samplename filename condition paired stranded GK3R87-GIH1 /data/images/proton/run340/www/GK3R87-GIH1.bam GIH single yes GK3R89-GIH3 /data/images/proton/run340/www/GK3R89-GIH3.bam GIH single yes GK3R90-GIL1 /data/images/proton/run340/www/GK3R90-GIL1.bam GIL single yes GK3R91-GIL2 /data/images/proton/run340/www/GK3R91-GIL2.bam GIL single yes GK3R92-GIL3 /data/images/proton/run340/www/GK3R92-GIL3.bam GIL single yes GK3R93-TI1 /data/images/proton/run340/www/GK3R93-TI1.bam TI single yes GK3R94-TI2 /data/images/proton/run340/www/GK3R94-TI2.bam TI single yes GK3R95-TI3 /data/images/proton/run340/www/GK3R95-TI3.bam TI single yes T1 /data/images/proton2/run296/www/GK3R1-T1.bam T single yes T2 /data/images/proton2/run296/www/GK3R2-T2.bam T single yes T3 /data/images/proton2/run296/www/GK3R3-T3.bam T single yes G1 /data/images/proton2/run296/www/GK3R7-G1.bam G single yes G2 /data/images/proton2/run296/www/GK3R8-G2.bam G single yes G3 /data/images/proton2/run296/www/GK3R9-G3.bam G single yes