samplename filename condition paired stranded GK3R87-GIH1 /data/images/proton/run340/www/GK3R87-GIH1.bam GIH single yes GK3R88-GIH2 /data/images/proton/run340/www/GK3R88-GIH2.bam GIH single yes GK3R89-GIH3 /data/images/proton/run340/www/GK3R89-GIH3.bam GIH single yes GK3R90-GIL1 /data/images/proton/run340/www/GK3R90-GIL1.bam GIL single yes GK3R91-GIL2 /data/images/proton/run340/www/GK3R91-GIL2.bam GIL single yes GK3R92-GIL3 /data/images/proton/run340/www/GK3R92-GIL3.bam GIL single yes GK3R93-TI1 /data/images/proton/run340/www/GK3R93-TI1.bam TI single yes GK3R94-TI2 /data/images/proton/run340/www/GK3R94-TI2.bam TI single yes GK3R95-TI3 /data/images/proton/run340/www/GK3R95-TI3.bam TI single yes GK3R96-UI1 /data/images/proton/run340/www/GK3R96-UI1.bam UI single yes GK3R97-UI2 /data/images/proton/run340/www/GK3R97-UI2.bam UI single yes GK3R98-UI3 /data/images/proton/run340/www/GK3R98-UI3.bam UI single yes