061 chr4 36429990 36429990 + 2.53401 NA Intergenic L1PA14|LINE|L1 144346 NM_001170700 401124 Hs.363407 NM_001136536 DTHD1 - death domain containing 1 protein-coding Atac153_MAPQ30_peak_6214 chr7 155556943 155556943 + 2.53401 NA intron (NM_053043, intron 15 of 17) intron (NM_053043, intron 15 of 17) 48024 NM_000193 6469 Hs.164537 NM_000193 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|TPT|TPTPS sonic hedgehog protein-coding Atac153_MAPQ30_peak_1982 chr14 73721029 73721029 + 2.53401 NA intron (NM_173462, intron 11 of 25) intron (NM_173462, intron 11 of 25) 16824 NM_173462 89932 Hs.509909 NM_173462 HPRD:15099 PAPLN - papilin, proteoglycan-like sulfated glycoprotein protein-coding Atac153_MAPQ30_peak_4979 chr4 3711473 3711473 + 2.53401 NA Intergenic Intergenic -31891 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LOC100133461 - uncharacterized LOC100133461 ncRNA Atac153_MAPQ30_peak_5278 chr5 15555803 15555803 + 2.53401 NA intron (NM_001278317, intron 1 of 3) intron (NM_001278317, intron 1 of 3) 54256 NM_001278317 23194 Hs.433057 NM_012304 HPRD:05740 FBXL7 FBL6|FBL7 F-box and leucine-rich repeat protein 7 protein-coding Atac153_MAPQ30_peak_909 chr10 111632072 111632072 + 2.53401 NA intron (NR_030724, intron 14 of 18) MIR|SINE|MIR 51239 NM_001167604 7511 Hs.390623 NM_020383 HPRD:03899 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble protein-coding Atac153_MAPQ30_peak_889 chr10 104575810 104575810 + 2.53401 NA 3' UTR (NM_017787, exon 4 of 4) 3' UTR (NM_017787, exon 4 of 4) 21480 NM_000102 1586 Hs.438016 NM_000102 HPRD:01944 CYP17A1 CPT7|CYP17|P450C17|S17AH cytochrome P450, family 17, subfamily A, polypeptide 1 protein-coding Atac153_MAPQ30_peak_5859 chr6 168449766 168449766 + 2.53401 NA Intergenic Intergenic 26780 NM_001122841 79981 Hs.266746 NM_024919 HPRD:10997 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding Atac153_MAPQ30_peak_5458 chr5 153861566 153861566 + 2.53401 NA Intergenic MIRb|SINE|MIR -3742 NM_004821 9421 Hs.152531 NM_004821 HPRD:03871 HAND1 Hxt|Thing1|bHLHa27|eHand heart and neural crest derivatives expressed 1 protein-coding Atac153_MAPQ30_peak_1641 chr12 111494064 111494064 + 2.53401 NA intron (NM_015267, intron 1 of 21) MLT1G3|LTR|ERVL-MaLR 22236 NM_015267 23316 Hs.124953 NM_015267 HPRD:10851 CUX2 CDP2|CUTL2 cut-like homeobox 2 protein-coding Atac153_MAPQ30_peak_2771 chr17 21908604 21908604 + 2.53401 NA intron (NR_027084, intron 1 of 1) SST1|Satellite|centr 4542 NR_027084 284124 Hs.310247 NR_027084 FLJ36000 - uncharacterized FLJ36000 ncRNA Atac153_MAPQ30_peak_1830 chr13 72716728 72716728 + 2.53401 NA Intergenic Intergenic -275398 NM_004392 1602 Hs.129452 NM_004392 HPRD:16031 DACH1 DACH dachshund family transcription factor 1 protein-coding Atac153_MAPQ30_peak_3277 chr19 32584031 32584031 + 2.53401 NA Intergenic Intergenic 12791 NR_110694 101927411 Hs.515337 NR_110694 ENSG00000267204 LOC101927411 - uncharacterized LOC101927411 ncRNA Atac153_MAPQ30_peak_5240 chr5 6410472 6410472 + 2.53401 NA Intergenic L2|LINE|L2 -31833 NM_032286 84246 Hs.13885 NM_032286 HPRD:14680 MED10 NUT2|TRG20 mediator complex subunit 10 protein-coding Atac153_MAPQ30_peak_4716 chr3 55392151 55392151 + 2.53401 NA Intergenic Intergenic 123275 NM_001256105 7474 Hs.643085 NM_003392 HPRD:01293 WNT5A hWNT5A wingless-type MMTV integration site family, member 5A protein-coding Atac153_MAPQ30_peak_303 chr1 93901758 93901758 + 2.53401 NA Intergenic MLT1D|LTR|ERVL-MaLR -11930 NM_017737 54874 Hs.134060 NM_017737 HPRD:12317 FNBP1L C1orf39|TOCA1 formin binding protein 1-like protein-coding Atac153_MAPQ30_peak_3481 chr2 29287256 29287256 + 2.53401 NA 3' UTR (NM_001029883, exon 2 of 2) 3' UTR (NM_001029883, exon 2 of 2) 9871 NM_001029883 388939 Hs.354243 NM_001029883 ENSG00000179270 C2orf71 RP54 chromosome 2 open reading frame 71 protein-coding Atac153_MAPQ30_peak_2775 chr17 25571299 25571299 + 2.53401 NA Intergenic Intergenic 49723 NR_039748 100616277 NR_039748 miRBase:MI0016889 MIR4522 - microRNA 4522 ncRNA Atac153_MAPQ30_peak_6325 chr8 26472543 26472543 + 2.53401 NA intron (NM_001197293, intron 3 of 13) intron (NM_001197293, intron 3 of 13) 36622 NM_001244604 1808 Hs.593187 NM_001386 HPRD:03914 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase-like 2 protein-coding Atac153_MAPQ30_peak_1963 chr14 69058047 69058047 + 2.53401 NA intron (NM_133509, intron 10 of 10) intron (NM_133509, intron 10 of 10) 202584 NM_004926 677 Hs.85155 NM_004926 HPRD:03041 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein-like 1 protein-coding Atac153_MAPQ30_peak_4064 chr20 31622170 31622170 + 2.53401 NA intron (NM_174897, intron 3 of 14) L2b|LINE|L2 2716 NM_174897 128859 Hs.375090 NM_174897 HPRD:16561 BPIFB6 BPIL3|LPLUNC6 BPI fold containing family B, member 6 protein-coding Atac153_MAPQ30_peak_6122 chr7 127805196 127805196 + 2.53401 NA Intergenic Intergenic -42729 NR_029596 406917 NR_029596 miRBase:MI0000252 MIR129-1 MIR-129b|MIRN129-1 microRNA 129-1 ncRNA Atac153_MAPQ30_peak_5594 chr6 13166725 13166725 + 2.53401 NA intron (NM_030948, intron 6 of 14) intron (NM_030948, intron 6 of 14) 129093 NM_001242698 100130357 Hs.657498 NM_001242698 LOC100130357 - uncharacterized LOC100130357 protein-coding Atac153_MAPQ30_peak_5884 chr7 1422789 1422789 + 2.53401 NA Intergenic Intergenic 76320 NM_182924 79778 Hs.376617 NM_024723 HPRD:11364 MICALL2 JRAB|MICAL-L2 MICAL-like 2 protein-coding Atac153_MAPQ30_peak_4124 chr20 44450741 44450741 + 2.53401 NA Intergenic MIR|SINE|MIR 5212 NM_003279 7125 Hs.182421 NM_003279 HPRD:08929 TNNC2 - troponin C type 2 (fast) protein-coding Atac153_MAPQ30_peak_4937 chr3 186988114 186988114 + 2.53401 NA intron (NR_033519, intron 1 of 9) MER31A|LTR|ERV1 21696 NM_001879 5648 Hs.89983 NM_001879 HPRD:02749 MASP1 3MC1|CRARF|CRARF1|MAP1|MASP|MASP3|MAp44|PRSS5|RaRF mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) protein-coding Atac153_MAPQ30_peak_3814 chr2 184857997 184857997 + 2.53401 NA Intergenic L1PA16|LINE|L1 -605096 NM_194250 91752 Hs.159528 NM_194250 HPRD:12804 ZNF804A C2orf10 zinc finger protein 804A protein-coding Atac153_MAPQ30_peak_1365 chr11 123462812 123462812 + 2.53401 NA intron (NM_001286563, intron 4 of 20) intron (NM_001286563, intron 4 of 20) 31842 NM_001286564 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B - GRAM domain containing 1B protein-coding Atac153_MAPQ30_peak_640 chr10 2738173 2738173 + 2.53401 NA Intergenic MIR|SINE|MIR -371539 NM_002627 5214 Hs.26010 NM_002627 HPRD:01384 PFKP ATP-PFK|PFK-C|PFK-P|PFKF phosphofructokinase, platelet protein-coding Atac153_MAPQ30_peak_478 chr1 202044388 202044388 + 2.53401 NA Intergenic Intergenic -47641 NM_004767 9283 Hs.132049 NM_004767 GPR37L1 ET(B)R-LP-2|ETBR-LP-2 G protein-coupled receptor 37 like 1 protein-coding Atac153_MAPQ30_peak_1302 chr11 104244230 104244230 + 2.53401 NA Intergenic Intergenic -209203 NM_025208 80310 Hs.352298 NM_025208 HPRD:17830 PDGFD IEGF|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding Atac153_MAPQ30_peak_2603 chr16 84348159 84348159 + 2.53401 NA intron (NM_021197, intron 2 of 6) intron (NM_021197, intron 2 of 6) 19847 NM_001282466 58189 Hs.36688 NM_021197 HPRD:05614 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding Atac153_MAPQ30_peak_7227 chrX 136134112 136134112 + 2.53401 NA Intergenic MIR|SINE|MIR -20279 NM_054021 83550 Hs.350569 NM_054021 HPRD:02315 GPR101 GPCR6 G protein-coupled receptor 101 protein-coding Atac153_MAPQ30_peak_2805 chr17 34191270 34191270 + 2.53401 NA exon (NM_152781, exon 6 of 15) exon (NM_152781, exon 6 of 15) 4625 NM_152781 256957 Hs.514820 NM_152781 HPRD:08142 HEATR9 C17orf66 HEAT repeat containing 9 protein-coding Atac153_MAPQ30_peak_5586 chr6 8274657 8274657 + 2.53401 NA Intergenic Intergenic 161143 NM_001142541 51000 Hs.285847 NM_015948 HPRD:11577 SLC35B3 C6orf196|PAPST2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 protein-coding Atac153_MAPQ30_peak_4255 chr21 35608357 35608357 + 2.53401 NA Intergenic Intergenic 55379 NR_027266 114036 Hs.720230 NM_153751 ENSG00000227456 LINC00310 C21orf82|NCRNA00310 long intergenic non-protein coding RNA 310 ncRNA Atac153_MAPQ30_peak_4643 chr3 40457167 40457167 + 2.53401 NA intron (NM_001291960, intron 6 of 10) MER102b|DNA|hAT-Charlie 28431 NM_001291960 956 Hs.441145 NM_001248 HPRD:16014 ENTPD3 CD39L3|HB6|NTPDase-3 ectonucleoside triphosphate diphosphohydrolase 3 protein-coding Atac153_MAPQ30_peak_2498 chr16 49606606 49606606 + 2.53401 NA intron (NM_015069, intron 5 of 7) intron (NM_015069, intron 5 of 7) 198798 NM_144602 123970 Hs.125875 NM_144602 HPRD:14560 C16orf78 - chromosome 16 open reading frame 78 protein-coding Atac153_MAPQ30_peak_293 chr1 83985410 83985410 + 2.53401 NA Intergenic MLT1F2|LTR|ERVL-MaLR 340819 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA Atac153_MAPQ30_peak_4450 chr22 40194715 40194715 + 2.53401 NA intron (NM_152512, intron 5 of 6) L1MA4A|LINE|L1 95079 NM_152512 150350 Hs.474869 NM_152512 HPRD:08063 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding Atac153_MAPQ30_peak_3017 chr18 11734519 11734519 + 2.53401 NA intron (NM_182978, intron 1 of 11) intron (NM_182978, intron 1 of 11) -16952 NM_001261443 2774 Hs.136295 NM_002071 HPRD:00758 GNAL DYT25 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type protein-coding Atac153_MAPQ30_peak_5791 chr6 136430061 136430061 + 2.53401 NA intron (NM_018945, intron 3 of 12) intron (NM_018945, intron 3 of 12) 141388 NM_138419 113115 Hs.121536 NM_138419 HPRD:16884 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding Atac153_MAPQ30_peak_4839 chr3 129392857 129392857 + 2.53401 NA intron (NM_001017395, intron 3 of 5) Tigger3a|DNA|TcMar-Tigger 14718 NR_033361 23023 Hs.477547 NM_015008 HPRD:15518 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding Atac153_MAPQ30_peak_446 chr1 178945848 178945848 + 2.53401 NA Intergenic L1MA4|LINE|L1 -49226 NM_014864 9917 Hs.5737 NM_014864 HPRD:13297 FAM20B gxk1 family with sequence similarity 20, member B protein-coding Atac153_MAPQ30_peak_3828 chr2 201255288 201255288 + 2.53401 NA intron (NM_001282735, intron 3 of 12) L2a|LINE|L2 81615 NM_001282744 26010 Hs.120323 NM_015535 HPRD:10916 SPATS2L DNAPTP6|SGNP spermatogenesis associated, serine-rich 2-like protein-coding Atac153_MAPQ30_peak_6106 chr7 106622843 106622843 + 2.53401 NA Intergenic Intergenic -62335 NM_002736 5577 Hs.433068 NM_002736 HPRD:01486 PRKAR2B PRKAR2|RII-BETA protein kinase, cAMP-dependent, regulatory, type II, beta protein-coding Atac153_MAPQ30_peak_7276 chrX 150131749 150131749 + 2.53401 NA Intergenic Intergenic -17232 NM_001301231 3149 Hs.19114 NM_005342 HPRD:02181 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding Atac153_MAPQ30_peak_4323 chr21 46902724 46902724 + 2.53401 NA exon (NM_130445, exon 15 of 43) exon (NM_130445, exon 15 of 43) 4544 NR_106873 102465489 NR_106873 MIR6815 hsa-mir-6815 microRNA 6815 ncRNA Atac153_MAPQ30_peak_7074 chrX 67885175 67885175 + 2.53401 NA intron (NM_014725, intron 1 of 13) MIR3|SINE|MIR 17664 NM_014725 9754 Hs.95140 NM_014725 HPRD:06730 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR-related lipid transfer (START) domain containing 8 protein-coding Atac153_MAPQ30_peak_331 chr1 112796561 112796561 + 2.53401 NA Intergenic Intergenic -142239 NM_018704 55917 Hs.744100 NM_018704 HPRD:10906 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding Atac153_MAPQ30_peak_3591 chr2 81424416 81424416 + 2.53401 NA Intergenic Intergenic 269654 NR_110161 100507201 Hs.98589 NR_110161 LOC100507201 - uncharacterized LOC100507201 ncRNA Atac153_MAPQ30_peak_3462 chr2 25943143 25943143 + 2.53401 NA Intergenic Intergenic -46627 NM_033148 1838 Hs.307720 NM_021907 HPRD:09091 DTNB - dystrobrevin, beta protein-coding Atac153_MAPQ30_peak_2427 chr16 19195239 19195239 + 2.53401 NA exon (NM_016524, exon 5 of 8) exon (NM_016524, exon 5 of 8) 15601 NM_016524 51760 Hs.258326 NM_016524 SYT17 - synaptotagmin XVII protein-coding Atac153_MAPQ30_peak_7184 chrX 120210222 120210222 + 2.53401 NA Intergenic THE1C|LTR|ERVL-MaLR 28760 NM_012084 2747 Hs.368538 NM_012084 HPRD:02143 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding Atac153_MAPQ30_peak_2326 chr15 96829971 96829971 + 2.53401 NA intron (NR_102743, intron 3 of 7) intron (NR_102743, intron 3 of 7) -39186 NM_001145155 7026 Hs.347991 NM_021005 HPRD:00139 NR2F2 ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2 nuclear receptor subfamily 2, group F, member 2 protein-coding Atac153_MAPQ30_peak_4196 chr20 58999649 58999649 + 2.53401 NA Intergenic Intergenic 48385 NR_109903 101928048 Hs.572803 NR_109903 LOC101928048 - uncharacterized LOC101928048 ncRNA Atac153_MAPQ30_peak_2598 chr16 82868273 82868273 + 2.53401 NA intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 61349 NR_110938 101928446 Hs.684007 NR_110938 LOC101928446 - uncharacterized LOC101928446 ncRNA Atac153_MAPQ30_peak_5495 chr5 170873206 170873206 + 2.53401 NA intron (NM_003862, intron 3 of 4) intron (NM_003862, intron 3 of 4) 26539 NM_003862 8817 Hs.87191 NM_003862 HPRD:04766 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding Atac153_MAPQ30_peak_7237 chrX 137616154 137616154 + 2.53401 NA Intergenic L1PA17|LINE|L1 83645 NR_026935 158696 Hs.558664 NR_026935 LINC00889 - long intergenic non-protein coding RNA 889 ncRNA Atac153_MAPQ30_peak_2936 chr17 74562168 74562168 + 2.53401 NA TTS (NR_038111) TTS (NR_038111) 4453 NR_004395 677848 NR_004395 ENSG00000163597 SNORD1A R38A|snR38A small nucleolar RNA, C/D box 1A snoRNA Atac153_MAPQ30_peak_689 chr10 22747906 22747906 + 2.53401 NA Intergenic Intergenic -21048 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA Atac153_MAPQ30_peak_6661 chr9 84900682 84900682 + 2.53401 NA Intergenic L1M1|LINE|L1 296995 NM_001001670 389763 Hs.209545 NM_001001670 HPRD:13531 SPATA31D1 FAM75D1 SPATA31 subfamily D, member 1 protein-coding Atac153_MAPQ30_peak_7200 chrX 124771492 124771492 + 2.53401 NA Intergenic HERVL-int|LTR|ERVL 317523 NM_001195272 100129520 Hs.728728 NM_001195272 LOC100129520 - testis expressed sequence 13-like protein-coding Atac153_MAPQ30_peak_2035 chr14 94057174 94057174 + 2.53401 NA intron (NM_020818, intron 22 of 49) L2a|LINE|L2 197592 NM_178013 145270 Hs.432401 NM_178004 HPRD:17907 PRIMA1 PRIMA proline rich membrane anchor 1 protein-coding Atac153_MAPQ30_peak_1573 chr12 84797470 84797470 + 2.53401 NA Intergenic HERVL-int|LTR|ERVL 509138 NM_018057 55117 Hs.44424 NM_018057 HPRD:12141 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 (neutral amino acid transporter), member 15 protein-coding Atac153_MAPQ30_peak_4298 chr21 43256553 43256553 + 2.53401 NA intron (NR_104260, intron 9 of 25) (CCCCAG)n|Simple_repeat|Simple_repeat 26858 NR_104260 63977 Hs.473893 NM_022115 HPRD:11458 PRDM15 C21orf83|PFM15|ZNF298 PR domain containing 15 protein-coding Atac153_MAPQ30_peak_1532 chr12 54453700 54453700 + 2.53401 NA intron (NR_026655, intron 1 of 1) intron (NR_026655, intron 1 of 1) 1662 NR_026655 440101 Hs.350378 NR_026655 ENSG00000248265 FLJ12825 - uncharacterized LOC440101 ncRNA Atac153_MAPQ30_peak_3704 chr2 122911490 122911490 + 2.53401 NA Intergenic Intergenic 398369 NR_048557 7247 Hs.75066 NM_004622 HPRD:08993 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding Atac153_MAPQ30_peak_3101 chr18 47602538 47602538 + 2.53401 NA intron (NM_001080467, intron 1 of 39) intron (NM_001080467, intron 1 of 39) 50395 NR_036204 100422865 NR_036204 MIR4320 - microRNA 4320 ncRNA Atac153_MAPQ30_peak_4052 chr20 25196245 25196245 + 2.53401 NA intron (NM_001114089, intron 5 of 13) intron (NM_001114089, intron 5 of 13) -18717 NR_109994 101926889 Hs.585997 NR_109994 LOC101926889 - uncharacterized LOC101926889 ncRNA Atac153_MAPQ30_peak_3520 chr2 45472331 45472331 + 2.53401 NA intron (NR_033831, intron 1 of 5) intron (NR_033831, intron 1 of 5) 9749 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA Atac153_MAPQ30_peak_3259 chr19 28506210 28506210 + 2.53401 NA Intergenic Intergenic -221362 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA Atac153_MAPQ30_peak_3663 chr2 109015035 109015035 + 2.53401 NA Intergenic MER4-int|LTR|ERV1 20614 NM_006588 27233 Hs.312644 NM_006588 HPRD:07461 SULT1C4 SULT1C|SULT1C2 sulfotransferase family, cytosolic, 1C, member 4 protein-coding Atac153_MAPQ30_peak_5909 chr7 5671928 5671928 + 2.53401 NA intron (NM_207111, intron 15 of 16) intron (NM_207111, intron 15 of 16) 39492 NM_003088 6624 Hs.118400 NM_003088 HPRD:04068 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding Atac153_MAPQ30_peak_3058 chr18 35123295 35123295 + 2.53401 NA intron (NM_001025087, intron 1 of 12) intron (NM_001025087, intron 1 of 12) 22705 NM_001025089 56853 Hs.435976 NM_020180 HPRD:12534 CELF4 BRUNOL-4|BRUNOL4 CUGBP, Elav-like family member 4 protein-coding Atac153_MAPQ30_peak_1770 chr13 25275159 25275159 + 2.53401 NA intron (NM_001185085, intron 13 of 22) intron (NM_001185085, intron 13 of 22) 20610 NM_001185085 479 Hs.147111 NM_001676 HPRD:01667 ATP12A ATP1AL1 ATPase, H+/K+ transporting, nongastric, alpha polypeptide protein-coding Atac153_MAPQ30_peak_4385 chr22 29332212 29332212 + 2.53401 NA intron (NM_032173, intron 1 of 8) intron (NM_032173, intron 1 of 8) 18835 NM_032173 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding Atac153_MAPQ30_peak_5848 chr6 166684520 166684520 + 2.53401 NA Intergenic HERVL32-int|LTR|ERVL 37351 NM_175922 285800 Hs.731862 NM_175922 HPRD:17533 PRR18 - proline rich 18 protein-coding Atac153_MAPQ30_peak_6623 chr9 37364239 37364239 + 2.53401 NA Intergenic Intergenic -58468 NM_012203 9380 Hs.155742 NM_012203 HPRD:05052 GRHPR GLXR|GLYD|PH2 glyoxylate reductase/hydroxypyruvate reductase protein-coding Atac153_MAPQ30_peak_2991 chr18 6014410 6014410 + 2.53401 NA intron (NM_173464, intron 17 of 19) L2b|LINE|L2 -122307 NM_001080209 645369 Hs.346566 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding Atac153_MAPQ30_peak_454 chr1 181092437 181092437 + 2.53401 NA Intergenic Intergenic 34799 NM_016545 51278 Hs.15725 NM_016545 HPRD:06210 IER5 SBBI48 immediate early response 5 protein-coding Atac153_MAPQ30_peak_5979 chr7 43954870 43954870 + 2.53401 NA intron (NM_001290076, intron 1 of 6) MER61-int|LTR|ERV1 -8202 NM_001077663 55665 Hs.663312 NM_017920 HPRD:11663 URGCP URG4 upregulator of cell proliferation protein-coding Atac153_MAPQ30_peak_7266 chrX 148160967 148160967 + 2.53401 NA Intergenic HERVL18-int|LTR|ERVL 360352 NM_001170628 2334 Hs.496911 NM_002025 HPRD:02397 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family, member 2 protein-coding Atac153_MAPQ30_peak_2852 chr17 47279138 47279138 + 2.53401 NA Intergenic Intergenic 7605 NM_031498 2793 Hs.181781 NM_031498 HPRD:06792 GNGT2 G-GAMMA-8|G-GAMMA-C|GNG8|GNG9|GNGT8 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 protein-coding Atac153_MAPQ30_peak_3527 chr2 47048726 47048726 + 2.53401 NA intron (NR_034099, intron 3 of 3) intron (NR_034099, intron 3 of 3) 4919 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA Atac153_MAPQ30_peak_3281 chr19 33744187 33744187 + 2.53401 NA Intergenic Intergenic -27431 NM_019849 56301 Hs.58679 NM_019849 HPRD:12137 SLC7A10 HASC-1|asc-1 solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10 protein-coding Atac153_MAPQ30_peak_5936 chr7 26348927 26348927 + 2.53401 NA intron (NM_001199835, intron 1 of 6) intron (NM_001199835, intron 1 of 6) 17412 NM_013322 29887 Hs.741316 NM_013322 HPRD:15409 SNX10 OPTB8 sorting nexin 10 protein-coding Atac153_MAPQ30_peak_4474 chr22 45309494 45309494 + 2.53401 NA intron (NM_138415, intron 5 of 12) intron (NM_138415, intron 5 of 12) 95380 NM_001284296 112885 Hs.254097 NM_138415 HPRD:13997 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding Atac153_MAPQ30_peak_5541 chr5 178715252 178715252 + 2.53401 NA intron (NM_021599, intron 2 of 10) intron (NM_021599, intron 2 of 10) 57179 NM_021599 9509 Hs.23871 NM_014244 HPRD:05173 ADAMTS2 ADAM-TS2|ADAMTS-2|ADAMTS-3|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI ADAM metallopeptidase with thrombospondin type 1 motif, 2 protein-coding Atac153_MAPQ30_peak_6438 chr8 99322117 99322117 + 2.53401 NA Intergenic LTR39|LTR|ERV1 -15496 NM_024759 79815 Hs.309489 NM_024759 NIPAL2 NPAL2 NIPA-like domain containing 2 protein-coding Atac153_MAPQ30_peak_1334 chr11 116047664 116047664 + 2.53401 NA Intergenic Intergenic -416746 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA Atac153_MAPQ30_peak_1550 chr12 60786219 60786219 + 2.53401 NA Intergenic MER52A|LTR|ERV1 703101 NR_073056 9194 Hs.88156 NM_004731 HPRD:06791 SLC16A7 MCT2 solute carrier family 16 (monocarboxylate transporter), member 7 protein-coding Atac153_MAPQ30_peak_2618 chr16 86486363 86486363 + 2.53401 NA Intergenic MLT1H1|LTR|ERVL-MaLR 56103 NR_036444 400550 Hs.448825 NR_033925 ENSG00000268388 FENDRR FOXF1-AS1|TCONS_00024240|lincFOXF1 FOXF1 adjacent non-coding developmental regulatory RNA ncRNA Atac153_MAPQ30_peak_7107 chrX 77421146 77421146 + 2.53401 NA Intergenic Intergenic -25967 NM_015975 51616 Hs.592248 NM_015975 HPRD:06739 TAF9B DN-7|DN7|TAF9L|TAFII31L|TFIID-31 TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa protein-coding Atac153_MAPQ30_peak_4831 chr3 128267257 128267257 + 2.53401 NA Intergenic MLT1K|LTR|ERVL-MaLR 27672 NM_007354 23434 Hs.194283 NM_007354 HPRD:13607 C3orf27 GR6 chromosome 3 open reading frame 27 ncRNA Atac153_MAPQ30_peak_2489 chr16 34701650 34701650 + 2.53401 NA Intergenic HERVL40-int|LTR|ERVL 13317 NR_026980 146481 Hs.316564 NR_026980 LOC146481 - FSHD region gene 2 family, member C pseudogene pseudo Atac153_MAPQ30_peak_587 chr1 231941415 231941415 + 2.53401 NA intron (NM_001012959, intron 8 of 9) MSTA|LTR|ERVL-MaLR 12848 NR_002227 27184 Hs.720568 NR_002227 DISC2 DISC1-AS1|DISC1OS|NCRNA00015 disrupted in schizophrenia 2 (non-protein coding) ncRNA Atac153_MAPQ30_peak_1949 chr14 64920876 64920876 + 2.53401 NA intron (NM_005956, intron 25 of 27) AluJo|SINE|Alu 6563 NR_106755 102466162 NR_106755 MIR548AZ hsa-mir-548az microRNA 548az ncRNA Atac153_MAPQ30_peak_6355 chr8 41377039 41377039 + 2.53401 NA Intergenic Intergenic -9686 NM_032336 84296 Hs.656996 NM_032336 HPRD:11583 GINS4 SLD5 GINS complex subunit 4 (Sld5 homolog) protein-coding Atac153_MAPQ30_peak_397 chr1 157223108 157223108 + 2.53401 NA Intergenic Intergenic -114725 NM_001145312 2117 Hs.105636 NM_005240 HPRD:01282 ETV3 METS|PE-1|PE1|bA110J1.4 ets variant 3 protein-coding Atac153_MAPQ30_peak_6024 chr7 56025256 56025256 + 2.53401 NA Intergenic Intergenic 5645 NM_015969 51373 Hs.44298 NM_015969 HPRD:14779 MRPS17 HSPC011|MRP-S17|RPMS17|S17mt mitochondrial ribosomal protein S17 protein-coding Atac153_MAPQ30_peak_3438 chr2 18406546 18406546 + 2.53401 NA Intergenic L1PA15|LINE|L1 335413 NM_020905 57665 Hs.120319 NM_020905 HPRD:10190 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 (all-trans/9-cis/11-cis) protein-coding Atac153_MAPQ30_peak_3968 chr20 1025723 1025723 + 2.53401 NA Intergenic Intergenic -42816 NM_001029871 343637 Hs.444980 NM_001029871 ENSG00000101282 RSPO4 C20orf182|CRISTIN4 R-spondin 4 protein-coding Atac153_MAPQ30_peak_3315 chr19 43811914 43811914 + 2.53401 NA Intergenic Intergenic -38232 NM_002784 5678 Hs.502092 NM_002784 HPRD:08897 PSG9 PS34|PSBG-11|PSBG-9|PSG11|PSGII pregnancy specific beta-1-glycoprotein 9 protein-coding Atac153_MAPQ30_peak_4662 chr3 46253884 46253884 + 2.53401 NA Intergenic Intergenic -4052 NM_001295 1230 Hs.301921 NM_001295 HPRD:03101 CCR1 CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1 chemokine (C-C motif) receptor 1 protein-coding Atac153_MAPQ30_peak_56 chr1 9139004 9139004 + 2.53401 NA Intergenic Intergenic -9117 NM_003039 6518 Hs.530003 NM_003039 HPRD:00690 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 protein-coding Atac153_MAPQ30_peak_6691 chr9 93941978 93941978 + 2.53401 NA Intergenic Intergenic -104564 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA Atac153_MAPQ30_peak_2123 chr15 29989267 29989267 + 2.53401 NA Intergenic Intergenic 124484 NM_001301026 7082 Hs.743990 NM_003257 HPRD:03002 TJP1 ZO-1 tight junction protein 1 protein-coding Atac153_MAPQ30_peak_3638 chr2 98993989 98993989 + 2.53401 NA intron (NM_001079878, intron 2 of 6) intron (NM_001079878, intron 2 of 6) 31371 NM_001298 1261 Hs.234785 NM_001298 HPRD:02504 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding Atac153_MAPQ30_peak_4207 chr20 60775646 60775646 + 2.53401 NA intron (NM_015666, intron 6 of 6) intron (NM_015666, intron 6 of 6) 17565 NM_015666 26164 Hs.340636 NM_015666 HPRD:13617 MTG2 GTPBP5|ObgH1|dJ1005F21.2 mitochondrial ribosome-associated GTPase 2 protein-coding Atac153_MAPQ30_peak_844 chr10 87014153 87014153 + 2.53401 NA Intergenic Intergenic -55459 NR_120667 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA Atac153_MAPQ30_peak_6698 chr9 95379233 95379233 + 2.53401 NA intron (NM_022755, intron 12 of 12) intron (NM_022755, intron 12 of 12) -1099 NR_036505 100128361 Hs.660395 NR_036505 LOC100128361 - uncharacterized LOC100128361 ncRNA Atac153_MAPQ30_peak_6261 chr8 5379077 5379077 + 2.53401 NA Intergenic LTR88b|LTR|Gypsy? -526749 NM_033225 64478 Hs.571466 NM_033225 HPRD:10523 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding Atac153_MAPQ30_peak_376 chr1 153222163 153222163 + 2.53401 NA Intergenic L2c|LINE|L2 -10016 NM_000427 4014 Hs.251680 NM_000427 HPRD:01070 LOR - loricrin protein-coding Atac153_MAPQ30_peak_7126 chrX 93616553 93616553 + 2.53401 NA Intergenic LTR8|LTR|ERV1 687541 NM_001171111 286499 Hs.110069 NM_173698 HPRD:06562 FAM133A CT115 family with sequence similarity 133, member A protein-coding Atac153_MAPQ30_peak_6046 chr7 68289902 68289902 + 2.53401 NA Intergenic MSTB|LTR|ERVL-MaLR 772579 NR_108105 100507468 Hs.362492 NR_108105 LOC100507468 - uncharacterized LOC100507468 ncRNA Atac153_MAPQ30_peak_3975 chr20 2223567 2223567 + 2.53401 NA Intergenic Intergenic 35993 NM_001287682 388780 Hs.132163 NM_001287682 LOC388780 - uncharacterized LOC388780 protein-coding Atac153_MAPQ30_peak_1091 chr11 12297643 12297643 + 2.53401 NA Intergenic Intergenic -10804 NM_032867 84953 Hs.128196 NM_032867 HPRD:08610 MICALCL Ebitein1 MICAL C-terminal like protein-coding Atac153_MAPQ30_peak_1090 chr11 12187095 12187095 + 2.53401 NA intron (NM_001282665, intron 2 of 21) intron (NM_001282665, intron 2 of 21) 1865 NR_106739 102466906 NR_106739 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA Atac153_MAPQ30_peak_5898 chr7 3143883 3143883 + 2.53401 NA Intergenic Intergenic -60304 NM_032415 84433 Hs.648101 NM_032415 HPRD:06234 CARD11 BENTA|BIMP3|CARMA1|IMD11|PPBL caspase recruitment domain family, member 11 protein-coding Atac153_MAPQ30_peak_320 chr1 110796658 110796658 + 2.53401 NA Intergenic Intergenic 43322 NM_004978 3749 Hs.153521 NM_004978 HPRD:08887 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel, Shaw-related subfamily, member 4 protein-coding Atac153_MAPQ30_peak_62 chr1 9918173 9918173 + 2.53401 NA intron (NM_001012329, intron 4 of 4) L2b|LINE|L2 -33623 NM_014944 22883 Hs.29665 NM_014944 HPRD:10837 CLSTN1 ALC-ALPHA|CDHR12|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding Atac153_MAPQ30_peak_861 chr10 95075441 95075441 + 2.53401 NA intron (NM_133337, intron 49 of 52) intron (NM_133337, intron 49 of 52) 166633 NM_133337 26509 Hs.602086 NM_013451 HPRD:06857 MYOF FER1L3 myoferlin protein-coding Atac153_MAPQ30_peak_2886 chr17 60898852 60898852 + 2.53401 NA intron (NR_036146, intron 3 of 3) intron (NR_036146, intron 3 of 3) -13110 NM_152598 162333 Hs.665663 NM_152598 HPRD:08762 MARCH10 MARCH-X|RNF190 membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_7274 chrX 149350918 149350918 + 2.53401 NA Intergenic MIRb|SINE|MIR -45321 NR_031748 100313839 NR_031748 miRBase:MI0010633 MIR2114 - microRNA 2114 ncRNA Atac153_MAPQ30_peak_7206 chrX 129560324 129560324 + 2.53401 NA Intergenic MIR3|SINE|MIR 24381 NM_016024 51634 Hs.740515 NM_016024 HPRD:06470 RBMX2 CGI-79 RNA binding motif protein, X-linked 2 protein-coding Atac153_MAPQ30_peak_6127 chr7 129091955 129091955 + 2.53401 NA intron (NM_020704, intron 4 of 20) intron (NM_020704, intron 4 of 20) 17681 NM_020704 57464 Hs.489988 NM_020704 HPRD:16880 STRIP2 FAM40B|FAR11B striatin interacting protein 2 protein-coding Atac153_MAPQ30_peak_1184 chr11 47194114 47194114 + 2.53401 NA intron (NM_001242832, intron 6 of 14) intron (NM_001242832, intron 6 of 14) 4562 NM_001242832 84364 Hs.436204 NM_032389 HPRD:06069 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP-ribosylation factor GTPase activating protein 2 protein-coding Atac153_MAPQ30_peak_6738 chr9 108754735 108754735 + 2.53401 NA Intergenic Intergenic 297929 NM_018112 55151 Hs.411925 NM_018112 HPRD:15538 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding Atac153_MAPQ30_peak_2471 chr16 29823799 29823799 + 2.53401 NA intron (NM_001256443, intron 1 of 1) CpG 390 NM_145239 112476 Hs.655071 NM_145239 HPRD:13995 PRRT2 BFIC2|BFIS2|DSPB3|DYT10|EKD1|FICCA|ICCA|IFITMD1|PKC proline-rich transmembrane protein 2 protein-coding Atac153_MAPQ30_peak_5011 chr4 8134830 8134830 + 2.53401 NA intron (NM_001130085, intron 1 of 17) MLT1C|LTR|ERVL-MaLR 25729 NM_001130083 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family, member 2 protein-coding Atac153_MAPQ30_peak_3043 chr18 32763965 32763965 + 2.53401 NA Intergenic MamRep1161|DNA|TcMar -57029 NM_032347 84307 Hs.591061 NM_032347 HPRD:18335 ZNF397 ZNF47|ZSCAN15 zinc finger protein 397 protein-coding Atac153_MAPQ30_peak_3305 chr19 42036811 42036811 + 2.53401 NA Intergenic Intergenic -5049 NR_110724 101927931 Hs.158951 NR_110724 LINC01480 - long intergenic non-protein coding RNA 1480 ncRNA Atac153_MAPQ30_peak_2048 chr14 96674750 96674750 + 2.53401 NA intron (NM_000623, intron 1 of 2) MIRb|SINE|MIR 3615 NM_000623 624 Hs.654542 NM_000623 HPRD:00213 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding Atac153_MAPQ30_peak_3428 chr2 16166106 16166106 + 2.53401 NA Intergenic THE1B|LTR|ERVL-MaLR -84261 NR_110230 10408 Hs.651453 NM_006316 ENSG00000233718 MYCNOS MYCN-AS1|N-CYM|NCYM|NYCM MYCN opposite strand ncRNA Atac153_MAPQ30_peak_1701 chr12 125330108 125330108 + 2.53401 NA intron (NM_001082959, intron 1 of 11) AluSx1|SINE|Alu 18411 NM_005505 949 Hs.731377 NM_005505 HPRD:03024 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B, member 1 protein-coding Atac153_MAPQ30_peak_6332 chr8 29665558 29665558 + 2.53401 NA Intergenic Intergenic -59933 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75 long intergenic non-protein coding RNA 589 ncRNA Atac153_MAPQ30_peak_5136 chr4 108378348 108378348 + 2.53401 NA Intergenic L2a|LINE|L2 263071 NM_005443 9061 Hs.368610 NM_005443 HPRD:09132 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding Atac153_MAPQ30_peak_1307 chr11 107083877 107083877 + 2.53401 NA Intergenic Intergenic -194706 NM_001256424 2977 Hs.24321 NM_000855 HPRD:03146 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1, soluble, alpha 2 protein-coding Atac153_MAPQ30_peak_5876 chr6 170799402 170799402 + 2.53401 NA Intergenic MLT1F1|LTR|ERVL-MaLR 63015 NM_002793 5689 Hs.352768 NM_002793 HPRD:03603 PSMB1 HC5|PMSB1|PSC5 proteasome (prosome, macropain) subunit, beta type, 1 protein-coding Atac153_MAPQ30_peak_5604 chr6 15998300 15998300 + 2.53401 NA Intergenic Intergenic -131017 NM_013262 29116 Hs.484738 NM_013262 HPRD:17621 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding Atac153_MAPQ30_peak_4908 chr3 170489368 170489368 + 2.53401 NA Intergenic Intergenic 98677 NM_001099645 200916 Hs.380933 NM_001099645 ENSG00000163584 RPL22L1 - ribosomal protein L22-like 1 protein-coding Atac153_MAPQ30_peak_5384 chr5 122369426 122369426 + 2.53401 NA intron (NM_000943, intron 1 of 4) MIRb|SINE|MIR 2999 NM_000943 5480 Hs.110364 NM_000943 HPRD:00459 PPIC CYPC peptidylprolyl isomerase C (cyclophilin C) protein-coding Atac153_MAPQ30_peak_1350 chr11 119500254 119500254 + 2.53401 NA Intergenic Intergenic 99181 NM_203286 5818 Hs.334846 NM_002855 HPRD:07200 PVRL1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRR|PVRR1|SK-12|nectin-1 poliovirus receptor-related 1 (herpesvirus entry mediator C) protein-coding Atac153_MAPQ30_peak_4383 chr22 28412467 28412467 + 2.53401 NA intron (NM_001145418, intron 13 of 22) intron (NM_001145418, intron 13 of 22) -95867 NR_036169 100423034 NR_036169 miRBase:MI0014247 MIR3199-1 - microRNA 3199-1 ncRNA Atac153_MAPQ30_peak_6328 chr8 27367892 27367892 + 2.53401 NA intron (NM_001256482, intron 5 of 18) intron (NM_001256482, intron 5 of 18) 19207 NM_001256484 2053 Hs.212088 NM_001979 HPRD:00582 EPHX2 CEH|SEH epoxide hydrolase 2, cytoplasmic protein-coding Atac153_MAPQ30_peak_2165 chr15 55343265 55343265 + 2.53401 NA Intergenic L2c|LINE|L2 145966 NM_016304 51187 Hs.274772 NM_016304 RSL24D1 C15orf15|HRP-L30-iso|L30|RLP24|RPL24|RPL24L|TVAS3 ribosomal L24 domain containing 1 protein-coding Atac153_MAPQ30_peak_2544 chr16 68095038 68095038 + 2.53401 NA intron (NM_017803, intron 8 of 16) intron (NM_017803, intron 8 of 16) -24231 NM_173163 4775 Hs.436585 NM_004555 HPRD:04077 NFATC3 NFAT4|NFATX nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 protein-coding Atac153_MAPQ30_peak_790 chr10 72728825 72728825 + 2.53401 NA Intergenic Intergenic -80282 NM_000281 5092 Hs.3192 NM_000281 HPRD:00523 PCBD1 DCOH|PCBD|PCD|PHS pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha protein-coding Atac153_MAPQ30_peak_5202 chr4 187435392 187435392 + 2.53401 NA Intergenic LTR47B|LTR|ERVL -13180 NR_033900 285441 Hs.481369 NR_033900 ENSG00000251165 F11-AS1 - F11 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5651 chr6 35435535 35435535 + 2.53401 NA promoter-TSS (NM_007104) promoter-TSS (NM_007104) -643 NM_007104 4736 Hs.148340 NM_007104 HPRD:10199 RPL10A CSA19|Csa-19|L10A|NEDD6 ribosomal protein L10a protein-coding Atac153_MAPQ30_peak_733 chr10 46965493 46965493 + 2.53401 NA intron (NM_031912, intron 5 of 7) intron (NM_031912, intron 5 of 7) 5108 NM_031912 83849 Hs.696346 NM_031912 HPRD:12161 SYT15 CHR10SYT|sytXV synaptotagmin XV protein-coding Atac153_MAPQ30_peak_1711 chr12 127294554 127294554 + 2.53401 NA Intergenic L2a|LINE|L2 -37746 NR_033878 387895 Hs.534660 NR_033878 LINC00944 - long intergenic non-protein coding RNA 944 ncRNA Atac153_MAPQ30_peak_1319 chr11 113120678 113120678 + 2.53401 NA intron (NM_001076682, intron 17 of 19) intron (NM_001076682, intron 17 of 19) 23945 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA Atac153_MAPQ30_peak_5967 chr7 36513345 36513345 + 2.53401 NA Intergenic HERVL18-int|LTR|ERVL -83611 NM_001100425 23366 Hs.6224 NM_015314 HPRD:17197 KIAA0895 - KIAA0895 protein-coding Atac153_MAPQ30_peak_4860 chr3 136835593 136835593 + 2.53401 NA Intergenic LTR78|LTR|ERV1 158886 NM_144717 53833 Hs.61232 NM_144717 HPRD:14594 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor beta protein-coding Atac153_MAPQ30_peak_5423 chr5 139228676 139228676 + 2.53401 NA intron (NM_001184935, intron 7 of 7) intron (NM_001184935, intron 7 of 7) 53270 NM_032289 84249 Hs.21963 NM_032289 HPRD:15190 PSD2 - pleckstrin and Sec7 domain containing 2 protein-coding Atac153_MAPQ30_peak_5285 chr5 31614369 31614369 + 2.53401 NA Intergenic Intergenic 81996 NM_018356 55322 Hs.519246 NM_018356 HPRD:07740 C5orf22 - chromosome 5 open reading frame 22 protein-coding Atac153_MAPQ30_peak_5522 chr5 176289456 176289456 + 2.53401 NA intron (NM_133369, intron 1 of 14) MIRc|SINE|MIR 36877 NM_002115 3101 Hs.411695 NM_002115 HPRD:00806 HK3 HKIII|HXK3 hexokinase 3 (white cell) protein-coding Atac153_MAPQ30_peak_3599 chr2 86479271 86479271 + 2.53401 NA intron (NM_001164731, intron 3 of 5) intron (NM_001164731, intron 3 of 5) 52715 NM_016622 51318 Hs.433439 NM_016622 HPRD:14755 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding Atac153_MAPQ30_peak_3234 chr19 15061030 15061030 + 2.53401 NA exon (NM_005071, exon 9 of 9) exon (NM_005071, exon 9 of 9) 8729 NM_012377 26658 Hs.589620 NM_012377 HPRD:15072 OR7C2 CIT-HSP-87M17|OR19-18|OR7C3 olfactory receptor, family 7, subfamily C, member 2 protein-coding Atac153_MAPQ30_peak_1017 chr10 132980106 132980106 + 2.53401 NA intron (NM_174937, intron 4 of 11) intron (NM_174937, intron 4 of 11) 86625 NR_120623 101927489 NR_120623 ENSG00000230098 TCERG1L-AS1 - TCERG1L antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1062 chr11 6652664 6652664 + 2.53401 NA intron (NM_003737, intron 7 of 20) intron (NM_003737, intron 7 of 20) -11972 NM_000391 1200 Hs.523454 NM_000391 HPRD:06415 TPP1 CLN2|LPIC|SCAR7|TPP-1 tripeptidyl peptidase I protein-coding Atac153_MAPQ30_peak_2437 chr16 22644723 22644723 + 2.53401 NA Intergenic Intergenic -84880 NR_030385 693131 NR_030385 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA Atac153_MAPQ30_peak_4546 chr3 9050802 9050802 + 2.53401 NA intron (NM_001033117, intron 18 of 21) MLT1K|LTR|ERVL-MaLR -45643 NM_020165 56852 Hs.375684 NM_020165 HPRD:09242 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_6871 chr9 140777669 140777669 + 2.53401 NA intron (NR_121583, intron 1 of 3) intron (NR_121583, intron 1 of 3) 5428 NM_001243812 774 Hs.495522 NM_000718 HPRD:03005 CACNA1B BIII|CACNL1A5|CACNN|Cav2.2 calcium channel, voltage-dependent, N type, alpha 1B subunit protein-coding Atac153_MAPQ30_peak_6992 chrX 39714381 39714381 + 2.53401 NA Intergenic LTR16A2|LTR|ERVL 242338 NM_017745 54880 Hs.659681 NM_017745 HPRD:06458 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding Atac153_MAPQ30_peak_5658 chr6 36800201 36800201 + 2.53401 NA intron (NM_020939, intron 1 of 20) MLT1L|LTR|ERVL-MaLR 7019 NM_020939 57699 Hs.657869 NM_020939 HPRD:05018 CPNE5 COPN5|CPN5 copine V protein-coding Atac153_MAPQ30_peak_5581 chr6 6811792 6811792 + 2.53401 NA Intergenic Intergenic -188733 NR_026970 285780 Hs.655737 NM_173675 HPRD:08165 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6468 chr8 123563148 123563148 + 2.53401 NA Intergenic Intergenic -230753 NM_014943 22882 Hs.377090 NM_014943 HPRD:16458 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding Atac153_MAPQ30_peak_5105 chr4 77906035 77906035 + 2.53401 NA intron (NM_018243, intron 1 of 9) intron (NM_018243, intron 1 of 9) 35140 NM_018243 55752 Hs.128199 NM_018243 HPRD:08555 SEPT11 - septin 11 protein-coding Atac153_MAPQ30_peak_4406 chr22 32470021 32470021 + 2.53401 NA intron (NM_000343, intron 5 of 14) intron (NM_000343, intron 5 of 14) 14864 NM_001256314 6523 Hs.1964 NM_000343 HPRD:01668 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 (sodium/glucose cotransporter), member 1 protein-coding Atac153_MAPQ30_peak_235 chr1 44513310 44513310 + 2.53401 NA Intergenic Intergenic -16146 NM_001024845 6536 Hs.442590 NM_006934 HPRD:03010 SLC6A9 GLYT1 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 protein-coding Atac153_MAPQ30_peak_4261 chr21 36390909 36390909 + 2.53401 NA intron (NM_001754, intron 2 of 8) intron (NM_001754, intron 2 of 8) 20814 NR_026812 80215 Hs.672131 NM_025143 RUNX1-IT1 C21orf96 RUNX1 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4556 chr3 10752251 10752251 + 2.53401 NA Intergenic Intergenic 53626 NR_027102 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA Atac153_MAPQ30_peak_2126 chr15 31875211 31875211 + 2.53401 NA intron (NM_130901, intron 1 of 10) intron (NM_130901, intron 1 of 10) 72331 NM_130901 161725 Hs.355236 NM_130901 HPRD:12666 OTUD7A C15orf16|C16ORF15|CEZANNE2|OTUD7 OTU deubiquitinase 7A protein-coding Atac153_MAPQ30_peak_2022 chr14 90957464 90957464 + 2.53401 NA Intergenic Intergenic 35890 NR_033986 400238 Hs.131037 NR_033986 ENSG00000233208 LINC00642 - long intergenic non-protein coding RNA 642 ncRNA Atac153_MAPQ30_peak_519 chr1 212377030 212377030 + 2.53401 NA Intergenic Intergenic -81849 NM_006243 5525 Hs.744012 NM_006243 HPRD:03384 PPP2R5A B56A|PR61A protein phosphatase 2, regulatory subunit B', alpha protein-coding Atac153_MAPQ30_peak_3002 chr18 8218971 8218971 + 2.53401 NA intron (NM_001105244, intron 14 of 32) intron (NM_001105244, intron 14 of 32) 148061 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA Atac153_MAPQ30_peak_6795 chr9 124833517 124833517 + 2.53401 NA intron (NM_001139442, intron 1 of 8) intron (NM_001139442, intron 1 of 8) 22368 NM_001139442 158135 Hs.438937 NM_194252 HPRD:10047 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase-like family, member 11 protein-coding Atac153_MAPQ30_peak_1487 chr12 31874662 31874662 + 2.53401 NA intron (NM_001278412, intron 1 of 8) HERVL40-int|LTR|ERVL 7446 NM_001278411 196394 Hs.585084 NM_001113402 HPRD:14115 AMN1 - antagonist of mitotic exit network 1 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_2920 chr17 71787438 71787438 + 2.53401 NA intron (NR_040020, intron 3 of 6) LTR16C|LTR|ERVL 4477 NR_040020 400620 Hs.348644 NR_040020 ENSG00000234721 LOC400620 - uncharacterized LOC400620 ncRNA Atac153_MAPQ30_peak_3184 chr19 1986555 1986555 + 2.53401 NA exon (NM_017797, exon 9 of 9) exon (NM_017797, exon 9 of 9) 29147 NM_017797 55643 Hs.465543 NM_017797 HPRD:12252 BTBD2 - BTB (POZ) domain containing 2 protein-coding Atac153_MAPQ30_peak_485 chr1 203131418 203131418 + 2.53401 NA intron (NM_001048230, intron 2 of 2) intron (NM_001048230, intron 2 of 2) 13524 NM_004997 4608 Hs.927 NM_004997 HPRD:01186 MYBPH - myosin binding protein H protein-coding Atac153_MAPQ30_peak_4203 chr20 60149937 60149937 + 2.53401 NA intron (NM_001252338, intron 1 of 14) intron (NM_001252338, intron 1 of 14) -24880 NM_001252339 1002 Hs.473231 NM_001794 HPRD:04304 CDH4 CAD4|R-CAD|RCAD cadherin 4, type 1, R-cadherin (retinal) protein-coding Atac153_MAPQ30_peak_6396 chr8 63999897 63999897 + 2.53401 NA Intergenic L2a|LINE|L2 -1285 NM_000370 7274 Hs.69049 NM_000370 HPRD:02685 TTPA ATTP|AVED|TTP1|alphaTTP tocopherol (alpha) transfer protein protein-coding Atac153_MAPQ30_peak_6298 chr8 20330567 20330567 + 2.53401 NA Intergenic Intergenic 197283 NR_047509 100874051 Hs.385799 NR_047509 ENSG00000253733 LZTS1-AS1 - LZTS1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2368 chr16 5692088 5692088 + 2.53401 NA Intergenic Intergenic 9620 NR_107032 102465867 NR_107032 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA Atac153_MAPQ30_peak_4657 chr3 45405486 45405486 + 2.53401 NA Intergenic CT-rich|Low_complexity|Low_complexity -24589 NM_015340 23395 Hs.526975 NM_015340 HPRD:05178 LARS2 LEURS|PRLTS4 leucyl-tRNA synthetase 2, mitochondrial protein-coding Atac153_MAPQ30_peak_1434 chr12 3387302 3387302 + 2.53401 NA intron (NM_006675, intron 3 of 8) MIRc|SINE|MIR -103213 NM_001256536 56341 Hs.504530 NM_019854 HPRD:11029 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding Atac153_MAPQ30_peak_6045 chr7 68162759 68162759 + 2.53401 NA Intergenic Intergenic 677519 NR_120514 102723427 Hs.583491 NR_120514 LOC102723427 - uncharacterized LOC102723427 ncRNA Atac153_MAPQ30_peak_4287 chr21 41100380 41100380 + 2.53401 NA Intergenic MLT1C|LTR|ERVL-MaLR -16954 NM_001080444 150084 Hs.422120 NM_001080444 ENSG00000183067 IGSF5 GSF5|JAM4 immunoglobulin superfamily, member 5 protein-coding Atac153_MAPQ30_peak_150 chr1 26054794 26054794 + 2.53401 NA intron (NM_001289010, intron 2 of 11) intron (NM_001289010, intron 2 of 11) -71873 NM_020451 57190 Hs.323396 NM_020451 HPRD:05867 SEPN1 CFTD|MDRS1|RSMD1|RSS|SELN selenoprotein N, 1 protein-coding Atac153_MAPQ30_peak_138 chr1 23064169 23064169 + 2.53401 NA intron (NM_004442, intron 1 of 15) L2b|LINE|L2 18159 NR_039832 100616391 NR_039832 MIR4684 - microRNA 4684 ncRNA Atac153_MAPQ30_peak_220 chr1 41385026 41385026 + 2.53401 NA Intergenic Intergenic -57008 NM_133467 163732 Hs.355820 NM_133467 HPRD:06011 CITED4 - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 protein-coding Atac153_MAPQ30_peak_5312 chr5 56520787 56520787 + 2.53401 NA intron (NM_001127236, intron 2 of 10) intron (NM_001127236, intron 2 of 10) 10886 NM_001127236 65056 Hs.444279 NM_022913 HPRD:16333 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding Atac153_MAPQ30_peak_5232 chr5 4661449 4661449 + 2.53401 NA Intergenic Intergenic -112145 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LOC101929153 - uncharacterized LOC101929153 ncRNA Atac153_MAPQ30_peak_6002 chr7 50652426 50652426 + 2.53401 NA Intergenic Intergenic -19272 NM_001082971 1644 Hs.359698 NM_000790 HPRD:00145 DDC AADC dopa decarboxylase (aromatic L-amino acid decarboxylase) protein-coding Atac153_MAPQ30_peak_3397 chr2 7084802 7084802 + 2.53401 NA intron (NM_014746, intron 2 of 8) intron (NM_014746, intron 2 of 8) -25989 NR_033997 386597 Hs.559010 NR_033997 ENSG00000228203 RNF144A-AS1 - RNF144A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6444 chr8 102646593 102646593 + 2.53401 NA intron (NM_024915, intron 11 of 15) intron (NM_024915, intron 11 of 15) 141925 NM_024915 79977 Hs.661088 NM_024915 HPRD:10545 GRHL2 BOM|DFNA28|TFCP2L3 grainyhead-like 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_4661 chr3 46046488 46046488 + 2.53401 NA Intergenic MER50-int|LTR|ERV1 -9172 NM_024513 79443 Hs.200227 NM_024513 HPRD:06215 FYCO1 CATC2|CTRCT18|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding Atac153_MAPQ30_peak_5342 chr5 77135874 77135874 + 2.53401 NA Intergenic Intergenic -44606 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA Atac153_MAPQ30_peak_148 chr1 25229829 25229829 + 2.53401 NA intron (NM_004350, intron 4 of 4) intron (NM_004350, intron 4 of 4) 16078 NR_106789 102465437 NR_106789 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA Atac153_MAPQ30_peak_3102 chr18 48256023 48256023 + 2.53401 NA exon (NM_002747, exon 6 of 6) exon (NM_002747, exon 6 of 6) 90411 NM_001127176 83876 Hs.30495 NM_031939 HPRD:16276 MRO B29|C18orf3 maestro protein-coding Atac153_MAPQ30_peak_564 chr1 228520309 228520309 + 2.53401 NA intron (NM_001271223, intron 67 of 115) intron (NM_001271223, intron 67 of 115) 64501 NR_106800 102465444 NR_106800 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA Atac153_MAPQ30_peak_3905 chr2 233513282 233513282 + 2.53401 NA intron (NM_025202, intron 1 of 3) intron (NM_025202, intron 1 of 3) 15075 NM_025202 80303 Hs.516769 NM_025202 HPRD:13265 EFHD1 MST133|MSTP133|SWS2 EF-hand domain family, member D1 protein-coding Atac153_MAPQ30_peak_2105 chr15 26129664 26129664 + 2.53401 NA Intergenic Intergenic -17843 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LOC100128714 - uncharacterized LOC100128714 ncRNA Atac153_MAPQ30_peak_4050 chr20 25001890 25001890 + 2.53401 NA intron (NM_001252677, intron 6 of 11) intron (NM_001252677, intron 6 of 11) 11452 NM_001252676 84532 Hs.529353 NM_032501 HPRD:12413 ACSS1 ACAS2L|ACECS1|AceCS2L acyl-CoA synthetase short-chain family member 1 protein-coding Atac153_MAPQ30_peak_650 chr10 6014784 6014784 + 2.53401 NA intron (NM_001256765, intron 1 of 7) intron (NM_001256765, intron 1 of 7) 4790 NM_002189 3601 Hs.445124 NM_002189 HPRD:03045 IL15RA CD215 interleukin 15 receptor, alpha protein-coding Atac153_MAPQ30_peak_7132 chrX 97963542 97963542 + 2.53401 NA Intergenic Intergenic -1144008 NR_125391 10824 Hs.654372 NR_125391 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6556 chr8 143740370 143740370 + 2.53401 NA 3' UTR (NM_003724, exon 3 of 3) 3' UTR (NM_003724, exon 3 of 3) 11042 NM_003724 8629 Hs.535903 NM_003724 JRK JH8|jerky Jrk homolog (mouse) protein-coding Atac153_MAPQ30_peak_6413 chr8 85861400 85861400 + 2.53401 NA Intergenic Intergenic -157923 NM_033402 85444 Hs.193115 NM_033402 HPRD:11160 LRRCC1 CLERC|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding Atac153_MAPQ30_peak_2629 chr16 87686568 87686568 + 2.53401 NA intron (NR_073379, intron 2 of 5) intron (NR_073379, intron 2 of 5) 50075 NM_001271605 57338 Hs.592068 NM_020655 HPRD:05589 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding Atac153_MAPQ30_peak_6782 chr9 122319066 122319066 + 2.53401 NA Intergenic Intergenic -187327 NM_014618 1620 Hs.532316 NM_014618 HPRD:04181 BRINP1 DBC1|DBCCR1|FAM5A bone morphogenetic protein/retinoic acid inducible neural-specific 1 protein-coding Atac153_MAPQ30_peak_2990 chr18 5248774 5248774 + 2.53401 NA Intergenic Intergenic 10675 NR_015389 339290 Hs.643553 NR_015389 ENSG00000263753 LINC00667 - long intergenic non-protein coding RNA 667 ncRNA Atac153_MAPQ30_peak_3769 chr2 148504066 148504066 + 2.53401 NA Intergenic MSTD-int|LTR|ERVL-MaLR -98020 NM_001278580 92 Hs.470174 NM_001616 HPRD:00025 ACVR2A ACTRII|ACVR2 activin A receptor, type IIA protein-coding Atac153_MAPQ30_peak_7076 chrX 67911466 67911466 + 2.53401 NA intron (NM_014725, intron 2 of 13) intron (NM_014725, intron 2 of 13) -2016 NM_001142504 9754 Hs.95140 NM_014725 HPRD:06730 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR-related lipid transfer (START) domain containing 8 protein-coding Atac153_MAPQ30_peak_774 chr10 64877359 64877359 + 2.53401 NA Intergenic Intergenic -15648 NM_001282405 29982 Hs.449628 NM_030759 HPRD:11401 NRBF2 COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding Atac153_MAPQ30_peak_5469 chr5 156665260 156665260 + 2.53401 NA intron (NM_005546, intron 9 of 16) intron (NM_005546, intron 9 of 16) -27830 NM_001037333 26999 Hs.519702 NM_014376 HPRD:07556 CYFIP2 PIR121 cytoplasmic FMR1 interacting protein 2 protein-coding Atac153_MAPQ30_peak_2884 chr17 59412791 59412791 + 2.53401 NA intron (NM_017679, intron 22 of 23) intron (NM_017679, intron 22 of 23) 64176 NR_125749 103689912 Hs.410998 NR_125749 TBX2-AS1 - TBX2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6891 chrX 3224123 3224123 + 2.53401 NA Intergenic AluJo|SINE|Alu 34262 NR_038428 100129464 Hs.187816 NR_038428 ENSG00000228459 CXorf28 - chromosome X open reading frame 28 ncRNA Atac153_MAPQ30_peak_2619 chr16 86496493 86496493 + 2.53401 NA Intergenic Intergenic 45973 NR_036444 400550 Hs.448825 NR_033925 ENSG00000268388 FENDRR FOXF1-AS1|TCONS_00024240|lincFOXF1 FOXF1 adjacent non-coding developmental regulatory RNA ncRNA Atac153_MAPQ30_peak_3715 chr2 128389150 128389150 + 2.53401 NA intron (NM_001080527, intron 36 of 46) intron (NM_001080527, intron 36 of 46) -14289 NM_001161417 2840 Hs.46453 NM_005291 HPRD:04351 GPR17 - G protein-coupled receptor 17 protein-coding Atac153_MAPQ30_peak_783 chr10 71686294 71686294 + 2.53401 NA intron (NM_080800, intron 24 of 37) MER20|DNA|hAT-Charlie 124650 NM_080805 1305 Hs.695934 NM_005203 HPRD:00383 COL13A1 COLXIIIA1 collagen, type XIII, alpha 1 protein-coding Atac153_MAPQ30_peak_2397 chr16 11595977 11595977 + 2.53401 NA Intergenic Intergenic 36861 NR_110907 101927131 Hs.569654 NR_110907 ENSG00000262999 LOC101927131 - uncharacterized LOC101927131 ncRNA Atac153_MAPQ30_peak_4358 chr22 24431718 24431718 + 2.53401 NA intron (NM_001199281, intron 1 of 36) intron (NM_001199281, intron 1 of 36) 23898 NM_001199281 23523 Hs.517478 NM_012295 HPRD:10369 CABIN1 CAIN|PPP3IN calcineurin binding protein 1 protein-coding Atac153_MAPQ30_peak_380 chr1 154247811 154247811 + 2.53401 NA intron (NM_001018837, intron 5 of 6) intron (NM_001018837, intron 5 of 6) 2772 NM_001018837 10456 Hs.199625 NM_006118 HPRD:12075 HAX1 HCLSBP1|HS1BP1|SCN3 HCLS1 associated protein X-1 protein-coding Atac153_MAPQ30_peak_1793 chr13 35480776 35480776 + 2.53401 NA Intergenic Intergenic -35648 NM_015678 26960 Hs.491172 NM_015678 HPRD:05352 NBEA BCL8B|LYST2 neurobeachin protein-coding Atac153_MAPQ30_peak_1408 chr11 133519921 133519921 + 2.53401 NA Intergenic Intergenic -117518 NM_001012393 4978 Hs.4817 NM_002545 HPRD:07198 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule-like protein-coding Atac153_MAPQ30_peak_6879 chrX 624846 624846 + 2.53401 NA Intergenic Intergenic 39767 NM_006883 6473 Hs.105932 NM_000451 HPRD:02430 SHOX GCFX|PHOG|SHOXY|SS short stature homeobox protein-coding Atac153_MAPQ30_peak_2136 chr15 40871191 40871191 + 2.53401 NA Intergenic Intergenic 9699 NM_001286407 27079 Hs.173311 NM_152260 HPRD:12668 RPUSD2 C15orf19|C18B11 RNA pseudouridylate synthase domain containing 2 protein-coding Atac153_MAPQ30_peak_4663 chr3 46270530 46270530 + 2.53401 NA Intergenic Intergenic -13342 NM_178328 1232 Hs.506190 NM_001837 HPRD:03167 CCR3 CC-CKR-3|CD193|CKR3|CMKBR3 chemokine (C-C motif) receptor 3 protein-coding Atac153_MAPQ30_peak_1110 chr11 17473184 17473184 + 2.53401 NA intron (NM_001287174, intron 7 of 38) intron (NM_001287174, intron 7 of 38) 25208 NM_001287174 6833 Hs.54470 NM_000352 HPRD:02741 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP-binding cassette, sub-family C (CFTR/MRP), member 8 protein-coding Atac153_MAPQ30_peak_6137 chr7 131371798 131371798 + 2.53401 NA Intergenic L2a|LINE|L2 -130422 NM_001018111 5420 Hs.744213 NM_005397 HPRD:04025 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin-like protein-coding Atac153_MAPQ30_peak_4814 chr3 126212316 126212316 + 2.53401 NA intron (NM_144639, intron 15 of 19) L1MB3|LINE|L1 -17554 NM_025112 79364 Hs.440049 NM_025112 HPRD:14420 ZXDC ZXDL ZXD family zinc finger C protein-coding Atac153_MAPQ30_peak_619 chr1 245812707 245812707 + 2.53401 NA intron (NM_018012, intron 10 of 14) intron (NM_018012, intron 10 of 14) 494420 NM_018012 55083 Hs.368096 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding Atac153_MAPQ30_peak_41 chr1 6630753 6630753 + 2.53401 NA intron (NM_177540, intron 1 of 4) intron (NM_177540, intron 1 of 4) -9298 NM_001278648 3104 Hs.502330 NM_005341 HPRD:01316 ZBTB48 HKR3|ZNF855|pp9964 zinc finger and BTB domain containing 48 protein-coding Atac153_MAPQ30_peak_6251 chr8 2143067 2143067 + 2.53401 NA Intergenic Intergenic 118398 NR_106983 102465695 NR_106983 MIR7160 hsa-mir-7160 microRNA 7160 ncRNA Atac153_MAPQ30_peak_473 chr1 201467492 201467492 + 2.53401 NA intron (NM_001193570, intron 1 of 5) intron (NM_001193570, intron 1 of 5) -1791 NM_001193572 1465 Hs.108080 NM_004078 HPRD:00470 CSRP1 CRP|CRP1|CSRP|CYRP|D1S181E|HEL-141 cysteine and glycine-rich protein 1 protein-coding Atac153_MAPQ30_peak_3418 chr2 11903306 11903306 + 2.53401 NA intron (NM_145693, intron 1 of 19) intron (NM_145693, intron 1 of 19) 16584 NM_145693 23175 Hs.467740 NM_145693 HPRD:09271 LPIN1 PAP1 lipin 1 protein-coding Atac153_MAPQ30_peak_6011 chr7 51279181 51279181 + 2.53401 NA intron (NM_001287436, intron 2 of 13) MIR|SINE|MIR 105334 NM_015198 23242 Hs.99141 NM_015198 HPRD:10843 COBL - cordon-bleu WH2 repeat protein protein-coding Atac153_MAPQ30_peak_5050 chr4 25174231 25174231 + 2.53401 NA intron (NR_037934, intron 1 of 1) LTR38B|LTR|ERV1 11937 NR_037934 285540 Hs.732278 NR_037934 SEPSECS-AS1 - SEPSECS antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_2387 chr16 10217716 10217716 + 2.53401 NA intron (NM_000833, intron 3 of 13) MIR|SINE|MIR 58208 NM_001134408 2903 Hs.411472 NM_000833 HPRD:00698 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A protein-coding Atac153_MAPQ30_peak_6980 chrX 37853502 37853502 + 2.53401 NA Intergenic Intergenic 3432 NM_012274 25763 Hs.122959 NM_012274 ENSG00000187516 HYPM CXorf27|HIP17 huntingtin interacting protein M protein-coding Atac153_MAPQ30_peak_6108 chr7 107465446 107465446 + 2.53401 NA Intergenic MLT1D|LTR|ERVL-MaLR -21768 NM_000111 1811 Hs.1650 NM_000111 HPRD:00544 SLC26A3 CLD|DRA solute carrier family 26 (anion exchanger), member 3 protein-coding Atac153_MAPQ30_peak_350 chr1 117622989 117622989 + 2.53401 NA intron (NM_003594, intron 9 of 22) MLT1N2|LTR|ERVL-MaLR -14276 NR_030640 100126331 NR_030640 MIR942 MIRN942|hsa-mir-942 microRNA 942 ncRNA Atac153_MAPQ30_peak_1046 chr11 4206343 4206343 + 2.53401 NA Intergenic MIR|SINE|MIR -2039 NR_047550 100506082 Hs.445705 NR_047550 ENSG00000254480 LOC100506082 - uncharacterized LOC100506082 ncRNA Atac153_MAPQ30_peak_3754 chr2 134355867 134355867 + 2.53401 NA Intergenic Intergenic -29836 NM_207363 344148 Hs.537329 NM_207363 HPRD:16936 NCKAP5 ERIH1|ERIH2|NAP5 NCK-associated protein 5 protein-coding Atac153_MAPQ30_peak_2202 chr15 66531446 66531446 + 2.53401 NA intron (NM_032445, intron 1 of 22) MIR|SINE|MIR 14629 NM_032445 84465 Hs.712886 NM_032445 HPRD:14385 MEGF11 - multiple EGF-like-domains 11 protein-coding Atac153_MAPQ30_peak_161 chr1 30172723 30172723 + 2.53401 NA Intergenic L2a|LINE|L2 337736 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LOC101929406 - uncharacterized LOC101929406 ncRNA Atac153_MAPQ30_peak_1385 chr11 128425779 128425779 + 2.53401 NA intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 29742 NR_120581 101929517 Hs.562320 NR_120581 ENSG00000254588 LOC101929517 - uncharacterized LOC101929517 ncRNA Atac153_MAPQ30_peak_6593 chr9 16366040 16366040 + 2.53401 NA Intergenic L2|LINE|L2 -89729 NR_073471 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding Atac153_MAPQ30_peak_1055 chr11 6259445 6259445 + 2.53401 NA promoter-TSS (NM_001037329) promoter-TSS (NM_001037329) -877 NM_001037329 1262 Hs.434618 NM_001037329 HPRD:18724 CNGA4 CNCA2|CNG-4|CNG4|CNG5|CNGB2|OCNC2|OCNCBETA|OCNCb cyclic nucleotide gated channel alpha 4 protein-coding Atac153_MAPQ30_peak_860 chr10 93345393 93345393 + 2.53401 NA intron (NR_024467, intron 1 of 4) MLT1L|LTR|ERVL-MaLR 25824 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6042 chr7 67922889 67922889 + 2.53401 NA Intergenic L2a|LINE|L2 437649 NR_120514 102723427 Hs.583491 NR_120514 LOC102723427 - uncharacterized LOC102723427 ncRNA Atac153_MAPQ30_peak_4954 chr4 599873 599873 + 2.53401 NA Intergenic MER1B|DNA|hAT-Charlie -19490 NM_000283 5158 Hs.623810 NM_000283 HPRD:01571 PDE6B CSNB3|CSNBAD2|PDEB|RP40|rd1 phosphodiesterase 6B, cGMP-specific, rod, beta protein-coding Atac153_MAPQ30_peak_10 chr1 2012548 2012548 + 2.53401 NA intron (NM_001242874, intron 1 of 14) L1MC3|LINE|L1 7123 NM_001242874 5590 Hs.496255 NM_002744 HPRD:01504 PRKCZ PKC-ZETA|PKC2 protein kinase C, zeta protein-coding Atac153_MAPQ30_peak_3149 chr18 73617791 73617791 + 2.53401 NA Intergenic Intergenic -217162 NR_040034 339298 Hs.151215 NR_040034 ENSG00000263547 LOC339298 - uncharacterized LOC339298 ncRNA Atac153_MAPQ30_peak_3035 chr18 24225686 24225686 + 2.53401 NA intron (NM_001258222, intron 1 of 4) intron (NM_001258222, intron 1 of 4) -5378 NM_198991 284252 Hs.526630 NM_198991 HPRD:11059 KCTD1 C18orf5|SENS potassium channel tetramerization domain containing 1 protein-coding Atac153_MAPQ30_peak_2967 chr17 79583856 79583856 + 2.53401 NA intron (NM_017921, intron 3 of 16) L1MEd|LINE|L1 20282 NM_017921 55666 Hs.464333 NM_017921 HPRD:06975 NPLOC4 NPL4 nuclear protein localization 4 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5902 chr7 4015140 4015140 + 2.53401 NA intron (NM_152744, intron 13 of 44) L2c|LINE|L2 -154177 NM_001079653 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_1801 chr13 40988971 40988971 + 2.53401 NA intron (NR_024506, intron 5 of 5) intron (NR_024506, intron 5 of 5) 66172 NR_024507 646982 Hs.287664 NR_024505 LINC00598 TTL long intergenic non-protein coding RNA 598 ncRNA Atac153_MAPQ30_peak_4800 chr3 120026363 120026363 + 2.53401 NA Intergenic Intergenic 41823 NM_001099678 116064 Hs.518084 NM_001099678 ENSG00000163428 LRRC58 - leucine rich repeat containing 58 protein-coding Atac153_MAPQ30_peak_5424 chr5 139292056 139292056 + 2.53401 NA intron (NM_001184935, intron 1 of 7) intron (NM_001184935, intron 1 of 7) 116650 NM_032289 84249 Hs.21963 NM_032289 HPRD:15190 PSD2 - pleckstrin and Sec7 domain containing 2 protein-coding Atac153_MAPQ30_peak_6703 chr9 96288858 96288858 + 2.53401 NA intron (NM_001286722, intron 7 of 17) intron (NM_001286722, intron 7 of 17) -50051 NM_005392 5253 Hs.211441 NM_005392 HPRD:05071 PHF2 CENP-35|GRC5|JHDM1E PHD finger protein 2 protein-coding Atac153_MAPQ30_peak_6680 chr9 91327603 91327603 + 2.53401 NA Intergenic Intergenic 33217 NR_036252 100423015 NR_036252 miRBase:MI0015898 MIR4289 - microRNA 4289 ncRNA Atac153_MAPQ30_peak_6544 chr8 142625114 142625114 + 2.53401 NA Intergenic Intergenic -107784 NR_102364 389690 Hs.689547 NM_207414 HPRD:13480 MROH5 - maestro heat-like repeat family member 5 protein-coding Atac153_MAPQ30_peak_1257 chr11 71723515 71723515 + 2.53401 NA intron (NM_006185, intron 15 of 26) intron (NM_006185, intron 15 of 26) -1822 NR_104178 100128494 Hs.713607 NR_104178 LOC100128494 - uncharacterized LOC100128494 ncRNA Atac153_MAPQ30_peak_2212 chr15 67440050 67440050 + 2.53401 NA intron (NM_001145103, intron 1 of 8) intron (NM_001145103, intron 1 of 8) 9691 NM_001145103 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Atac153_MAPQ30_peak_7259 chrX 146156839 146156839 + 2.53401 NA Intergenic Tigger3d|DNA|TcMar-Tigger 155522 NR_030233 574511 NR_030233 miRBase:MI0003193 MIR506 MIRN506|hsa-mir-506 microRNA 506 ncRNA Atac153_MAPQ30_peak_1643 chr12 111767951 111767951 + 2.53401 NA intron (NM_015267, intron 18 of 21) intron (NM_015267, intron 18 of 21) 26005 NR_106818 102465455 NR_106818 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA Atac153_MAPQ30_peak_4332 chr22 17847303 17847303 + 2.53401 NA intron (NM_001290046, intron 1 of 18) AluSc|SINE|Alu 6464 NM_001290046 27443 Hs.231895 NM_031413 ENSG00000099954 CECR2 - cat eye syndrome chromosome region, candidate 2 protein-coding Atac153_MAPQ30_peak_6079 chr7 97683463 97683463 + 2.53401 NA Intergenic Intergenic -52734 NM_014916 22853 Hs.444179 NM_014916 HPRD:13994 LMTK2 AATYK2|BREK|KPI-2|KPI2|LMR2|PPP1R100|cprk lemur tyrosine kinase 2 protein-coding Atac153_MAPQ30_peak_4429 chr22 36685990 36685990 + 2.53401 NA intron (NM_002473, intron 31 of 40) MER58A|DNA|hAT-Charlie -3037 NR_106877 102465491 NR_106877 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA Atac153_MAPQ30_peak_1244 chr11 70072296 70072296 + 2.53401 NA Intergenic Intergenic 23027 NM_003824 8772 Hs.86131 NM_003824 HPRD:03909 FADD MORT1 Fas (TNFRSF6)-associated via death domain protein-coding Atac153_MAPQ30_peak_6165 chr7 138356699 138356699 + 2.53401 NA intron (NM_001139456, intron 3 of 14) intron (NM_001139456, intron 3 of 14) 7091 NM_001139456 136306 Hs.99414 NM_174959 HPRD:11235 SVOPL - SVOP-like protein-coding Atac153_MAPQ30_peak_3210 chr19 7704263 7704263 + 2.53401 NA intron (NM_001272034, intron 3 of 18) intron (NM_001272034, intron 3 of 18) 2276 NM_001127396 6813 Hs.515104 NM_006949 HPRD:03423 STXBP2 FHL5|Hunc18b|MUNC18-2|UNC18-2|UNC18B|pp10122 syntaxin binding protein 2 protein-coding Atac153_MAPQ30_peak_3834 chr2 202758880 202758880 + 2.53401 NA 3' UTR (NM_139158, exon 14 of 14) 3' UTR (NM_139158, exon 14 of 14) 87578 NM_001261436 65061 Hs.348711 NM_139158 HPRD:12449 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin-dependent kinase 15 protein-coding Atac153_MAPQ30_peak_1219 chr11 64702373 64702373 + 2.53401 NA TTS (NM_006244) TTS (NM_006244) 987 NM_130769 170589 Hs.436119 NM_130769 HPRD:17052 GPHA2 A2|GPA2|ZSIG51 glycoprotein hormone alpha 2 protein-coding Atac153_MAPQ30_peak_1465 chr12 18755490 18755490 + 2.53401 NA intron (NM_001288774, intron 30 of 32) L1PBa1|LINE|L1 135503 NM_033123 89869 Hs.97542 NM_033123 HPRD:06996 PLCZ1 NYD-SP27|PLC-zeta-1|PLCzeta phospholipase C, zeta 1 protein-coding Atac153_MAPQ30_peak_4279 chr21 40204234 40204234 + 2.53401 NA Intergenic MIRb|SINE|MIR -25229 NR_109926 101928398 Hs.122403 NR_109926 LOC101928398 - uncharacterized LOC101928398 ncRNA Atac153_MAPQ30_peak_194 chr1 36062675 36062675 + 2.53401 NA Intergenic L2|LINE|L2 23704 NM_178548 339488 Hs.567844 NM_178548 HPRD:18174 TFAP2E AP2E transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon) protein-coding Atac153_MAPQ30_peak_7210 chrX 130169815 130169815 + 2.53401 NA Intergenic Intergenic -22401 NM_001282607 158763 Hs.22905 NM_144967 HPRD:06547 ARHGAP36 - Rho GTPase activating protein 36 protein-coding Atac153_MAPQ30_peak_2070 chr14 101311703 101311703 + 2.53401 NA intron (NR_046473, intron 5 of 6) intron (NR_046473, intron 5 of 6) -7024 NR_030528 768222 NR_030528 miRBase:MI0005118 MIR770 MIRN770|hsa-mir-770 microRNA 770 ncRNA Atac153_MAPQ30_peak_5234 chr5 5386922 5386922 + 2.53401 NA Intergenic MLT1E3|LTR|ERVL-MaLR -35864 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongator complex ELL subunit 1 protein-coding Atac153_MAPQ30_peak_5603 chr6 15533886 15533886 + 2.53401 NA intron (NM_032122, intron 7 of 9) L2c|LINE|L2 129403 NR_036448 84062 Hs.571148 NM_032122 HPRD:06190 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding Atac153_MAPQ30_peak_841 chr10 86444055 86444055 + 2.53401 NA Intergenic Intergenic 259117 NM_001284242 54462 Hs.461988 NM_018999 HPRD:13832 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine-rich protein 2 protein-coding Atac153_MAPQ30_peak_4126 chr20 44534043 44534043 + 2.53401 NA intron (NM_001242921, intron 6 of 13) intron (NM_001242921, intron 6 of 13) 5590 NM_001242921 5360 Hs.439312 NM_006227 HPRD:01399 PLTP BPIFE|HDLCQ9 phospholipid transfer protein protein-coding Atac153_MAPQ30_peak_3992 chr20 6102491 6102491 + 2.53401 NA intron (NM_017671, intron 1 of 14) intron (NM_017671, intron 1 of 14) 1700 NM_017671 55612 Hs.472054 NM_017671 HPRD:06388 FERMT1 C20orf42|DTGCU2|KIND1|UNC112A|URP1 fermitin family member 1 protein-coding Atac153_MAPQ30_peak_4503 chr22 48027032 48027032 + 2.53401 NA promoter-TSS (NR_122046) promoter-TSS (NR_122046) 286 NR_033377 400932 Hs.561058 NM_001001693 HPRD:17000 LINC00898 - long intergenic non-protein coding RNA 898 ncRNA Atac153_MAPQ30_peak_4438 chr22 38028516 38028516 + 2.53401 NA exon (NM_001172688, exon 17 of 18) exon (NM_001172688, exon 17 of 18) -7168 NM_018957 23616 Hs.601143 NM_018957 HPRD:10227 SH3BP1 ARHGAP43 SH3-domain binding protein 1 protein-coding Atac153_MAPQ30_peak_2166 chr15 55659206 55659206 + 2.53401 NA intron (NM_020739, intron 6 of 7) intron (NM_020739, intron 6 of 7) 6026 NR_030358 693213 NR_030358 MIR628 MIRN628|hsa-mir-628 microRNA 628 ncRNA Atac153_MAPQ30_peak_5443 chr5 149025100 149025100 + 2.53401 NA Intergenic MIRc|SINE|MIR 63965 NM_001001669 389337 Hs.256206 NM_001001669 HPRD:13454 ARHGEF37 - Rho guanine nucleotide exchange factor (GEF) 37 protein-coding Atac153_MAPQ30_peak_4947 chr3 194707339 194707339 + 2.53401 NA Intergenic MLT1K|LTR|ERVL-MaLR -107978 NR_104188 100874528 Hs.581659 NR_104188 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3257 chr19 24256483 24256483 + 2.53401 NA intron (NM_001278677, intron 3 of 5) BSR/Beta|Satellite|Satellite -13479 NM_001278664 9534 Hs.434406 NM_004876 HPRD:05304 ZNF254 BMZF-5|HD-ZNF1|ZNF539|ZNF91L zinc finger protein 254 protein-coding Atac153_MAPQ30_peak_5204 chr4 188684442 188684442 + 2.53401 NA Intergenic ERVL-B4-int|LTR|ERVL -90647 NR_110436 100506272 Hs.508163 NR_110436 ENSG00000250590 LOC100506272 - uncharacterized LOC100506272 ncRNA Atac153_MAPQ30_peak_3069 chr18 43863232 43863232 + 2.53401 NA Intergenic Intergenic -50955 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|RNF111L2 ring finger protein 165 protein-coding Atac153_MAPQ30_peak_577 chr1 230444029 230444029 + 2.53401 NA Intergenic Intergenic 117645 NM_001258311 79605 Hs.520463 NM_024554 HPRD:10148 PGBD5 - piggyBac transposable element derived 5 protein-coding Atac153_MAPQ30_peak_6758 chr9 116346609 116346609 + 2.53401 NA exon (NM_001282922, exon 3 of 8) exon (NM_001282922, exon 3 of 8) 3452 NM_001282922 5998 Hs.494875 NM_017790 HPRD:03720 RGS3 C2PA|RGP3 regulator of G-protein signaling 3 protein-coding Atac153_MAPQ30_peak_114 chr1 18862797 18862797 + 2.53401 NA Intergenic Intergenic 55373 NM_152375 127707 Hs.406913 NM_152375 HPRD:08246 KLHDC7A - kelch domain containing 7A protein-coding Atac153_MAPQ30_peak_829 chr10 81179319 81179319 + 2.53401 NA intron (NM_153367, intron 2 of 3) intron (NM_153367, intron 2 of 3) 26064 NM_153367 219654 Hs.523080 NM_153367 HPRD:08299 ZCCHC24 C10orf56|Z3CXXC8 zinc finger, CCHC domain containing 24 protein-coding Atac153_MAPQ30_peak_276 chr1 58043838 58043838 + 2.53401 NA intron (NM_021080, intron 3 of 16) intron (NM_021080, intron 3 of 16) -282377 NR_104363 101926890 Hs.662207 NR_104362 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_5396 chr5 132180106 132180106 + 2.53401 NA Intergenic Intergenic -13516 NM_001172700 134549 Hs.519574 NM_133456 HPRD:10655 SHROOM1 APXL2 shroom family member 1 protein-coding Atac153_MAPQ30_peak_4296 chr21 42892871 42892871 + 2.53401 NA Intergenic MIRb|SINE|MIR -12786 NM_005656 7113 Hs.439309 NM_005656 HPRD:03637 TMPRSS2 PP9284|PRSS10 transmembrane protease, serine 2 protein-coding Atac153_MAPQ30_peak_7209 chrX 130134734 130134734 + 2.53401 NA Intergenic Intergenic -57482 NM_001282607 158763 Hs.22905 NM_144967 HPRD:06547 ARHGAP36 - Rho GTPase activating protein 36 protein-coding Atac153_MAPQ30_peak_1849 chr13 98731384 98731384 + 2.53401 NA Intergenic Intergenic -63432 NM_001286839 10160 Hs.403917 NM_005766 ENSG00000152767 FARP1 CDEP|FARP1-IT1|PLEKHC2|PPP1R75 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) protein-coding Atac153_MAPQ30_peak_1749 chr12 133108319 133108319 + 2.53401 NA intron (NM_001142641, intron 4 of 16) intron (NM_001142641, intron 4 of 16) 41162 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin-like 1 protein-coding Atac153_MAPQ30_peak_334 chr1 114442628 114442628 + 2.53401 NA exon (NM_001253852, exon 5 of 10) exon (NM_001253852, exon 5 of 10) 4897 NM_001253852 10717 Hs.515048 NM_006594 HPRD:06259 AP4B1 BETA-4|CPSQ5|SPG47 adaptor-related protein complex 4, beta 1 subunit protein-coding Atac153_MAPQ30_peak_2192 chr15 65031883 65031883 + 2.53401 NA TTS (NM_194272) TTS (NM_194272) 22831 NR_031674 100302184 NR_031674 MIR1272 MIRN1272|hsa-mir-1272 microRNA 1272 ncRNA Atac153_MAPQ30_peak_1109 chr11 17418451 17418451 + 2.53401 NA intron (NM_001287174, intron 33 of 38) intron (NM_001287174, intron 33 of 38) -7573 NM_001166290 3767 Hs.248141 NM_000525 HPRD:09022 KCNJ11 BIR|HHF2|IKATP|KIR6.2|PHHI|TNDM3 potassium inwardly-rectifying channel, subfamily J, member 11 protein-coding Atac153_MAPQ30_peak_213 chr1 40118759 40118759 + 2.53401 NA Intergenic Intergenic -13411 NM_014571 26508 Hs.472566 NM_014571 HPRD:16419 HEYL HESR3|HEY3|HRT3|bHLHb33 hes-related family bHLH transcription factor with YRPW motif-like protein-coding Atac153_MAPQ30_peak_2696 chr17 9125101 9125101 + 2.53401 NA intron (NM_004822, intron 6 of 6) intron (NM_004822, intron 6 of 6) -42666 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA Atac153_MAPQ30_peak_151 chr1 26324302 26324302 + 2.53401 NA intron (NM_000437, intron 1 of 10) intron (NM_000437, intron 1 of 10) 346 NM_000437 5051 Hs.477083 NM_000437 HPRD:03824 PAFAH2 HSD-PLA2 platelet-activating factor acetylhydrolase 2, 40kDa protein-coding Atac153_MAPQ30_peak_5403 chr5 133096204 133096204 + 2.53401 NA Intergenic Intergenic -147981 NM_015082 23105 Hs.483390 NM_015082 HPRD:17022 FSTL4 - follistatin-like 4 protein-coding Atac153_MAPQ30_peak_2977 chr17 80684893 80684893 + 2.53401 NA non-coding (NR_046408, exon 7 of 7) non-coding (NR_046408, exon 7 of 7) -8559 NM_022158 64122 Hs.151135 NM_022158 HPRD:16336 FN3K - fructosamine 3 kinase protein-coding Atac153_MAPQ30_peak_6183 chr7 144082519 144082519 + 2.53401 NA Intergenic Intergenic 24801 NM_001080413 135935 Hs.558628 NM_001080413 ENSG00000106410 NOBOX OG-2|OG2|OG2X|POF5|TCAG_12042 NOBOX oogenesis homeobox protein-coding Atac153_MAPQ30_peak_6350 chr8 39052244 39052244 + 2.53401 NA intron (NM_145004, intron 11 of 24) L1PREC2|LINE|L1 87194 NM_145004 203102 Hs.521545 NM_145004 HPRD:16475 ADAM32 - ADAM metallopeptidase domain 32 protein-coding Atac153_MAPQ30_peak_7124 chrX 90627452 90627452 + 2.53401 NA Intergenic L1PREC2|LINE|L1 -62145 NM_080832 140886 Hs.246590 NM_080832 HPRD:02324 PABPC5 PABP5 poly(A) binding protein, cytoplasmic 5 protein-coding Atac153_MAPQ30_peak_4170 chr20 54864396 54864396 + 2.53401 NA Intergenic Intergenic 40608 NM_019888 4159 Hs.248018 NM_019888 HPRD:01115 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding Atac153_MAPQ30_peak_5969 chr7 36950650 36950650 + 2.53401 NA intron (NM_001206480, intron 16 of 21) intron (NM_001206480, intron 16 of 21) 8387 NR_031604 100302113 NR_031604 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA Atac153_MAPQ30_peak_4146 chr20 48448021 48448021 + 2.53401 NA intron (NR_048538, intron 3 of 13) intron (NR_048538, intron 3 of 13) 18771 NM_001260491 23315 Hs.444202 NM_015266 HPRD:18062 SLC9A8 NHE-8|NHE8 solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 protein-coding Atac153_MAPQ30_peak_2066 chr14 100915229 100915229 + 2.53401 NA intron (NM_001161476, intron 2 of 6) L2c|LINE|L2 72396 NM_024515 79446 Hs.497600 NM_024515 HPRD:14649 WDR25 C14orf67 WD repeat domain 25 protein-coding Atac153_MAPQ30_peak_2170 chr15 58176571 58176571 + 2.53401 NA Intergenic Intergenic 129724 NM_170697 8854 Hs.643455 NM_003888 HPRD:04733 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family, member A2 protein-coding Atac153_MAPQ30_peak_6888 chrX 2823560 2823560 + 2.53401 NA 3' UTR (NM_001669, exon 10 of 10) 3' UTR (NM_001669, exon 10 of 10) 23856 NM_001669 414 Hs.528631 NM_001669 HPRD:02048 ARSD ASD arylsulfatase D protein-coding Atac153_MAPQ30_peak_5408 chr5 133782481 133782481 + 2.53401 NA Intergenic Intergenic -11743 NR_105044 102546229 NR_105044 LOC102546229 - uncharacterized LOC102546229 ncRNA Atac153_MAPQ30_peak_5151 chr4 140579454 140579454 + 2.53401 NA Intergenic Intergenic -7468 NM_001204368 4258 Hs.81874 NM_002413 HPRD:03436 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding Atac153_MAPQ30_peak_4137 chr20 47132014 47132014 + 2.53401 NA Intergenic D20S16|Satellite|Satellite 143360 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA Atac153_MAPQ30_peak_4923 chr3 183218992 183218992 + 2.53401 NA intron (NM_130446, intron 3 of 6) intron (NM_130446, intron 3 of 6) -47531 NR_046687 100874019 NR_046687 KLHL6-AS1 - KLHL6 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4262 chr21 36594683 36594683 + 2.53401 NA Intergenic Intergenic -173088 NM_001754 861 Hs.149261 NM_001754 HPRD:01043 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBFA2|EVI-1|PEBP2aB runt-related transcription factor 1 protein-coding Atac153_MAPQ30_peak_3665 chr2 109433260 109433260 + 2.53401 NA intron (NM_144978, intron 10 of 14) AluJr|SINE|Alu 30041 NM_144978 165055 Hs.731709 NM_144978 HPRD:08136 CCDC138 - coiled-coil domain containing 138 protein-coding Atac153_MAPQ30_peak_1488 chr12 32242766 32242766 + 2.53401 NA Intergenic Intergenic -17419 NM_001003398 636 Hs.505202 NM_001714 HPRD:03730 BICD1 BICD bicaudal D homolog 1 (Drosophila) protein-coding Atac153_MAPQ30_peak_5224 chr5 3204682 3204682 + 2.53401 NA Intergenic MLT1D|LTR|ERVL-MaLR 26733 NR_104617 102467074 Hs.575250 NR_104617 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA Atac153_MAPQ30_peak_156 chr1 27436174 27436174 + 2.53401 NA non-coding (NR_046474, exon 2 of 11) non-coding (NR_046474, exon 2 of 11) 45447 NR_046474 6548 Hs.91389 NM_003047 HPRD:00123 SLC9A1 APNH|NHE-1|NHE1|PPP1R143 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 protein-coding Atac153_MAPQ30_peak_5962 chr7 34728559 34728559 + 2.53401 NA intron (NM_001300934, intron 2 of 6) L1PB4|LINE|L1 30662 NM_207172 387129 Hs.652373 NM_207172 HPRD:10547 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding Atac153_MAPQ30_peak_1768 chr13 24523653 24523653 + 2.53401 NA promoter-TSS (NR_073430) promoter-TSS (NR_073430) -199 NR_073430 400110 Hs.744780 NM_207439 ANKRD20A19P - ankyrin repeat domain 20 family, member A19, pseudogene pseudo Atac153_MAPQ30_peak_7268 chrX 148583966 148583966 + 2.53401 NA intron (NR_104128, intron 3 of 8) intron (NR_104128, intron 3 of 8) 2918 NM_000202 3423 Hs.460960 NM_000202 HPRD:02402 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding Atac153_MAPQ30_peak_1158 chr11 44102822 44102822 + 2.53401 NA exon (NM_032592, exon 12 of 15) exon (NM_032592, exon 12 of 15) -14277 NM_001178083 2132 Hs.368404 NM_000401 HPRD:00599 EXT2 SOTV exostosin glycosyltransferase 2 protein-coding Atac153_MAPQ30_peak_4165 chr20 53351827 53351827 + 2.53401 NA Intergenic Intergenic 259570 NM_177959 55816 Hs.473133 NM_018431 HPRD:16317 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding Atac153_MAPQ30_peak_4280 chr21 40248339 40248339 + 2.53401 NA TTS (NR_120405) TTS (NR_120405) 18876 NR_109926 101928398 Hs.122403 NR_109926 LOC101928398 - uncharacterized LOC101928398 ncRNA Atac153_MAPQ30_peak_1012 chr10 132796340 132796340 + 2.53401 NA Intergenic MIR3|SINE|MIR -35409 NR_036180 100422867 NR_036180 miRBase:MI0015825 MIR378C - microRNA 378c ncRNA Atac153_MAPQ30_peak_1204 chr11 61134795 61134795 + 2.53401 NA intron (NR_028473, intron 4 of 5) intron (NR_028473, intron 4 of 5) -5040 NM_153611 220002 Hs.22546 NM_153611 HPRD:11316 CYB561A3 CYBASC3|LCYTB cytochrome b561 family, member A3 protein-coding Atac153_MAPQ30_peak_3469 chr2 27679424 27679424 + 2.53401 NA exon (NM_015662, exon 30 of 48) exon (NM_015662, exon 30 of 48) 14191 NM_173853 200634 Hs.59509 NM_173853 HPRD:17254 KRTCAP3 KCP3|MRV222|PRO9898 keratinocyte associated protein 3 protein-coding Atac153_MAPQ30_peak_5938 chr7 26558638 26558638 + 2.53401 NA Intergenic Intergenic 19806 NR_022006 9808 Hs.69749 NM_014769 ENSG00000122548 KIAA0087 - KIAA0087 ncRNA Atac153_MAPQ30_peak_6729 chr9 101541124 101541124 + 2.53401 NA intron (NM_173551, intron 6 of 14) intron (NM_173551, intron 6 of 14) 17670 NM_173551 203286 Hs.406890 NM_173551 HPRD:18012 ANKS6 ANKRD14|NPHP16|PKDR1|SAMD6 ankyrin repeat and sterile alpha motif domain containing 6 protein-coding Atac153_MAPQ30_peak_6878 chrX 492115 492115 + 2.53401 NA Intergenic Intergenic -92964 NM_000451 6473 Hs.105932 NM_000451 HPRD:02430 SHOX GCFX|PHOG|SHOXY|SS short stature homeobox protein-coding Atac153_MAPQ30_peak_5822 chr6 158140317 158140317 + 2.53401 NA Intergenic Intergenic -103886 NM_016224 51429 Hs.191213 NM_016224 HPRD:12072 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding Atac153_MAPQ30_peak_5941 chr7 27556005 27556005 + 2.53401 NA Intergenic Intergenic -99588 NR_122122 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA Atac153_MAPQ30_peak_971 chr10 127379214 127379214 + 2.53401 NA intron (NR_033848, intron 2 of 4) intron (NR_033848, intron 2 of 4) 7402 NR_033848 283038 Hs.144911 NR_033848 ENSG00000228021 LOC283038 - uncharacterized LOC283038 ncRNA Atac153_MAPQ30_peak_6496 chr8 133480188 133480188 + 2.53401 NA intron (NM_004519, intron 1 of 14) MIRc|SINE|MIR 12816 NM_004519 3786 Hs.374023 NM_004519 HPRD:09077 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel, KQT-like subfamily, member 3 protein-coding Atac153_MAPQ30_peak_3864 chr2 217575358 217575358 + 2.53401 NA Intergenic Intergenic -15086 NM_000599 3488 Hs.607212 NM_000599 HPRD:00901 IGFBP5 IBP5 insulin-like growth factor binding protein 5 protein-coding Atac153_MAPQ30_peak_5259 chr5 10532731 10532731 + 2.53401 NA Intergenic Intergenic -29891 NR_104606 101929412 Hs.508287 NR_104606 ENSG00000249396 LOC101929412 - uncharacterized LOC101929412 ncRNA Atac153_MAPQ30_peak_2909 chr17 66538677 66538677 + 2.53401 NA intron (NM_001243746, intron 7 of 11) intron (NM_001243746, intron 7 of 11) 15891 NR_027751 54757 Hs.268874 NM_017565 FAM20A AI1G|AIGFS|FP2747 family with sequence similarity 20, member A protein-coding Atac153_MAPQ30_peak_4848 chr3 134050421 134050421 + 2.53401 NA Intergenic Intergenic 36283 NR_106885 102466744 NR_106885 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA Atac153_MAPQ30_peak_6783 chr9 122364212 122364212 + 2.53401 NA Intergenic Intergenic -232473 NM_014618 1620 Hs.532316 NM_014618 HPRD:04181 BRINP1 DBC1|DBCCR1|FAM5A bone morphogenetic protein/retinoic acid inducible neural-specific 1 protein-coding Atac153_MAPQ30_peak_5924 chr7 23253913 23253913 + 2.53401 NA Intergenic MER50|LTR|ERV1 -32403 NM_002510 10457 Hs.190495 NM_002510 HPRD:05081 GPNMB HGFIN|NMB glycoprotein (transmembrane) nmb protein-coding Atac153_MAPQ30_peak_7288 chrX 153190278 153190278 + 2.53401 NA intron (NM_001164741, intron 1 of 22) intron (NM_001164741, intron 1 of 22) 1436 NM_001164741 393 Hs.701324 NM_001666 HPRD:02063 ARHGAP4 C1|RGC1|RhoGAP4|SrGAP4|p115 Rho GTPase activating protein 4 protein-coding Atac153_MAPQ30_peak_5620 chr6 26289984 26289984 + 2.53401 NA Intergenic HERVK3-int|LTR|ERVK -4257 NM_003543 8365 Hs.591790 NM_003543 HPRD:11919 HIST1H4H H4/h|H4FH histone cluster 1, H4h protein-coding Atac153_MAPQ30_peak_6895 chrX 4770916 4770916 + 2.53401 NA Intergenic Intergenic -219303 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA Atac153_MAPQ30_peak_4914 chr3 175707539 175707539 + 2.52509 NA Intergenic L1PA17|LINE|L1 -213418 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3884 chr2 223987686 223987686 + 2.52509 NA Intergenic Intergenic 71038 NM_080671 23704 Hs.348522 NM_080671 HPRD:09689 KCNE4 MIRP3 potassium voltage-gated channel, Isk-related family, member 4 protein-coding Atac153_MAPQ30_peak_2206 chr15 67213800 67213800 + 2.52509 NA Intergenic Intergenic -144395 NM_005902 4088 Hs.727986 NM_005902 HPRD:04380 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding Atac153_MAPQ30_peak_460 chr1 184450730 184450730 + 2.52509 NA intron (NM_030806, intron 2 of 5) intron (NM_030806, intron 2 of 5) 94580 NM_030806 81563 Hs.497159 NM_030806 HPRD:12721 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding Atac153_MAPQ30_peak_2555 chr16 70191153 70191153 + 2.50217 NA 3' UTR (NM_017990, exon 19 of 19) 3' UTR (NM_017990, exon 19 of 19) -16775 NM_173619 283971 Hs.556045 NM_173619 HPRD:14587 CLEC18C MRCL|MRCL3 C-type lectin domain family 18, member C protein-coding Atac153_MAPQ30_peak_2054 chr14 98307595 98307595 + 2.48904 NA Intergenic Intergenic 136866 NR_015430 388011 Hs.651477 NR_015430 ENSG00000246223 C14orf64 - chromosome 14 open reading frame 64 ncRNA Atac153_MAPQ30_peak_4775 chr3 98463112 98463112 + 2.48904 NA intron (NM_001271145, intron 1 of 9) MLT1C|LTR|ERVL-MaLR 11564 NM_006100 10402 Hs.148716 NM_006100 HPRD:06195 ST3GAL6 SIAT10|ST3GALVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding Atac153_MAPQ30_peak_2009 chr14 86019733 86019733 + 2.48904 NA intron (NM_013231, intron 1 of 1) MER30|DNA|hAT-Charlie 23245 NM_013231 23768 Hs.533710 NM_013231 HPRD:05312 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding Atac153_MAPQ30_peak_5096 chr4 62291701 62291701 + 2.48904 NA Intergenic HERVL18-int|LTR|ERVL -71138 NM_015236 23284 Hs.28391 NM_015236 HPRD:10055 LPHN3 CIRL3|LEC3 latrophilin 3 protein-coding Atac153_MAPQ30_peak_1251 chr11 70541767 70541767 + 2.48904 NA intron (NM_012309, intron 12 of 22) intron (NM_012309, intron 12 of 22) -33822 NR_110766 22941 Hs.268726 NM_012309 HPRD:04479 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding Atac153_MAPQ30_peak_6269 chr8 8410714 8410714 + 2.48904 NA Intergenic Intergenic -148952 NM_194284 137075 Hs.183617 NM_194284 HPRD:13069 CLDN23 CLDNL|hCG1646163 claudin 23 protein-coding Atac153_MAPQ30_peak_1719 chr12 129229473 129229473 + 2.48904 NA Intergenic Intergenic 79068 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 PHT1|PTR4 solute carrier family 15 (oligopeptide transporter), member 4 protein-coding Atac153_MAPQ30_peak_3553 chr2 64076936 64076936 + 2.46859 NA intron (NM_006759, intron 1 of 9) MIR3|SINE|MIR 7922 NM_006759 7360 Hs.516217 NM_006759 HPRD:08934 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding Atac153_MAPQ30_peak_3765 chr2 144452875 144452875 + 2.46859 NA intron (NM_018460, intron 12 of 13) intron (NM_018460, intron 12 of 13) -241759 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA Atac153_MAPQ30_peak_3450 chr2 23016328 23016328 + 2.46859 NA Intergenic Intergenic 256977 NR_110577 102723362 Hs.502887 NR_110577 LOC102723362 - uncharacterized LOC102723362 ncRNA Atac153_MAPQ30_peak_1414 chr11 134334949 134334949 + 2.46859 NA intron (NR_033852, intron 1 of 5) intron (NR_033852, intron 1 of 5) 28573 NR_033852 283177 Hs.504390 NR_033852 LOC283177 - uncharacterized LOC283177 ncRNA Atac153_MAPQ30_peak_1400 chr11 131837089 131837089 + 2.46859 NA intron (NM_001144059, intron 1 of 5) L2a|LINE|L2 56377 NM_016522 50863 Hs.504352 NM_016522 HPRD:06398 NTM HNT|IGLON2|NTRI neurotrimin protein-coding Atac153_MAPQ30_peak_4544 chr3 8851052 8851052 + 2.46859 NA Intergenic Intergenic -39752 NM_000916 5021 Hs.2820 NM_000916 HPRD:01328 OXTR OT-R oxytocin receptor protein-coding Atac153_MAPQ30_peak_6376 chr8 49811913 49811913 + 2.46859 NA Intergenic Intergenic 22086 NM_003068 6591 Hs.360174 NM_003068 HPRD:03689 SNAI2 SLUG|SLUGH1|SNAIL2|WS2D snail family zinc finger 2 protein-coding Atac153_MAPQ30_peak_535 chr1 218561370 218561370 + 2.46859 NA intron (NM_001135599, intron 2 of 7) intron (NM_001135599, intron 2 of 7) -42350 NR_046268 728463 Hs.568469 NR_046268 ENSG00000232480 TGFB2-AS1 - TGFB2 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_1301 chr11 103245453 103245453 + 2.46859 NA intron (NM_001080463, intron 84 of 89) THE1D-int|LTR|ERVL-MaLR 265293 NM_001080463 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein, cytoplasmic 2, heavy chain 1 protein-coding Atac153_MAPQ30_peak_2983 chr18 2680540 2680540 + 2.46859 NA intron (NM_015295, intron 5 of 47) L1M4|LINE|L1 24654 NM_015295 23347 Hs.8118 NM_015295 ENSG00000101596 SMCHD1 - structural maintenance of chromosomes flexible hinge domain containing 1 protein-coding Atac153_MAPQ30_peak_5110 chr4 78335086 78335086 + 2.46859 NA Intergenic LTR16D|LTR|ERVL -97821 NM_006419 10563 Hs.100431 NM_006419 HPRD:05513 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 chemokine (C-X-C motif) ligand 13 protein-coding Atac153_MAPQ30_peak_6117 chr7 124808455 124808455 + 2.44228 NA Intergenic Intergenic -16168 NR_110188 101928283 Hs.566650 NR_110188 ENSG00000237764 LOC101928283 - uncharacterized LOC101928283 ncRNA Atac153_MAPQ30_peak_5208 chr4 190660201 190660201 + 2.44157 NA Intergenic L2a|LINE|L2 79441 NR_121679 101928971 Hs.519164 NR_121679 ENSG00000250739 LINC01262 TCONS_l2_00021807 long intergenic non-protein coding RNA 1262 ncRNA Atac153_MAPQ30_peak_712 chr10 34880941 34880941 + 2.40919 NA intron (NM_001184791, intron 2 of 20) intron (NM_001184791, intron 2 of 20) 223312 NM_001184791 56288 Hs.131489 NM_019619 HPRD:05994 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding Atac153_MAPQ30_peak_6572 chr9 243457 243457 + 2.40919 NA intron (NM_203447, intron 1 of 47) intron (NM_203447, intron 1 of 47) -27564 NM_152569 157983 Hs.190877 NM_152569 HPRD:12971 C9orf66 - chromosome 9 open reading frame 66 protein-coding Atac153_MAPQ30_peak_4735 chr3 62768088 62768088 + 2.40919 NA intron (NM_183393, intron 1 of 26) L2a|LINE|L2 92976 NM_003716 8618 Hs.654933 NM_003716 HPRD:05236 CADPS CADPS1|CAPS|CAPS1 Ca++-dependent secretion activator protein-coding Atac153_MAPQ30_peak_5175 chr4 159768633 159768633 + 2.40919 NA intron (NM_020840, intron 7 of 16) L1M1|LINE|L1 78451 NM_020840 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding Atac153_MAPQ30_peak_6653 chr9 82289053 82289053 + 2.40919 NA intron (NR_104239, intron 9 of 20) MIR|SINE|MIR 102365 NR_104239 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|ESG|ESG4|GRG4 transducin-like enhancer of split 4 protein-coding Atac153_MAPQ30_peak_290 chr1 78395762 78395762 + 2.40919 NA intron (NM_001172309, intron 8 of 11) intron (NM_001172309, intron 8 of 11) -40538 NR_103535 374987 Hs.632414 NM_199343 HPRD:13542 NEXN-AS1 C1orf118 NEXN antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4740 chr3 65393793 65393793 + 2.35050 NA intron (NM_001033057, intron 12 of 22) intron (NM_001033057, intron 12 of 22) -485698 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1559 chr12 67272255 67272255 + 2.35050 NA Intergenic Intergenic -199330 NM_021150 23426 Hs.505946 NM_021150 ENSG00000155974 GRIP1 GRIP glutamate receptor interacting protein 1 protein-coding Atac153_MAPQ30_peak_5038 chr4 16338616 16338616 + 2.35050 NA Intergenic Charlie7|DNA|hAT-Charlie 110330 NR_027697 202020 Hs.445315 NM_152684 HPRD:08263 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_6371 chr8 48294137 48294137 + 2.35050 NA intron (NR_104581, intron 5 of 16) intron (NR_104581, intron 5 of 16) 120667 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffolding protein involved in DNA repair protein-coding Atac153_MAPQ30_peak_3898 chr2 231225582 231225582 + 2.35050 NA intron (NM_138402, intron 4 of 18) intron (NM_138402, intron 4 of 18) 33688 NM_138402 93349 Hs.589661 NM_138402 HPRD:14299 SP140L - SP140 nuclear body protein-like protein-coding Atac153_MAPQ30_peak_769 chr10 62508004 62508004 + 2.35050 NA Intergenic MER5A|DNA|hAT-Charlie -14720 NM_001204403 288 Hs.499725 NM_001149 HPRD:02715 ANK3 ANKYRIN-G|MRT37 ankyrin 3, node of Ranvier (ankyrin G) protein-coding Atac153_MAPQ30_peak_2960 chr17 78394190 78394190 + 2.33605 NA TTS (NR_039883) TTS (NR_039883) 972 NR_039883 100616359 NR_039883 MIR4730 - microRNA 4730 ncRNA Atac153_MAPQ30_peak_4998 chr4 7046790 7046790 + 2.33605 NA non-coding (NR_033828, exon 2 of 4) non-coding (NR_033828, exon 2 of 4) 1168 NR_033828 100129931 Hs.707753 NR_033828 LOC100129931 - uncharacterized LOC100129931 ncRNA Atac153_MAPQ30_peak_1918 chr14 52194540 52194540 + 2.29447 NA exon (NM_152330, exon 14 of 14) exon (NM_152330, exon 14 of 14) 10539 NM_001267047 122786 Hs.434914 NM_152330 HPRD:12646 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding Atac153_MAPQ30_peak_1915 chr14 48388747 48388747 + 2.29447 NA Intergenic L1PA10|LINE|L1 -124530 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA Atac153_MAPQ30_peak_1913 chr14 44591082 44591082 + 2.29447 NA Intergenic Intergenic 385417 NM_032135 84075 Hs.307086 NM_032135 HPRD:12638 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding Atac153_MAPQ30_peak_6781 chr9 121844394 121844394 + 2.29447 NA Intergenic Intergenic 287345 NM_014618 1620 Hs.532316 NM_014618 HPRD:04181 BRINP1 DBC1|DBCCR1|FAM5A bone morphogenetic protein/retinoic acid inducible neural-specific 1 protein-coding Atac153_MAPQ30_peak_4547 chr3 9489547 9489547 + 2.29447 NA exon (NM_001080517, exon 15 of 23) exon (NM_001080517, exon 15 of 23) 50163 NM_001292043 55209 Hs.288164 NM_018187 ENSG00000168137 SETD5 - SET domain containing 5 protein-coding Atac153_MAPQ30_peak_2699 chr17 9714360 9714360 + 2.27862 NA Intergenic MLT1I|LTR|ERVL-MaLR -15021 NM_004246 9340 Hs.248202 NM_004246 GLP2R - glucagon-like peptide 2 receptor protein-coding Atac153_MAPQ30_peak_1795 chr13 36841430 36841430 + 2.27862 NA intron (NM_001144984, intron 2 of 5) L1PB3|LINE|L1 30562 NM_001198910 100526761 Hs.124519 NM_001198910 ENSG00000120669 CCDC169-SOHLH2 C13orf38-SOHLH2 CCDC169-SOHLH2 readthrough protein-coding Atac153_MAPQ30_peak_3583 chr2 75234604 75234604 + 2.27862 NA Intergenic MLT1L|LTR|ERVL-MaLR 48829 NM_019896 56655 Hs.469060 NM_019896 POLE4 YHHQ1|p12 polymerase (DNA-directed), epsilon 4, accessory subunit protein-coding Atac153_MAPQ30_peak_768 chr10 61632797 61632797 + 2.27862 NA intron (NM_005436, intron 1 of 8) MER46C|DNA|TcMar-Tigger 33617 NM_005436 8030 Hs.591360 NM_005436 HPRD:09064 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding Atac153_MAPQ30_peak_4596 chr3 22983134 22983134 + 2.27862 NA Intergenic Intergenic -261650 NM_152653 7325 Hs.475688 NM_152653 UBE2E2 UBCH8 ubiquitin-conjugating enzyme E2E 2 protein-coding Atac153_MAPQ30_peak_4094 chr20 37921804 37921804 + 2.27862 NA Intergenic Intergenic -68413 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LOC339568 - uncharacterized LOC339568 ncRNA Atac153_MAPQ30_peak_2707 chr17 10728485 10728485 + 2.27862 NA 3' UTR (NM_001101387, exon 2 of 2) 3' UTR (NM_001101387, exon 2 of 2) 12933 NM_001101387 644139 Hs.553909 NM_001101387 ENSG00000233670 PIRT - phosphoinositide-interacting regulator of transient receptor potential channels protein-coding Atac153_MAPQ30_peak_858 chr10 92559406 92559406 + 2.27862 NA intron (NM_019860, intron 1 of 2) MamRep38|DNA|hAT 58265 NM_000872 3363 Hs.73739 NM_000872 HPRD:01639 HTR7 5-HT7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled protein-coding Atac153_MAPQ30_peak_7146 chrX 105669171 105669171 + 2.27862 NA Intergenic Intergenic -185989 NM_018015 55086 Hs.274267 NM_018015 HPRD:06513 CXorf57 - chromosome X open reading frame 57 protein-coding Atac153_MAPQ30_peak_1406 chr11 133390605 133390605 + 2.27862 NA intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) 11798 NM_001012393 4978 Hs.4817 NM_002545 HPRD:07198 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule-like protein-coding Atac153_MAPQ30_peak_244 chr1 46491369 46491369 + 2.27862 NA exon (NM_015112, exon 16 of 29) exon (NM_015112, exon 16 of 29) 107011 NM_003629 8503 Hs.655387 NM_003629 HPRD:05831 PIK3R3 p55|p55-GAMMA phosphoinositide-3-kinase, regulatory subunit 3 (gamma) protein-coding Atac153_MAPQ30_peak_1706 chr12 125911983 125911983 + 2.27862 NA intron (NM_052907, intron 3 of 8) MIR|SINE|MIR 100821 NM_052907 114795 Hs.524838 NM_052907 TMEM132B - transmembrane protein 132B protein-coding Atac153_MAPQ30_peak_583 chr1 231312224 231312224 + 2.27862 NA intron (NM_001300889, intron 3 of 11) intron (NM_001300889, intron 3 of 11) 11149 NM_001256615 149373 Hs.632505 NM_001256615 LOC149373 - uncharacterized LOC149373 protein-coding Atac153_MAPQ30_peak_5031 chr4 12658679 12658679 + 2.27862 NA Intergenic MLT1D|LTR|ERVL-MaLR 827310 NM_004249 9364 Hs.656060 NM_004249 HPRD:06699 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_6532 chr8 141161106 141161106 + 2.27862 NA intron (NM_031466, intron 17 of 22) L3|LINE|CR1 306755 NM_001160372 83696 Hs.654911 NM_031466 HPRD:18136 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|TRS120 trafficking protein particle complex 9 protein-coding Atac153_MAPQ30_peak_391 chr1 156604403 156604403 + 2.27862 NA Intergenic ERVL-E-int|LTR|ERVL -7337 NM_021948 63827 Hs.516904 NM_021948 HPRD:02644 BCAN BEHAB|CSPG7 brevican protein-coding Atac153_MAPQ30_peak_6489 chr8 131701316 131701316 + 2.27862 NA Intergenic Intergenic -245410 NM_018482 50807 Hs.655552 NM_018482 HPRD:05809 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding Atac153_MAPQ30_peak_2996 chr18 7037444 7037444 + 2.27862 NA intron (NM_005559, intron 12 of 62) intron (NM_005559, intron 12 of 62) 80369 NM_005559 284217 Hs.270364 NM_005559 HPRD:01033 LAMA1 LAMA|S-LAM-alpha laminin, alpha 1 protein-coding Atac153_MAPQ30_peak_1444 chr12 4881568 4881568 + 2.27862 NA intron (NM_017417, intron 10 of 10) intron (NM_017417, intron 10 of 10) -36774 NM_002235 3742 Hs.306190 NM_002235 HPRD:08884 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel, shaker-related subfamily, member 6 protein-coding Atac153_MAPQ30_peak_1270 chr11 75527710 75527710 + 2.27862 NA intron (NM_003369, intron 1 of 14) MIRb|SINE|MIR 1498 NM_003369 7405 Hs.202470 NM_003369 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding Atac153_MAPQ30_peak_1968 chr14 69398124 69398124 + 2.27862 NA intron (NM_001102, intron 1 of 20) L3|LINE|CR1 47959 NM_001130004 87 Hs.509765 NM_001102 HPRD:00020 ACTN1 BDPLT15 actinin, alpha 1 protein-coding Atac153_MAPQ30_peak_2728 chr17 17425692 17425692 + 2.27862 NA exon (NM_007169, exon 3 of 7) exon (NM_007169, exon 3 of 7) -25983 NM_001199989 51655 Hs.25829 NM_016084 HPRD:08958 RASD1 AGS1|DEXRAS1|MGC:26290 RAS, dexamethasone-induced 1 protein-coding Atac153_MAPQ30_peak_6417 chr8 94629354 94629354 + 2.27862 NA intron (NR_033858, intron 5 of 10) L1MB3|LINE|L1 83307 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA Atac153_MAPQ30_peak_918 chr10 115390553 115390553 + 2.27862 NA intron (NM_198060, intron 18 of 41) intron (NM_198060, intron 18 of 41) 33276 NM_198060 4892 Hs.268788 NM_006175 HPRD:04189 NRAP N-RAP nebulin-related anchoring protein protein-coding Atac153_MAPQ30_peak_3963 chr2 242379690 242379690 + 2.27862 NA intron (NM_001282983, intron 12 of 17) intron (NM_001282983, intron 12 of 17) 68085 NM_001271978 10494 Hs.516807 NM_006374 HPRD:03770 STK25 SOK1|YSK1 serine/threonine kinase 25 protein-coding Atac153_MAPQ30_peak_4944 chr3 193505046 193505046 + 2.27862 NA Intergenic Intergenic -159925 NR_046634 100873941 Hs.679364 NR_046634 ENSG00000224855 OPA1-AS1 - OPA1 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_862 chr10 95882142 95882142 + 2.27862 NA intron (NM_001165979, intron 1 of 31) intron (NM_001165979, intron 1 of 31) -13591 NR_120616 101927049 Hs.144492 NR_120615 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA Atac153_MAPQ30_peak_6287 chr8 11619732 11619732 + 2.27862 NA non-coding (NR_103552, exon 1 of 1) non-coding (NR_103552, exon 1 of 1) 967 NR_103552 606553 Hs.545529 NM_001031839 C8orf49 G4DM chromosome 8 open reading frame 49 ncRNA Atac153_MAPQ30_peak_3195 chr19 3857602 3857602 + 2.27862 NA intron (NR_027149, intron 1 of 2) AluSz6|SINE|Alu 11425 NM_001145640 23217 Hs.65750 NM_015174 ENSG00000105278 ZFR2 KIAA1086 zinc finger RNA binding protein 2 protein-coding Atac153_MAPQ30_peak_1172 chr11 45533866 45533866 + 2.27862 NA Intergenic MIRb|SINE|MIR 140918 NR_122071 399886 Hs.559970 NR_122071 HPRD:13453 LOC399886 - uncharacterized LOC399886 ncRNA Atac153_MAPQ30_peak_5696 chr6 44685382 44685382 + 2.27862 NA Intergenic L2|LINE|L2 282004 NR_039785 100616352 NR_039785 MIR4642 - microRNA 4642 ncRNA Atac153_MAPQ30_peak_1596 chr12 101348642 101348642 + 2.27862 NA intron (NM_001286616, intron 4 of 26) intron (NM_001286616, intron 4 of 26) 53218 NM_001286616 121601 Hs.58785 NM_178826 HPRD:15527 ANO4 TMEM16D anoctamin 4 protein-coding Atac153_MAPQ30_peak_3007 chr18 8798189 8798189 + 2.27862 NA exon (NM_015210, exon 10 of 17) exon (NM_015210, exon 10 of 17) 80820 NM_015210 23255 Hs.707920 NM_015210 HPRD:11110 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding Atac153_MAPQ30_peak_2241 chr15 74541125 74541125 + 2.27862 NA intron (NM_025055, intron 2 of 18) intron (NM_025055, intron 2 of 18) 12495 NM_025055 80125 Hs.383206 NM_025055 HPRD:09959 CCDC33 CT61 coiled-coil domain containing 33 protein-coding Atac153_MAPQ30_peak_5900 chr7 3313262 3313262 + 2.27862 NA Intergenic Intergenic -27818 NM_152744 221935 Hs.653013 NM_152744 HPRD:07388 SDK1 - sidekick cell adhesion molecule 1 protein-coding Atac153_MAPQ30_peak_281 chr1 60212129 60212129 + 2.27862 NA intron (NM_001113411, intron 15 of 16) MIRb|SINE|MIR -13161 NR_039861 100616409 NR_039861 miRBase:MI0017345 MIR4711 - microRNA 4711 ncRNA Atac153_MAPQ30_peak_3423 chr2 12788741 12788741 + 2.27862 NA Intergenic L2c|LINE|L2 -68257 NR_027303 28951 Hs.467751 NM_021643 HPRD:18224 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding Atac153_MAPQ30_peak_4980 chr4 3749322 3749322 + 2.27862 NA Intergenic Intergenic -18974 NM_000683 152 Hs.123022 NM_000683 HPRD:00085 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding Atac153_MAPQ30_peak_1685 chr12 123406563 123406563 + 2.27862 NA intron (NM_001243014, intron 11 of 11) intron (NM_001243014, intron 11 of 11) -25851 NM_024667 79720 Hs.507162 NM_024667 HPRD:07794 VPS37B - vacuolar protein sorting 37 homolog B (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_6111 chr7 113014732 113014732 + 2.27862 NA Intergenic Intergenic -256095 NR_024412 401397 Hs.117929 NR_015442 ENSG00000214194 LINC00998 - long intergenic non-protein coding RNA 998 ncRNA Atac153_MAPQ30_peak_6811 chr9 129787507 129787507 + 2.27862 NA intron (NM_014636, intron 4 of 18) L1ME1|LINE|L1 63003 NM_001190728 9649 Hs.432842 NM_014636 HPRD:11479 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding Atac153_MAPQ30_peak_2318 chr15 92552982 92552982 + 2.27862 NA intron (NM_013272, intron 2 of 9) intron (NM_013272, intron 2 of 9) 156044 NM_013272 28232 Hs.311187 NM_013272 HPRD:07502 SLCO3A1 OATP-D|OATP3A1|OATPD|SLC21A11 solute carrier organic anion transporter family, member 3A1 protein-coding Atac153_MAPQ30_peak_4881 chr3 140291596 140291596 + 2.27862 NA Intergenic MER5A|DNA|hAT-Charlie -63965 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3776 chr2 158329754 158329754 + 2.27862 NA Intergenic L2a|LINE|L2 -29150 NM_004288 9595 Hs.270 NM_004288 HPRD:09192 CYTIP B3-1|CASP|CYBR|CYTHIP|HE|PSCDBP cytohesin 1 interacting protein protein-coding Atac153_MAPQ30_peak_1185 chr11 47257066 47257066 + 2.27862 NA intron (NM_000107, intron 7 of 9) intron (NM_000107, intron 7 of 9) -12785 NM_001251934 10062 Hs.438863 NM_005693 HPRD:07211 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1, group H, member 3 protein-coding Atac153_MAPQ30_peak_2382 chr16 8804981 8804981 + 2.27862 NA intron (NM_020686, intron 1 of 15) L1MC4a|LINE|L1 -1845 NM_000663 18 Hs.336768 NM_000663 HPRD:00661 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding Atac153_MAPQ30_peak_5823 chr6 158308987 158308987 + 2.27862 NA intron (NM_016224, intron 4 of 17) intron (NM_016224, intron 4 of 17) 64784 NM_016224 51429 Hs.191213 NM_016224 HPRD:12072 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding Atac153_MAPQ30_peak_232 chr1 44062841 44062841 + 2.27862 NA intron (NM_130440, intron 11 of 32) intron (NM_130440, intron 11 of 32) -52956 NM_014663 9682 Hs.155983 NM_014663 HPRD:17168 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine (K)-specific demethylase 4A protein-coding Atac153_MAPQ30_peak_4896 chr3 157333288 157333288 + 2.27862 NA Intergenic Intergenic 72155 NM_001130002 152078 Hs.259046 NM_001099777 ENSG00000174899 C3orf55 - chromosome 3 open reading frame 55 protein-coding Atac153_MAPQ30_peak_4329 chr21 47891090 47891090 + 2.27862 NA intron (NM_001146114, intron 1 of 27) AluJr|SINE|Alu 8706 NR_046400 100862692 Hs.737163 NR_046400 DIP2A-IT1 - DIP2A intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_262 chr1 53689024 53689024 + 2.27862 NA Intergenic L1M1|LINE|L1 -2735 NM_017887 54987 Hs.525391 NM_017887 HPRD:07929 C1orf123 - chromosome 1 open reading frame 123 protein-coding Atac153_MAPQ30_peak_952 chr10 125439555 125439555 + 2.27862 NA intron (NM_153442, intron 2 of 2) intron (NM_153442, intron 2 of 2) 13684 NM_153442 2849 Hs.12751 NM_153442 GPR26 - G protein-coupled receptor 26 protein-coding Atac153_MAPQ30_peak_5851 chr6 167739399 167739399 + 2.27862 NA intron (NM_031949, intron 1 of 2) intron (NM_031949, intron 1 of 2) 825 NM_031949 83887 Hs.520554 NM_031949 TTLL2 C6orf104|NYD-TSPG|dJ366N23.3 tubulin tyrosine ligase-like family, member 2 protein-coding Atac153_MAPQ30_peak_6643 chr9 78818169 78818169 + 2.27862 NA intron (NM_001190482, intron 20 of 36) intron (NM_001190482, intron 20 of 36) 191275 NM_018339 55312 Hs.37558 NM_018339 HPRD:17969 RFK RIFK riboflavin kinase protein-coding Atac153_MAPQ30_peak_199 chr1 37090176 37090176 + 2.27862 NA Intergenic MER5A|DNA|hAT-Charlie -141261 NM_156039 1441 Hs.524517 NM_000760 HPRD:00737 CSF3R CD114|GCSFR colony stimulating factor 3 receptor (granulocyte) protein-coding Atac153_MAPQ30_peak_6748 chr9 112204946 112204946 + 2.27862 NA intron (NM_002829, intron 7 of 25) intron (NM_002829, intron 7 of 25) 8718 NM_001145369 5774 Hs.436429 NM_002829 HPRD:06767 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase, non-receptor type 3 protein-coding Atac153_MAPQ30_peak_4420 chr22 35553495 35553495 + 2.27862 NA Intergenic L2b|LINE|L2 91365 NM_001008494 91464 Hs.567637 NM_001008494 HPRD:17957 ISX Pix-1|RAXLX intestine-specific homeobox protein-coding Atac153_MAPQ30_peak_6510 chr8 136678193 136678193 + 2.27862 NA Intergenic Intergenic 208477 NM_006558 10656 Hs.444558 NM_006558 HPRD:10007 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH domain containing, RNA binding, signal transduction associated 3 protein-coding Atac153_MAPQ30_peak_4763 chr3 73277830 73277830 + 2.27862 NA Intergenic Intergenic 167020 NM_018029 55096 Hs.658858 NM_018029 HPRD:07654 EBLN2 EBLN-2 endogenous Bornavirus-like nucleoprotein 2 protein-coding Atac153_MAPQ30_peak_2130 chr15 38421972 38421972 + 2.27862 NA Intergenic Intergenic 89378 NR_120330 101928227 Hs.602381 NR_120330 LOC101928227 - uncharacterized LOC101928227 ncRNA Atac153_MAPQ30_peak_4787 chr3 112076349 112076349 + 2.27862 NA intron (NM_001004196, intron 6 of 6) intron (NM_001004196, intron 6 of 6) 24433 NM_005944 4345 Hs.79015 NM_005944 ENSG00000091972 CD200 MOX1|MOX2|MRC|OX-2 CD200 molecule protein-coding Atac153_MAPQ30_peak_1910 chr14 38180915 38180915 + 2.27862 NA Intergenic Intergenic -116590 NM_004496 3169 Hs.163484 NM_004496 HPRD:03801 FOXA1 HNF3A|TCF3A forkhead box A1 protein-coding Atac153_MAPQ30_peak_4874 chr3 139044825 139044825 + 2.27862 NA Intergenic MIRb|SINE|MIR -18036 NM_020191 56945 Hs.745001 NM_020191 HPRD:10430 MRPS22 C3orf5|COXPD5|GIBT|MRP-S22|RPMS22 mitochondrial ribosomal protein S22 protein-coding Atac153_MAPQ30_peak_509 chr1 207122850 207122850 + 2.27862 NA Intergenic Intergenic -3039 NM_002644 5284 Hs.497589 NM_002644 HPRD:01436 PIGR - polymeric immunoglobulin receptor protein-coding Atac153_MAPQ30_peak_5914 chr7 9146491 9146491 + 2.27862 NA Intergenic L1M1|LINE|L1 -527409 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian clock 3 pseudogene pseudo Atac153_MAPQ30_peak_6189 chr7 149520768 149520768 + 2.27862 NA intron (NM_198455, intron 92 of 109) L2b|LINE|L2 -14741 NM_001099220 643641 Hs.731923 NM_001099220 ENSG00000106479 ZNF862 - zinc finger protein 862 protein-coding Atac153_MAPQ30_peak_6377 chr8 50570024 50570024 + 2.27862 NA Intergenic AluJb|SINE|Alu -252325 NM_001287813 54212 Hs.584914 NM_018967 HPRD:16373 SNTG1 G1SYN|SYN4 syntrophin, gamma 1 protein-coding Atac153_MAPQ30_peak_4859 chr3 136783853 136783853 + 2.27862 NA Intergenic Intergenic 107146 NM_144717 53833 Hs.61232 NM_144717 HPRD:14594 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor beta protein-coding Atac153_MAPQ30_peak_3867 chr2 217862183 217862183 + 2.27862 NA Intergenic Intergenic -137401 NM_003284 7141 Hs.3017 NM_003284 HPRD:01830 TNP1 TP1 transition protein 1 (during histone to protamine replacement) protein-coding Atac153_MAPQ30_peak_5388 chr5 126929236 126929236 + 2.27862 NA Intergenic Intergenic -55477 NM_001048252 613212 Hs.66194 NM_001048252 ENSG00000205279 CTXN3 KABE cortexin 3 protein-coding Atac153_MAPQ30_peak_30 chr1 5399956 5399956 + 2.27862 NA Intergenic MLT1C|LTR|ERVL-MaLR -224175 NR_039612 100616489 NR_039612 miRBase:MI0016753 MIR4417 - microRNA 4417 ncRNA Atac153_MAPQ30_peak_4267 chr21 38115079 38115079 + 2.27862 NA intron (NM_009586, intron 8 of 9) intron (NM_009586, intron 8 of 9) 43088 NM_009586 6493 Hs.146186 NM_005069 HPRD:02935 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 single-minded family bHLH transcription factor 2 protein-coding Atac153_MAPQ30_peak_5354 chr5 87396213 87396213 + 2.27862 NA Intergenic HAL1|LINE|L1 168483 NM_001289008 153396 Hs.379972 NM_153354 HPRD:14555 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding Atac153_MAPQ30_peak_2124 chr15 31440907 31440907 + 2.27862 NA intron (NM_001252020, intron 1 of 26) intron (NM_001252020, intron 1 of 26) 12569 NM_001252020 4308 Hs.155942 NM_002420 HPRD:04656 TRPM1 CSNB1C|LTRPC1|MLSN1 transient receptor potential cation channel, subfamily M, member 1 protein-coding Atac153_MAPQ30_peak_6651 chr9 81952022 81952022 + 2.27862 NA Intergenic L1PA15-16|LINE|L1 -191441 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA Atac153_MAPQ30_peak_3324 chr19 47113076 47113076 + 2.27862 NA 3' UTR (NM_005184, exon 6 of 6) 3' UTR (NM_005184, exon 6 of 6) 8564 NM_005184 808 Hs.515487 NM_005184 HPRD:00243 CALM3 HEL-S-72|PHKD|PHKD3 calmodulin 3 (phosphorylase kinase, delta) protein-coding Atac153_MAPQ30_peak_6178 chr7 142722868 142722868 + 2.27862 NA TTS (NM_001001658) TTS (NM_001001658) 1351 NM_001001658 135924 Hs.553594 NM_001001658 HPRD:15088 OR9A2 - olfactory receptor, family 9, subfamily A, member 2 protein-coding Atac153_MAPQ30_peak_1335 chr11 116232404 116232404 + 2.27862 NA Intergenic Intergenic 411310 NM_032725 84811 Hs.437341 NM_032725 HPRD:11307 BUD13 Cwc26|fSAP71 BUD13 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_4907 chr3 170356188 170356188 + 2.27862 NA Intergenic Intergenic -52325 NM_020949 57709 Hs.596660 NM_020949 HPRD:17222 SLC7A14 PPP1R142 solute carrier family 7, member 14 protein-coding Atac153_MAPQ30_peak_1069 chr11 8062595 8062595 + 2.27862 NA intron (NM_003320, intron 2 of 12) intron (NM_003320, intron 2 of 12) 2415 NM_003320 7275 Hs.568986 NM_003320 HPRD:03121 TUB rd5 tubby bipartite transcription factor protein-coding Atac153_MAPQ30_peak_3957 chr2 241187028 241187028 + 2.27862 NA Intergenic Intergenic -106955 NM_148961 150677 Hs.148586 NM_148961 HPRD:09714 OTOS OTOSP otospiralin protein-coding Atac153_MAPQ30_peak_3955 chr2 241013928 241013928 + 2.27862 NA Intergenic MLT1J|LTR|ERVL-MaLR -28439 NM_173351 150681 Hs.626616 NM_173351 HPRD:17772 OR6B3 OR6B3P|OR6B3Q olfactory receptor, family 6, subfamily B, member 3 protein-coding Atac153_MAPQ30_peak_2018 chr14 89654831 89654831 + 2.27862 NA intron (NM_005197, intron 4 of 5) intron (NM_005197, intron 4 of 5) 228623 NM_005197 1112 Hs.434286 NM_005197 HPRD:07533 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding Atac153_MAPQ30_peak_5273 chr5 14492687 14492687 + 2.27862 NA exon (NM_007118, exon 49 of 57) exon (NM_007118, exon 49 of 57) -89204 NM_019018 54491 Hs.155085 NM_019018 FAM105A NET20 family with sequence similarity 105, member A protein-coding Atac153_MAPQ30_peak_5058 chr4 32330122 32330122 + 2.27862 NA Intergenic MER83C|LTR|ERV1 1608085 NM_032457 5099 Hs.479439 NM_002589 HPRD:04288 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding Atac153_MAPQ30_peak_5100 chr4 71667105 71667105 + 2.27862 NA intron (NM_001037442, intron 15 of 17) L1MC1|LINE|L1 38115 NM_001098477 2926 Hs.309763 NM_002092 HPRD:07276 GRSF1 - G-rich RNA sequence binding factor 1 protein-coding Atac153_MAPQ30_peak_3976 chr20 2319144 2319144 + 2.27862 NA intron (NM_003245, intron 11 of 12) intron (NM_003245, intron 11 of 12) -42410 NM_198994 343641 Hs.452039 NM_198994 HPRD:15495 TGM6 SCA35|TG6|TGM3L|TGY|dJ734P14.3 transglutaminase 6 protein-coding Atac153_MAPQ30_peak_3400 chr2 8354620 8354620 + 2.27862 NA intron (NR_034135, intron 7 of 8) intron (NR_034135, intron 7 of 8) 113929 NR_034135 339789 Hs.565619 NM_207358 HPRD:14171 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA Atac153_MAPQ30_peak_5606 chr6 18312322 18312322 + 2.27862 NA Intergenic Intergenic -47523 NM_001134709 7913 Hs.484813 NM_003472 HPRD:00503 DEK D6S231E DEK proto-oncogene protein-coding Atac153_MAPQ30_peak_3815 chr2 187831504 187831504 + 2.27862 NA Intergenic Intergenic -117607 NM_182521 151112 Hs.375054 NM_182521 HPRD:15902 ZSWIM2 MEX|ZZZ2 zinc finger, SWIM-type containing 2 protein-coding Atac153_MAPQ30_peak_4333 chr22 18262585 18262585 + 2.27862 NA TTS (NR_103718) TTS (NR_103718) 2529 NR_103718 200298 Hs.517397 NR_103718 ENSG00000269220 LINC00528 C22orf37 long intergenic non-protein coding RNA 528 ncRNA Atac153_MAPQ30_peak_6663 chr9 85539892 85539892 + 2.27862 NA Intergenic Intergenic 138151 NM_152573 158158 Hs.129136 NM_152573 HPRD:08337 RASEF RAB45 RAS and EF-hand domain containing protein-coding Atac153_MAPQ30_peak_2071 chr14 101320968 101320968 + 2.27862 NA TTS (NR_046473) TTS (NR_046473) 2241 NR_030528 768222 NR_030528 miRBase:MI0005118 MIR770 MIRN770|hsa-mir-770 microRNA 770 ncRNA Atac153_MAPQ30_peak_1094 chr11 13780784 13780784 + 2.27862 NA Intergenic Intergenic 90578 NM_032228 84188 Hs.501991 NM_032228 HPRD:14724 FAR1 MLSTD2|SDR10E1 fatty acyl CoA reductase 1 protein-coding Atac153_MAPQ30_peak_520 chr1 212659473 212659473 + 2.27862 NA Intergenic Intergenic 53244 NM_013349 29937 Hs.461787 NM_013349 HPRD:11603 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding Atac153_MAPQ30_peak_3917 chr2 235644635 235644635 + 2.27862 NA Intergenic Intergenic -215993 NM_014521 23677 Hs.516777 NM_014521 HPRD:09285 SH3BP4 BOG25|TTP SH3-domain binding protein 4 protein-coding Atac153_MAPQ30_peak_7026 chrX 49116697 49116697 + 2.27862 NA intron (NM_001114377, intron 1 of 10) MLT1C|LTR|ERVL-MaLR 4591 NM_014009 50943 Hs.247700 NM_014009 HPRD:02242 FOXP3 AIID|DIETER|IPEX|PIDX|XPID forkhead box P3 protein-coding Atac153_MAPQ30_peak_4345 chr22 22391614 22391614 + 2.27862 NA Intergenic Intergenic -54374 NM_001282113 8940 Hs.436401 NM_003935 HPRD:04662 TOP3B TOP3B1 topoisomerase (DNA) III beta protein-coding Atac153_MAPQ30_peak_3650 chr2 105593418 105593418 + 2.27862 NA intron (NR_110603, intron 1 of 2) LTR50|LTR|ERVL -61065 NM_182640 64965 Hs.590900 NM_182640 HPRD:17602 MRPS9 MRP-S9|RPMS9|S9mt mitochondrial ribosomal protein S9 protein-coding Atac153_MAPQ30_peak_5797 chr6 138149429 138149429 + 2.27862 NA intron (NR_049793, intron 3 of 3) MER5B|DNA|hAT-Charlie -38896 NM_001270508 7128 Hs.211600 NM_006290 HPRD:01857 TNFAIP3 A20|OTUD7C|TNFA1P2 tumor necrosis factor, alpha-induced protein 3 protein-coding Atac153_MAPQ30_peak_3468 chr2 27435733 27435733 + 2.27862 NA promoter-TSS (NM_021095) promoter-TSS (NM_021095) 514 NM_001170795 51374 Hs.9527 NM_016085 HPRD:16652 ATRAID APR--3|APR-3|APR3|C2orf28|PRO240|p18 all-trans retinoic acid-induced differentiation factor protein-coding Atac153_MAPQ30_peak_2134 chr15 40612427 40612427 + 2.27862 NA Intergenic Intergenic -3830 NM_001301268 100505573 Hs.530791 NM_001301268 INAFM2 LINC00984|OGU1 InaF-motif containing 2 protein-coding Atac153_MAPQ30_peak_1019 chr10 133290482 133290482 + 2.27862 NA Intergenic Intergenic -180498 NM_174937 256536 Hs.126575 NM_174937 HPRD:18170 TCERG1L - transcription elongation regulator 1-like protein-coding Atac153_MAPQ30_peak_4595 chr3 20537788 20537788 + 2.27862 NA Intergenic L1M1|LINE|L1 153828 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA Atac153_MAPQ30_peak_2058 chr14 99663468 99663468 + 2.27862 NA intron (NM_001282238, intron 2 of 2) intron (NM_001282238, intron 2 of 2) 74582 NM_022898 64919 Hs.709690 NM_022898 HPRD:05950 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|RIT1|ZNF856B|hRIT1-alpha B-cell CLL/lymphoma 11B (zinc finger protein) protein-coding Atac153_MAPQ30_peak_1232 chr11 66669689 66669689 + 2.27862 NA intron (NM_001040716, intron 3 of 22) intron (NM_001040716, intron 3 of 22) 5651 NM_022172 5091 Hs.89890 NM_000920 HPRD:02032 PC PCB pyruvate carboxylase protein-coding Atac153_MAPQ30_peak_4782 chr3 107741543 107741543 + 2.27862 NA Intergenic MER50|LTR|ERV1 68392 NM_198793 961 Hs.446414 NM_001777 HPRD:03017 CD47 IAP|MER6|OA3 CD47 molecule protein-coding Atac153_MAPQ30_peak_1466 chr12 19117648 19117648 + 2.27862 NA Intergenic L1MA3|LINE|L1 -164978 NM_019012 54477 Hs.188614 NM_019012 HPRD:09684 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing, family A member 5 protein-coding Atac153_MAPQ30_peak_1359 chr11 120659556 120659556 + 2.27862 NA intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 224361 NM_001282473 2900 Hs.538738 NM_014619 HPRD:02613 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate receptor, ionotropic, kainate 4 protein-coding Atac153_MAPQ30_peak_421 chr1 165085750 165085750 + 2.27862 NA Intergenic Intergenic 239728 NM_001174069 4009 Hs.667312 NM_177398 HPRD:02623 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1, alpha protein-coding Atac153_MAPQ30_peak_2927 chr17 72974209 72974209 + 2.27862 NA Intergenic L2|LINE|L2 -5309 NM_030630 283987 Hs.11067 NM_030630 HPRD:05766 HID1 C17orf28|DMC1|HID-1 HID1 domain containing protein-coding Atac153_MAPQ30_peak_3904 chr2 233340462 233340462 + 2.27862 NA Intergenic AluSq2|SINE|Alu 12107 NM_004826 9427 Hs.26880 NM_004826 HPRD:07066 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme-like 1 protein-coding Atac153_MAPQ30_peak_6528 chr8 140789133 140789133 + 2.27862 NA intron (NM_031466, intron 21 of 22) intron (NM_031466, intron 21 of 22) -73834 NM_001282534 51305 Hs.493037 NM_001282534 HPRD:16167 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium channel, subfamily K, member 9 protein-coding Atac153_MAPQ30_peak_3536 chr2 49695891 49695891 + 2.26229 NA Intergenic L1M1|LINE|L1 -314225 NM_181446 2492 Hs.1428 NM_000145 HPRD:00639 FSHR FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding Atac153_MAPQ30_peak_1303 chr11 104401938 104401938 + 2.26229 NA Intergenic LTR50|LTR|ERVL 78092 NR_120585 102723895 Hs.48803 NR_120585 LOC102723895 - uncharacterized LOC102723895 ncRNA Atac153_MAPQ30_peak_2298 chr15 87666200 87666200 + 2.25673 NA Intergenic Intergenic -453960 NR_026869 145978 Hs.350808 NM_152454 HPRD:08101 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA Atac153_MAPQ30_peak_4579 chr3 13941265 13941265 + 2.25673 NA Intergenic L2|LINE|L2 -19647 NM_004625 7476 Hs.72290 NM_004625 WNT7A - wingless-type MMTV integration site family, member 7A protein-coding Atac153_MAPQ30_peak_6303 chr8 20801632 20801632 + 2.25673 NA Intergenic Intergenic -29865 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LOC286114 - uncharacterized LOC286114 ncRNA Atac153_MAPQ30_peak_848 chr10 87985188 87985188 + 2.25673 NA intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) 39357 NR_029907 442911 NR_029907 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA Atac153_MAPQ30_peak_5103 chr4 77648644 77648644 + 2.25673 NA intron (NM_020859, intron 3 of 10) intron (NM_020859, intron 3 of 10) 153923 NR_039654 100616299 NR_039654 MIR4450 - microRNA 4450 ncRNA Atac153_MAPQ30_peak_1171 chr11 45512234 45512234 + 2.25673 NA Intergenic MER82|DNA|TcMar-Tigger 119286 NR_122071 399886 Hs.559970 NR_122071 HPRD:13453 LOC399886 - uncharacterized LOC399886 ncRNA Atac153_MAPQ30_peak_5551 chr6 353114 353114 + 2.25673 NA Intergenic Intergenic -38625 NR_046000 3662 Hs.401013 NM_002460 HPRD:03543 IRF4 LSIRF|MUM1|NF-EM5 interferon regulatory factor 4 protein-coding Atac153_MAPQ30_peak_4341 chr22 21307128 21307128 + 2.25673 NA 3' UTR (NM_005207, exon 3 of 3) 3' UTR (NM_005207, exon 3 of 3) -4252 NR_110537 101928891 Hs.648264 NR_110537 LOC101928891 - uncharacterized LOC101928891 ncRNA Atac153_MAPQ30_peak_2842 chr17 44026155 44026155 + 2.25673 NA intron (NM_001123066, intron 1 of 14).2 MIR|SINE|MIR -50461 NM_001007532 246744 Hs.661831 NM_001007532 HPRD:06142 STH MAPTIT saitohin protein-coding Atac153_MAPQ30_peak_2301 chr15 89022997 89022997 + 2.25673 NA Intergenic Intergenic 12313 NM_176805 64963 Hs.111286 NM_022839 HPRD:14776 MRPS11 HCC-2 mitochondrial ribosomal protein S11 protein-coding Atac153_MAPQ30_peak_5057 chr4 32064227 32064227 + 2.25673 NA Intergenic HERVL-int|LTR|ERVL 1342190 NM_032457 5099 Hs.479439 NM_002589 HPRD:04288 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding Atac153_MAPQ30_peak_5111 chr4 78340842 78340842 + 2.25673 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -92065 NM_006419 10563 Hs.100431 NM_006419 HPRD:05513 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 chemokine (C-X-C motif) ligand 13 protein-coding Atac153_MAPQ30_peak_5192 chr4 178644512 178644512 + 2.25673 NA Intergenic MER5B|DNA|hAT-Charlie -5399 NR_028342 285501 Hs.722466 NM_001085490 ENSG00000231171 LINC01098 - long intergenic non-protein coding RNA 1098 ncRNA Atac153_MAPQ30_peak_6746 chr9 111626542 111626542 + 2.25673 NA TTS (NM_006687) TTS (NM_006687) 2034 NM_006687 10881 Hs.123530 NM_006687 HPRD:11976 ACTL7A - actin-like 7A protein-coding Atac153_MAPQ30_peak_5267 chr5 13480520 13480520 + 2.25673 NA Intergenic Intergenic 464069 NM_001369 1767 Hs.212360 NM_001369 HPRD:04514 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein, axonemal, heavy chain 5 protein-coding Atac153_MAPQ30_peak_4952 chr4 28938 28938 + 2.25673 NA Intergenic Intergenic -24241 NM_001286053 152687 Hs.709469 NM_182524 ZNF595 - zinc finger protein 595 protein-coding Atac153_MAPQ30_peak_2702 chr17 10151426 10151426 + 2.25673 NA Intergenic MLT1K|LTR|ERVL-MaLR -49558 NM_201433 8522 Hs.462214 NM_003644 HPRD:16011 GAS7 MLL/GAS7 growth arrest-specific 7 protein-coding Atac153_MAPQ30_peak_60 chr1 9792651 9792651 + 2.25673 NA intron (NM_001009566, intron 16 of 18) intron (NM_001009566, intron 16 of 18) -78007 NR_027045 644997 Hs.568595 NM_001045478 ENSG00000179840 C1orf200 - chromosome 1 open reading frame 200 ncRNA Atac153_MAPQ30_peak_2563 chr16 71011808 71011808 + 2.22482 NA intron (NM_001270974, intron 30 of 85) L2|LINE|L2 -176747 NM_018052 55697 Hs.445061 NM_018052 HPRD:07660 VAC14 ArPIKfyve|TAX1BP2|TRX Vac14 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_6981 chrX 37971731 37971731 + 2.20910 NA intron (NM_001163335, intron 14 of 17) LTR16A2|LTR|ERVL 78944 NM_001163334 94122 Hs.662334 NM_138780 HPRD:06736 SYTL5 slp5 synaptotagmin-like 5 protein-coding Atac153_MAPQ30_peak_3725 chr2 129708674 129708674 + 2.20910 NA Intergenic Intergenic 86500 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA Atac153_MAPQ30_peak_951 chr10 125430381 125430381 + 2.20910 NA intron (NM_153442, intron 1 of 2) MER115|DNA|hAT-Tip100 4510 NM_153442 2849 Hs.12751 NM_153442 GPR26 - G protein-coupled receptor 26 protein-coding Atac153_MAPQ30_peak_5615 chr6 24703143 24703143 + 2.20910 NA 3' UTR (NM_001160094, exon 4 of 4) 3' UTR (NM_001160094, exon 4 of 4) 16260 NM_030939 81688 Hs.744857 NM_030939 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding Atac153_MAPQ30_peak_6737 chr9 105183180 105183180 + 2.20910 NA Intergenic L1MDa|LINE|L1 -98739 NR_103830 414319 Hs.385790 NR_103830 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA Atac153_MAPQ30_peak_6418 chr8 94638856 94638856 + 2.20910 NA intron (NR_033858, intron 5 of 10) L2a|LINE|L2 73805 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA Atac153_MAPQ30_peak_2114 chr15 29148812 29148812 + 2.20910 NA Intergenic Intergenic -54991 NR_047567 728310 Hs.589351 NR_047567 ENSG00000261649 GOLGA6L7P GOLGA6L7 golgin A6 family-like 7, pseudogene pseudo Atac153_MAPQ30_peak_5293 chr5 34532344 34532344 + 2.20910 NA Intergenic MER115|DNA|hAT-Tip100 -124089 NM_015577 26064 Hs.431400 NM_015577 HPRD:09416 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding Atac153_MAPQ30_peak_1758 chr13 21670900 21670900 + 2.20910 NA Intergenic AluJo|SINE|Alu -35178 NM_014572 26524 Hs.78960 NM_014572 HPRD:07277 LATS2 KPM large tumor suppressor kinase 2 protein-coding Atac153_MAPQ30_peak_4639 chr3 39430617 39430617 + 2.20910 NA intron (NM_017875, intron 1 of 6) intron (NM_017875, intron 1 of 6) 5802 NM_017875 54977 Hs.369615 NM_017875 HPRD:07925 SLC25A38 - solute carrier family 25, member 38 protein-coding Atac153_MAPQ30_peak_2171 chr15 58249804 58249804 + 2.20910 NA intron (NM_170696, intron 11 of 11) intron (NM_170696, intron 11 of 11) 56491 NM_170697 8854 Hs.643455 NM_003888 HPRD:04733 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family, member A2 protein-coding Atac153_MAPQ30_peak_2499 chr16 49640898 49640898 + 2.20910 NA intron (NM_015069, intron 5 of 7) intron (NM_015069, intron 5 of 7) 215751 NM_015069 23090 Hs.530930 NM_015069 HPRD:05189 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104 zinc finger protein 423 protein-coding Atac153_MAPQ30_peak_329 chr1 112740360 112740360 + 2.20910 NA Intergenic Intergenic -198440 NM_018704 55917 Hs.744100 NM_018704 HPRD:10906 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding Atac153_MAPQ30_peak_6689 chr9 93536965 93536965 + 2.11384 NA Intergenic Intergenic -26997 NM_003177 6850 Hs.371720 NM_003177 HPRD:02514 SYK p72-Syk spleen tyrosine kinase protein-coding Atac153_MAPQ30_peak_3612 chr2 91793981 91793981 + 2.06099 NA Intergenic Intergenic 53994 NR_027238 654342 Hs.469287 NR_027238 ENSG00000143429 LOC654342 - lymphocyte-specific protein 1 pseudogene pseudo Atac153_MAPQ30_peak_3117 chr18 55557747 55557747 + 2.05447 NA Intergenic L3|LINE|CR1 -87420 NM_005603 5205 Hs.216623 NM_005603 HPRD:03867 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 protein-coding Atac153_MAPQ30_peak_3107 chr18 51525919 51525919 + 2.05447 NA Intergenic Intergenic 222863 NR_002970 677819 Hs.655869 NR_002970 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA Atac153_MAPQ30_peak_4779 chr3 102980215 102980215 + 2.01302 NA Intergenic L1MD1|LINE|L1 826356 NM_175056 131368 Hs.352213 NM_175056 HPRD:14048 ZPLD1 - zona pellucida-like domain containing 1 protein-coding Atac153_MAPQ30_peak_3777 chr2 159415760 159415760 + 2.01302 NA intron (NM_001005476, intron 2 of 20) intron (NM_001005476, intron 2 of 20) 102284 NM_001005476 8502 Hs.407580 NM_003628 HPRD:05043 PKP4 p0071 plakophilin 4 protein-coding Atac153_MAPQ30_peak_1093 chr11 13740205 13740205 + 2.01302 NA intron (NM_032228, intron 9 of 11) MLT1G|LTR|ERVL-MaLR 49999 NM_032228 84188 Hs.501991 NM_032228 HPRD:14724 FAR1 MLSTD2|SDR10E1 fatty acyl CoA reductase 1 protein-coding Atac153_MAPQ30_peak_3072 chr18 43967168 43967168 + 1.96283 NA intron (NM_001256758, intron 1 of 5) MER5A|DNA|hAT-Charlie 52981 NM_001256758 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|RNF111L2 ring finger protein 165 protein-coding Atac153_MAPQ30_peak_2110 chr15 27842878 27842878 + 1.96283 NA Intergenic MLT1A0|LTR|ERVL-MaLR -436412 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 LOC101928869 - uncharacterized LOC101928869 ncRNA Atac153_MAPQ30_peak_2789 chr17 29419538 29419538 + 1.96283 NA Intergenic Intergenic 1905 NR_039886 100616266 NR_039886 miRBase:MI0017370 MIR4733 - microRNA 4733 ncRNA Atac153_MAPQ30_peak_6318 chr8 24525681 24525681 + 1.96283 NA Intergenic Intergenic -119550 NR_125808 101929294 Hs.637673 NR_125808 LOC101929294 - uncharacterized LOC101929294 ncRNA Atac153_MAPQ30_peak_5269 chr5 13972587 13972587 + 1.96283 NA Intergenic L1PB1|LINE|L1 -27998 NM_001369 1767 Hs.212360 NM_001369 HPRD:04514 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein, axonemal, heavy chain 5 protein-coding Atac153_MAPQ30_peak_6656 chr9 82537094 82537094 + 1.96283 NA intron (NR_121213, intron 1 of 2) MER77B|LTR|ERVL -52844 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 - long intergenic non-protein coding RNA 1507 ncRNA Atac153_MAPQ30_peak_4239 chr21 20452884 20452884 + 1.96283 NA Intergenic MSTA|LTR|ERVL-MaLR -320754 NR_109925 101927797 Hs.551743 NR_109925 LOC101927797 - uncharacterized LOC101927797 ncRNA Atac153_MAPQ30_peak_6263 chr8 5916352 5916352 + 1.96283 NA Intergenic Intergenic 347717 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA Atac153_MAPQ30_peak_3981 chr20 3020938 3020938 + 1.96283 NA Intergenic Intergenic -3330 NM_178331 2797 Hs.129715 NM_001501 HPRD:03830 GNRH2 GnRH-II|LH-RHII gonadotropin-releasing hormone 2 protein-coding Atac153_MAPQ30_peak_2341 chr15 100560907 100560907 + 1.96283 NA intron (NM_139057, intron 18 of 21) intron (NM_139057, intron 18 of 21) -213775 NR_003260 196968 Hs.567763 NM_194295 HPRD:13192 DNM1P46 C15orf51|DNM1DN14.2|DNM1DN14@ DNM1 pseudogene 46 pseudo Atac153_MAPQ30_peak_2494 chr16 48733993 48733993 + 1.96283 NA Intergenic MIR|SINE|MIR -89873 NM_153029 9683 Hs.511839 NM_153029 HPRD:08109 N4BP1 - NEDD4 binding protein 1 protein-coding Atac153_MAPQ30_peak_4141 chr20 47452421 47452421 + 1.96283 NA Intergenic L2a|LINE|L2 -8001 NM_020820 57580 Hs.153310 NM_020820 HPRD:06066 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 protein-coding Atac153_MAPQ30_peak_204 chr1 37757163 37757163 + 1.96283 NA Intergenic Intergenic 129999 NR_036217 100422898 NR_036217 miRBase:MI0015863 MIR4255 - microRNA 4255 ncRNA Atac153_MAPQ30_peak_5970 chr7 36975657 36975657 + 1.96283 NA intron (NM_001206480, intron 16 of 21) MLT1L|LTR|ERVL-MaLR -16620 NR_031604 100302113 NR_031604 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA Atac153_MAPQ30_peak_6493 chr8 132051100 132051100 + 1.96283 NA intron (NM_001115, intron 1 of 17) MIRb|SINE|MIR 1735 NM_001115 114 Hs.591859 NM_001115 HPRD:00051 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 (brain) protein-coding Atac153_MAPQ30_peak_5369 chr5 108566851 108566851 + 1.96283 NA Intergenic Intergenic 178824 NM_014819 9867 Hs.483036 NM_014819 HPRD:11436 PJA2 Neurodap1|RNF131 praja ring finger 2, E3 ubiquitin protein ligase protein-coding Atac153_MAPQ30_peak_3927 chr2 237572134 237572134 + 1.96283 NA Intergenic Intergenic 93754 NM_020311 57007 Hs.471751 NM_020311 HPRD:09882 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding Atac153_MAPQ30_peak_7033 chrX 50935732 50935732 + 1.96283 NA Intergenic MSTB-int|LTR|ERVL-MaLR -21500 NR_110382 101926971 Hs.657995 NR_110382 LINC01284 - long intergenic non-protein coding RNA 1284 ncRNA Atac153_MAPQ30_peak_362 chr1 142536410 142536410 + 1.96283 NA Intergenic (GAATG)n|Simple_repeat|Simple_repeat 177195 NR_046228 100874392 Hs.648245 NR_046228 ANKRD20A12P - ankyrin repeat domain 20 family, member A12, pseudogene pseudo Atac153_MAPQ30_peak_7166 chrX 114285954 114285954 + 1.96283 NA Intergenic L2a|LINE|L2 -33747 NM_000640 3598 Hs.336046 NM_000640 HPRD:02132 IL13RA2 CD213A2|CT19|IL-13R|IL13BP interleukin 13 receptor, alpha 2 protein-coding Atac153_MAPQ30_peak_2571 chr16 74768226 74768226 + 1.96283 NA intron (NM_024306, intron 2 of 6) intron (NM_024306, intron 2 of 6) -33437 NM_001142497 197259 Hs.119878 NM_152649 HPRD:08752 MLKL hMLKL mixed lineage kinase domain-like protein-coding Atac153_MAPQ30_peak_6462 chr8 121048412 121048412 + 1.96283 NA intron (NM_001283012, intron 6 of 6) intron (NM_001283012, intron 6 of 6) -88935 NM_021110 7373 Hs.409662 NM_021110 HPRD:00379 COL14A1 UND collagen, type XIV, alpha 1 protein-coding Atac153_MAPQ30_peak_6644 chr9 79504890 79504890 + 1.96283 NA intron (NM_015225, intron 1 of 18) MER5A1|DNA|hAT-Charlie 16113 NM_015225 158471 Hs.262857 NM_015225 HPRD:12970 PRUNE2 A214N16.3|BMCC1|BNIPXL|C9orf65|KIAA0367|bA214N16.3 prune homolog 2 (Drosophila) protein-coding Atac153_MAPQ30_peak_1526 chr12 53647706 53647706 + 1.96283 NA exon (NM_001170790, exon 2 of 2) exon (NM_001170790, exon 2 of 2) 1830 NM_032889 84975 Hs.654660 NM_032889 HPRD:14416 MFSD5 hsMOT2 major facilitator superfamily domain containing 5 protein-coding Atac153_MAPQ30_peak_4477 chr22 45502570 45502570 + 1.96283 NA Intergenic Intergenic 45895 NR_038957 100506714 Hs.189902 NR_038956 NUP50-AS1 - NUP50 antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_3321 chr19 46376794 46376794 + 1.96283 NA 3' UTR (NM_004497, exon 2 of 2) 3' UTR (NM_004497, exon 2 of 2) 9276 NM_004497 3171 Hs.36137 NM_004497 HPRD:03802 FOXA3 FKHH3|HNF3G|TCF3G forkhead box A3 protein-coding Atac153_MAPQ30_peak_2816 chr17 39488509 39488509 + 1.96283 NA Intergenic MIR|SINE|MIR -16562 NM_031964 83902 Hs.307009 NM_031964 HPRD:13935 KRTAP17-1 KAP17.1|KRTAP16.1|KRTAP17.1 keratin associated protein 17-1 protein-coding Atac153_MAPQ30_peak_5060 chr4 36066458 36066458 + 1.96283 NA Intergenic Intergenic -179280 NR_122079 439933 Hs.591071 NR_122079 ENSG00000247193 LOC439933 - uncharacterized LOC439933 ncRNA Atac153_MAPQ30_peak_1117 chr11 19475412 19475412 + 1.96283 NA intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) 53364 NR_049725 100874012 Hs.434602 NR_049725 ENSG00000255043 NAV2-AS5 - NAV2 antisense RNA 5 ncRNA Atac153_MAPQ30_peak_5411 chr5 133879772 133879772 + 1.96283 NA intron (NM_001289984, intron 3 of 10) intron (NM_001289984, intron 3 of 10) 17974 NM_015288 23338 Hs.732155 NM_015288 HPRD:15124 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding Atac153_MAPQ30_peak_3060 chr18 35240673 35240673 + 1.96283 NA Intergenic Intergenic 3575 NR_036202 100422857 NR_036202 miRBase:MI0015847 MIR4318 - microRNA 4318 ncRNA Atac153_MAPQ30_peak_4212 chr20 61496586 61496586 + 1.96283 NA Intergenic L1MEc|LINE|L1 -3471 NM_006602 10732 Hs.126248 NM_006602 HPRD:05297 TCFL5 CHA|E2BP-1|Figlb|bHLHe82 transcription factor-like 5 (basic helix-loop-helix) protein-coding Atac153_MAPQ30_peak_280 chr1 59940268 59940268 + 1.96283 NA intron (NM_001113411, intron 6 of 16) intron (NM_001113411, intron 6 of 16) -41033 NM_001278224 55277 Hs.444301 NM_018291 HPRD:07721 FGGY - FGGY carbohydrate kinase domain containing protein-coding Atac153_MAPQ30_peak_4426 chr22 36510711 36510711 + 1.96283 NA Intergenic Intergenic 46266 NR_027833 80833 Hs.474737 NM_014349 HPRD:06264 APOL3 APOLIII|CG121 apolipoprotein L, 3 protein-coding Atac153_MAPQ30_peak_4687 chr3 50621882 50621882 + 1.96283 NA 3' UTR (NM_016173, exon 11 of 11) 3' UTR (NM_016173, exon 11 of 11) -13424 NM_001171741 51161 Hs.517860 NM_016210 HPRD:16654 C3orf18 G20 chromosome 3 open reading frame 18 protein-coding Atac153_MAPQ30_peak_4260 chr21 36371462 36371462 + 1.96283 NA intron (NM_001754, intron 2 of 8) intron (NM_001754, intron 2 of 8) 40261 NR_026812 80215 Hs.672131 NM_025143 RUNX1-IT1 C21orf96 RUNX1 intronic transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4346 chr22 22962470 22962470 + 1.96283 NA Intergenic Intergenic 24542 NR_024591 25812 Hs.367764 NR_024591 POM121L1P POM121L1 POM121 transmembrane nucleoporin-like 1, pseudogene pseudo Atac153_MAPQ30_peak_6039 chr7 67067393 67067393 + 1.96283 NA Intergenic Intergenic 266430 NR_108104 101929736 Hs.634050 NR_108104 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA Atac153_MAPQ30_peak_308 chr1 95352323 95352323 + 1.96283 NA intron (NM_001301079, intron 11 of 13) intron (NM_001301079, intron 11 of 13) 39041 NM_001286056 1266 Hs.483454 NM_001839 HPRD:03848 CNN3 - calponin 3, acidic protein-coding Atac153_MAPQ30_peak_6319 chr8 25199735 25199735 + 1.96283 NA intron (NM_024940, intron 24 of 51) intron (NM_024940, intron 24 of 51) -3183 NR_106936 102465527 NR_106936 MIR6876 hsa-mir-6876 microRNA 6876 ncRNA Atac153_MAPQ30_peak_1206 chr11 61671962 61671962 + 1.96283 NA intron (NM_001271686, intron 6 of 8) intron (NM_001271686, intron 6 of 8) -12945 NM_021727 3995 Hs.21765 NM_021727 HPRD:07547 FADS3 CYB5RP|LLCDL3 fatty acid desaturase 3 protein-coding Atac153_MAPQ30_peak_6475 chr8 126446024 126446024 + 1.96283 NA intron (NM_001282985, intron 2 of 2) intron (NM_001282985, intron 2 of 2) 1573 NM_001282985 10221 Hs.444947 NM_025195 HPRD:09863 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding Atac153_MAPQ30_peak_2797 chr17 32416632 32416632 + 1.96283 NA intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 67193 NM_001094 40 Hs.368417 NM_001094 HPRD:03471 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid-sensing (proton-gated) ion channel 2 protein-coding Atac153_MAPQ30_peak_1298 chr11 95175908 95175908 + 1.96283 NA Intergenic Intergenic -210203 NM_001271594 143686 Hs.120633 NM_144665 HPRD:09682 SESN3 SEST3 sestrin 3 protein-coding Atac153_MAPQ30_peak_1496 chr12 41214329 41214329 + 1.96283 NA intron (NM_001843, intron 1 of 23) intron (NM_001843, intron 1 of 23) -7411 NM_001256064 1272 Hs.143434 NM_001843 HPRD:07189 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding Atac153_MAPQ30_peak_5578 chr6 6498055 6498055 + 1.96283 NA intron (NR_026970, intron 3 of 7) intron (NR_026970, intron 3 of 7) -90879 NM_004271 9450 Hs.653138 NM_004271 LY86 MD-1|MMD-1|dJ80N2.1 lymphocyte antigen 86 protein-coding Atac153_MAPQ30_peak_750 chr10 49657183 49657183 + 1.96283 NA intron (NR_045675, intron 10 of 10) intron (NR_045675, intron 10 of 10) 44509 NM_001256026 58504 Hs.655672 NM_021226 HPRD:12476 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding Atac153_MAPQ30_peak_5853 chr6 167919597 167919597 + 1.96283 NA Intergenic Intergenic -121599 NM_004610 6953 Hs.351 NM_004610 TCP10 TCP10A t-complex 10 protein-coding Atac153_MAPQ30_peak_5764 chr6 118061728 118061728 + 1.96283 NA Intergenic Intergenic 65111 NM_138459 116150 Hs.289008 NM_138459 HPRD:12894 NUS1 C6orf68|MGC:7199|NgBR|TANGO14 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_5481 chr5 167413347 167413347 + 1.96283 NA intron (NM_001122679, intron 4 of 28) intron (NM_001122679, intron 4 of 28) 246030 NR_109894 101927862 Hs.659376 NR_109894 ENSG00000253978 CTB-178M22.2 - uncharacterized LOC101927862 ncRNA Atac153_MAPQ30_peak_3935 chr2 238524886 238524886 + 1.96283 NA Intergenic Intergenic -11338 NM_001137550 9208 Hs.471779 NM_004735 HPRD:04460 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP leucine rich repeat (in FLII) interacting protein 1 protein-coding Atac153_MAPQ30_peak_2029 chr14 93093680 93093680 + 1.96283 NA intron (NM_024832, intron 4 of 9) HERVI-int|LTR|ERV1 113555 NM_024832 79890 Hs.326822 NM_024832 HPRD:11494 RIN3 - Ras and Rab interactor 3 protein-coding Atac153_MAPQ30_peak_6540 chr8 142440964 142440964 + 1.96283 NA intron (NM_032611, intron 4 of 4) intron (NM_032611, intron 4 of 4) 9476 NM_032611 11156 Hs.43666 NM_007079 PTP4A3 PRL-3|PRL-R|PRL3 protein tyrosine phosphatase type IVA, member 3 protein-coding Atac153_MAPQ30_peak_6253 chr8 2209533 2209533 + 1.96283 NA Intergenic Intergenic 184864 NR_106983 102465695 NR_106983 MIR7160 hsa-mir-7160 microRNA 7160 ncRNA Atac153_MAPQ30_peak_5528 chr5 177574134 177574134 + 1.96283 NA intron (NM_001288795, intron 8 of 10) intron (NM_001288795, intron 8 of 10) 6827 NM_017838 55651 Hs.744074 NM_017838 HPRD:07570 NHP2 DKCB2|NHP2P|NOLA2 NHP2 ribonucleoprotein protein-coding Atac153_MAPQ30_peak_5181 chr4 167020457 167020457 + 1.96283 NA exon (NM_012464, exon 20 of 21) exon (NM_012464, exon 20 of 21) 226047 NM_012464 7092 Hs.106513 NM_012464 HPRD:07074 TLL1 ASD6|TLL tolloid-like 1 protein-coding Atac153_MAPQ30_peak_2698 chr17 9705659 9705659 + 1.96283 NA Intergenic Intergenic -11045 NM_001220493 201140 Hs.61684 NM_001105571 ENSG00000184544 DHRS7C SDR32C2 dehydrogenase/reductase (SDR family) member 7C protein-coding Atac153_MAPQ30_peak_916 chr10 115254382 115254382 + 1.96283 NA Intergenic Intergenic -56208 NM_001177660 3026 Hs.422542 NM_004132 HPRD:04890 HABP2 FSAP|HABP|HGFAL|PHBP hyaluronan binding protein 2 protein-coding Atac153_MAPQ30_peak_5297 chr5 36033559 36033559 + 1.96283 NA Intergenic MER70A|LTR|ERVL -32429 NM_001171873 133688 Hs.254699 NM_152404 HPRD:08175 UGT3A1 - UDP glycosyltransferase 3 family, polypeptide A1 protein-coding Atac153_MAPQ30_peak_926 chr10 119012382 119012382 + 1.96283 NA intron (NM_003054, intron 3 of 15) intron (NM_003054, intron 3 of 15) 11798 NM_003054 6571 Hs.596992 NM_003054 HPRD:01896 SLC18A2 SVAT|SVMT|VAT2|VMAT2 solute carrier family 18 (vesicular monoamine transporter), member 2 protein-coding Atac153_MAPQ30_peak_3491 chr2 31525149 31525149 + 1.96283 NA Intergenic Intergenic 68269 NM_014600 30845 Hs.368808 NM_014600 EHD3 PAST3 EH-domain containing 3 protein-coding Atac153_MAPQ30_peak_2194 chr15 65153360 65153360 + 1.96283 NA intron (NM_025201, intron 4 of 5) intron (NM_025201, intron 4 of 5) 19278 NM_025201 80301 Hs.709337 NM_025201 HPRD:15910 PLEKHO2 PLEKHQ1|PP1628|pp9099 pleckstrin homology domain containing, family O member 2 protein-coding Atac153_MAPQ30_peak_7216 chrX 131916564 131916564 + 1.96283 NA intron (NM_001077188, intron 3 of 5) intron (NM_001077188, intron 3 of 5) 114894 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2065 chr14 100910592 100910592 + 1.96283 NA intron (NM_001161476, intron 2 of 6) intron (NM_001161476, intron 2 of 6) 67759 NM_024515 79446 Hs.497600 NM_024515 HPRD:14649 WDR25 C14orf67 WD repeat domain 25 protein-coding Atac153_MAPQ30_peak_3779 chr2 160043927 160043927 + 1.96283 NA TTS (NR_106948) TTS (NR_106948) 581 NR_106948 102465535 NR_106948 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA Atac153_MAPQ30_peak_2857 chr17 48242064 48242064 + 1.96283 NA Intergenic MIRb|SINE|MIR -1302 NM_000023 6442 Hs.463412 NM_000023 HPRD:02525 SGCA 50-DAG|A2|ADL|DAG2|DMDA2|LGMD2D|SCARMD1|adhalin sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) protein-coding Atac153_MAPQ30_peak_695 chr10 25393675 25393675 + 1.96283 NA Intergenic Intergenic -8312 NR_120649 101929025 Hs.553324 NR_120649 ENSG00000231422 LINC01516 - long intergenic non-protein coding RNA 1516 ncRNA Atac153_MAPQ30_peak_5893 chr7 2264634 2264634 + 1.96283 NA intron (NM_001013836, intron 4 of 18) intron (NM_001013836, intron 4 of 18) 7949 NM_003550 8379 Hs.654838 NM_003550 HPRD:04065 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 MAD1 mitotic arrest deficient-like 1 (yeast) protein-coding Atac153_MAPQ30_peak_6555 chr8 143709413 143709413 + 1.96283 NA Intergenic Intergenic -13580 NM_015193 23237 Hs.40888 NM_015193 ARC Arg3.1 activity-regulated cytoskeleton-associated protein protein-coding Atac153_MAPQ30_peak_5983 chr7 44747225 44747225 + 1.96283 NA exon (NM_001165036, exon 22 of 23) exon (NM_001165036, exon 22 of 23) -40940 NM_001300959 83637 Hs.77978 NM_031449 HPRD:13225 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger, MIZ-type containing 2 protein-coding Atac153_MAPQ30_peak_777 chr10 70359166 70359166 + 1.96283 NA intron (NM_030625, intron 2 of 11) intron (NM_030625, intron 2 of 11) 39049 NM_030625 80312 Hs.567594 NM_030625 HPRD:09694 TET1 CXXC6|LCX|bA119F7.1 tet methylcytosine dioxygenase 1 protein-coding Atac153_MAPQ30_peak_5782 chr6 133375474 133375474 + 1.96283 NA Intergenic MIR3|SINE|MIR -33745 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA Atac153_MAPQ30_peak_7135 chrX 100057518 100057518 + 1.96283 NA Intergenic Intergenic -17830 NM_001325 1478 Hs.132370 NM_001325 HPRD:02652 CSTF2 CstF-64 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa protein-coding Atac153_MAPQ30_peak_5600 chr6 14925349 14925349 + 1.96283 NA Intergenic Intergenic -320857 NM_004973 3720 Hs.269059 NM_004973 HPRD:03355 JARID2 JMJ jumonji, AT rich interactive domain 2 protein-coding Atac153_MAPQ30_peak_5776 chr6 125594448 125594448 + 1.96283 NA Intergenic HERVL18-int|LTR|ERVL 28834 NM_016063 51020 Hs.32826 NM_016063 HPRD:12897 HDDC2 C6orf74|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding Atac153_MAPQ30_peak_4975 chr4 3607823 3607823 + 1.96283 NA Intergenic Intergenic 29227 NR_040045 285492 Hs.145563 NM_173661 LINC00955 - long intergenic non-protein coding RNA 955 ncRNA Atac153_MAPQ30_peak_2410 chr16 14119242 14119242 + 1.96283 NA Intergenic AluJr|SINE|Alu -4308 NR_110915 101927348 Hs.569621 NR_110915 ENSG00000261856 LOC101927348 - uncharacterized LOC101927348 ncRNA Atac153_MAPQ30_peak_6367 chr8 47109975 47109975 + 1.96283 NA Intergenic GSAT|Satellite|centr -642533 NR_027012 497634 Hs.406982 NR_027012 ENSG00000253314 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA Atac153_MAPQ30_peak_250 chr1 47693529 47693529 + 1.96283 NA intron (NM_001290404, intron 3 of 5) intron (NM_001290404, intron 3 of 5) 3858 NM_001287347 6886 Hs.705618 NM_003189 HPRD:01753 TAL1 SCL|TCL5|bHLHa17|tal-1 T-cell acute lymphocytic leukemia 1 protein-coding Atac153_MAPQ30_peak_1483 chr12 31135280 31135280 + 1.96283 NA intron (NM_001080509, intron 5 of 7) intron (NM_001080509, intron 5 of 7) 55442 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding Atac153_MAPQ30_peak_4251 chr21 34637106 34637106 + 1.96283 NA TTS (NM_001289126) TTS (NM_001289126) 1459 NR_038974 100288432 Hs.709795 NR_038974 IL10RB-AS1 IFNAR2-AS1 IL10RB antisense RNA 1 (head to head) ncRNA Atac153_MAPQ30_peak_2929 chr17 73096627 73096627 + 1.96283 NA exon (NM_004695, exon 5 of 7) exon (NM_004695, exon 5 of 7) -9455 NM_024585 79637 Hs.413047 NM_024585 HPRD:08649 ARMC7 - armadillo repeat containing 7 protein-coding Atac153_MAPQ30_peak_3604 chr2 88631087 88631087 + 1.96283 NA Intergenic Intergenic 120966 NM_001135649 344167 Hs.716722 NM_001135649 FOXI3 - forkhead box I3 protein-coding Atac153_MAPQ30_peak_6508 chr8 136370109 136370109 + 1.96283 NA Intergenic MLT1C|LTR|ERVL-MaLR -99607 NM_006558 10656 Hs.444558 NM_006558 HPRD:10007 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH domain containing, RNA binding, signal transduction associated 3 protein-coding Atac153_MAPQ30_peak_2558 chr16 70742691 70742691 + 1.96283 NA intron (NM_018052, intron 14 of 18) intron (NM_018052, intron 14 of 18) -22737 NM_138383 92154 Hs.432387 NM_138383 HPRD:14289 MTSS1L ABBA-1 metastasis suppressor 1-like protein-coding Atac153_MAPQ30_peak_6131 chr7 129939479 129939479 + 1.96283 NA intron (NM_001163446, intron 3 of 9) MIRb|SINE|MIR 6505 NM_016352 51200 Hs.93764 NM_016352 HPRD:07405 CPA4 CPA3 carboxypeptidase A4 protein-coding Atac153_MAPQ30_peak_4283 chr21 40402445 40402445 + 1.96283 NA Intergenic Intergenic -52745 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LOC101928435 - uncharacterized LOC101928435 ncRNA Atac153_MAPQ30_peak_2930 chr17 73493005 73493005 + 1.96283 NA intron (NM_014738, intron 25 of 31) intron (NM_014738, intron 25 of 31) -1624 NR_106843 102466911 NR_106843 MIR6785 hsa-mir-6785 microRNA 6785 ncRNA Atac153_MAPQ30_peak_3897 chr2 230369753 230369753 + 1.96283 NA intron (NM_139072, intron 6 of 12) MLT1J2|LTR|ERVL-MaLR 209533 NM_139072 92737 Hs.234074 NM_139072 HPRD:09531 DNER UNQ26|bet delta/notch-like EGF repeat containing protein-coding Atac153_MAPQ30_peak_2905 chr17 64946656 64946656 + 1.96283 NA Intergenic L2b|LINE|L2 -14324 NM_014405 27092 Hs.514423 NM_014405 HPRD:05911 CACNG4 - calcium channel, voltage-dependent, gamma subunit 4 protein-coding Atac153_MAPQ30_peak_2768 chr17 21313115 21313115 + 1.96283 NA intron (NM_021012, intron 2 of 2) intron (NM_021012, intron 2 of 2) 4667 NM_001194958 100134444 Hs.200629 NM_001194958 KCNJ18 KIR2.6|TTPP2 potassium inwardly-rectifying channel, subfamily J, member 18 protein-coding Atac153_MAPQ30_peak_1621 chr12 108709378 108709378 + 1.96283 NA intron (NM_001142344, intron 1 of 2) MIRb|SINE|MIR 5061 NM_001142345 1240 Hs.197143 NM_004072 HPRD:03829 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemokine-like receptor 1 protein-coding Atac153_MAPQ30_peak_6483 chr8 128983348 128983348 + 1.96283 NA intron (NR_003367, intron 2 of 7) MER58A|DNA|hAT-Charlie 10469 NR_031610 100302161 NR_031610 miRBase:MI0006338 MIR1205 MIRN1205|hsa-mir-1205 microRNA 1205 ncRNA Atac153_MAPQ30_peak_875 chr10 101337391 101337391 + 1.96283 NA Intergenic MIR|SINE|MIR 42830 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L solute carrier family 25 (mitochondrial iron transporter), member 28 protein-coding Atac153_MAPQ30_peak_4106 chr20 41367737 41367737 + 1.96283 NA intron (NM_133170, intron 6 of 31) intron (NM_133170, intron 6 of 31) 53614 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA Atac153_MAPQ30_peak_5565 chr6 4353329 4353329 + 1.96283 NA Intergenic Intergenic 217023 NR_103764 100507506 Hs.665936 NR_103764 ENSG00000234817 LOC100507506 - uncharacterized LOC100507506 ncRNA Atac153_MAPQ30_peak_4068 chr20 31853372 31853372 + 1.96283 NA Intergenic MLT1F|LTR|ERVL-MaLR -17569 NM_033197 92747 Hs.65551 NM_033197 HPRD:12740 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B, member 1 protein-coding Atac153_MAPQ30_peak_2039 chr14 95059765 95059765 + 1.96283 NA TTS (NM_000624) TTS (NM_000624) 12059 NM_000624 5104 Hs.159628 NM_000624 HPRD:03503 SERPINA5 PAI-3|PAI3|PCI|PCI-B|PLANH3|PROCI serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 protein-coding Atac153_MAPQ30_peak_2538 chr16 67221727 67221727 + 1.96283 NA exon (NM_178516, exon 5 of 14) exon (NM_178516, exon 5 of 14) 2380 NM_178516 283849 Hs.647356 NM_178516 HPRD:14148 EXOC3L1 EXOC3L exocyst complex component 3-like 1 protein-coding Atac153_MAPQ30_peak_5749 chr6 108107126 108107126 + 1.96283 NA intron (NM_198081, intron 1 of 7) intron (NM_198081, intron 1 of 7) 38395 NM_001286408 256380 Hs.486109 NM_198081 SCML4 dJ47M23.1 sex comb on midleg-like 4 (Drosophila) protein-coding Atac153_MAPQ30_peak_6086 chr7 98977941 98977941 + 1.96283 NA intron (NM_005720, intron 1 of 9) intron (NM_005720, intron 1 of 9) 5643 NM_005720 10095 Hs.489284 NM_005720 HPRD:10366 ARPC1B ARC41|p40-ARC|p41-ARC actin related protein 2/3 complex, subunit 1B, 41kDa protein-coding Atac153_MAPQ30_peak_4714 chr3 54990327 54990327 + 1.96283 NA intron (NM_018398, intron 27 of 37) intron (NM_018398, intron 27 of 37) -28255 NM_020678 57408 Hs.591668 NM_020678 HPRD:13718 LRTM1 - leucine-rich repeats and transmembrane domains 1 protein-coding Atac153_MAPQ30_peak_744 chr10 47104364 47104364 + 1.96283 NA intron (NR_033957, intron 1 of 3) AluSq2|SINE|Alu 17639 NM_001278795 100996758 Hs.524719 NM_001278795 LOC100996758 - neuropeptide Y receptor type 4-like protein-coding Atac153_MAPQ30_peak_3419 chr2 11974122 11974122 + 1.96283 NA Intergenic Intergenic 2990 NR_036226 100422996 NR_036226 miRBase:MI0015872 MIR4262 - microRNA 4262 ncRNA Atac153_MAPQ30_peak_808 chr10 78007443 78007443 + 1.96283 NA intron (NM_032024, intron 4 of 5) MLT1H|LTR|ERVL-MaLR 464924 NM_032024 83938 Hs.118161 NM_032024 HPRD:12560 C10orf11 OCA5|OCA7 chromosome 10 open reading frame 11 protein-coding Atac153_MAPQ30_peak_6642 chr9 77519887 77519887 + 1.96283 NA Intergenic MLT1F|LTR|ERVL-MaLR -16877 NM_017662 140803 Hs.272225 NM_017662 HPRD:06112 TRPM6 CHAK2|HMGX|HOMG|HOMG1|HSH transient receptor potential cation channel, subfamily M, member 6 protein-coding Atac153_MAPQ30_peak_296 chr1 87314917 87314917 + 1.96283 NA Intergenic Intergenic 65190 NM_004261 9403 Hs.362728 NM_004261 HPRD:09376 SEP15 - 15 kDa selenoprotein protein-coding Atac153_MAPQ30_peak_2540 chr16 67583528 67583528 + 1.96283 NA Intergenic Intergenic 12163 NM_001193524 79567 Hs.152717 NM_024519 HPRD:08586 FAM65A - family with sequence similarity 65, member A protein-coding Atac153_MAPQ30_peak_3446 chr2 20597541 20597541 + 1.96283 NA Intergenic Intergenic -46930 NM_015317 23369 Hs.467824 NM_015317 HPRD:09527 PUM2 PUMH2|PUML2 pumilio RNA-binding family member 2 protein-coding Atac153_MAPQ30_peak_1672 chr12 120071696 120071696 + 1.96283 NA intron (NM_001136534, intron 2 of 2) MER5A|DNA|hAT-Charlie -34065 NM_006253 5564 Hs.741184 NM_006253 HPRD:04116 PRKAB1 AMPK|HAMPKb protein kinase, AMP-activated, beta 1 non-catalytic subunit protein-coding Atac153_MAPQ30_peak_4864 chr3 137768127 137768127 + 1.96283 NA Intergenic FordPrefect|DNA|hAT-Tip100 39121 NM_016369 51208 Hs.655324 NM_016369 HPRD:13066 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding Atac153_MAPQ30_peak_4842 chr3 130273659 130273659 + 1.96283 NA Intergenic L1PA13|LINE|L1 -5519 NM_001102608 131873 Hs.591282 NM_001102608 ENSG00000206384 COL6A6 - collagen, type VI, alpha 6 protein-coding Atac153_MAPQ30_peak_1926 chr14 55278446 55278446 + 1.96283 NA Intergenic Intergenic 56940 NM_001161577 23034 Hs.98259 NM_015589 HPRD:10209 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding Atac153_MAPQ30_peak_1390 chr11 129743665 129743665 + 1.96283 NA exon (NM_006165, exon 20 of 25) exon (NM_006165, exon 20 of 25) 19239 NM_006165 4798 Hs.530539 NM_006165 HPRD:01240 NFRKB INO80G nuclear factor related to kappaB binding protein protein-coding Atac153_MAPQ30_peak_5431 chr5 141202903 141202903 + 1.96283 NA Intergenic Intergenic 42864 NM_001278615 5097 Hs.79769 NM_002587 HPRD:04692 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding Atac153_MAPQ30_peak_1537 chr12 56514595 56514595 + 1.96283 NA exon (NM_032786, exon 3 of 3) exon (NM_032786, exon 3 of 3) 2565 NM_032786 84872 Hs.632706 NM_032786 HPRD:07860 ZC3H10 ZC3HDC10 zinc finger CCCH-type containing 10 protein-coding Atac153_MAPQ30_peak_3701 chr2 121961154 121961154 + 1.96283 NA Intergenic L1ME3B|LINE|L1 81624 NM_014553 29842 Hs.156471 NM_014553 HPRD:18175 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2-like 1 protein-coding Atac153_MAPQ30_peak_526 chr1 214081942 214081942 + 1.96283 NA Intergenic Intergenic -16150 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA Atac153_MAPQ30_peak_5119 chr4 88217238 88217238 + 1.96283 NA Intergenic Intergenic 4497 NR_049891 100847027 NR_049891 miRBase:MI0019313 MIR5705 - microRNA 5705 ncRNA Atac153_MAPQ30_peak_2989 chr18 5198639 5198639 + 1.96283 NA Intergenic Intergenic -1384 NM_001145194 642597 Hs.437160 NM_001145194 C18orf42 - chromosome 18 open reading frame 42 protein-coding Atac153_MAPQ30_peak_1523 chr12 53163184 53163184 + 1.96283 NA intron (NM_015848, intron 8 of 8) intron (NM_015848, intron 8 of 8) 7945 NM_015848 51350 Hs.654392 NM_015848 HPRD:17123 KRT76 HUMCYT2A|KRT2B|KRT2P keratin 76 protein-coding Atac153_MAPQ30_peak_3545 chr2 60442676 60442676 + 1.96283 NA Intergenic Intergenic 171904 NR_039631 100616473 NR_039631 miRBase:MI0016772 MIR4432 - microRNA 4432 ncRNA Atac153_MAPQ30_peak_4266 chr21 38043762 38043762 + 1.96283 NA Intergenic Intergenic -28229 NM_005069 6493 Hs.146186 NM_005069 HPRD:02935 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 single-minded family bHLH transcription factor 2 protein-coding Atac153_MAPQ30_peak_1742 chr12 132478325 132478325 + 1.96283 NA intron (NM_015409, intron 11 of 52) Tigger3a|DNA|TcMar-Tigger -37444 NR_002979 677829 Hs.742405 NR_002979 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA Atac153_MAPQ30_peak_6490 chr8 131776492 131776492 + 1.96283 NA Intergenic MLT1F1|LTR|ERVL-MaLR 276343 NM_001115 114 Hs.591859 NM_001115 HPRD:00051 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 (brain) protein-coding Atac153_MAPQ30_peak_2186 chr15 61118299 61118299 + 1.96283 NA intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 144531 NR_120318 100996876 Hs.511626 NR_120318 LOC100996876 - uncharacterized LOC100996876 ncRNA Atac153_MAPQ30_peak_2251 chr15 75631950 75631950 + 1.96283 NA intron (NM_001284379, intron 5 of 5) intron (NM_001284379, intron 5 of 5) 3525 NM_001284379 54939 Hs.351327 NM_017828 HPRD:13083 COMMD4 - COMM domain containing 4 protein-coding Atac153_MAPQ30_peak_5706 chr6 52828104 52828104 + 1.96283 NA Intergenic MER21-int|LTR|ERVL 32074 NM_001512 2941 Hs.485557 NM_001512 HPRD:06899 GSTA4 GSTA4-4|GTA4 glutathione S-transferase alpha 4 protein-coding Atac153_MAPQ30_peak_2462 chr16 27418432 27418432 + 1.96283 NA intron (NM_181079, intron 2 of 9) intron (NM_181079, intron 2 of 9) 4949 NM_181078 50615 Hs.210546 NM_021798 IL21R CD360|NILR interleukin 21 receptor protein-coding Atac153_MAPQ30_peak_5256 chr5 9719541 9719541 + 1.96283 NA intron (NR_027112, intron 5 of 12) intron (NR_027112, intron 5 of 12) -89078 NM_019599 50834 Hs.567492 NM_019599 HPRD:07267 TAS2R1 T2R1|TRB7 taste receptor, type 2, member 1 protein-coding Atac153_MAPQ30_peak_664 chr10 11730934 11730934 + 1.96283 NA Intergenic HAL1b|LINE|L1 -53422 NM_024693 79746 Hs.22242 NM_024693 HPRD:10930 ECHDC3 - enoyl CoA hydratase domain containing 3 protein-coding Atac153_MAPQ30_peak_1274 chr11 77356564 77356564 + 1.96283 NA Intergenic MER68-int|LTR|ERVL -7713 NM_001293 1207 Hs.430733 NM_001293 HPRD:03694 CLNS1A CLCI|CLNS1B|ICln chloride channel, nucleotide-sensitive, 1A protein-coding Atac153_MAPQ30_peak_710 chr10 34320558 34320558 + 1.96283 NA Intergenic Intergenic -258950 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA Atac153_MAPQ30_peak_7094 chrX 71249448 71249448 + 1.96283 NA intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) -14811 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo Atac153_MAPQ30_peak_994 chr10 130726434 130726434 + 1.96283 NA Intergenic Intergenic -539020 NM_002412 4255 Hs.501522 NM_002412 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding Atac153_MAPQ30_peak_2372 chr16 6607976 6607976 + 1.96283 NA intron (NM_018723, intron 2 of 15) intron (NM_018723, intron 2 of 15) -215834 NM_001142334 54715 Hs.459842 NM_018723 HPRD:16091 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding protein, fox-1 homolog (C. elegans) 1 protein-coding Atac153_MAPQ30_peak_2231 chr15 71617852 71617852 + 1.96283 NA intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -136454 NR_120350 101929196 Hs.680472 NR_120348 LOC101929196 - uncharacterized LOC101929196 ncRNA Atac153_MAPQ30_peak_5752 chr6 109120472 109120472 + 1.96283 NA Intergenic Intergenic 47615 NR_033376 387111 Hs.520310 NR_033376 ENSG00000203801 LINC00222 C6orf181|NCRNA00222|dJ354J5.2 long intergenic non-protein coding RNA 222 ncRNA Atac153_MAPQ30_peak_104 chr1 17490549 17490549 + 1.96283 NA Intergenic Intergenic -41072 NM_013358 29943 Hs.412941 NM_013358 HPRD:06395 PADI1 HPAD10|PAD1|PDI|PDI1 peptidyl arginine deiminase, type I protein-coding Atac153_MAPQ30_peak_3909 chr2 234930934 234930934 + 1.96283 NA Intergenic Intergenic -28412 NM_006944 6694 Hs.444488 NM_006944 HPRD:04029 SPP2 SPP-24|SPP24 secreted phosphoprotein 2, 24kDa protein-coding Atac153_MAPQ30_peak_4614 chr3 33427255 33427255 + 1.96283 NA 3' UTR (NM_001171713, exon 14 of 14) 3' UTR (NM_001171713, exon 14 of 14) 54615 NM_014517 7342 Hs.729120 NM_014517 HPRD:10291 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 (LBP-1a) protein-coding Atac153_MAPQ30_peak_557 chr1 227087578 227087578 + 1.96283 NA Intergenic MLT1J|LTR|ERVL-MaLR 29305 NM_000447 5664 Hs.25363 NM_000447 HPRD:02860 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding Atac153_MAPQ30_peak_3709 chr2 127542510 127542510 + 1.96283 NA Intergenic Intergenic 128999 NM_002101 2995 Hs.59138 NM_002101 HPRD:00193 GYPC CD236|CD236R|GE|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding Atac153_MAPQ30_peak_5453 chr5 151097913 151097913 + 1.96283 NA Intergenic Intergenic -31298 NM_003118 6678 Hs.111779 NM_003118 HPRD:01631 SPARC ON secreted protein, acidic, cysteine-rich (osteonectin) protein-coding Atac153_MAPQ30_peak_3456 chr2 23779030 23779030 + 1.96283 NA intron (NM_052920, intron 2 of 13) intron (NM_052920, intron 2 of 13) 170732 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch-like family member 29 protein-coding Atac153_MAPQ30_peak_2406 chr16 12530307 12530307 + 1.96283 NA intron (NM_032167, intron 18 of 20) intron (NM_032167, intron 18 of 20) -283871 NR_039869 100616195 NR_039869 miRBase:MI0017353 MIR4718 - microRNA 4718 ncRNA Atac153_MAPQ30_peak_3215 chr19 9046873 9046873 + 1.96283 NA exon (NM_024690, exon 5 of 84) exon (NM_024690, exon 5 of 84) 45145 NM_024690 94025 Hs.432676 NM_024690 ENSG00000181143 MUC16 CA125 mucin 16, cell surface associated protein-coding Atac153_MAPQ30_peak_2490 chr16 34810038 34810038 + 1.96283 NA Intergenic Intergenic -69198 NR_034018 100130700 Hs.97712 NR_034018 ENSG00000260857 LOC100130700 - uncharacterized LOC100130700 ncRNA Atac153_MAPQ30_peak_3414 chr2 11814413 11814413 + 1.96283 NA Intergenic Intergenic -3292 NM_001261428 23175 Hs.467740 NM_145693 HPRD:09271 LPIN1 PAP1 lipin 1 protein-coding Atac153_MAPQ30_peak_7068 chrX 64885929 64885929 + 1.96283 NA Intergenic AluSz|SINE|Alu -1582 NM_002444 4478 Hs.87752 NM_002444 HPRD:02399 MSN HEL70 moesin protein-coding Atac153_MAPQ30_peak_64 chr1 10613073 10613073 + 1.96283 NA intron (NM_004565, intron 3 of 8) intron (NM_004565, intron 3 of 8) 78070 NM_004565 5195 Hs.149983 NM_004565 HPRD:03477 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding Atac153_MAPQ30_peak_754 chr10 50164900 50164900 + 1.96283 NA intron (NM_020945, intron 51 of 61) intron (NM_020945, intron 51 of 61) 28732 NR_036182 100422895 NR_036182 miRBase:MI0015827 MIR4294 - microRNA 4294 ncRNA Atac153_MAPQ30_peak_2310 chr15 91447150 91447150 + 1.96283 NA promoter-TSS (NM_006122) promoter-TSS (NM_006122) -270 NM_006122 4122 Hs.116459 NM_006122 HPRD:02994 MAN2A2 MANA2X mannosidase, alpha, class 2A, member 2 protein-coding Atac153_MAPQ30_peak_2577 chr16 75512227 75512227 + 1.96283 NA 3' UTR (NM_021615, exon 3 of 3) 3' UTR (NM_021615, exon 3 of 3) -13643 NM_145254 124491 Hs.487510 NM_145254 HPRD:14027 TMEM170A TMEM170 transmembrane protein 170A protein-coding Atac153_MAPQ30_peak_5661 chr6 38183923 38183923 + 1.96283 NA intron (NM_001099272, intron 9 of 10) intron (NM_001099272, intron 9 of 10) 379920 NM_001172418 114781 Hs.603858 NM_052893 HPRD:12543 BTBD9 dJ322I12.1 BTB (POZ) domain containing 9 protein-coding Atac153_MAPQ30_peak_5866 chr6 169282123 169282123 + 1.96283 NA Intergenic Intergenic 372086 NM_003247 7058 Hs.371147 NM_003247 HPRD:01766 THBS2 TSP2 thrombospondin 2 protein-coding Atac153_MAPQ30_peak_4524 chr22 49918562 49918562 + 1.96283 NA intron (NR_110523, intron 1 of 4) (CA)n|Simple_repeat|Simple_repeat 132628 NR_110522 348645 Hs.133159 NM_198851 HPRD:14180 C22orf34 - chromosome 22 open reading frame 34 protein-coding Atac153_MAPQ30_peak_6312 chr8 22567094 22567094 + 1.96283 NA Intergenic (CAT)n|Simple_repeat|Simple_repeat -16279 NM_004430 1960 Hs.534313 NM_004430 HPRD:03881 EGR3 EGR-3|PILOT early growth response 3 protein-coding Atac153_MAPQ30_peak_1381 chr11 127239744 127239744 + 1.96283 NA Intergenic Intergenic 98779 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LOC101929497 - uncharacterized LOC101929497 ncRNA Atac153_MAPQ30_peak_1961 chr14 68398956 68398956 + 1.96283 NA intron (NM_133510, intron 7 of 10) L1M2|LINE|L1 112460 NM_133510 5890 Hs.172587 NM_002877 HPRD:04255 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding Atac153_MAPQ30_peak_6129 chr7 129441672 129441672 + 1.96283 NA Intergenic MER21C|LTR|ERVL -26818 NR_029615 406959 NR_029615 miRBase:MI0000273 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA Atac153_MAPQ30_peak_2533 chr16 65558805 65558805 + 1.96283 NA intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 51398 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA Atac153_MAPQ30_peak_6446 chr8 103599755 103599755 + 1.96283 NA Intergenic Intergenic 35907 NM_024410 4956 Hs.159274 NM_024410 HPRD:01687 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding Atac153_MAPQ30_peak_3231 chr19 13950231 13950231 + 1.96283 NA Intergenic Intergenic -2758 NR_029495 407010 NR_029495 miRBase:MI0000079 MIR23A MIRN23A|hsa-mir-23a|miRNA23A microRNA 23a ncRNA Atac153_MAPQ30_peak_7179 chrX 118637760 118637760 + 1.96283 NA Intergenic Intergenic -34677 NR_028443 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4437 chr22 37998208 37998208 + 1.96283 NA Intergenic Intergenic -6273 NM_001001561 26088 Hs.499158 NM_013365 HPRD:12078 GGA1 - golgi-associated, gamma adaptin ear containing, ARF binding protein 1 protein-coding Atac153_MAPQ30_peak_2312 chr15 91474639 91474639 + 1.96283 NA 3' UTR (NM_198527, exon 4 of 4) 3' UTR (NM_198527, exon 4 of 4) 1160 NM_001286451 374659 Hs.349979 NM_198527 HPRD:14635 HDDC3 (ppGpp)ase|MESH1 HD domain containing 3 protein-coding Atac153_MAPQ30_peak_24 chr1 4529528 4529528 + 1.96283 NA Intergenic MamRep434|DNA|TcMar-Tigger 57417 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LOC284661 - uncharacterized LOC284661 ncRNA Atac153_MAPQ30_peak_5001 chr4 7288557 7288557 + 1.96283 NA intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -23620 NR_039961 100616471 NR_039961 MIR4798 - microRNA 4798 ncRNA Atac153_MAPQ30_peak_4912 chr3 171871422 171871422 + 1.96283 NA intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 113078 NM_001135095 64778 Hs.744888 NM_022763 HPRD:10943 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding Atac153_MAPQ30_peak_7201 chrX 124816470 124816470 + 1.96283 NA Intergenic L1M1|LINE|L1 362501 NM_001195272 100129520 Hs.728728 NM_001195272 LOC100129520 - testis expressed sequence 13-like protein-coding Atac153_MAPQ30_peak_4200 chr20 59417843 59417843 + 1.96283 NA Intergenic Intergenic -236277 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LOC100506470 - uncharacterized LOC100506470 ncRNA Atac153_MAPQ30_peak_2244 chr15 74928404 74928404 + 1.96283 NA intron (NM_001142444, intron 6 of 7) intron (NM_001142444, intron 6 of 7) 21069 NM_001130028 1198 Hs.584748 NM_001292 HPRD:04290 CLK3 PHCLK3|PHCLK3/152 CDC-like kinase 3 protein-coding Atac153_MAPQ30_peak_2623 chr16 86614566 86614566 + 1.96283 NA 3' UTR (NM_005250, exon 1 of 1) 3' UTR (NM_005250, exon 1 of 1) 2451 NM_005250 2300 Hs.533830 NM_005250 HPRD:07219 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding Atac153_MAPQ30_peak_7208 chrX 130043748 130043748 + 1.96283 NA Intergenic Intergenic -6457 NM_006375 10495 Hs.171458 NM_006375 HPRD:02234 ENOX2 APK1|COVA1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding Atac153_MAPQ30_peak_6173 chr7 140125955 140125955 + 1.96283 NA TTS (NM_001008749) TTS (NM_001008749) 22112 NM_001008749 401409 Hs.583545 NM_001008749 HPRD:17946 RAB19 RAB19B RAB19, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_1856 chr13 101667537 101667537 + 1.96283 NA intron (NR_047687, intron 3 of 7) intron (NR_047687, intron 3 of 7) -70919 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA Atac153_MAPQ30_peak_3727 chr2 129819738 129819738 + 1.96283 NA Intergenic Intergenic 197564 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA Atac153_MAPQ30_peak_4951 chr3 197333454 197333454 + 1.96283 NA Intergenic Intergenic 21298 NR_003266 220729 Hs.478854 NR_003266 ENSG00000214135 LOC220729 - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene pseudo Atac153_MAPQ30_peak_216 chr1 40424369 40424369 + 1.96283 NA exon (NM_001136493, exon 3 of 14) exon (NM_001136493, exon 3 of 14) 3585 NM_032793 84879 Hs.655177 NM_032793 HPRD:07861 MFSD2A MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding Atac153_MAPQ30_peak_6902 chrX 9271290 9271290 + 1.96283 NA Intergenic Intergenic -160045 NM_001139468 6907 Hs.495656 NM_005647 HPRD:02183 TBL1X EBI|SMAP55|TBL1 transducin (beta)-like 1X-linked protein-coding Atac153_MAPQ30_peak_7282 chrX 151763466 151763466 + 1.96283 NA Intergenic L2c|LINE|L2 -43171 NM_018558 55879 Hs.283081 NM_018558 GABRQ THETA gamma-aminobutyric acid (GABA) A receptor, theta protein-coding Atac153_MAPQ30_peak_3011 chr18 9698769 9698769 + 1.96283 NA Intergenic Intergenic -9459 NM_006868 11031 Hs.99528 NM_006868 HPRD:05751 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding Atac153_MAPQ30_peak_7159 chrX 109664949 109664949 + 1.96283 NA intron (NM_020769, intron 1 of 3) intron (NM_020769, intron 1 of 3) 2664 NM_020769 57529 Hs.201071 NM_020769 HPRD:06600 RGAG1 MAR9|MART9 retrotransposon gag domain containing 1 protein-coding Atac153_MAPQ30_peak_1436 chr12 3542300 3542300 + 1.96283 NA intron (NM_001256536, intron 1 of 9) L1M5|LINE|L1 51785 NM_001256536 56341 Hs.504530 NM_019854 HPRD:11029 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding Atac153_MAPQ30_peak_4432 chr22 37121632 37121632 + 1.96283 NA Intergenic Intergenic -22942 NM_006078 10369 Hs.146766 NM_006078 CACNG2 MRD10 calcium channel, voltage-dependent, gamma subunit 2 protein-coding Atac153_MAPQ30_peak_1342 chr11 117465190 117465190 + 1.96283 NA intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 202786 NM_020693 57453 Hs.659513 NM_020693 HPRD:10921 DSCAML1 - Down syndrome cell adhesion molecule like 1 protein-coding Atac153_MAPQ30_peak_2501 chr16 49715302 49715302 + 1.96283 NA intron (NM_015069, intron 3 of 7) intron (NM_015069, intron 3 of 7) 141347 NM_015069 23090 Hs.530930 NM_015069 HPRD:05189 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104 zinc finger protein 423 protein-coding Atac153_MAPQ30_peak_2107 chr15 27373775 27373775 + 1.96283 NA intron (NM_033223, intron 3 of 9) intron (NM_033223, intron 3 of 9) 32691 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 LOC101928869 - uncharacterized LOC101928869 ncRNA Atac153_MAPQ30_peak_3084 chr18 45341507 45341507 + 1.96283 NA Intergenic LTR81C|LTR|Gypsy 115463 NM_005901 4087 Hs.12253 NM_005901 HPRD:03221 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding Atac153_MAPQ30_peak_1785 chr13 30315825 30315825 + 1.96283 NA Intergenic Intergenic 108995 NM_007106 5412 Hs.145575 NM_007106 HPRD:05275 UBL3 HCG-1|PNSC1 ubiquitin-like 3 protein-coding Atac153_MAPQ30_peak_3123 chr18 57313989 57313989 + 1.96283 NA intron (NM_133459, intron 2 of 10) L4|LINE|RTE 50655 NM_133459 147372 Hs.34333 NM_133459 HPRD:08703 CCBE1 - collagen and calcium binding EGF domains 1 protein-coding Atac153_MAPQ30_peak_3891 chr2 228616189 228616189 + 1.96283 NA Intergenic AluSx1|SINE|Alu -33444 NM_025243 80704 Hs.221597 NM_025243 HPRD:07311 SLC19A3 BBGD|THMD2|THTR2 solute carrier family 19 (thiamine transporter), member 3 protein-coding Atac153_MAPQ30_peak_6798 chr9 126138125 126138125 + 1.96283 NA intron (NR_104603, intron 7 of 8) intron (NR_104603, intron 7 of 8) 7067 NR_104603 286204 Hs.568340 NM_173689 HPRD:13093 CRB2 - crumbs family member 2 protein-coding Atac153_MAPQ30_peak_3314 chr19 42947149 42947149 + 1.96283 NA promoter-TSS (NM_198477) promoter-TSS (NM_198477) -13 NM_198477 284340 Hs.445586 NM_198477 CXCL17 DMC|Dcip1|UNQ473|VCC-1|VCC1 chemokine (C-X-C motif) ligand 17 protein-coding Atac153_MAPQ30_peak_1282 chr11 79083729 79083729 + 1.96283 NA intron (NM_001098816, intron 1 of 33) MIRb|SINE|MIR 29424 NR_030598 100126333 NR_030598 miRBase:MI0005543 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA Atac153_MAPQ30_peak_1489 chr12 33180430 33180430 + 1.96283 NA Intergenic MLT1J2-int|LTR|ERVL-MaLR -130650 NM_001005242 5318 Hs.164384 NM_004572 HPRD:04177 PKP2 ARVD9 plakophilin 2 protein-coding Atac153_MAPQ30_peak_4181 chr20 56277170 56277170 + 1.96283 NA intron (NM_199171, intron 1 of 3) L2a|LINE|L2 7861 NM_020182 56937 Hs.517155 NM_020182 HPRD:09415 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding Atac153_MAPQ30_peak_3632 chr2 97582350 97582350 + 1.96283 NA intron (NM_001122646, intron 12 of 16) intron (NM_001122646, intron 12 of 16) -2493 NR_110209 101927053 Hs.677537 NR_110209 LOC101927053 - uncharacterized LOC101927053 ncRNA Atac153_MAPQ30_peak_4810 chr3 124408758 124408758 + 1.96283 NA intron (NM_001024660, intron 51 of 59) intron (NM_001024660, intron 51 of 59) -40455 NM_000373 7372 Hs.2057 NM_000373 UMPS OPRT uridine monophosphate synthetase protein-coding Atac153_MAPQ30_peak_5118 chr4 87849261 87849261 + 1.96283 NA intron (NR_038841, intron 2 of 2) MIRb|SINE|MIR 6741 NR_038841 100506746 Hs.657766 NR_038841 ENSG00000163633 LOC100506746 - uncharacterized LOC100506746 ncRNA Atac153_MAPQ30_peak_1311 chr11 110168721 110168721 + 1.96283 NA Intergenic Intergenic -1284 NM_002906 5962 Hs.263671 NM_002906 HPRD:01534 RDX DFNB24 radixin protein-coding Atac153_MAPQ30_peak_1851 chr13 99121144 99121144 + 1.96283 NA intron (NM_001286649, intron 4 of 9) L1MA4|LINE|L1 53235 NM_003576 8428 Hs.508514 NM_003576 HPRD:10385 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding Atac153_MAPQ30_peak_1441 chr12 4390105 4390105 + 1.96283 NA intron (NM_001759, intron 3 of 4) intron (NM_001759, intron 3 of 4) -4755 NR_125790 103752584 Hs.577711 NR_125790 CCND2-AS1 - CCND2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_6793 chr9 124471855 124471855 + 1.96283 NA intron (NM_032552, intron 3 of 16) MIR|SINE|MIR -33209 NM_138709 153090 Hs.522378 NM_032552 HPRD:09903 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding Atac153_MAPQ30_peak_2518 chr16 56603847 56603847 + 1.96283 NA TTS (NM_032935) TTS (NM_032935) 4886 NM_032935 84560 Hs.567624 NM_032935 HPRD:12092 MT4 MT-4|MT-IV|MTIV metallothionein 4 protein-coding Atac153_MAPQ30_peak_6881 chrX 1537240 1537240 + 1.96283 NA intron (NM_001173473, intron 10 of 12) MLT1J|LTR|ERVL-MaLR 17816 NR_026711 80161 Hs.521856 NM_025091 ASMTL-AS1 ASMTL-AS|ASMTLAS|CXYorf2|NCRNA00105 ASMTL antisense RNA 1 ncRNA Atac153_MAPQ30_peak_3298 chr19 38794383 38794383 + 1.96283 NA promoter-TSS (NM_033520) promoter-TSS (NM_033520) -421 NM_033520 64073 Hs.631544 NM_022125 HPRD:12706 C19orf33 H2RSP|IMUP|IMUP-1|IMUP-2 chromosome 19 open reading frame 33 protein-coding Atac153_MAPQ30_peak_6482 chr8 128932322 128932322 + 1.96283 NA intron (NR_003367, intron 1 of 7) intron (NR_003367, intron 1 of 7) 28647 NR_103558 641384 Hs.629674 NM_001037234 TMEM75 - transmembrane protein 75 ncRNA Atac153_MAPQ30_peak_874 chr10 101246455 101246455 + 1.96283 NA Intergenic Intergenic 44479 NR_120618 101927324 Hs.642588 NR_120618 ENSG00000257582 LINC01475 - long intergenic non-protein coding RNA 1475 ncRNA Atac153_MAPQ30_peak_2270 chr15 78685725 78685725 + 1.96283 NA Intergenic AluJo|SINE|Alu -44793 NM_004136 3658 Hs.436031 NM_004136 HPRD:08858 IREB2 ACO3|IRP2|IRP2AD iron-responsive element binding protein 2 protein-coding Atac153_MAPQ30_peak_2434 chr16 21539106 21539106 + 1.96283 NA Intergenic Intergenic -7341 NR_002594 387254 Hs.448808 NR_002594 SLC7A5P2 IMAA|MMAA solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2 pseudo Atac153_MAPQ30_peak_5992 chr7 47441655 47441655 + 1.96283 NA intron (NM_022748, intron 13 of 30) intron (NM_022748, intron 13 of 30) 180087 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding Atac153_MAPQ30_peak_6074 chr7 94762024 94762024 + 1.96283 NA intron (NM_017650, intron 4 of 15) MER52A|LTR|ERV1 191860 NM_000446 5444 Hs.370995 NM_000446 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding Atac153_MAPQ30_peak_6123 chr7 127996717 127996717 + 1.96283 NA intron (NM_001174164, intron 5 of 5) intron (NM_001174164, intron 5 of 5) 5022 NM_001174164 401399 Hs.381096 NM_001114726 ENSG00000224940 PRRT4 - proline-rich transmembrane protein 4 protein-coding Atac153_MAPQ30_peak_1044 chr11 3171218 3171218 + 1.96283 NA intron (NM_145638, intron 1 of 20) (CA)n|Simple_repeat|Simple_repeat 15364 NM_020896 114879 Hs.436166 NM_020896 HPRD:09475 OSBPL5 OBPH1|ORP5 oxysterol binding protein-like 5 protein-coding Atac153_MAPQ30_peak_6217 chr7 155960825 155960825 + 1.96283 NA Intergenic Intergenic 205499 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding Atac153_MAPQ30_peak_6095 chr7 101561397 101561397 + 1.96283 NA intron (NM_001202544, intron 2 of 21) intron (NM_001202544, intron 2 of 21) 100515 NM_181552 1523 Hs.191482 NM_001913 HPRD:00295 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GOLIM6|Nbla10317|p100|p110|p200|p75 cut-like homeobox 1 protein-coding Atac153_MAPQ30_peak_5514 chr5 175268080 175268080 + 1.96283 NA intron (NM_006650, intron 2 of 4) intron (NM_006650, intron 2 of 4) -30421 NM_001008220 10814 Hs.193235 NM_006650 HPRD:09234 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding Atac153_MAPQ30_peak_4172 chr20 55485496 55485496 + 1.96283 NA Intergenic Intergenic 281138 NM_003222 7022 Hs.473152 NM_003222 HPRD:03361 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) protein-coding Atac153_MAPQ30_peak_3741 chr2 133018866 133018866 + 1.96283 NA Intergenic Intergenic -3324 NR_027020 554226 Hs.380689 NR_027019 ENSG00000163046 ANKRD30BL ANKRD30BP3|NCRNA00164 ankyrin repeat domain 30B-like pseudo Atac153_MAPQ30_peak_4048 chr20 24823389 24823389 + 1.96283 NA Intergenic Intergenic -106477 NM_003650 8530 Hs.143212 NM_003650 HPRD:04458 CST7 CMAP cystatin F (leukocystatin) protein-coding Atac153_MAPQ30_peak_6817 chr9 131476498 131476498 + 1.96283 NA exon (NM_013355, exon 11 of 22) exon (NM_013355, exon 11 of 22) 9910 NM_032799 84885 Hs.133122 NM_032799 HPRD:15709 ZDHHC12 ZNF400 zinc finger, DHHC-type containing 12 protein-coding Atac153_MAPQ30_peak_6037 chr7 67053191 67053191 + 1.96283 NA Intergenic MLT1G1|LTR|ERVL-MaLR 252228 NR_108104 101929736 Hs.634050 NR_108104 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA Atac153_MAPQ30_peak_495 chr1 204542949 204542949 + 1.96283 NA Intergenic Intergenic 57442 NM_001278517 4194 Hs.497492 NM_002393 HPRD:04082 MDM4 HDMX|MDMX|MRP1 MDM4, p53 regulator protein-coding Atac153_MAPQ30_peak_6937 chrX 19360707 19360707 + 1.96283 NA Intergenic L3|LINE|CR1 -1304 NM_001173455 5160 Hs.530331 NM_000284 HPRD:02420 PDHA1 PDHA|PDHCE1A|PHE1A pyruvate dehydrogenase (lipoamide) alpha 1 protein-coding Atac153_MAPQ30_peak_6789 chr9 123624928 123624928 + 1.96283 NA exon (NM_015651, exon 11 of 15) exon (NM_015651, exon 11 of 15) 6261 NR_104601 26147 Hs.460124 NM_015651 HPRD:17846 PHF19 MTF2L1|PCL3|TDRD19B PHD finger protein 19 protein-coding Atac153_MAPQ30_peak_5951 chr7 31035816 31035816 + 1.96283 NA Intergenic Intergenic 32180 NM_000823 2692 Hs.767 NM_000823 HPRD:00748 GHRHR GHRFR|GRFR|IGHD1B growth hormone releasing hormone receptor protein-coding Atac153_MAPQ30_peak_5365 chr5 106943890 106943890 + 1.96283 NA intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 62706 NM_001962 1946 Hs.288741 NM_001962 HPRD:03324 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin-A5 protein-coding Atac153_MAPQ30_peak_944 chr10 124088825 124088825 + 1.96283 NA intron (NM_144587, intron 10 of 15) intron (NM_144587, intron 10 of 15) -45269 NM_001001974 59338 Hs.643512 NM_021622 HPRD:09686 PLEKHA1 TAPP1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 protein-coding Atac153_MAPQ30_peak_200 chr1 37152591 37152591 + 1.96283 NA Intergenic Intergenic -203676 NM_156039 1441 Hs.524517 NM_000760 HPRD:00737 CSF3R CD114|GCSFR colony stimulating factor 3 receptor (granulocyte) protein-coding Atac153_MAPQ30_peak_2457 chr16 27067166 27067166 + 1.96283 NA Intergenic LTR16E1|LTR|ERVL -11053 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding Atac153_MAPQ30_peak_5135 chr4 108015742 108015742 + 1.96283 NA Intergenic L1P4a|LINE|L1 -58289 NM_014421 27123 Hs.211869 NM_014421 HPRD:05658 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding Atac153_MAPQ30_peak_3829 chr2 201377942 201377942 + 1.96283 NA Intergenic L2b|LINE|L2 -3150 NM_152387 130535 Hs.605775 NM_152387 HPRD:08098 KCTD18 6530404F10Rik potassium channel tetramerization domain containing 18 protein-coding Atac153_MAPQ30_peak_1028 chr10 134911959 134911959 + 1.96283 NA intron (NM_001083909, intron 3 of 6) intron (NM_001083909, intron 3 of 6) -3791 NM_001291085 84435 Hs.435183 NM_032422 HPRD:17058 GPR123 - G protein-coupled receptor 123 protein-coding Atac153_MAPQ30_peak_3396 chr2 6805491 6805491 + 1.96283 NA Intergenic MIR|SINE|MIR -14840 NR_110497 102800314 Hs.258100 NR_110497 MIR7515HG - MIR7515 host gene (non-protein coding) ncRNA Atac153_MAPQ30_peak_4785 chr3 110685749 110685749 + 1.96283 NA Intergenic HERVI-int|LTR|ERV1 103057 NR_045114 100506555 Hs.535689 NR_045114 PVRL3-AS1 - PVRL3 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_4380 chr22 28075644 28075644 + 1.96283 NA Intergenic L3|LINE|CR1 121842 NM_002430 4330 Hs.268515 NM_002430 HPRD:08862 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 meningioma (disrupted in balanced translocation) 1 protein-coding Atac153_MAPQ30_peak_2246 chr15 75188638 75188638 + 1.96283 NA exon (NM_001289156, exon 5 of 7) exon (NM_001289156, exon 5 of 7) 6286 NM_001289157 4351 Hs.75694 NM_002435 HPRD:01108 MPI CDG1B|PMI|PMI1 mannose phosphate isomerase protein-coding Atac153_MAPQ30_peak_4678 chr3 50276823 50276823 + 1.96283 NA intron (NM_001282618, intron 1 of 7) intron (NM_001282618, intron 1 of 7) 3234 NM_001282618 2771 Hs.77269 NM_002070 HPRD:00764 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 protein-coding Atac153_MAPQ30_peak_4900 chr3 159567766 159567766 + 1.96283 NA intron (NM_001197109, intron 1 of 6) L2a|LINE|L2 10116 NM_001197109 29970 Hs.134665 NM_014575 HPRD:15302 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding Atac153_MAPQ30_peak_2262 chr15 77326328 77326328 + 1.96283 NA intron (NM_003978, intron 12 of 14) intron (NM_003978, intron 12 of 14) 37242 NM_001168412 10099 Hs.744863 NM_005724 HPRD:15512 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding Atac153_MAPQ30_peak_6630 chr9 71108857 71108857 + 1.96283 NA intron (NM_021965, intron 9 of 10) intron (NM_021965, intron 9 of 10) 46926 NM_153237 169693 Hs.663056 NM_153237 HPRD:18569 TMEM252 C9orf71 transmembrane protein 252 protein-coding Atac153_MAPQ30_peak_1231 chr11 66136513 66136513 + 1.96283 NA intron (NM_001300868, intron 6 of 13) intron (NM_001300868, intron 6 of 13) 2778 NM_001532 3177 Hs.569017 NM_001532 HPRD:03662 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 (equilibrative nucleoside transporter), member 2 protein-coding Atac153_MAPQ30_peak_2302 chr15 89038052 89038052 + 1.96283 NA Intergenic Intergenic 27368 NM_176805 64963 Hs.111286 NM_022839 HPRD:14776 MRPS11 HCC-2 mitochondrial ribosomal protein S11 protein-coding Atac153_MAPQ30_peak_5018 chr4 9875350 9875350 + 1.96283 NA intron (NM_001001290, intron 11 of 12) MLT1H|LTR|ERVL-MaLR 92092 NM_000798 1816 Hs.380681 NM_000798 HPRD:00542 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding Atac153_MAPQ30_peak_632 chr10 726469 726469 + 1.96283 NA intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) 9139 NM_014974 22982 Hs.432397 NM_014974 HPRD:17200 DIP2C KIAA0934 DIP2 disco-interacting protein 2 homolog C (Drosophila) protein-coding Atac153_MAPQ30_peak_611 chr1 243034229 243034229 + 1.96283 NA Intergenic Intergenic 230817 NR_029401 731275 Hs.722350 NR_029401 LINC01347 - long intergenic non-protein coding RNA 1347 ncRNA Atac153_MAPQ30_peak_3543 chr2 56347410 56347410 + 1.96283 NA Intergenic Intergenic -63848 NM_001080433 114800 Hs.117136 NM_001080433 ENSG00000055813 CCDC85A - coiled-coil domain containing 85A protein-coding Atac153_MAPQ30_peak_5998 chr7 50250533 50250533 + 1.96283 NA Intergenic Intergenic -93146 NM_001291839 10320 Hs.435949 NM_006060 HPRD:04318 IKZF1 Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 (Ikaros) protein-coding Atac153_MAPQ30_peak_5402 chr5 133063833 133063833 + 1.96283 NA Intergenic Intergenic -115610 NM_015082 23105 Hs.483390 NM_015082 HPRD:17022 FSTL4 - follistatin-like 4 protein-coding Atac153_MAPQ30_peak_3346 chr19 52957889 52957889 + 1.96283 NA intron (NM_001099694, intron 1 of 5) MER21B|LTR|ERVL 1060 NM_001099694 147660 Hs.157287 NM_152472 HPRD:15857 ZNF578 - zinc finger protein 578 protein-coding Atac153_MAPQ30_peak_3721 chr2 129152188 129152188 + 1.96283 NA Intergenic MIRc|SINE|MIR -76017 NM_004807 9394 Hs.512841 NM_004807 HPRD:07274 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding Atac153_MAPQ30_peak_2093 chr14 106329188 106329188 + 1.96283 NA Intergenic Intergenic -54650 NR_026800 9834 Hs.649259 NM_014151 KIAA0125 C14orf110|FAM30A KIAA0125 ncRNA Atac153_MAPQ30_peak_4624 chr3 37495573 37495573 + 1.96283 NA intron (NM_002207, intron 1 of 27) intron (NM_002207, intron 1 of 27) 1760 NM_002207 3680 Hs.113157 NM_002207 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin, alpha 9 protein-coding Atac153_MAPQ30_peak_3383 chr2 2843635 2843635 + 1.96283 NA Intergenic Intergenic 286163 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA Atac153_MAPQ30_peak_5779 chr6 128951276 128951276 + 1.96283 NA Intergenic Intergenic -109457 NM_001291984 5796 Hs.155919 NM_002844 HPRD:03968 PTPRK R-PTP-kappa protein tyrosine phosphatase, receptor type, K protein-coding Atac153_MAPQ30_peak_6309 chr8 21590408 21590408 + 1.96283 NA intron (NM_001165038, intron 3 of 7) intron (NM_001165038, intron 3 of 7) 55938 NM_001495 2675 Hs.441202 NM_001495 HPRD:11801 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding Atac153_MAPQ30_peak_1129 chr11 29853675 29853675 + 1.96283 NA Intergenic THE1B-int|LTR|ERVL-MaLR 184902 NM_002233 3739 Hs.592002 NM_002233 HPRD:01444 KCNA4 HBK4|HK1|HPCN2|HUKII|KCNA4L|KCNA8|KV1.4|PCN2 potassium voltage-gated channel, shaker-related subfamily, member 4 protein-coding Atac153_MAPQ30_peak_4457 chr22 42339838 42339838 + 1.96283 NA intron (NM_024053, intron 4 of 5) MIRc|SINE|MIR 3310 NM_001002876 79019 Hs.208912 NM_024053 HPRD:12798 CENPM C22orf18|CENP-M|PANE1|bK250D10.2 centromere protein M protein-coding Atac153_MAPQ30_peak_718 chr10 37968547 37968547 + 1.96283 NA Intergenic Intergenic -76688 NM_001190489 100288485 Hs.727092 NM_001190489 ENSG00000256892 MTRNR2L7 HN7 MT-RNR2-like 7 protein-coding Atac153_MAPQ30_peak_1077 chr11 9495560 9495560 + 1.96283 NA exon (NM_003442, exon 4 of 16) exon (NM_003442, exon 4 of 16) 13048 NM_001282656 7702 Hs.523471 NM_003442 HPRD:04578 ZNF143 SBF|STAF|pHZ-1 zinc finger protein 143 protein-coding Atac153_MAPQ30_peak_3095 chr18 46519282 46519282 + 1.96283 NA Intergenic L2c|LINE|L2 -42201 NM_001190821 4092 Hs.465087 NM_005904 HPRD:04241 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding Atac153_MAPQ30_peak_347 chr1 117240869 117240869 + 1.96283 NA intron (NM_001013643, intron 2 of 3) intron (NM_001013643, intron 2 of 3) 4135 NM_001013643 388667 Hs.127851 NM_001013643 HPRD:18385 C1orf137 - chromosome 1 open reading frame 137 protein-coding Atac153_MAPQ30_peak_3506 chr2 40453520 40453520 + 1.96283 NA intron (NM_001112800, intron 1 of 8) intron (NM_001112800, intron 1 of 8) 203924 NM_001112801 6546 Hs.31961 NM_021097 HPRD:01659 SLC8A1 NCX1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein-coding Atac153_MAPQ30_peak_4504 chr22 48136754 48136754 + 1.96283 NA intron (NR_122046, intron 8 of 8) intron (NR_122046, intron 8 of 8) 109331 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA Atac153_MAPQ30_peak_373 chr1 152487294 152487294 + 1.96283 NA intron (NM_019060, intron 1 of 1) intron (NM_019060, intron 1 of 1) 316 NM_019060 54544 Hs.110196 NM_019060 HPRD:16635 CRCT1 C1orf42|NICE-1 cysteine-rich C-terminal 1 protein-coding Atac153_MAPQ30_peak_7172 chrX 116151648 116151648 + 1.96283 NA Intergenic L1PA15-16|LINE|L1 -557454 NM_001017978 203413 Hs.97892 NM_001017978 HPRD:18577 CT83 CXorf61|KK-LC-1|KKLC1 cancer/testis antigen 83 protein-coding Atac153_MAPQ30_peak_6007 chr7 51014550 51014550 + 1.96283 NA Intergenic L1M2a|LINE|L1 -153391 NM_001001555 2887 Hs.164060 NM_005311 HPRD:03312 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor-bound protein 10 protein-coding Atac153_MAPQ30_peak_3316 chr19 44231340 44231340 + 1.96283 NA Intergenic Intergenic 11126 NM_019612 56269 Hs.515444 NM_019612 HPRD:15200 IRGC CINEMA|IFGGE|IRGC1|Iigp5|R30953_1 immunity-related GTPase family, cinema protein-coding Atac153_MAPQ30_peak_5754 chr6 109725765 109725765 + 1.96283 NA intron (NM_001111298, intron 6 of 8) intron (NM_001111298, intron 6 of 8) -22003 NM_001142401 8763 Hs.520313 NM_006016 HPRD:04523 CD164 MGC-24|MUC-24|endolyn CD164 molecule, sialomucin protein-coding Atac153_MAPQ30_peak_6436 chr8 98935181 98935181 + 1.96283 NA intron (NM_002380, intron 2 of 18) intron (NM_002380, intron 2 of 18) 53870 NM_002380 4147 Hs.189445 NM_002380 HPRD:03660 MATN2 - matrilin 2 protein-coding Atac153_MAPQ30_peak_1225 chr11 65264872 65264872 + 1.96283 NA promoter-TSS (NR_002819) promoter-TSS (NR_002819) -361 NR_002819 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|MALAT-1|NCRNA00047|NEAT2|PRO2853|mascRNA metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) ncRNA Atac153_MAPQ30_peak_2633 chr16 88111422 88111422 + 1.96283 NA TTS (NM_001173542) TTS (NM_001173542) 23169 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA Atac153_MAPQ30_peak_1035 chr11 477368 477368 + 1.96283 NA intron (NM_030783, intron 3 of 11) intron (NM_030783, intron 3 of 11) 27088 NM_030783 81490 Hs.731700 NM_030783 HPRD:17927 PTDSS2 PSS2 phosphatidylserine synthase 2 protein-coding Atac153_MAPQ30_peak_2963 chr17 78934823 78934823 + 1.96283 NA intron (NM_020761, intron 30 of 33) intron (NM_020761, intron 30 of 33) -30818 NM_024591 79643 Hs.514560 NM_024591 HPRD:08564 CHMP6 VPS20 charged multivesicular body protein 6 protein-coding Atac153_MAPQ30_peak_214 chr1 40159447 40159447 + 1.96283 NA Intergenic Intergenic -2065 NM_016257 51440 Hs.743975 NM_016257 HPRD:17113 HPCAL4 HLP4 hippocalcin like 4 protein-coding Atac153_MAPQ30_peak_3847 chr2 207929137 207929137 + 1.96283 NA Intergenic Intergenic 45660 NR_036227 100423036 NR_036227 MIR2355 - microRNA 2355 ncRNA Atac153_MAPQ30_peak_3670 chr2 109964637 109964637 + 1.96283 NA intron (NM_001099289, intron 2 of 9) intron (NM_001099289, intron 2 of 9) -34556 NR_036224 100423027 NR_036224 miRBase:MI0015870 MIR4266 - microRNA 4266 ncRNA Atac153_MAPQ30_peak_456 chr1 183183738 183183738 + 1.96283 NA intron (NM_018891, intron 2 of 21) L2a|LINE|L2 28564 NM_018891 3918 Hs.591484 NM_005562 HPRD:01031 LAMC2 B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2 laminin, gamma 2 protein-coding Atac153_MAPQ30_peak_3249 chr19 19592090 19592090 + 1.96283 NA intron (NM_001300946, intron 1 of 10) intron (NM_001300946, intron 1 of 10) 15941 NM_001300946 54815 Hs.118964 NM_017660 HPRD:11741 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding Atac153_MAPQ30_peak_1065 chr11 7672392 7672392 + 1.96283 NA intron (NM_001256568, intron 19 of 20) intron (NM_001256568, intron 19 of 20) 22429 NM_016229 51700 Hs.414362 NM_016229 HPRD:06435 CYB5R2 B5R.2 cytochrome b5 reductase 2 protein-coding Atac153_MAPQ30_peak_1420 chr12 696030 696030 + 1.96283 NA intron (NM_016533, intron 1 of 3) intron (NM_016533, intron 1 of 3) 23549 NM_001294345 4815 Hs.655804 NM_016533 HPRD:09530 NINJ2 - ninjurin 2 protein-coding Atac153_MAPQ30_peak_3756 chr2 135422072 135422072 + 1.96283 NA intron (NM_030923, intron 2 of 7) MLT1D|LTR|ERVL-MaLR 54499 NM_030923 81615 Hs.369471 NM_030923 HPRD:13178 TMEM163 DC29|SV31 transmembrane protein 163 protein-coding Atac153_MAPQ30_peak_4575 chr3 13789709 13789709 + 1.96283 NA Intergenic MIRb|SINE|MIR 97488 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA Atac153_MAPQ30_peak_786 chr10 72261961 72261961 + 1.96283 NA intron (NM_014431, intron 1 of 19) L1ME3A|LINE|L1 23397 NM_014431 27143 Hs.202351 NM_014431 HPRD:11419 PALD1 KIAA1274|PALD phosphatase domain containing, paladin 1 protein-coding Atac153_MAPQ30_peak_3050 chr18 34336446 34336446 + 1.96283 NA intron (NM_001281739, intron 21 of 23) intron (NM_001281739, intron 21 of 23) -72634 NM_020776 57536 Hs.4045 NM_020776 HPRD:17211 KIAA1328 - KIAA1328 protein-coding Atac153_MAPQ30_peak_4605 chr3 31139563 31139563 + 1.96283 NA Intergenic Intergenic -203410 NM_207359 339896 Hs.657052 NM_207359 HPRD:13557 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase-like 1 protein-coding Atac153_MAPQ30_peak_2583 chr16 78867705 78867705 + 1.96283 NA intron (NM_001291997, intron 7 of 7) MIRb|SINE|MIR 734395 NR_120435 51741 Hs.461453 NM_016373 HPRD:05501 WWOX D16S432E|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding Atac153_MAPQ30_peak_5634 chr6 31549503 31549503 + 1.96283 NA intron (NM_009588, intron 1 of 2).5 intron (NM_009588, intron 1 of 2).5 699 NM_002341 4050 Hs.376208 NM_002341 HPRD:02987 LTB TNFC|TNFSF3|p33 lymphotoxin beta (TNF superfamily, member 3) protein-coding Atac153_MAPQ30_peak_5605 chr6 17586392 17586392 + 1.96283 NA Intergenic Intergenic -14126 NM_016255 51439 Hs.95260 NM_016255 HPRD:13316 FAM8A1 AHCP family with sequence similarity 8, member A1 protein-coding Atac153_MAPQ30_peak_2887 chr17 61519503 61519503 + 1.96283 NA intron (NM_001915, intron 1 of 5) intron (NM_001915, intron 1 of 5) -1296 NM_001017917 1534 Hs.355264 NM_001915 HPRD:02485 CYB561 CYB561A1|FRRS2 cytochrome b561 protein-coding Atac153_MAPQ30_peak_5466 chr5 155913103 155913103 + 1.96283 NA intron (NM_001128209, intron 2 of 7) L1M2|LINE|L1 159336 NM_000337 6444 Hs.387207 NM_000337 HPRD:03246 SGCD 35DAG|CMD1L|DAGD|SG-delta|SGCDP|SGD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) protein-coding Atac153_MAPQ30_peak_1904 chr14 25263029 25263029 + 1.96283 NA Intergenic Intergenic -159597 NM_004131 3002 Hs.1051 NM_004131 HPRD:00476 GZMB CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) protein-coding Atac153_MAPQ30_peak_1943 chr14 62230314 62230314 + 1.96283 NA intron (NM_003082, intron 1 of 9) L2c|LINE|L2 1239 NM_003082 6617 Hs.179312 NM_003082 HPRD:08998 SNAPC1 PTFgamma|SNAP43 small nuclear RNA activating complex, polypeptide 1, 43kDa protein-coding Atac153_MAPQ30_peak_7167 chrX 114574668 114574668 + 1.96283 NA Intergenic Intergenic 50385 NM_016383 51213 Hs.242183 NM_016383 HPRD:06589 LUZP4 CT-28|CT-8|CT28|HOM-TES-85 leucine zipper protein 4 protein-coding Atac153_MAPQ30_peak_6384 chr8 55491966 55491966 + 1.96283 NA Intergenic Intergenic -36661 NM_006269 6101 Hs.732820 NM_006269 HPRD:04896 RP1 DCDC4A|ORP1 retinitis pigmentosa 1 (autosomal dominant) protein-coding Atac153_MAPQ30_peak_3840 chr2 206609469 206609469 + 1.96283 NA intron (NM_003872, intron 9 of 16) intron (NM_003872, intron 9 of 16) 62245 NM_201264 8828 Hs.471200 NM_003872 HPRD:03643 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding Atac153_MAPQ30_peak_1952 chr14 65186792 65186792 + 1.96283 NA intron (NM_015549, intron 1 of 14) intron (NM_015549, intron 1 of 14) 15599 NM_015549 26030 Hs.509637 NM_015549 HPRD:17861 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein-coding Atac153_MAPQ30_peak_4157 chr20 50238474 50238474 + 1.96283 NA intron (NM_006045, intron 19 of 27) intron (NM_006045, intron 19 of 27) -59104 NM_001258294 4773 Hs.744148 NM_012340 HPRD:02730 NFATC2 NFAT1|NFATP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 protein-coding Atac153_MAPQ30_peak_2086 chr14 104662632 104662632 + 1.96283 NA Intergenic MER63D|DNA|hAT-Blackjack 57572 NM_015656 26153 Hs.134970 NM_015656 ENSG00000066735 KIF26A - kinesin family member 26A protein-coding Atac153_MAPQ30_peak_2719 chr17 15021347 15021347 + 1.96283 NA Intergenic Intergenic -11843 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA Atac153_MAPQ30_peak_4557 chr3 10942527 10942527 + 1.96283 NA intron (NM_014229, intron 6 of 13) intron (NM_014229, intron 6 of 13) 84610 NM_014229 6538 Hs.657405 NM_014229 SLC6A11 GAT-3|GAT3|GAT4 solute carrier family 6 (neurotransmitter transporter), member 11 protein-coding Atac153_MAPQ30_peak_2125 chr15 31630849 31630849 + 1.96283 NA intron (NM_015995, intron 1 of 1) intron (NM_015995, intron 1 of 1) 11766 NM_015995 51621 Hs.525752 NM_015995 HPRD:05620 KLF13 BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 protein-coding Atac153_MAPQ30_peak_3988 chr20 4729009 4729009 + 1.96283 NA Intergenic LTR16C|LTR|ERVL -7695 NR_024267 149830 Hs.126516 NM_177549 HPRD:14086 PRNT M8 prion protein (testis specific) ncRNA Atac153_MAPQ30_peak_891 chr10 105523375 105523375 + 1.96283 NA intron (NM_014631, intron 3 of 13) intron (NM_014631, intron 3 of 13) 16838 NR_038940 100505839 Hs.655149 NR_038940 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2201 chr15 66482359 66482359 + 1.96283 NA intron (NM_032445, intron 1 of 22) MER5B|DNA|hAT-Charlie 63716 NM_032445 84465 Hs.712886 NM_032445 HPRD:14385 MEGF11 - multiple EGF-like-domains 11 protein-coding Atac153_MAPQ30_peak_6458 chr8 114445773 114445773 + 1.96283 NA intron (NM_198123, intron 1 of 70) intron (NM_198123, intron 1 of 70) 3469 NM_052900 114788 Hs.91381 NM_052900 HPRD:16329 CSMD3 - CUB and Sushi multiple domains 3 protein-coding Atac153_MAPQ30_peak_2016 chr14 89416333 89416333 + 1.96283 NA Intergenic Intergenic 125836 NM_001288782 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding Atac153_MAPQ30_peak_3085 chr18 45571272 45571272 + 1.96283 NA intron (NM_001039360, intron 1 of 2) MIR|SINE|MIR 92408 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding Atac153_MAPQ30_peak_5333 chr5 73468846 73468846 + 1.96283 NA Intergenic LTR85c|LTR|Gypsy? 135304 NR_105009 102503429 Hs.519391 NR_105009 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA Atac153_MAPQ30_peak_5343 chr5 77162140 77162140 + 1.96283 NA Intergenic Intergenic -18340 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA Atac153_MAPQ30_peak_3931 chr2 238351127 238351127 + 1.96283 NA Intergenic Intergenic -28277 NM_057166 1293 Hs.233240 NM_004369 HPRD:00371 COL6A3 - collagen, type VI, alpha 3 protein-coding Atac153_MAPQ30_peak_5344 chr5 78281794 78281794 + 1.96283 NA promoter-TSS (NM_198709) promoter-TSS (NM_198709) -28 NM_198709 411 Hs.149103 NM_000046 HPRD:08358 ARSB ASB|G4S|MPS6 arylsulfatase B protein-coding Atac153_MAPQ30_peak_6935 chrX 18927204 18927204 + 1.96283 NA intron (NM_000292, intron 20 of 32) intron (NM_000292, intron 20 of 32) 18790 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA Atac153_MAPQ30_peak_7313 chrY 58994610 58994610 + 1.94662 NA Intergenic BSR/Beta|Satellite|Satellite -105847 NM_005840 10251 Hs.381912 NM_005840 HPRD:03917 SPRY3 HSPRY3|spry-3 sprouty homolog 3 (Drosophila) protein-coding Atac153_MAPQ30_peak_5558 chr6 2714284 2714284 + 1.93899 NA intron (NM_001012418, intron 2 of 12) L1MB3|LINE|L1 36870 NM_001012418 340156 Hs.127830 NM_001012418 HPRD:17355 MYLK4 SgK085 myosin light chain kinase family, member 4 protein-coding Atac153_MAPQ30_peak_1612 chr12 105983936 105983936 + 1.93899 NA Intergenic Intergenic -114045 NR_110108 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility candidate 18 (non-protein coding) ncRNA Atac153_MAPQ30_peak_5124 chr4 90182493 90182493 + 1.93899 NA intron (NM_198281, intron 1 of 1) MER20|DNA|hAT-Charlie 46668 NM_198281 285513 Hs.605082 NM_198281 GPRIN3 GRIN3 GPRIN family member 3 protein-coding Atac153_MAPQ30_peak_4987 chr4 5510220 5510220 + 1.93899 NA Intergenic Intergenic -16663 NM_005750 10141 Hs.177972 NM_005750 HPRD:12826 C4orf6 aC1 chromosome 4 open reading frame 6 protein-coding Atac153_MAPQ30_peak_6794 chr9 124801561 124801561 + 1.93899 NA exon (NM_194252, exon 2 of 4) exon (NM_194252, exon 2 of 4) 54324 NM_001139442 158135 Hs.438937 NM_194252 HPRD:10047 TTLL11 C9orf20|bA244O19.1 tubulin tyrosine ligase-like family, member 11 protein-coding Atac153_MAPQ30_peak_5250 chr5 8190147 8190147 + 1.93140 NA Intergenic Intergenic 267530 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LOC729506 - uncharacterized LOC729506 ncRNA Atac153_MAPQ30_peak_3773 chr2 152036626 152036626 + 1.88814 NA Intergenic Intergenic 81763 NM_198557 375287 Hs.302442 NM_198557 HPRD:10992 RBM43 C2orf38 RNA binding motif protein 43 protein-coding Atac153_MAPQ30_peak_6788 chr9 123561542 123561542 + 1.88814 NA TTS (NR_027442) TTS (NR_027442) 5767 NR_027442 100288842 Hs.706815 NR_027442 LOC100288842 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 pseudogene pseudo Atac153_MAPQ30_peak_5879 chr7 210839 210839 + 1.87621 NA intron (NM_020223, intron 3 of 9) intron (NM_020223, intron 3 of 9) 17870 NM_020223 56975 Hs.134742 NM_020223 FAM20C DMP-4|DMP4|GEF-CK|RNS family with sequence similarity 20, member C protein-coding Atac153_MAPQ30_peak_3145 chr18 73121000 73121000 + 1.87621 NA TTS (NM_001037331) TTS (NM_001037331) 18589 NM_001037331 284274 Hs.666744 NM_001037331 SMIM21 C18orf62 small integral membrane protein 21 protein-coding Atac153_MAPQ30_peak_4366 chr22 26452919 26452919 + 1.87621 NA Intergenic Intergenic -112521 NM_001184773 23544 Hs.194766 NM_021115 HPRD:08449 SEZ6L - seizure related 6 homolog (mouse)-like protein-coding Atac153_MAPQ30_peak_5034 chr4 15141666 15141666 + 1.87621 NA Intergenic Arthur1|DNA|hAT-Tip100 137368 NM_001177381 132864 Hs.656937 NM_182485 HPRD:16744 CPEB2 CPE-BP2|CPEB-2|hCPEB-2 cytoplasmic polyadenylation element binding protein 2 protein-coding Atac153_MAPQ30_peak_741 chr10 47082252 47082252 + 1.87621 NA Intergenic MIRb|SINE|MIR -1282 NM_005972 5540 Hs.524719 NM_005972 HPRD:03476 NPY4R NPY4-R|PP1|PPYR1|Y4 neuropeptide Y receptor Y4 protein-coding Atac153_MAPQ30_peak_6454 chr8 107558578 107558578 + 1.87621 NA intron (NM_018002, intron 3 of 15) intron (NM_018002, intron 3 of 15) 98426 NM_001198532 55074 Hs.127286 NM_018002 HPRD:16126 OXR1 TLDC3 oxidation resistance 1 protein-coding Atac153_MAPQ30_peak_6687 chr9 92732334 92732334 + 1.87621 NA intron (NR_109791, intron 1 of 2) intron (NR_109791, intron 1 of 2) 636 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA Atac153_MAPQ30_peak_3539 chr2 54081424 54081424 + 1.87621 NA exon (NM_006794, exon 2 of 2) exon (NM_006794, exon 2 of 2) -5082 NR_037453 100500850 NR_037453 MIR3682 - microRNA 3682 ncRNA Atac153_MAPQ30_peak_714 chr10 35794315 35794315 + 1.87621 NA intron (NM_001282854, intron 3 of 7) intron (NM_001282854, intron 3 of 7) -100023 NM_153368 219770 Hs.638922 NM_153368 HPRD:13103 GJD4 CX40.1 gap junction protein, delta 4, 40.1kDa protein-coding Atac153_MAPQ30_peak_3883 chr2 223312836 223312836 + 1.87621 NA intron (NM_152386, intron 1 of 4) intron (NM_152386, intron 1 of 4) 23514 NM_152386 130367 Hs.591604 NM_152386 SGPP2 SPP2 sphingosine-1-phosphate phosphatase 2 protein-coding Atac153_MAPQ30_peak_5691 chr6 43594984 43594984 + 1.87621 NA intron (NM_019096, intron 1 of 11) intron (NM_019096, intron 1 of 11) 106 NM_001286216 54676 Hs.485449 NM_019096 HPRD:08465 GTPBP2 - GTP binding protein 2 protein-coding Atac153_MAPQ30_peak_5483 chr5 168086272 168086272 + 1.87621 NA Intergenic Intergenic -79658 NM_024594 79646 Hs.388400 NM_024594 PANK3 - pantothenate kinase 3 protein-coding Atac153_MAPQ30_peak_538 chr1 222396289 222396289 + 1.87621 NA Intergenic MER68|LTR|ERVL 325155 NM_024746 79802 Hs.665660 NM_024746 HPRD:08587 HHIPL2 KIAA1822L HHIP-like 2 protein-coding Atac153_MAPQ30_peak_2592 chr16 81910446 81910446 + 1.87621 NA intron (NM_002661, intron 7 of 32) intron (NM_002661, intron 7 of 32) 97583 NM_002661 5336 Hs.372303 NM_002661 HPRD:02570 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C, gamma 2 (phosphatidylinositol-specific) protein-coding Atac153_MAPQ30_peak_4906 chr3 170201554 170201554 + 1.87621 NA intron (NM_020949, intron 5 of 7) intron (NM_020949, intron 5 of 7) 60663 NR_106886 102465497 NR_106886 MIR6828 hsa-mir-6828 microRNA 6828 ncRNA Atac153_MAPQ30_peak_6713 chr9 98071331 98071331 + 1.87621 NA intron (NM_000136, intron 1 of 14) intron (NM_000136, intron 1 of 14) 8205 NM_001243743 2176 Hs.494529 NM_000136 HPRD:01967 FANCC FA3|FAC|FACC Fanconi anemia, complementation group C protein-coding Atac153_MAPQ30_peak_3497 chr2 33988720 33988720 + 1.87621 NA Intergenic Intergenic -35436 NR_003143 151325 Hs.528847 NM_207329 HPRD:14793 MYADML - myeloid-associated differentiation marker-like (pseudogene) pseudo Atac153_MAPQ30_peak_3564 chr2 69339178 69339178 + 1.87621 NA intron (NM_053034, intron 10 of 14) intron (NM_053034, intron 10 of 14) 8364 NR_036073 100423030 NR_036073 MIR3126 - microRNA 3126 ncRNA Atac153_MAPQ30_peak_2648 chr17 744995 744995 + 1.87621 NA intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 22356 NM_001205319 64359 Hs.527989 NM_022463 HPRD:14858 NXN NRX|TRG-4 nucleoredoxin protein-coding Atac153_MAPQ30_peak_3507 chr2 40658376 40658376 + 1.87621 NA promoter-TSS (NM_021097) promoter-TSS (NM_021097) -932 NM_001252624 6546 Hs.31961 NM_021097 HPRD:01659 SLC8A1 NCX1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein-coding Atac153_MAPQ30_peak_1947 chr14 64678895 64678895 + 1.87621 NA intron (NM_182914, intron 104 of 115) intron (NM_182914, intron 104 of 115) -1964 NM_182913 23224 Hs.745014 NM_015180 HPRD:09763 SYNE2 EDMD5|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing, nuclear envelope 2 protein-coding Atac153_MAPQ30_peak_6087 chr7 99362472 99362472 + 1.87621 NA intron (NM_017460, intron 9 of 12) intron (NM_017460, intron 9 of 12) 19339 NM_017460 1576 Hs.728751 NM_017460 CYP3A4 CP33|CP34|CYP3A|CYP3A3|CYPIIIA3|CYPIIIA4|HLP|NF-25|P450C3|P450PCN1 cytochrome P450, family 3, subfamily A, polypeptide 4 protein-coding Atac153_MAPQ30_peak_597 chr1 234887506 234887506 + 1.84006 NA Intergenic Intergenic 27717 NR_038856 100506810 Hs.586634 NR_038856 ENSG00000227630 LINC01132 - long intergenic non-protein coding RNA 1132 ncRNA Atac153_MAPQ30_peak_4736 chr3 63612202 63612202 + 1.84006 NA Intergenic Intergenic -26142 NM_001080537 132203 Hs.130704 NM_001080537 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding Atac153_MAPQ30_peak_5955 chr7 32519564 32519564 + 1.83279 NA Intergenic Intergenic 10459 NM_012322 23658 Hs.424908 NM_012322 HPRD:06285 LSM5 YER146W LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) protein-coding Atac153_MAPQ30_peak_3880 chr2 221541586 221541586 + 1.83279 NA Intergenic L2|LINE|L2 -770300 NR_036228 100422959 NR_036228 miRBase:MI0015874 MIR4268 - microRNA 4268 ncRNA Atac153_MAPQ30_peak_6836 chr9 135842618 135842618 + 1.83279 NA intron (NM_004188, intron 1 of 10) MSTD|LTR|ERVL-MaLR -11480 NM_001135031 8328 Hs.553160 NM_004188 HPRD:05088 GFI1B BDPLT17 growth factor independent 1B transcription repressor protein-coding Atac153_MAPQ30_peak_6495 chr8 133146150 133146150 + 1.83279 NA intron (NM_001204824, intron 13 of 14) intron (NM_001204824, intron 13 of 14) -28638 NM_001145095 10086 Hs.285026 NM_005712 HPRD:06823 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding Atac153_MAPQ30_peak_534 chr1 217236317 217236317 + 1.83279 NA intron (NM_001243507, intron 1 of 7) intron (NM_001243507, intron 1 of 7) 13995 NM_001243509 2104 Hs.444225 NM_001438 HPRD:04274 ESRRG ERR3|ERRgamma|NR3B3 estrogen-related receptor gamma protein-coding Atac153_MAPQ30_peak_1080 chr11 10671144 10671144 + 1.83279 NA intron (NM_001206881, intron 1 of 18) intron (NM_001206881, intron 1 of 18) 2704 NM_001098579 10335 Hs.501898 NM_130385 HPRD:05242 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding Atac153_MAPQ30_peak_5201 chr4 186275718 186275718 + 1.83279 NA intron (NM_031953, intron 15 of 18) MER20|DNA|hAT-Charlie 24434 NM_018409 55805 Hs.558513 NM_018409 HPRD:10911 LRP2BP - LRP2 binding protein protein-coding Atac153_MAPQ30_peak_5095 chr4 59226527 59226527 + 1.83279 NA Intergenic MER52A|LTR|ERV1 -1249976 NM_001253835 3490 Hs.479808 NM_001553 HPRD:04183 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin-like growth factor binding protein 7 protein-coding Atac153_MAPQ30_peak_991 chr10 130343460 130343460 + 1.83279 NA Intergenic Intergenic 259246 NR_120619 101927381 Hs.523342 NR_120619 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA Atac153_MAPQ30_peak_36 chr1 5731792 5731792 + 1.83279 NA Intergenic MLT1A0|LTR|ERVL-MaLR 107661 NR_039612 100616489 NR_039612 miRBase:MI0016753 MIR4417 - microRNA 4417 ncRNA Atac153_MAPQ30_peak_6696 chr9 94797361 94797361 + 1.83279 NA intron (NM_006415, intron 13 of 14) MER3|DNA|hAT-Charlie 80395 NM_178324 10558 Hs.90458 NM_006415 HPRD:05754 SPTLC1 HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI serine palmitoyltransferase, long chain base subunit 1 protein-coding Atac153_MAPQ30_peak_2522 chr16 57536492 57536492 + 1.83279 NA Intergenic L1M5|LINE|L1 -16107 NM_018110 55715 Hs.279832 NM_018110 HPRD:16316 DOK4 - docking protein 4 protein-coding Atac153_MAPQ30_peak_5628 chr6 30175186 30175186 + 1.83279 NA intron (NM_003449, intron 1 of 9).8 intron (NM_003449, intron 1 of 9).8 6085 NM_003449 7726 Hs.485041 NM_003449 HPRD:02901 TRIM26 AFP|RNF95|ZNF173 tripartite motif containing 26 protein-coding Atac153_MAPQ30_peak_1546 chr12 58229971 58229971 + 1.83279 NA intron (NM_005730, intron 1 of 7) intron (NM_005730, intron 1 of 7) 10776 NM_005730 10106 Hs.524530 NM_005730 HPRD:12281 CTDSP2 OS4|PSR2|SCP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 protein-coding Atac153_MAPQ30_peak_6628 chr9 38140638 38140638 + 1.83279 NA Intergenic Intergenic -71428 NM_003028 6461 Hs.521482 NM_003028 SHB bA3J10.2 Src homology 2 domain containing adaptor protein B protein-coding Atac153_MAPQ30_peak_4749 chr3 69193203 69193203 + 1.83279 NA Intergenic Intergenic -21457 NM_198271 56203 Hs.350621 NM_198271 HPRD:13993 LMOD3 - leiomodin 3 (fetal) protein-coding Atac153_MAPQ30_peak_4374 chr22 27677517 27677517 + 1.83279 NA Intergenic MLT1I|LTR|ERVL-MaLR 378262 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000223704 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA Atac153_MAPQ30_peak_4169 chr20 54849500 54849500 + 1.83279 NA Intergenic MER52-int|LTR|ERV1 25712 NM_019888 4159 Hs.248018 NM_019888 HPRD:01115 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding Atac153_MAPQ30_peak_358 chr1 120457851 120457851 + 1.83279 NA 3' UTR (NM_024408, exon 34 of 34) 3' UTR (NM_024408, exon 34 of 34) -18704 NM_021794 11085 Hs.283011 NM_021794 HPRD:05307 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding Atac153_MAPQ30_peak_3047 chr18 33849910 33849910 + 1.83279 NA Intergenic Intergenic -27749 NM_025135 80206 Hs.630884 NM_025135 HPRD:16894 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding Atac153_MAPQ30_peak_1510 chr12 49447145 49447145 + 1.83279 NA intron (NM_003482, intron 6 of 53) intron (NM_003482, intron 6 of 53) 1962 NM_003482 8085 Hs.731384 NM_003482 HPRD:03664 KMT2D AAD10|ALR|CAGL114|KABUK1|KMS|MLL2|MLL4|TNRC21 lysine (K)-specific methyltransferase 2D protein-coding Atac153_MAPQ30_peak_2185 chr15 61077562 61077562 + 1.83279 NA intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 103794 NR_120318 100996876 Hs.511626 NR_120318 LOC100996876 - uncharacterized LOC100996876 ncRNA Atac153_MAPQ30_peak_2576 chr16 75376379 75376379 + 1.83279 NA intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) -74428 NM_001170715 9564 Hs.479747 NM_014567 HPRD:04248 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas breast cancer anti-estrogen resistance 1 protein-coding Atac153_MAPQ30_peak_4259 chr21 36235338 36235338 + 1.83279 NA intron (NM_001122607, intron 2 of 4) MIRc|SINE|MIR 25649 NM_001122607 861 Hs.149261 NM_001754 HPRD:01043 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBFA2|EVI-1|PEBP2aB runt-related transcription factor 1 protein-coding Atac153_MAPQ30_peak_4903 chr3 165341852 165341852 + 1.83279 NA Intergenic MER52-int|LTR|ERV1 213401 NM_000055 590 Hs.420483 NM_000055 HPRD:01519 BCHE CHE1|CHE2|E1 butyrylcholinesterase protein-coding Atac153_MAPQ30_peak_2120 chr15 29678755 29678755 + 1.83279 NA intron (NM_015307, intron 1 of 10) MLT1E1|LTR|ERVL-MaLR -116735 NM_138704 56160 Hs.94011 NM_138704 HPRD:10503 NDNL2 HCA4|MAGEG1|MAGEL3|NSE3|NSMCE3 necdin-like 2 protein-coding Atac153_MAPQ30_peak_2243 chr15 74640036 74640036 + 1.83279 NA intron (NM_000781, intron 2 of 8) intron (NM_000781, intron 2 of 8) -13857 NR_045207 729739 Hs.742028 NR_045207 ENSG00000260266 LOC729739 - peptidylprolyl isomerase A (cyclophilin A) pseudogene pseudo Atac153_MAPQ30_peak_7214 chrX 131652150 131652150 + 1.83279 NA Intergenic L2a|LINE|L2 -28154 NM_001170704 55796 Hs.105134 NM_018388 HPRD:02329 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind-like splicing regulator 3 protein-coding Atac153_MAPQ30_peak_6152 chr7 134093831 134093831 + 1.83279 NA Intergenic Charlie17a|DNA|hAT-Charlie 50057 NM_001628 231 Hs.521212 NM_001628 HPRD:00071 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1, member B1 (aldose reductase) protein-coding Atac153_MAPQ30_peak_4599 chr3 24429528 24429528 + 1.83279 NA intron (NM_001128176, intron 1 of 10) LTR16A|LTR|ERVL -106050 NR_046244 644990 Hs.631912 NR_046244 THRB-AS1 - THRB antisense RNA 1 ncRNA Atac153_MAPQ30_peak_1703 chr12 125463859 125463859 + 1.83279 NA intron (NM_032656, intron 4 of 26) AluJb|SINE|Alu 9808 NM_032656 57647 Hs.107382 NM_032656 HPRD:10883 DHX37 DDX37 DEAH (Asp-Glu-Ala-His) box polypeptide 37 protein-coding Atac153_MAPQ30_peak_4041 chr20 24369877 24369877 + 1.83279 NA Intergenic MER63B|DNA|hAT-Blackjack -79958 NM_024893 79953 Hs.124638 NM_024893 HPRD:12766 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding Atac153_MAPQ30_peak_6172 chr7 139654189 139654189 + 1.83279 NA intron (NR_029394, intron 6 of 12) intron (NR_029394, intron 6 of 12) 109332 NM_022750 64761 Hs.12646 NM_022750 HPRD:15696 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly (ADP-ribose) polymerase family, member 12 protein-coding Atac153_MAPQ30_peak_6474 chr8 126085413 126085413 + 1.83279 NA exon (NM_014846, exon 9 of 29) exon (NM_014846, exon 9 of 29) 18648 NM_014846 9897 Hs.270043 NM_014846 HPRD:13786 KIAA0196 RTSC|SPG8 KIAA0196 protein-coding Atac153_MAPQ30_peak_5255 chr5 9691031 9691031 + 1.83279 NA intron (NR_027112, intron 9 of 12) Charlie2b|DNA|hAT-Charlie -60568 NM_019599 50834 Hs.567492 NM_019599 HPRD:07267 TAS2R1 T2R1|TRB7 taste receptor, type 2, member 1 protein-coding Atac153_MAPQ30_peak_3099 chr18 47467815 47467815 + 1.83279 NA intron (NM_001080467, intron 14 of 39) intron (NM_001080467, intron 14 of 39) 127422 NR_117096 103091864 Hs.646459 NR_117096 SNHG22 SCARNA17HG small nucleolar RNA host gene 22 (non-protein coding) ncRNA Atac153_MAPQ30_peak_4732 chr3 62044851 62044851 + 1.83279 NA intron (NM_002841, intron 4 of 29) MIRb|SINE|MIR 259771 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA Atac153_MAPQ30_peak_2121 chr15 29713129 29713129 + 1.83279 NA intron (NM_015307, intron 1 of 10) HAL1|LINE|L1 149798 NM_015307 23359 Hs.383564 NM_015307 ENSG00000104059 FAM189A1 TMEM228 family with sequence similarity 189, member A1 protein-coding Atac153_MAPQ30_peak_1453 chr12 6412396 6412396 + 1.83279 NA Intergenic Intergenic -7206 NM_018173 55200 Hs.631660 NM_018173 HPRD:07692 PLEKHG6 MyoGEF pleckstrin homology domain containing, family G (with RhoGef domain) member 6 protein-coding Atac153_MAPQ30_peak_5842 chr6 165170701 165170701 + 1.83279 NA Intergenic Intergenic 552410 NM_144980 168090 Hs.144734 NM_144980 HPRD:12844 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding Atac153_MAPQ30_peak_2745 chr17 19271867 19271867 + 1.83279 NA intron (NM_001243475, intron 1 of 6) intron (NM_001243475, intron 1 of 6) -5821 NM_001243473 27077 Hs.462445 NM_015681 HPRD:16866 B9D1 B9|EPPB9|MKS9|MKSR1 B9 protein domain 1 protein-coding Atac153_MAPQ30_peak_1855 chr13 101599847 101599847 + 1.83279 NA intron (NR_047687, intron 2 of 7) L2a|LINE|L2 -3229 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA Atac153_MAPQ30_peak_1549 chr12 58947492 58947492 + 1.83279 NA Intergenic L1MEb|LINE|L1 228006 NR_120452 101927653 Hs.130744 NR_120452 LOC101927653 - uncharacterized LOC101927653 ncRNA Atac153_MAPQ30_peak_5786 chr6 134775761 134775761 + 1.83279 NA intron (NR_038219, intron 2 of 4) intron (NR_038219, intron 2 of 4) 16233 NR_038218 154092 Hs.223718 NR_038216 LINC01010 - long intergenic non-protein coding RNA 1010 ncRNA Atac153_MAPQ30_peak_6015 chr7 51964709 51964709 + 1.83279 NA Intergenic Intergenic -580194 NM_001287436 23242 Hs.99141 NM_015198 HPRD:10843 COBL - cordon-bleu WH2 repeat protein protein-coding Atac153_MAPQ30_peak_5946 chr7 28653017 28653017 + 1.83279 NA intron (NM_182898, intron 5 of 10) intron (NM_182898, intron 5 of 10) -72704 NM_001011666 9586 Hs.437075 NM_004904 HPRD:09896 CREB5 CRE-BPA cAMP responsive element binding protein 5 protein-coding Atac153_MAPQ30_peak_6134 chr7 130563902 130563902 + 1.83279 NA intron (NR_110473, intron 3 of 3) intron (NR_110473, intron 3 of 3) -1604 NR_029517 407024 NR_029517 miRBase:MI0000105 MIR29B1 MIRN29B1|miRNA29B1 microRNA 29b-1 ncRNA Atac153_MAPQ30_peak_7306 chrY 13479184 13479184 + 1.83279 NA Intergenic LSAU|Satellite|Satellite 1054205 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo Atac153_MAPQ30_peak_6241 chr8 1132108 1132108 + 1.83279 NA Intergenic Intergenic 118715 NR_111948 286083 Hs.382131 NR_033895 ENSG00000253640 LOC286083 - uncharacterized LOC286083 ncRNA Atac153_MAPQ30_peak_4781 chr3 107680136 107680136 + 1.83279 NA Intergenic Intergenic 78084 NR_015394 285205 Hs.134882 NR_015394 ENSG00000240423 LINC00636 - long intergenic non-protein coding RNA 636 ncRNA Atac153_MAPQ30_peak_4559 chr3 10959168 10959168 + 1.83279 NA intron (NM_014229, intron 7 of 13) intron (NM_014229, intron 7 of 13) -75252 NM_003042 6529 Hs.443874 NM_003042 HPRD:00664 SLC6A1 GABATHG|GABATR|GAT1 solute carrier family 6 (neurotransmitter transporter), member 1 protein-coding Atac153_MAPQ30_peak_581 chr1 230880744 230880744 + 1.83279 NA Intergenic Intergenic -2386 NM_006615 10753 Hs.498021 NM_006615 HPRD:05909 CAPN9 GC36|nCL-4 calpain 9 protein-coding Atac153_MAPQ30_peak_6157 chr7 134862499 134862499 + 1.83279 NA Intergenic HERV3-int|LTR|ERV1 -6921 NM_001243751 78996 Hs.732134 NM_024033 HPRD:08333 C7orf49 MRI chromosome 7 open reading frame 49 protein-coding Atac153_MAPQ30_peak_1708 chr12 126621400 126621400 + 1.83279 NA Intergenic L1PA15|LINE|L1 40862 NR_110053 101927464 Hs.443932 NR_110053 ENSG00000256342 LOC101927464 - uncharacterized LOC101927464 ncRNA Atac153_MAPQ30_peak_5999 chr7 50254052 50254052 + 1.83279 NA Intergenic Intergenic -89627 NM_001291839 10320 Hs.435949 NM_006060 HPRD:04318 IKZF1 Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 (Ikaros) protein-coding Atac153_MAPQ30_peak_2090 chr14 105517856 105517856 + 1.83279 NA exon (NM_013345, exon 4 of 4) exon (NM_013345, exon 4 of 4) 14031 NM_001278696 29933 Hs.532504 NM_013345 HPRD:06936 GPR132 G2A G protein-coupled receptor 132 protein-coding Atac153_MAPQ30_peak_2569 chr16 74398441 74398441 + 1.83279 NA intron (NR_026950, intron 1 of 14) AluJr|SINE|Alu 3712 NR_026950 283922 Hs.558726 NR_026950 ENSG00000214331 LOC283922 - pyruvate dehydrogenase phosphatase regulatory subunit pseudogene pseudo Atac153_MAPQ30_peak_1200 chr11 60795208 60795208 + 1.83279 NA Intergenic Intergenic 56095 NM_001254750 923 Hs.744366 NM_006725 HPRD:01724 CD6 TP120 CD6 molecule protein-coding Atac153_MAPQ30_peak_2794 chr17 31943147 31943147 + 1.83279 NA intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -82368 NR_037584 100506677 Hs.652571 NR_037584 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo Atac153_MAPQ30_peak_3716 chr2 128408272 128408272 + 1.83279 NA intron (NM_005291, intron 2 of 2) intron (NM_005291, intron 2 of 2) -2444 NM_001256542 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 PINCH-2|PINCH2 LIM and senescent cell antigen-like domains 2 protein-coding Atac153_MAPQ30_peak_4018 chr20 19504282 19504282 + 1.83279 NA intron (NM_020689, intron 3 of 16) MIRb|SINE|MIR -239042 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA Atac153_MAPQ30_peak_6031 chr7 63347246 63347246 + 1.83279 NA Intergenic Intergenic 143234 NR_039987 100506050 Hs.405628 NR_039987 LINC01005 - long intergenic non-protein coding RNA 1005 ncRNA Atac153_MAPQ30_peak_2290 chr15 84511169 84511169 + 1.83279 NA intron (NM_001301110, intron 7 of 29) LTR1|LTR|ERV1 188331 NM_001301110 57188 Hs.459162 NM_207517 HPRD:12426 ADAMTSL3 ADAMTSL-3 ADAMTS-like 3 protein-coding Atac153_MAPQ30_peak_5972 chr7 38643173 38643173 + 1.81432 NA intron (NM_001635, intron 1 of 20) intron (NM_001635, intron 1 of 20) 27994 NM_001635 273 Hs.592182 NM_001635 HPRD:02687 AMPH AMPH1 amphiphysin protein-coding Atac153_MAPQ30_peak_2163 chr15 54271158 54271158 + 1.71678 NA Intergenic Intergenic -33943 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C (C. elegans) protein-coding Atac153_MAPQ30_peak_4220 chr20 62888865 62888865 + 1.71678 NA intron (NM_018257, intron 1 of 5) intron (NM_018257, intron 1 of 5) 1817 NM_001104925 55251 Hs.744845 NM_018257 HPRD:12764 PCMTD2 C20orf36 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding Atac153_MAPQ30_peak_716 chr10 36700522 36700522 + 1.71678 NA Intergenic HERV16-int|LTR|ERVL 633292 NR_110138 102578074 NR_110138 LINC01452 PCAT5|TPCAT-10-36067 long intergenic non-protein coding RNA 1452 ncRNA Atac153_MAPQ30_peak_165 chr1 30543179 30543179 + 1.63756 NA Intergenic Intergenic -32720 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LOC101929406 - uncharacterized LOC101929406 ncRNA Atac153_MAPQ30_peak_5128 chr4 99815765 99815765 + 1.62575 NA intron (NM_001968, intron 2 of 6) Tigger1|DNA|TcMar-Tigger 34478 NM_001130678 1977 Hs.249718 NM_001968 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F eukaryotic translation initiation factor 4E protein-coding Atac153_MAPQ30_peak_4231 chr21 11144394 11144394 + 1.53964 NA Intergenic Intergenic -45457 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding Atac153_MAPQ30_peak_7113 chrX 81074291 81074291 + 1.46789 NA Intergenic L1MA3|LINE|L1 -616850 NM_030763 79366 Hs.282204 NM_030763 HPRD:02310 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding Atac153_MAPQ30_peak_2027 chr14 91803094 91803094 + 1.43988 NA intron (NM_001080414, intron 10 of 29) intron (NM_001080414, intron 10 of 29) 81094 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding Atac153_MAPQ30_peak_3649 chr2 105500526 105500526 + 1.43988 NA Intergenic Intergenic -11473 NR_110373 102682016 Hs.638438 NR_110373 LINC01159 linc-Brn1b long intergenic non-protein coding RNA 1159 ncRNA Atac153_MAPQ30_peak_3675 chr2 111556870 111556870 + 1.43988 NA intron (NM_001142807, intron 7 of 17) intron (NM_001142807, intron 7 of 17) 66720 NM_001142807 55289 Hs.253320 NM_018308 HPRD:12418 ACOXL - acyl-CoA oxidase-like protein-coding Atac153_MAPQ30_peak_6443 chr8 102244298 102244298 + 1.43988 NA Intergenic L2c|LINE|L2 -26006 NM_001267709 51123 Hs.374485 NM_016096 HPRD:13688 ZNF706 PNAS-106|PNAS-113 zinc finger protein 706 protein-coding Atac153_MAPQ30_peak_5460 chr5 153986770 153986770 + 1.43988 NA Intergenic Intergenic -11138 NR_036094 100422950 NR_036094 miRBase:MI0014165 MIR3141 - microRNA 3141 ncRNA Atac153_MAPQ30_peak_5815 chr6 151671391 151671391 + 1.43988 NA exon (NM_144497, exon 2 of 3) exon (NM_144497, exon 2 of 3) 24725 NM_144497 9590 Hs.371240 NM_005100 HPRD:05263 AKAP12 AKAP250|SSeCKS A kinase (PRKA) anchor protein 12 protein-coding Atac153_MAPQ30_peak_282 chr1 61939266 61939266 + 1.43988 NA Intergenic HSMAR2|DNA|TcMar-Mariner -180648 NR_073400 414927 Hs.123471 NR_073400 MGC34796 - sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) pseudogene pseudo Atac153_MAPQ30_peak_3467 chr2 27422155 27422155 + 1.43988 NA TTS (NM_021095) TTS (NM_021095) -12744 NM_080592 51374 Hs.9527 NM_016085 HPRD:16652 ATRAID APR--3|APR-3|APR3|C2orf28|PRO240|p18 all-trans retinoic acid-induced differentiation factor protein-coding Atac153_MAPQ30_peak_2951 chr17 77087912 77087912 + 1.43988 NA intron (NM_001082575, intron 14 of 14) intron (NM_001082575, intron 14 of 14) 16893 NM_001042573 64772 Hs.29288 NM_022759 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding Atac153_MAPQ30_peak_359 chr1 121484831 121484831 + 1.43988 NA Intergenic ALR/Alpha|Satellite|centr 223921 NR_003955 647121 Hs.697682 NR_003955 EMBP1 - embigin pseudogene 1 pseudo Atac153_MAPQ30_peak_7189 chrX 121078090 121078090 + 1.43988 NA Intergenic L1MB1|LINE|L1 896628 NM_012084 2747 Hs.368538 NM_012084 HPRD:02143 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding Atac153_MAPQ30_peak_6385 chr8 56102148 56102148 + 1.43988 NA intron (NM_052898, intron 1 of 2) Tigger3a|DNA|TcMar-Tigger 87131 NM_052898 114786 Hs.130197 NM_052898 XKR4 XRG4 XK, Kell blood group complex subunit-related family, member 4 protein-coding Atac153_MAPQ30_peak_2779 chr17 26132866 26132866 + 1.43988 NA Intergenic Intergenic -5311 NM_000625 4843 Hs.709191 NM_000625 HPRD:01225 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2, inducible protein-coding Atac153_MAPQ30_peak_4131 chr20 45333528 45333528 + 1.43988 NA Intergenic LTR26E|LTR|ERV1 -4751 NM_030777 81031 Hs.305971 NM_030777 HPRD:05851 SLC2A10 ATS|GLUT10 solute carrier family 2 (facilitated glucose transporter), member 10 protein-coding Atac153_MAPQ30_peak_6524 chr8 139856142 139856142 + 1.43988 NA intron (NM_152888, intron 4 of 64) intron (NM_152888, intron 4 of 64) 70094 NM_152888 169044 Hs.117169 NM_152888 HPRD:09885 COL22A1 - collagen, type XXII, alpha 1 protein-coding Atac153_MAPQ30_peak_5920 chr7 19900964 19900964 + 1.43988 NA Intergenic ERVL-B4-int|LTR|ERVL -88560 NM_152774 256130 Hs.487670 NM_152774 HPRD:14617 TMEM196 - transmembrane protein 196 protein-coding Atac153_MAPQ30_peak_997 chr10 130866929 130866929 + 1.43988 NA Intergenic MLT1E1A|LTR|ERVL-MaLR -398525 NM_002412 4255 Hs.501522 NM_002412 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding Atac153_MAPQ30_peak_5281 chr5 17147742 17147742 + 1.43988 NA intron (NR_027253, intron 2 of 2) intron (NR_027253, intron 2 of 2) -69190 NM_001271606 10409 Hs.201641 NM_006317 HPRD:08389 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant, membrane attached signal protein 1 protein-coding Atac153_MAPQ30_peak_3406 chr2 10175702 10175702 + 1.43988 NA Intergenic AluSx|SINE|Alu -7980 NM_003597 8462 Hs.12229 NM_003597 HPRD:04488 KLF11 FKLF|FKLF1|MODY7|TIEG2|Tieg3 Kruppel-like factor 11 protein-coding Atac153_MAPQ30_peak_6542 chr8 142568514 142568514 + 1.43988 NA Intergenic MIRb|SINE|MIR -51184 NR_102364 389690 Hs.689547 NM_207414 HPRD:13480 MROH5 - maestro heat-like repeat family member 5 protein-coding Atac153_MAPQ30_peak_77 chr1 14080955 14080955 + 1.43988 NA intron (NM_001135610, intron 6 of 7) MIRc|SINE|MIR 5079 NM_001007257 7799 Hs.371823 NM_012231 HPRD:03120 PRDM2 HUMHOXY1|KMT8|MTB-ZF|RIZ|RIZ1|RIZ2 PR domain containing 2, with ZNF domain protein-coding Atac153_MAPQ30_peak_3120 chr18 56745569 56745569 + 1.43988 NA Intergenic Intergenic 42598 NR_024021 390858 Hs.722775 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo Atac153_MAPQ30_peak_5107 chr4 78239849 78239849 + 1.43988 NA Intergenic Intergenic 161492 NM_004354 901 Hs.740456 NM_004354 HPRD:04438 CCNG2 - cyclin G2 protein-coding Atac153_MAPQ30_peak_1821 chr13 52525217 52525217 + 1.43988 NA intron (NM_001243182, intron 10 of 21) L2a|LINE|L2 60413 NM_001243182 540 Hs.492280 NM_000053 HPRD:06050 ATP7B PWD|WC1|WD|WND ATPase, Cu++ transporting, beta polypeptide protein-coding Atac153_MAPQ30_peak_6523 chr8 139760592 139760592 + 1.43988 NA intron (NM_152888, intron 22 of 64) intron (NM_152888, intron 22 of 64) 165644 NM_152888 169044 Hs.117169 NM_152888 HPRD:09885 COL22A1 - collagen, type XXII, alpha 1 protein-coding Atac153_MAPQ30_peak_86 chr1 15526008 15526008 + 1.43988 NA intron (NM_018022, intron 1 of 2) intron (NM_018022, intron 1 of 2) -27888 NM_001278502 727684 Hs.667584 NM_001278501 C1orf195 - chromosome 1 open reading frame 195 protein-coding Atac153_MAPQ30_peak_2229 chr15 70816339 70816339 + 1.43988 NA Intergenic Intergenic 178281 NM_001008224 55075 Hs.108049 NM_018003 HPRD:11657 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding Atac153_MAPQ30_peak_5197 chr4 185136970 185136970 + 1.43988 NA intron (NM_153343, intron 1 of 7) intron (NM_153343, intron 1 of 7) 2144 NM_153343 133121 Hs.297814 NM_153343 HPRD:16863 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding Atac153_MAPQ30_peak_3219 chr19 10919949 10919949 + 1.43988 NA intron (NM_001005361, intron 14 of 20) intron (NM_001005361, intron 14 of 20) 8223 NR_029586 406976 NR_029586 miRBase:MI0000242 MIR199A1 MIR-199-s|MIRN199A1 microRNA 199a-1 ncRNA Atac153_MAPQ30_peak_4257 chr21 35820886 35820886 + 1.43988 NA 3' UTR (NM_000219, exon 4 of 4) 3' UTR (NM_000219, exon 4 of 4) 7221 NM_001127670 3753 Hs.121495 NM_000219 HPRD:01442 KCNE1 ISK|JLNS|JLNS2|LQT2/5|LQT5|MinK potassium voltage-gated channel, Isk-related family, member 1 protein-coding Atac153_MAPQ30_peak_3565 chr2 69340143 69340143 + 1.43988 NA intron (NM_053034, intron 10 of 14) intron (NM_053034, intron 10 of 14) 9329 NR_036073 100423030 NR_036073 MIR3126 - microRNA 3126 ncRNA Atac153_MAPQ30_peak_2179 chr15 59730754 59730754 + 1.43988 NA intron (NM_152450, intron 1 of 8) intron (NM_152450, intron 1 of 8) 382 NM_152450 145773 Hs.531168 NM_152450 HPRD:14508 FAM81A - family with sequence similarity 81, member A protein-coding Atac153_MAPQ30_peak_3293 chr19 38562574 38562574 + 1.43988 NA intron (NM_015073, intron 2 of 21) L2|LINE|L2 152316 NM_001289978 8193 Hs.631576 NM_004647 HPRD:03393 DPF1 BAF45b|NEUD4|neuro-d4 D4, zinc and double PHD fingers family 1 protein-coding Atac153_MAPQ30_peak_6276 chr8 10224237 10224237 + 1.43988 NA intron (NM_001199729, intron 6 of 6) L2c|LINE|L2 -107838 NR_120604 101929191 Hs.595262 NR_120604 LINCR-0001 - uncharacterized LINCR-0001 ncRNA Atac153_MAPQ30_peak_2466 chr16 27941230 27941230 + 1.43988 NA intron (NM_001109763, intron 2 of 6) intron (NM_001109763, intron 2 of 6) -41752 NM_144675 146395 Hs.91910 NM_144675 HPRD:14464 GSG1L PRO19651 GSG1-like protein-coding Atac153_MAPQ30_peak_6285 chr8 11614335 11614335 + 1.43988 NA intron (NM_002052, intron 5 of 6) intron (NM_002052, intron 5 of 6) -4430 NR_103552 606553 Hs.545529 NM_001031839 C8orf49 G4DM chromosome 8 open reading frame 49 ncRNA Atac153_MAPQ30_peak_5106 chr4 78237108 78237108 + 1.43988 NA Intergenic Intergenic 158751 NM_004354 901 Hs.740456 NM_004354 HPRD:04438 CCNG2 - cyclin G2 protein-coding Atac153_MAPQ30_peak_404 chr1 159782875 159782875 + 1.42509 NA intron (NM_001004310, intron 6 of 9) intron (NM_001004310, intron 6 of 9) 10702 NM_001004310 343413 Hs.196955 NM_001004310 HPRD:14177 FCRL6 FcRH6 Fc receptor-like 6 protein-coding Atac153_MAPQ30_peak_1313 chr11 112250746 112250746 + 1.42509 NA Intergenic Intergenic -102209 NR_120559 101928823 Hs.126118 NR_120559 ENSG00000254968 LOC101928823 - uncharacterized LOC101928823 ncRNA Atac153_MAPQ30_peak_5994 chr7 47694571 47694571 + 1.42509 NA promoter-TSS (NM_001123065) promoter-TSS (NM_001123065) -271 NM_001123065 401335 Hs.520816 NM_001123065 ENSG00000221845 C7orf65 - chromosome 7 open reading frame 65 protein-coding Atac153_MAPQ30_peak_3655 chr2 106289004 106289004 + 1.42509 NA Intergenic Intergenic -61988 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA Atac153_MAPQ30_peak_2627 chr16 87492370 87492370 + 1.42509 NA intron (NM_015144, intron 2 of 12) intron (NM_015144, intron 2 of 12) 33090 NM_015144 23174 Hs.156231 NM_015144 HPRD:18316 ZCCHC14 BDG-29|BDG29 zinc finger, CCHC domain containing 14 protein-coding Atac153_MAPQ30_peak_6370 chr8 47827201 47827201 + 1.42509 NA Intergenic Intergenic 74693 NR_027013 497634 Hs.406982 NR_027012 ENSG00000253314 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA Atac153_MAPQ30_peak_525 chr1 214028702 214028702 + 1.42509 NA Intergenic Intergenic -69390 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA Atac153_MAPQ30_peak_5760 chr6 111904294 111904294 + 1.42509 NA intron (NR_028338, intron 3 of 9) L2a|LINE|L2 -15731 NM_001164283 10758 Hs.561514 NM_147200 HPRD:06129 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding Atac153_MAPQ30_peak_5781 chr6 132592158 132592158 + 1.42509 NA Intergenic Intergenic 130515 NM_015529 26002 Hs.6909 NM_015529 HPRD:10093 MOXD1 MOX|PRO5780|dJ248E1.1 monooxygenase, DBH-like 1 protein-coding Atac153_MAPQ30_peak_3590 chr2 79296008 79296008 + 1.42509 NA Intergenic MLT1D|LTR|ERVL-MaLR 19142 NM_006507 5968 Hs.4158 NM_006507 HPRD:01339 REG1B PSPS2|REGH|REGI-BETA|REGL regenerating islet-derived 1 beta protein-coding Atac153_MAPQ30_peak_3049 chr18 34009807 34009807 + 1.42509 NA intron (NM_001281739, intron 3 of 23) intron (NM_001281739, intron 3 of 23) 132148 NM_001281739 80206 Hs.630884 NM_025135 HPRD:16894 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding Atac153_MAPQ30_peak_1050 chr11 5544525 5544525 + 1.42509 NA Intergenic Intergenic -6569 NM_145053 143630 Hs.10688 NM_145053 HPRD:14472 UBQLNL - ubiquilin-like protein-coding Atac153_MAPQ30_peak_4866 chr3 138117336 138117336 + 1.42509 NA exon (NM_001252090, exon 4 of 6) exon (NM_001252090, exon 4 of 6) -36079 NM_031913 83850 Hs.477711 NM_031913 HPRD:13054 ESYT3 CHR3SYT|E-Syt3|FAM62C extended synaptotagmin-like protein 3 protein-coding Atac153_MAPQ30_peak_4369 chr22 26773421 26773421 + 1.42509 NA intron (NM_021115, intron 15 of 16) intron (NM_021115, intron 15 of 16) -51859 NM_020437 57168 Hs.567547 NM_020437 HPRD:14255 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding Atac153_MAPQ30_peak_4522 chr22 49775936 49775936 + 1.42509 NA Intergenic Intergenic 275254 NR_110522 348645 Hs.133159 NM_198851 HPRD:14180 C22orf34 - chromosome 22 open reading frame 34 protein-coding Atac153_MAPQ30_peak_3319 chr19 45580665 45580665 + 1.42509 NA promoter-TSS (NM_145288) promoter-TSS (NM_145288) -977 NM_145288 162979 Hs.192237 NM_145288 HPRD:15782 ZNF296 ZFP296|ZNF342 zinc finger protein 296 protein-coding Atac153_MAPQ30_peak_3640 chr2 101372725 101372725 + 1.42509 NA Intergenic MLT1L|LTR|ERVL-MaLR -63888 NM_002518 4862 Hs.156832 NM_002518 HPRD:09137 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding Atac153_MAPQ30_peak_1638 chr12 110808212 110808212 + 1.42509 NA Intergenic L1MB3|LINE|L1 33323 NM_001137664 51434 Hs.719935 NM_016238 HPRD:16233 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding Atac153_MAPQ30_peak_838 chr10 86024896 86024896 + 1.42509 NA Intergenic Intergenic -14840 NR_038220 170425 Hs.434131 NR_038220 ENSG00000229404 LINC00858 - long intergenic non-protein coding RNA 858 ncRNA Atac153_MAPQ30_peak_4745 chr3 67357792 67357792 + 1.42509 NA Intergenic Intergenic 81904 NR_036234 100422941 NR_036234 MIR4272 - microRNA 4272 ncRNA Atac153_MAPQ30_peak_4857 chr3 134913345 134913345 + 1.42509 NA intron (NM_004441, intron 11 of 15) intron (NM_004441, intron 11 of 15) 399246 NM_004441 2047 Hs.116092 NM_004441 HPRD:02790 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding Atac153_MAPQ30_peak_3156 chr18 74451714 74451714 + 1.42509 NA Intergenic Intergenic 49728 NR_122073 400661 Hs.514963 NR_122073 LOC400661 - uncharacterized LOC400661 ncRNA Atac153_MAPQ30_peak_1446 chr12 5166393 5166393 + 1.42509 NA Intergenic L2c|LINE|L2 13308 NM_002234 3741 Hs.150208 NM_002234 HPRD:08888 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel, shaker-related subfamily, member 5 protein-coding