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Summary
Analysis summary
Summary:
The raw bam files, one for each RNA-Seq sample, were summarized to read counts table, using the Bioconductor package GenomicRanges. In the final read counts table, each row represented each column one RNA-Seq sample and each cell, the corresponding read counts associated with each row and column.The gene counts table was normalized for inherent systematic or experimental biases (e.g. sequencing depth, gene length, GC content bias etc.) using the Bioconductor package DESeq after removing genes that had zero counts over all the RNA-Seq samples (22684 genes). The output of the normalization algorithm was a table with normalized counts, which can be used for differential expression analysis with statistical algorithms developed specifically for count data. Prior to the statistical testing procedure, the gene read counts were filtered for possible artifacts that could affect the subsequent statistical testing procedures. Genes presenting any of the following were excluded from further analysis: i) genes with length less than 500 (4562 genes), ii) genes whose average reads per 100 bp was less than the 25th quantile of the total normalized distribution of average reads per 100bp (0 genes with cutoff value 0.02336 average reads per 100 bp), iii) genes with read counts below the median read counts of the total normalized count distribution (8501 genes with cutoff value 3 normalized read counts). The total number of genes excluded due to the application of gene filters was 5573. The total (unified) number of genes excluded due to the application of all filters was 33432. The resulting gene counts table was subjected to differential expression analysis for the contrasts UI versus TI, UI versus GIH, UI versus GIL, TI versus GIH, TI versus GIL, GIH versus GIL using the Bioconductor package DESeq. The final numbers of differentially expressed genes were (per contrast): for the contrast UI versus TI, 1480 (317) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 601 (114) were up-regulated, 865 (203) were down-regulated and 14 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast UI versus GIH, 1498 (477) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 620 (195) were up-regulated, 862 (282) were down-regulated and 16 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast UI versus GIL, 1989 (766) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 733 (250) were up-regulated, 1250 (516) were down-regulated and 6 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast TI versus GIH, 455 (18) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 245 (10) were up-regulated, 210 (8) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast TI versus GIL, 517 (28) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 221 (1) were up-regulated, 296 (27) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast GIH versus GIL, 186 (1) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 43 (0) were up-regulated, 143 (1) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale. Literature references for all the algorithms used can be found at the end of this report.
Read counts file: imported sam/bam/bed files
Conditions: GIL, TI, UI, GIH
Samples included: GK3R90-GIL1, GK3R91-GIL2, GK3R92-GIL3, GK3R93-TI1, GK3R94-TI2, GK3R95-TI3, GK3R96-UI1, GK3R97-UI2, GK3R98-UI3, GK3R87-GIH1, GK3R89-GIH3
Samples excluded:
none
Requested contrasts: UI_vs_TI, UI_vs_GIH, UI_vs_GIL, TI_vs_GIH, TI_vs_GIL, GIH_vs_GIL
Library sizes:
- GK3R90-GIL1: 1970874
- GK3R91-GIL2: 4485905
- GK3R92-GIL3: 3653775
- GK3R93-TI1: 1385705
- GK3R94-TI2: 1774072
- GK3R95-TI3: 3802036
- GK3R96-UI1: 362239
- GK3R97-UI2: 4433440
- GK3R98-UI3: 3365337
- GK3R87-GIH1: 2879936
- GK3R89-GIH3: 3099063
Annotation: download
Organism: mouse ( Mus musculus), genome version alias mm10
Annotation source: Ensembl genomes
Count type: utr
Exon filters:
none applied
Gene filters:
length, avg.reads, expression, biotype - avg.reads
- average.per.bp: 100
- quantile: 0.25
- expression
- median: TRUE
- mean: FALSE
- quantile: NA
- known: NA
- custom: NA
- biotype
- pseudogene: FALSE
- snRNA: FALSE
- protein_coding: FALSE
- antisense: FALSE
- miRNA: FALSE
- snoRNA: FALSE
- lincRNA: FALSE
- processed_transcript: FALSE
- misc_RNA: FALSE
- rRNA: TRUE
- sense_intronic: FALSE
- sense_overlapping: FALSE
- polymorphic_pseudogene: FALSE
- IG_C_gene: FALSE
- IG_J_gene: FALSE
- IG_D_gene: FALSE
- IG_LV_gene: FALSE
- IG_V_gene: FALSE
- IG_V_pseudogene: TRUE
- TR_V_gene: FALSE
- TR_V_pseudogene: TRUE
- three_prime_overlapping_ncrna: FALSE
Filter application: after normalization
Normalization algorithm: DESeq
Normalization arguments:
locfunc - [[list(locfunc = function (x, na.rm = FALSE)
standardGeneric("median"))locfunc
Statistical algorithm(s): DESeq
Statistical arguments for DESeq: method, sharingMode, fitType - method: blind
- sharingMode: fit-only
- fitType: local
Meta-analysis method: no meta-analysis, reported p-values from the first supplied statistical algorithm
Multiple testing correction: Benjamini-Hochberg FDR
p-value threshold: 0.05
Logarithmic tranformation offset: 1
Analysis preset: not available
Quality control plots: multidimensional scaling, biotype detection, biotype counts, sample and biotype saturation, filtered biotypes, correlation heatmap and correlogram, pairwise scatterplots between samples, boxplots, GC-content bias, transcript length bias, DEG biotype detection, volcano plot, DEG heatmap
Figure format: png, pdf
Output directory: /data/images/proton/run340/www/metaseqr_quantseq_run340_without_GIH2_stranded
Output data: Annotation, p-value, Adjusted p-value (FDR), Fold change, Read counts
Output scale(s): log2 scale, Reads per Gene Model
Output values: Normalized values
Output statistics: Mean, Median, Standard deviation, Median Absolute Deviation (MAD), Coefficient of Variation, Robust Coefficient of Variation
Total run time: 25 minutes 08 seconds
Filtered genes
Number of filtered genes: 33432 which is the union of
- Filtered because of zero reads: 22684
-
Filtered because of exon filters: 0
-
Filtered because of gene filters: 10748
which is the union of
- length: 4562 genes with filter cutoff value 500
- avg.reads: 873 genes with filter cutoff value 0.02336449
- expression: 8501 genes further decomposed to (filter name, filtered genes, filter cutoff):
- median: 8501 genes with filter cutoff value 3
- biotype: 137 genes with filter cutoff value rRNA, IG_V_pseudogene, TR_V_pseudogene
Differentially expressed genes
Number of differentially expressed genes per contrast:
- UI_vs_TI: 1480 (317) statistically significant genes of which 601 (114) up regulated, 865 (203) down regulated and 14 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- UI_vs_GIH: 1498 (477) statistically significant genes of which 620 (195) up regulated, 862 (282) down regulated and 16 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- UI_vs_GIL: 1989 (766) statistically significant genes of which 733 (250) up regulated, 1250 (516) down regulated and 6 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- TI_vs_GIH: 455 (18) statistically significant genes of which 245 (10) up regulated, 210 (8) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- TI_vs_GIL: 517 (28) statistically significant genes of which 221 (1) up regulated, 296 (27) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- GIH_vs_GIL: 186 (1) statistically significant genes of which 43 (0) up regulated, 143 (1) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
Run log[ 2017-06-14 14:02:54 ] INFO 2017-06-14 14:02:54: Data processing started... [ 2017-06-14 14:02:54 ] INFO Read counts file: imported sam/bam/bed files [ 2017-06-14 14:02:54 ] INFO Conditions: GIL, TI, UI, GIH [ 2017-06-14 14:02:54 ] INFO Samples to include: GK3R90-GIL1, GK3R91-GIL2, GK3R92-GIL3, GK3R93-TI1, GK3R94-TI2, GK3R95-TI3, GK3R96-UI1, GK3R97-UI2, GK3R98-UI3, GK3R87-GIH1, GK3R89-GIH3 [ 2017-06-14 14:02:54 ] INFO Samples to exclude: none [ 2017-06-14 14:02:54 ] INFO Requested contrasts: UI_vs_TI, UI_vs_GIH, UI_vs_GIL, TI_vs_GIH, TI_vs_GIL, GIH_vs_GIL [ 2017-06-14 14:02:54 ] INFO Annotation: download [ 2017-06-14 14:02:54 ] INFO Organism: mm10 [ 2017-06-14 14:02:54 ] INFO Reference source: ensembl [ 2017-06-14 14:02:54 ] INFO Count type: utr [ 2017-06-14 14:02:54 ] INFO Exon filters: none applied [ 2017-06-14 14:02:54 ] INFO Gene filters: length, avg.reads, expression, biotype [ 2017-06-14 14:02:54 ] INFO length: [ 2017-06-14 14:02:54 ] INFO length: 500 [ 2017-06-14 14:02:54 ] INFO avg.reads: [ 2017-06-14 14:02:54 ] INFO average.per.bp: 100 [ 2017-06-14 14:02:54 ] INFO quantile: 0.25 [ 2017-06-14 14:02:54 ] INFO expression: [ 2017-06-14 14:02:54 ] INFO median: TRUE [ 2017-06-14 14:02:54 ] INFO mean: FALSE [ 2017-06-14 14:02:54 ] INFO quantile: NA [ 2017-06-14 14:02:54 ] INFO known: NA [ 2017-06-14 14:02:54 ] INFO custom: NA [ 2017-06-14 14:02:54 ] INFO biotype: [ 2017-06-14 14:02:54 ] INFO pseudogene: FALSE [ 2017-06-14 14:02:54 ] INFO snRNA: FALSE [ 2017-06-14 14:02:54 ] INFO protein_coding: FALSE [ 2017-06-14 14:02:54 ] INFO antisense: FALSE [ 2017-06-14 14:02:54 ] INFO miRNA: FALSE [ 2017-06-14 14:02:54 ] INFO snoRNA: FALSE [ 2017-06-14 14:02:54 ] INFO lincRNA: FALSE [ 2017-06-14 14:02:54 ] INFO processed_transcript: FALSE [ 2017-06-14 14:02:54 ] INFO misc_RNA: FALSE [ 2017-06-14 14:02:54 ] INFO rRNA: TRUE [ 2017-06-14 14:02:54 ] INFO sense_intronic: FALSE [ 2017-06-14 14:02:54 ] INFO sense_overlapping: FALSE [ 2017-06-14 14:02:54 ] INFO polymorphic_pseudogene: FALSE [ 2017-06-14 14:02:54 ] INFO IG_C_gene: FALSE [ 2017-06-14 14:02:54 ] INFO IG_J_gene: FALSE [ 2017-06-14 14:02:54 ] INFO IG_D_gene: FALSE [ 2017-06-14 14:02:54 ] INFO IG_LV_gene: FALSE [ 2017-06-14 14:02:54 ] INFO IG_V_gene: FALSE [ 2017-06-14 14:02:54 ] INFO IG_V_pseudogene: TRUE [ 2017-06-14 14:02:54 ] INFO TR_V_gene: FALSE [ 2017-06-14 14:02:54 ] INFO TR_V_pseudogene: TRUE [ 2017-06-14 14:02:54 ] INFO three_prime_overlapping_ncrna: FALSE [ 2017-06-14 14:02:54 ] INFO Filter application: postnorm [ 2017-06-14 14:02:54 ] INFO Normalization algorithm: deseq [ 2017-06-14 14:02:54 ] INFO Normalization arguments: [ 2017-06-14 14:02:54 ] INFO locfunc: [ 2017-06-14 14:02:54 ] INFO [[ [ 2017-06-14 14:02:54 ] INFO list(locfunc = function (x, na.rm = FALSE) standardGeneric("median")) [ 2017-06-14 14:02:54 ] INFO locfunc [ 2017-06-14 14:02:54 ] INFO Statistical algorithm: deseq [ 2017-06-14 14:02:54 ] INFO Statistical arguments: [ 2017-06-14 14:02:54 ] INFO deseq: blind, fit-only, local [ 2017-06-14 14:02:54 ] INFO Meta-analysis method: none [ 2017-06-14 14:02:54 ] INFO Multiple testing correction: BH [ 2017-06-14 14:02:54 ] INFO p-value threshold: 0.05 [ 2017-06-14 14:02:54 ] INFO Logarithmic transformation offset: 1 [ 2017-06-14 14:02:54 ] INFO Quality control plots: mds, biodetection, countsbio, saturation, readnoise, filtered, correl, pairwise, boxplot, gcbias, lengthbias, biodist, volcano, deheatmap [ 2017-06-14 14:02:54 ] INFO Figure format: png, pdf [ 2017-06-14 14:02:54 ] INFO Output directory: /data/images/proton/run340/www/metaseqr_quantseq_run340_without_GIH2_stranded [ 2017-06-14 14:02:54 ] INFO Output data: annotation, p.value, adj.p.value, fold.change, counts, flags [ 2017-06-14 14:02:54 ] INFO Output scale(s): log2, rpgm [ 2017-06-14 14:02:54 ] INFO Output values: normalized [ 2017-06-14 14:02:54 ] INFO Downloading gene annotation for mm10... [ 2017-06-14 14:03:02 ] INFO Downloading transcript annotation for mm10... [ 2017-06-14 14:04:35 ] INFO Converting annotation to GenomicRanges object... [ 2017-06-14 14:04:35 ] INFO Merging transcript 3' UTRs to create unique gene/transcript models... [ 2017-06-14 14:08:39 ] INFO Flanking merged transcript 3' UTRs per 500bp... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R90-GIL1.bam for sample with name GK3R90-GIL1. This might take some time... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R91-GIL2.bam for sample with name GK3R91-GIL2. This might take some time... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R92-GIL3.bam for sample with name GK3R92-GIL3. This might take some time... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R93-TI1.bam for sample with name GK3R93-TI1. This might take some time... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R94-TI2.bam for sample with name GK3R94-TI2. This might take some time... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R95-TI3.bam for sample with name GK3R95-TI3. This might take some time... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R96-UI1.bam for sample with name GK3R96-UI1. This might take some time... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R97-UI2.bam for sample with name GK3R97-UI2. This might take some time... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R98-UI3.bam for sample with name GK3R98-UI3. This might take some time... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R87-GIH1.bam for sample with name GK3R87-GIH1. This might take some time... [ 2017-06-14 14:08:42 ] INFO Reading bam file GK3R89-GIH3.bam for sample with name GK3R89-GIH3. This might take some time... [ 2017-06-14 14:08:43 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:43 ] INFO ...for single-end reads... [ 2017-06-14 14:08:43 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:08:44 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:44 ] INFO ...for single-end reads... [ 2017-06-14 14:08:44 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:08:45 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:45 ] INFO ...for single-end reads... [ 2017-06-14 14:08:45 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:08:45 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:45 ] INFO ...for single-end reads... [ 2017-06-14 14:08:45 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:08:48 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:48 ] INFO ...for single-end reads... [ 2017-06-14 14:08:48 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:08:48 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:48 ] INFO ...for single-end reads... [ 2017-06-14 14:08:48 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:08:48 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:48 ] INFO ...for single-end reads... [ 2017-06-14 14:08:48 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:08:48 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:48 ] INFO ...for single-end reads... [ 2017-06-14 14:08:48 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:08:49 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:49 ] INFO ...for single-end reads... [ 2017-06-14 14:08:49 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:08:50 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:50 ] INFO ...for single-end reads... [ 2017-06-14 14:08:50 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:08:50 ] INFO Counting reads overlapping with given annotation... [ 2017-06-14 14:08:50 ] INFO ...for single-end reads... [ 2017-06-14 14:08:50 ] INFO ...assuming forward sequenced reads... [ 2017-06-14 14:09:32 ] INFO Exporting raw read counts table to /data/images/proton/run340/www/metaseqr_quantseq_run340_without_GIH2_stranded/lists/raw_counts_table.txt.gz [ 2017-06-14 14:09:35 ] INFO Checking chromosomes in transcript counts and gene annotation... [ 2017-06-14 14:09:35 ] INFO Processing transcripts... [ 2017-06-14 14:09:35 ] INFO Separating transcripts (UTR regions) per gene for GK3R90-GIL1... [ 2017-06-14 14:09:51 ] INFO Separating transcripts (UTR regions) per gene for GK3R91-GIL2... [ 2017-06-14 14:10:09 ] INFO Separating transcripts (UTR regions) per gene for GK3R92-GIL3... [ 2017-06-14 14:10:29 ] INFO Separating transcripts (UTR regions) per gene for GK3R93-TI1... [ 2017-06-14 14:10:52 ] INFO Separating transcripts (UTR regions) per gene for GK3R94-TI2... [ 2017-06-14 14:11:14 ] INFO Separating transcripts (UTR regions) per gene for GK3R95-TI3... [ 2017-06-14 14:11:38 ] INFO Separating transcripts (UTR regions) per gene for GK3R96-UI1... [ 2017-06-14 14:12:02 ] INFO Separating transcripts (UTR regions) per gene for GK3R97-UI2... [ 2017-06-14 14:12:26 ] INFO Separating transcripts (UTR regions) per gene for GK3R98-UI3... [ 2017-06-14 14:12:51 ] INFO Separating transcripts (UTR regions) per gene for GK3R87-GIH1... [ 2017-06-14 14:13:14 ] INFO Separating transcripts (UTR regions) per gene for GK3R89-GIH3... [ 2017-06-14 14:13:38 ] INFO Saving gene model to /data/images/proton/run340/www/metaseqr_quantseq_run340_without_GIH2_stranded/data/gene_model.RData [ 2017-06-14 14:13:41 ] INFO Summarizing count data... [ 2017-06-14 14:13:55 ] INFO Removing genes with zero counts in all samples... [ 2017-06-14 14:13:55 ] INFO Normalizing with: deseq [ 2017-06-14 14:13:55 ] INFO Applying gene filter length... [ 2017-06-14 14:13:55 ] INFO Threshold below which ignored: 500 [ 2017-06-14 14:13:55 ] INFO Applying gene filter avg.reads... [ 2017-06-14 14:13:55 ] INFO Threshold below which ignored: 0.0233644859813084 [ 2017-06-14 14:13:55 ] INFO Applying gene filter expression... [ 2017-06-14 14:13:56 ] INFO Threshold below which ignored: 3 [ 2017-06-14 14:13:56 ] INFO Applying gene filter biotype... [ 2017-06-14 14:13:56 ] INFO Biotypes ignored: rRNA, IG_V_pseudogene, TR_V_pseudogene [ 2017-06-14 14:13:56 ] INFO 33432 genes filtered out [ 2017-06-14 14:13:56 ] INFO 18357 genes remain after filtering [ 2017-06-14 14:13:56 ] INFO Running statistical tests with: deseq [ 2017-06-14 14:13:57 ] INFO Contrast: UI_vs_TI [ 2017-06-14 14:14:07 ] INFO Contrast: UI_vs_GIH [ 2017-06-14 14:14:18 ] INFO Contrast: UI_vs_GIL [ 2017-06-14 14:14:31 ] INFO Contrast: TI_vs_GIH [ 2017-06-14 14:14:40 ] INFO Contrast: TI_vs_GIL [ 2017-06-14 14:14:53 ] INFO Contrast: GIH_vs_GIL [ 2017-06-14 14:15:05 ] INFO Contrast UI_vs_TI: found 1480 genes [ 2017-06-14 14:15:05 ] INFO Contrast UI_vs_GIH: found 1498 genes [ 2017-06-14 14:15:05 ] INFO Contrast UI_vs_GIL: found 1989 genes [ 2017-06-14 14:15:05 ] INFO Contrast TI_vs_GIH: found 455 genes [ 2017-06-14 14:15:05 ] INFO Contrast TI_vs_GIL: found 517 genes [ 2017-06-14 14:15:05 ] INFO Contrast GIH_vs_GIL: found 186 genes [ 2017-06-14 14:15:05 ] INFO Exporting and compressing normalized read counts table to /data/images/proton/run340/www/metaseqr_quantseq_run340_without_GIH2_stranded/lists/normalized_counts_table.txt [ 2017-06-14 14:15:07 ] INFO Building output files... [ 2017-06-14 14:15:09 ] INFO Contrast: UI_vs_TI [ 2017-06-14 14:15:09 ] INFO Adding non-filtered data... [ 2017-06-14 14:15:09 ] INFO binding annotation... [ 2017-06-14 14:15:10 ] INFO binding p-values... [ 2017-06-14 14:15:10 ] INFO binding FDRs... [ 2017-06-14 14:15:10 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:10 ] INFO binding all normalized counts for UI... [ 2017-06-14 14:15:11 ] INFO binding all normalized counts for TI... [ 2017-06-14 14:15:12 ] INFO binding filtering flags... [ 2017-06-14 14:15:13 ] INFO Writing output... [ 2017-06-14 14:15:13 ] INFO Adding filtered data... [ 2017-06-14 14:15:13 ] INFO binding annotation... [ 2017-06-14 14:15:13 ] INFO binding p-values... [ 2017-06-14 14:15:13 ] INFO binding FDRs... [ 2017-06-14 14:15:13 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:13 ] INFO binding all normalized counts for UI... [ 2017-06-14 14:15:13 ] INFO binding all normalized counts for TI... [ 2017-06-14 14:15:13 ] INFO binding filtering flags... [ 2017-06-14 14:15:14 ] INFO Writing output... [ 2017-06-14 14:15:16 ] INFO Contrast: UI_vs_GIH [ 2017-06-14 14:15:16 ] INFO Adding non-filtered data... [ 2017-06-14 14:15:16 ] INFO binding annotation... [ 2017-06-14 14:15:17 ] INFO binding p-values... [ 2017-06-14 14:15:17 ] INFO binding FDRs... [ 2017-06-14 14:15:18 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:18 ] INFO binding all normalized counts for UI... [ 2017-06-14 14:15:19 ] INFO binding all normalized counts for GIH... [ 2017-06-14 14:15:20 ] INFO binding filtering flags... [ 2017-06-14 14:15:21 ] INFO Writing output... [ 2017-06-14 14:15:21 ] INFO Adding filtered data... [ 2017-06-14 14:15:21 ] INFO binding annotation... [ 2017-06-14 14:15:21 ] INFO binding p-values... [ 2017-06-14 14:15:21 ] INFO binding FDRs... [ 2017-06-14 14:15:21 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:21 ] INFO binding all normalized counts for UI... [ 2017-06-14 14:15:21 ] INFO binding all normalized counts for GIH... [ 2017-06-14 14:15:21 ] INFO binding filtering flags... [ 2017-06-14 14:15:22 ] INFO Writing output... [ 2017-06-14 14:15:24 ] INFO Contrast: UI_vs_GIL [ 2017-06-14 14:15:24 ] INFO Adding non-filtered data... [ 2017-06-14 14:15:24 ] INFO binding annotation... [ 2017-06-14 14:15:25 ] INFO binding p-values... [ 2017-06-14 14:15:25 ] INFO binding FDRs... [ 2017-06-14 14:15:25 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:25 ] INFO binding all normalized counts for UI... [ 2017-06-14 14:15:26 ] INFO binding all normalized counts for GIL... [ 2017-06-14 14:15:27 ] INFO binding filtering flags... [ 2017-06-14 14:15:28 ] INFO Writing output... [ 2017-06-14 14:15:28 ] INFO Adding filtered data... [ 2017-06-14 14:15:28 ] INFO binding annotation... [ 2017-06-14 14:15:28 ] INFO binding p-values... [ 2017-06-14 14:15:28 ] INFO binding FDRs... [ 2017-06-14 14:15:28 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:28 ] INFO binding all normalized counts for UI... [ 2017-06-14 14:15:28 ] INFO binding all normalized counts for GIL... [ 2017-06-14 14:15:28 ] INFO binding filtering flags... [ 2017-06-14 14:15:30 ] INFO Writing output... [ 2017-06-14 14:15:32 ] INFO Contrast: TI_vs_GIH [ 2017-06-14 14:15:32 ] INFO Adding non-filtered data... [ 2017-06-14 14:15:32 ] INFO binding annotation... [ 2017-06-14 14:15:33 ] INFO binding p-values... [ 2017-06-14 14:15:33 ] INFO binding FDRs... [ 2017-06-14 14:15:33 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:34 ] INFO binding all normalized counts for TI... [ 2017-06-14 14:15:34 ] INFO binding all normalized counts for GIH... [ 2017-06-14 14:15:35 ] INFO binding filtering flags... [ 2017-06-14 14:15:35 ] INFO Writing output... [ 2017-06-14 14:15:35 ] INFO Adding filtered data... [ 2017-06-14 14:15:35 ] INFO binding annotation... [ 2017-06-14 14:15:35 ] INFO binding p-values... [ 2017-06-14 14:15:35 ] INFO binding FDRs... [ 2017-06-14 14:15:36 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:36 ] INFO binding all normalized counts for TI... [ 2017-06-14 14:15:36 ] INFO binding all normalized counts for GIH... [ 2017-06-14 14:15:36 ] INFO binding filtering flags... [ 2017-06-14 14:15:37 ] INFO Writing output... [ 2017-06-14 14:15:39 ] INFO Contrast: TI_vs_GIL [ 2017-06-14 14:15:39 ] INFO Adding non-filtered data... [ 2017-06-14 14:15:39 ] INFO binding annotation... [ 2017-06-14 14:15:40 ] INFO binding p-values... [ 2017-06-14 14:15:40 ] INFO binding FDRs... [ 2017-06-14 14:15:40 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:40 ] INFO binding all normalized counts for TI... [ 2017-06-14 14:15:41 ] INFO binding all normalized counts for GIL... [ 2017-06-14 14:15:41 ] INFO binding filtering flags... [ 2017-06-14 14:15:42 ] INFO Writing output... [ 2017-06-14 14:15:42 ] INFO Adding filtered data... [ 2017-06-14 14:15:42 ] INFO binding annotation... [ 2017-06-14 14:15:42 ] INFO binding p-values... [ 2017-06-14 14:15:42 ] INFO binding FDRs... [ 2017-06-14 14:15:43 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:43 ] INFO binding all normalized counts for TI... [ 2017-06-14 14:15:43 ] INFO binding all normalized counts for GIL... [ 2017-06-14 14:15:43 ] INFO binding filtering flags... [ 2017-06-14 14:15:44 ] INFO Writing output... [ 2017-06-14 14:15:46 ] INFO Contrast: GIH_vs_GIL [ 2017-06-14 14:15:46 ] INFO Adding non-filtered data... [ 2017-06-14 14:15:46 ] INFO binding annotation... [ 2017-06-14 14:15:47 ] INFO binding p-values... [ 2017-06-14 14:15:47 ] INFO binding FDRs... [ 2017-06-14 14:15:48 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:48 ] INFO binding all normalized counts for GIH... [ 2017-06-14 14:15:48 ] INFO binding all normalized counts for GIL... [ 2017-06-14 14:15:49 ] INFO binding filtering flags... [ 2017-06-14 14:15:49 ] INFO Writing output... [ 2017-06-14 14:15:49 ] INFO Adding filtered data... [ 2017-06-14 14:15:49 ] INFO binding annotation... [ 2017-06-14 14:15:49 ] INFO binding p-values... [ 2017-06-14 14:15:49 ] INFO binding FDRs... [ 2017-06-14 14:15:50 ] INFO binding log2 normalized fold changes... [ 2017-06-14 14:15:50 ] INFO binding all normalized counts for GIH... [ 2017-06-14 14:15:50 ] INFO binding all normalized counts for GIL... [ 2017-06-14 14:15:50 ] INFO binding filtering flags... [ 2017-06-14 14:15:51 ] INFO Writing output... [ 2017-06-14 14:15:53 ] INFO Creating quality control graphs... [ 2017-06-14 14:15:53 ] INFO Plotting in png format... [ 2017-06-14 14:15:53 ] INFO Plotting mds... [ 2017-06-14 14:15:53 ] INFO Plotting biodetection... [ 2017-06-14 14:15:55 ] INFO Plotting countsbio... [ 2017-06-14 14:15:57 ] INFO Plotting saturation... [ 2017-06-14 14:16:09 ] INFO Plotting readnoise... [ 2017-06-14 14:16:12 ] INFO Plotting correl... [ 2017-06-14 14:16:13 ] INFO Plotting pairwise... [ 2017-06-14 14:16:59 ] INFO Plotting boxplot... [ 2017-06-14 14:16:59 ] INFO Plotting gcbias... [ 2017-06-14 14:17:01 ] INFO Plotting lengthbias... [ 2017-06-14 14:17:02 ] INFO Plotting boxplot... [ 2017-06-14 14:17:02 ] INFO Plotting gcbias... [ 2017-06-14 14:17:03 ] INFO Plotting lengthbias... [ 2017-06-14 14:17:05 ] INFO Plotting biodist... [ 2017-06-14 14:17:05 ] INFO Contrast: UI_vs_TI [ 2017-06-14 14:17:05 ] INFO Contrast: UI_vs_GIH [ 2017-06-14 14:17:05 ] INFO Contrast: UI_vs_GIL [ 2017-06-14 14:17:06 ] INFO Contrast: TI_vs_GIH [ 2017-06-14 14:17:06 ] INFO Contrast: TI_vs_GIL [ 2017-06-14 14:17:06 ] INFO Contrast: GIH_vs_GIL [ 2017-06-14 14:17:07 ] INFO Plotting volcano... [ 2017-06-14 14:17:07 ] INFO Contrast: UI_vs_TI [ 2017-06-14 14:17:07 ] INFO Contrast: UI_vs_GIH [ 2017-06-14 14:17:08 ] INFO Contrast: UI_vs_GIL [ 2017-06-14 14:17:09 ] INFO Contrast: TI_vs_GIH [ 2017-06-14 14:17:09 ] INFO Contrast: TI_vs_GIL [ 2017-06-14 14:17:10 ] INFO Contrast: GIH_vs_GIL [ 2017-06-14 14:17:11 ] INFO Plotting deheatmap... [ 2017-06-14 14:17:11 ] INFO Contrast: UI_vs_TI [ 2017-06-14 14:18:03 ] INFO Contrast: UI_vs_GIH [ 2017-06-14 14:18:52 ] INFO Contrast: UI_vs_GIL [ 2017-06-14 14:19:42 ] INFO Contrast: TI_vs_GIH [ 2017-06-14 14:20:32 ] INFO Contrast: TI_vs_GIL [ 2017-06-14 14:21:21 ] INFO Contrast: GIH_vs_GIL [ 2017-06-14 14:22:11 ] INFO Plotting filtered... [ 2017-06-14 14:22:11 ] INFO Plotting in pdf format... [ 2017-06-14 14:22:11 ] INFO Plotting mds... [ 2017-06-14 14:22:11 ] INFO Plotting biodetection... [ 2017-06-14 14:22:12 ] INFO Plotting countsbio... [ 2017-06-14 14:22:13 ] INFO Plotting saturation... [ 2017-06-14 14:22:21 ] INFO Plotting readnoise... [ 2017-06-14 14:22:25 ] INFO Plotting correl... [ 2017-06-14 14:22:25 ] INFO Plotting pairwise... [ 2017-06-14 14:22:48 ] INFO Plotting boxplot... [ 2017-06-14 14:22:49 ] INFO Plotting gcbias... [ 2017-06-14 14:22:50 ] INFO Plotting lengthbias... [ 2017-06-14 14:22:51 ] INFO Plotting boxplot... [ 2017-06-14 14:22:51 ] INFO Plotting gcbias... [ 2017-06-14 14:22:53 ] INFO Plotting lengthbias... [ 2017-06-14 14:22:54 ] INFO Plotting biodist... [ 2017-06-14 14:22:54 ] INFO Contrast: UI_vs_TI [ 2017-06-14 14:22:55 ] INFO Contrast: UI_vs_GIH [ 2017-06-14 14:22:55 ] INFO Contrast: UI_vs_GIL [ 2017-06-14 14:22:55 ] INFO Contrast: TI_vs_GIH [ 2017-06-14 14:22:55 ] INFO Contrast: TI_vs_GIL [ 2017-06-14 14:22:56 ] INFO Contrast: GIH_vs_GIL [ 2017-06-14 14:22:56 ] INFO Plotting volcano... [ 2017-06-14 14:22:56 ] INFO Contrast: UI_vs_TI [ 2017-06-14 14:22:56 ] INFO Contrast: UI_vs_GIH [ 2017-06-14 14:22:56 ] INFO Contrast: UI_vs_GIL [ 2017-06-14 14:22:57 ] INFO Contrast: TI_vs_GIH [ 2017-06-14 14:22:57 ] INFO Contrast: TI_vs_GIL [ 2017-06-14 14:22:57 ] INFO Contrast: GIH_vs_GIL [ 2017-06-14 14:22:58 ] INFO Plotting deheatmap... [ 2017-06-14 14:22:58 ] INFO Contrast: UI_vs_TI [ 2017-06-14 14:23:53 ] INFO Contrast: UI_vs_GIH [ 2017-06-14 14:24:42 ] INFO Contrast: UI_vs_GIL [ 2017-06-14 14:25:31 ] INFO Contrast: TI_vs_GIH [ 2017-06-14 14:26:22 ] INFO Contrast: TI_vs_GIL [ 2017-06-14 14:27:13 ] INFO Contrast: GIH_vs_GIL [ 2017-06-14 14:28:01 ] INFO Plotting filtered... [ 2017-06-14 14:28:01 ] INFO Creating HTML report... [ 2017-06-14 14:28:01 ] INFO Compressing figures...
Multidimensional scaling
Biotype detection
Biotype detection counts
Read and biotype saturation
RNA-Seq reads noise
Correlation plots
Pairwise scatterplots
Boxplots
GC content bias
Gene/transcript length bias
Chromosome and biotype distribution of filtered genes
Volcano plots
DEG heatmaps
Chromosome and biotype distributions of DEGs
Results
DEG table for the contrast UI_vs_TIThe following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast UI_vs_TI. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | log2_normalized_fold_change_UI_vs_TI | log2_normalized_counts_GK3R96-UI1 | log2_normalized_counts_GK3R97-UI2 | log2_normalized_counts_GK3R98-UI3 | rpgm_normalized_counts_GK3R96-UI1 | rpgm_normalized_counts_GK3R97-UI2 | rpgm_normalized_counts_GK3R98-UI3 | log2_normalized_counts_GK3R93-TI1 | log2_normalized_counts_GK3R94-TI2 | log2_normalized_counts_GK3R95-TI3 | rpgm_normalized_counts_GK3R93-TI1 | rpgm_normalized_counts_GK3R94-TI2 | rpgm_normalized_counts_GK3R95-TI3 | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr19 | 36111965 | 36119844 | ENSMUSG00000024803 | 0.4397 | - | Ankrd1 | protein_coding | 7.85e-14 | 1.44e-09 | -9.90489 | 1.11e+01 | 7.95e+00 | 8.85e+00 | 1.09e+00 | 1.23e-01 | 2.32e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 171518122 | 171535294 | ENSMUSG00000038209 | 0.4250 | - | Itln1 | protein_coding | 1.02e-12 | 7.29e-09 | -8.24132 | 0.00e+00 | 1.22e+01 | 9.41e+00 | 0.00e+00 | 1.82e+00 | 2.59e-01 | 0.00e+00 | 3.32e+00 | 2.81e+00 | 0.00e+00 | 3.43e-03 | 2.29e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21427411 | 21428391 | ENSMUSG00000094662 | 0.4139 | + | Defa36 | protein_coding | 1.51e-12 | 7.29e-09 | -7.60891 | 0.00e+00 | 1.11e+01 | 9.25e+00 | 0.00e+00 | 1.58e+00 | 4.52e-01 | 1.58e+00 | 3.00e+00 | 1.58e+00 | 1.49e-03 | 5.20e-03 | 1.49e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 173274382 | 173277777 | ENSMUSG00000079180 | 0.4031 | - | Mptx2 | protein_coding | 1.70e-12 | 7.29e-09 | -8.31892 | 0.00e+00 | 9.60e+00 | 7.50e+00 | 0.00e+00 | 5.82e-01 | 1.35e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21391811 | 21392791 | ENSMUSG00000094362 | 0.4465 | + | Defa33 | protein_coding | 2.30e-12 | 7.29e-09 | -7.47573 | 0.00e+00 | 1.17e+01 | 9.76e+00 | 0.00e+00 | 2.40e+00 | 6.46e-01 | 1.58e+00 | 4.17e+00 | 1.00e+00 | 1.49e-03 | 1.26e-02 | 7.43e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21162277 | 21163249 | ENSMUSG00000074443 | 0.4378 | + | Defa22 | protein_coding | 2.38e-12 | 7.29e-09 | -8.94251 | 3.00e+00 | 1.29e+01 | 1.06e+01 | 5.20e-03 | 5.79e+00 | 1.15e+00 | 0.00e+00 | 2.00e+00 | 3.81e+00 | 0.00e+00 | 2.23e-03 | 9.66e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21529032 | 21530012 | ENSMUSG00000094818 | 0.4455 | + | Defa32 | protein_coding | 5.63e-12 | 1.48e-08 | -7.77755 | 0.00e+00 | 1.24e+01 | 1.04e+01 | 0.00e+00 | 4.02e+00 | 1.03e+00 | 2.58e+00 | 4.09e+00 | 3.00e+00 | 3.71e-03 | 1.19e-02 | 5.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21565386 | 21566349 | ENSMUSG00000065956 | 0.4118 | + | Defa37 | protein_coding | 6.55e-12 | 1.50e-08 | -7.33882 | 0.00e+00 | 1.17e+01 | 9.84e+00 | 0.00e+00 | 2.45e+00 | 6.81e-01 | 1.58e+00 | 4.17e+00 | 2.32e+00 | 1.49e-03 | 1.26e-02 | 2.97e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21025545 | 21026516 | ENSMUSG00000074447 | 0.4414 | + | Defa21 | protein_coding | 1.13e-11 | 2.30e-08 | -8.19693 | 3.00e+00 | 1.31e+01 | 1.03e+01 | 5.20e-03 | 6.45e+00 | 9.58e-01 | 0.00e+00 | 4.39e+00 | 3.58e+00 | 0.00e+00 | 1.49e-02 | 8.18e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21655780 | 21656735 | ENSMUSG00000060208 | 0.4404 | + | Defa17 | protein_coding | 1.33e-11 | 2.45e-08 | -7.52042 | 3.91e+00 | 1.24e+01 | 1.01e+01 | 1.04e-02 | 3.96e+00 | 8.02e-01 | 3.46e+00 | 3.91e+00 | 3.17e+00 | 7.43e-03 | 1.04e-02 | 5.94e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 117287797 | 117292868 | ENSMUSG00000069515 | 0.4608 | - | Lyz1 | protein_coding | 1.48e-11 | 2.46e-08 | -6.81792 | 0.00e+00 | 1.04e+01 | 9.09e+00 | 0.00e+00 | 6.73e-01 | 2.66e-01 | 3.46e+00 | 2.00e+00 | 1.00e+00 | 4.91e-03 | 1.47e-03 | 4.91e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21191614 | 21192549 | ENSMUSG00000074442 | 0.4295 | + | Defa31 | protein_coding | 2.52e-11 | 3.65e-08 | -7.29024 | 0.00e+00 | 1.14e+01 | 9.16e+00 | 0.00e+00 | 2.01e+00 | 4.25e-01 | 0.00e+00 | 3.46e+00 | 3.17e+00 | 0.00e+00 | 7.42e-03 | 5.94e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21325887 | 21327020 | ENSMUSG00000074437 | 0.4321 | - | Defa29 | protein_coding | 2.58e-11 | 3.65e-08 | -7.02338 | 0.00e+00 | 1.02e+01 | 7.82e+00 | 0.00e+00 | 8.82e-01 | 1.65e-01 | 0.00e+00 | 3.00e+00 | 1.00e+00 | 0.00e+00 | 5.13e-03 | 7.33e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21055047 | 21056016 | ENSMUSG00000074446 | 0.4340 | + | Defa23 | protein_coding | 3.08e-11 | 4.04e-08 | -7.09182 | 0.00e+00 | 1.08e+01 | 8.92e+00 | 0.00e+00 | 1.36e+00 | 3.58e-01 | 1.58e+00 | 2.81e+00 | 2.81e+00 | 1.48e-03 | 4.45e-03 | 4.45e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21734494 | 21735471 | ENSMUSG00000064213 | 0.4325 | + | Defa24 | protein_coding | 3.90e-11 | 4.78e-08 | -8.02703 | 3.00e+00 | 1.32e+01 | 1.11e+01 | 5.20e-03 | 6.88e+00 | 1.64e+00 | 0.00e+00 | 4.81e+00 | 3.91e+00 | 0.00e+00 | 2.01e-02 | 1.04e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21378515 | 21379495 | ENSMUSG00000096295 | 0.4455 | + | Defa2 | protein_coding | 4.98e-11 | 5.71e-08 | -7.07187 | 3.00e+00 | 1.24e+01 | 1.05e+01 | 5.20e-03 | 4.15e+00 | 1.04e+00 | 1.58e+00 | 5.39e+00 | 2.81e+00 | 1.49e-03 | 3.05e-02 | 4.46e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21509258 | 21510237 | ENSMUSG00000095066 | 0.4459 | + | Defa20 | protein_coding | 6.46e-11 | 6.98e-08 | -7.32860 | 0.00e+00 | 1.29e+01 | 1.09e+01 | 0.00e+00 | 5.50e+00 | 1.43e+00 | 3.70e+00 | 5.17e+00 | 3.17e+00 | 8.92e-03 | 2.60e-02 | 5.94e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21455445 | 21456560 | ENSMUSG00000079114 | 0.4265 | - | Gm7849 | protein_coding | 9.76e-11 | 9.66e-08 | -6.49926 | 0.00e+00 | 1.16e+01 | 9.33e+00 | 0.00e+00 | 2.28e+00 | 4.76e-01 | 1.58e+00 | 5.13e+00 | 1.58e+00 | 1.49e-03 | 2.53e-02 | 1.49e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21134642 | 21135598 | ENSMUSG00000074444 | 0.4316 | + | Defa30 | protein_coding | 1.00e-10 | 9.66e-08 | -7.00296 | 0.00e+00 | 1.19e+01 | 1.00e+01 | 0.00e+00 | 2.85e+00 | 7.67e-01 | 0.00e+00 | 4.58e+00 | 3.70e+00 | 0.00e+00 | 1.71e-02 | 8.91e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21593375 | 21594508 | ENSMUSG00000079113 | 0.4250 | - | Gm7861 | protein_coding | 1.72e-10 | 1.58e-07 | -6.85353 | 3.00e+00 | 1.24e+01 | 9.97e+00 | 5.13e-03 | 4.00e+00 | 7.37e-01 | 3.00e+00 | 5.13e+00 | 3.70e+00 | 5.13e-03 | 2.49e-02 | 8.80e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21095074 | 21096050 | ENSMUSG00000061958 | 0.4289 | - | Gm14851 | protein_coding | 2.38e-10 | 2.08e-07 | -6.34228 | 0.00e+00 | 1.06e+01 | 7.71e+00 | 0.00e+00 | 1.26e+00 | 1.66e-01 | 0.00e+00 | 4.17e+00 | 1.58e+00 | 0.00e+00 | 1.36e-02 | 1.60e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21665797 | 21666732 | ENSMUSG00000063206 | 0.4071 | + | Defa34 | protein_coding | 2.63e-10 | 2.19e-07 | -6.23374 | 0.00e+00 | 1.12e+01 | 9.09e+00 | 0.00e+00 | 1.78e+00 | 4.04e-01 | 0.00e+00 | 5.09e+00 | 2.00e+00 | 0.00e+00 | 2.45e-02 | 2.23e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21297439 | 21298375 | ENSMUSG00000074439 | 0.4130 | + | Defa5 | protein_coding | 3.08e-10 | 2.46e-07 | -6.44817 | 0.00e+00 | 1.04e+01 | 8.40e+00 | 0.00e+00 | 9.80e-01 | 2.50e-01 | 0.00e+00 | 3.81e+00 | 2.00e+00 | 0.00e+00 | 9.66e-03 | 2.23e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 25897620 | 25926624 | ENSMUSG00000030483 | 0.4536 | + | Cyp2b10 | protein_coding | 6.29e-10 | 4.81e-07 | 7.66059 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 7.62e+00 | 8.67e+00 | 1.00e+00 | 6.81e-02 | 1.41e-01 | 3.47e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 11375523 | 11392790 | ENSMUSG00000101389 | 0.3817 | + | Ms4a4a | protein_coding | 1.15e-09 | 8.44e-07 | -5.95022 | 3.00e+00 | 1.07e+01 | 9.79e+00 | 5.59e-03 | 1.31e+00 | 7.04e-01 | 1.58e+00 | 5.00e+00 | 2.58e+00 | 1.60e-03 | 2.48e-02 | 3.99e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21287409 | 21288377 | ENSMUSG00000074440 | 0.4427 | + | Defa3 | protein_coding | 1.57e-09 | 1.11e-06 | -6.40939 | 0.00e+00 | 9.70e+00 | 7.57e+00 | 0.00e+00 | 6.15e-01 | 1.40e-01 | 0.00e+00 | 3.00e+00 | 1.58e+00 | 0.00e+00 | 5.20e-03 | 1.49e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 35170991 | 35176068 | ENSMUSG00000024397 | 0.5228 | - | Aif1 | protein_coding | 5.15e-09 | 3.50e-06 | -5.85175 | 6.38e+00 | 1.03e+01 | 9.50e+00 | 2.12e-02 | 3.28e-01 | 1.87e-01 | 0.00e+00 | 4.58e+00 | 3.46e+00 | 0.00e+00 | 5.94e-03 | 2.58e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21065038 | 21065996 | ENSMUSG00000061845 | 0.4150 | + | Defa35 | protein_coding | 5.40e-09 | 3.54e-06 | -6.66838 | 0.00e+00 | 9.09e+00 | 7.38e+00 | 0.00e+00 | 4.06e-01 | 1.23e-01 | 0.00e+00 | 2.00e+00 | 1.00e+00 | 0.00e+00 | 2.24e-03 | 7.46e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 63891264 | 63912297 | ENSMUSG00000055748 | 0.4246 | - | Gsdmc4 | protein_coding | 6.39e-09 | 4.05e-06 | -6.29360 | 0.00e+00 | 8.76e+00 | 8.08e+00 | 0.00e+00 | 2.42e-01 | 1.50e-01 | 0.00e+00 | 2.81e+00 | 0.00e+00 | 0.00e+00 | 3.35e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 63824346 | 63845177 | ENSMUSG00000056293 | 0.4269 | - | Gsdmc2 | protein_coding | 6.70e-09 | 4.10e-06 | -7.28848 | 0.00e+00 | 8.04e+00 | 7.68e+00 | 0.00e+00 | 1.47e-01 | 1.14e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 172893961 | 172895041 | ENSMUSG00000026542 | 0.4265 | - | Apcs | protein_coding | 2.02e-08 | 1.20e-05 | 6.78136 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 6.13e+00 | 8.02e+00 | 0.00e+00 | 4.95e-02 | 1.85e-01 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21702519 | 21703645 | ENSMUSG00000058618 | 0.4295 | - | AY761184 | protein_coding | 2.36e-08 | 1.35e-05 | -5.57399 | 0.00e+00 | 9.59e+00 | 8.11e+00 | 0.00e+00 | 5.66e-01 | 2.02e-01 | 0.00e+00 | 4.17e+00 | 1.58e+00 | 0.00e+00 | 1.25e-02 | 1.47e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 93014205 | 93015687 | ENSMUSG00000027913 | 0.4990 | - | Crct1 | protein_coding | 2.55e-08 | 1.41e-05 | -8.26209 | 9.77e+00 | 3.46e+00 | 5.29e+00 | 5.55e-01 | 6.38e-03 | 2.43e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83587882 | 83593087 | ENSMUSG00000018927 | 0.4368 | - | Ccl6 | protein_coding | 2.62e-08 | 1.41e-05 | -5.97728 | 0.00e+00 | 8.30e+00 | 8.56e+00 | 0.00e+00 | 9.11e-02 | 1.09e-01 | 0.00e+00 | 3.00e+00 | 1.00e+00 | 0.00e+00 | 2.03e-03 | 2.90e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 123229843 | 123247021 | ENSMUSG00000023349 | 0.3844 | + | Clec4n | protein_coding | 3.21e-08 | 1.68e-05 | -6.34873 | 6.60e+00 | 7.48e+00 | 7.74e+00 | 1.47e-02 | 2.71e-02 | 3.27e-02 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 4.60e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164940780 | 164955850 | ENSMUSG00000017737 | 0.5213 | + | Mmp9 | protein_coding | 3.72e-08 | 1.90e-05 | -5.37020 | 3.00e+00 | 9.51e+00 | 9.56e+00 | 1.49e-03 | 1.54e-01 | 1.60e-01 | 0.00e+00 | 4.75e+00 | 3.00e+00 | 0.00e+00 | 5.53e-03 | 1.49e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 107963696 | 107969283 | ENSMUSG00000004038 | 0.4961 | - | Gstm3 | protein_coding | 5.22e-08 | 2.59e-05 | 7.07682 | 0.00e+00 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 5.67e-04 | 1.70e-03 | 7.86e+00 | 9.47e+00 | 0.00e+00 | 1.32e-01 | 4.03e-01 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 39269405 | 39330713 | ENSMUSG00000003053 | 0.3735 | + | Cyp2c29 | protein_coding | 6.78e-08 | 3.27e-05 | 7.73245 | 0.00e+00 | 2.81e+00 | 0.00e+00 | 0.00e+00 | 6.93e-04 | 0.00e+00 | 8.68e+00 | 1.06e+01 | 1.00e+00 | 4.71e-02 | 1.73e-01 | 1.15e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127050156 | 127087328 | ENSMUSG00000049350 | 0.4615 | - | Zg16 | protein_coding | 7.56e-08 | 3.56e-05 | -4.69177 | 0.00e+00 | 1.12e+01 | 9.58e+00 | 0.00e+00 | 8.44e-01 | 2.72e-01 | 0.00e+00 | 6.89e+00 | 1.00e+00 | 0.00e+00 | 4.18e-02 | 3.54e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 103453825 | 103498800 | ENSMUSG00000022488 | 0.4234 | + | Nckap1l | protein_coding | 7.84e-08 | 3.60e-05 | -6.21778 | 0.00e+00 | 7.95e+00 | 8.09e+00 | 0.00e+00 | 9.80e-02 | 1.08e-01 | 2.00e+00 | 0.00e+00 | 1.00e+00 | 1.20e-03 | 0.00e+00 | 3.99e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 121838541 | 121889057 | ENSMUSG00000059908 | 0.3956 | + | Mug1 | protein_coding | 1.06e-07 | 4.76e-05 | 6.69697 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.57e-04 | 0.00e+00 | 6.88e+00 | 8.21e+00 | 0.00e+00 | 1.83e-02 | 4.62e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 122921848 | 122934619 | ENSMUSG00000049037 | 0.4108 | + | Clec4a1 | protein_coding | 1.16e-07 | 5.06e-05 | -6.77479 | 6.13e+00 | 7.42e+00 | 7.62e+00 | 3.55e-02 | 8.74e-02 | 1.01e-01 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 5.14e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 20692953 | 20727562 | ENSMUSG00000024747 | 0.3855 | - | Aldh1a7 | protein_coding | 1.64e-07 | 7.01e-05 | 6.52356 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 5.68e-04 | 5.68e-04 | 7.23e+00 | 8.27e+00 | 0.00e+00 | 8.46e-02 | 1.75e-01 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 4434306 | 4457877 | ENSMUSG00000021210 | 0.3728 | + | Akr1c6 | protein_coding | 1.79e-07 | 7.48e-05 | 5.14419 | 3.00e+00 | 1.00e+00 | 0.00e+00 | 1.05e-03 | 1.50e-04 | 0.00e+00 | 6.98e+00 | 8.02e+00 | 1.58e+00 | 1.88e-02 | 3.89e-02 | 3.00e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 40423815 | 40510268 | ENSMUSG00000039470 | 0.3927 | + | Zdhhc2 | protein_coding | 2.58e-07 | 1.05e-04 | -5.90489 | 1.01e+01 | 7.49e+00 | 7.27e+00 | 1.34e-01 | 2.17e-02 | 1.85e-02 | 3.81e+00 | 3.00e+00 | 1.00e+00 | 1.58e-03 | 8.48e-04 | 1.21e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 41105381 | 41124412 | ENSMUSG00000037798 | 0.4489 | + | Mat1a | protein_coding | 2.65e-07 | 1.06e-04 | 4.58033 | 4.46e+00 | 1.58e+00 | 0.00e+00 | 6.86e-03 | 6.54e-04 | 0.00e+00 | 7.19e+00 | 8.89e+00 | 1.58e+00 | 4.74e-02 | 1.54e-01 | 6.54e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 129364570 | 129371139 | ENSMUSG00000027398 | 0.4534 | - | Il1b | protein_coding | 2.71e-07 | 1.06e-04 | -4.90029 | 0.00e+00 | 9.81e+00 | 1.03e+01 | 0.00e+00 | 2.93e-01 | 4.19e-01 | 4.70e+00 | 4.39e+00 | 4.70e+00 | 8.18e-03 | 6.54e-03 | 8.18e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34305877 | 34316199 | ENSMUSG00000060586 | 0.4846 | + | H2-Eb1 | protein_coding | 3.00e-07 | 1.15e-04 | -4.73553 | 3.00e+00 | 1.06e+01 | 1.20e+01 | 4.48e-03 | 9.87e-01 | 2.65e+00 | 6.29e+00 | 6.77e+00 | 4.75e+00 | 4.92e-02 | 6.91e-02 | 1.66e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 46240696 | 46243459 | ENSMUSG00000032080 | 0.5557 | + | Apoa4 | protein_coding | 3.06e-07 | 1.15e-04 | 4.71149 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 4.93e-03 | 0.00e+00 | 0.00e+00 | 6.25e+00 | 7.53e+00 | 0.00e+00 | 5.28e-02 | 1.29e-01 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 61105572 | 61132149 | ENSMUSG00000024621 | 0.5126 | + | Csf1r | protein_coding | 3.15e-07 | 1.16e-04 | -5.56986 | 6.79e+00 | 7.16e+00 | 8.30e+00 | 3.77e-02 | 4.86e-02 | 1.08e-01 | 1.58e+00 | 3.00e+00 | 0.00e+00 | 6.85e-04 | 2.40e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 40037941 | 40073811 | ENSMUSG00000067225 | 0.3861 | - | Cyp2c54 | protein_coding | 3.37e-07 | 1.21e-04 | 6.32193 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 6.46e-04 | 0.00e+00 | 5.52e+00 | 8.09e+00 | 0.00e+00 | 2.91e-02 | 1.76e-01 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34282744 | 34287827 | ENSMUSG00000036594 | 0.4636 | - | H2-Aa | protein_coding | 3.50e-07 | 1.24e-04 | -5.34408 | 3.91e+00 | 1.18e+01 | 1.30e+01 | 2.77e-03 | 6.96e-01 | 1.66e+00 | 5.67e+00 | 7.55e+00 | 5.78e+00 | 9.89e-03 | 3.70e-02 | 1.07e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34143307 | 34151553 | ENSMUSG00000037548 | 0.4964 | + | H2-DMb2 | protein_coding | 3.89e-07 | 1.35e-04 | -6.74147 | 0.00e+00 | 7.41e+00 | 7.23e+00 | 0.00e+00 | 5.71e-02 | 5.03e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 104146382 | 104153870 | ENSMUSG00000066361 | 0.4806 | - | Serpina3c | protein_coding | 4.21e-07 | 1.43e-04 | 6.02975 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 7.55e+00 | 2.32e+00 | 1.43e-03 | 8.85e-02 | 1.90e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 134220053 | 134229625 | ENSMUSG00000015950 | 0.5368 | - | Ncf1 | protein_coding | 4.40e-07 | 1.47e-04 | -5.54035 | 0.00e+00 | 8.25e+00 | 8.22e+00 | 0.00e+00 | 5.38e-02 | 5.27e-02 | 3.00e+00 | 0.00e+00 | 2.00e+00 | 1.24e-03 | 0.00e+00 | 5.31e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 108343354 | 108414396 | ENSMUSG00000000049 | 0.4383 | + | Apoh | protein_coding | 4.73e-07 | 1.55e-04 | 6.62571 | 0.00e+00 | 1.58e+00 | 2.00e+00 | 0.00e+00 | 5.11e-04 | 7.67e-04 | 7.70e+00 | 9.18e+00 | 0.00e+00 | 5.29e-02 | 1.48e-01 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 134600022 | 134615025 | ENSMUSG00000040751 | 0.5223 | - | Lat2 | protein_coding | 4.99e-07 | 1.61e-04 | -4.85638 | 6.49e+00 | 9.29e+00 | 7.50e+00 | 1.28e-02 | 8.97e-02 | 2.58e-02 | 4.58e+00 | 0.00e+00 | 2.58e+00 | 3.30e-03 | 0.00e+00 | 7.17e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 89199209 | 89207827 | ENSMUSG00000089929 | 0.3732 | + | Bcl2a1b | protein_coding | 5.40e-07 | 1.71e-04 | -6.03067 | 0.00e+00 | 7.81e+00 | 8.21e+00 | 0.00e+00 | 1.60e-01 | 2.12e-01 | 1.58e+00 | 0.00e+00 | 2.00e+00 | 1.43e-03 | 0.00e+00 | 2.14e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 145003817 | 145032776 | ENSMUSG00000028255 | 0.4281 | - | Clca1 | protein_coding | 5.74e-07 | 1.78e-04 | -4.88874 | 0.00e+00 | 9.00e+00 | 7.62e+00 | 0.00e+00 | 1.51e-01 | 5.79e-02 | 0.00e+00 | 4.46e+00 | 0.00e+00 | 0.00e+00 | 6.20e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 140724127 | 140761439 | ENSMUSG00000050022 | 0.5181 | + | Amz1 | protein_coding | 6.13e-07 | 1.88e-04 | -6.26946 | 0.00e+00 | 7.58e+00 | 8.44e+00 | 0.00e+00 | 1.66e-02 | 3.01e-02 | 0.00e+00 | 0.00e+00 | 2.32e+00 | 0.00e+00 | 0.00e+00 | 3.48e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34153072 | 34160230 | ENSMUSG00000079547 | 0.4883 | + | H2-DMb1 | protein_coding | 7.09e-07 | 2.13e-04 | -4.74211 | 3.00e+00 | 1.08e+01 | 1.07e+01 | 4.54e-03 | 1.12e+00 | 1.06e+00 | 3.70e+00 | 6.02e+00 | 5.58e+00 | 7.78e-03 | 4.15e-02 | 3.05e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 134082448 | 134095082 | ENSMUSG00000000682 | 0.4953 | - | Cd52 | protein_coding | 7.52e-07 | 2.23e-04 | -4.58436 | 7.48e+00 | 1.13e+01 | 1.10e+01 | 4.51e-02 | 6.43e-01 | 5.20e-01 | 6.79e+00 | 5.25e+00 | 5.64e+00 | 2.79e-02 | 9.37e-03 | 1.24e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 39007019 | 39042693 | ENSMUSG00000025002 | 0.4127 | + | Cyp2c55 | protein_coding | 7.75e-07 | 2.26e-04 | 5.80735 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 4.95e+00 | 7.09e+00 | 0.00e+00 | 1.72e-02 | 7.73e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 40074079 | 40125231 | ENSMUSG00000026073 | 0.4529 | + | Il1r2 | protein_coding | 8.82e-07 | 2.52e-04 | -4.73335 | 0.00e+00 | 9.31e+00 | 8.75e+00 | 0.00e+00 | 6.64e-02 | 4.51e-02 | 4.00e+00 | 3.32e+00 | 3.81e+00 | 1.58e-03 | 9.45e-04 | 1.37e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 43408204 | 43418358 | ENSMUSG00000030468 | 0.4884 | + | Siglecg | protein_coding | 8.92e-07 | 2.52e-04 | -6.89885 | 7.54e+00 | 5.86e+00 | 6.83e+00 | 4.39e-02 | 1.35e-02 | 2.68e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 11313812 | 11320074 | ENSMUSG00000022496 | 0.4669 | + | Tnfrsf17 | protein_coding | 9.95e-07 | 2.77e-04 | -5.33985 | 0.00e+00 | 8.14e+00 | 7.67e+00 | 0.00e+00 | 2.05e-01 | 1.48e-01 | 3.17e+00 | 0.00e+00 | 1.00e+00 | 5.85e-03 | 0.00e+00 | 7.31e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 137981520 | 137990233 | ENSMUSG00000037053 | 0.4519 | + | Azgp1 | protein_coding | 1.02e-06 | 2.79e-04 | 3.99469 | 3.91e+00 | 0.00e+00 | 0.00e+00 | 2.55e-03 | 0.00e+00 | 0.00e+00 | 6.04e+00 | 7.67e+00 | 0.00e+00 | 1.18e-02 | 3.69e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 51213708 | 51240080 | ENSMUSG00000032053 | 0.4270 | + | Pou2af1 | protein_coding | 1.04e-06 | 2.79e-04 | -5.20486 | 4.46e+00 | 7.81e+00 | 8.57e+00 | 7.11e-03 | 7.59e-02 | 1.28e-01 | 1.58e+00 | 3.32e+00 | 2.00e+00 | 6.78e-04 | 3.05e-03 | 1.02e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 7197782 | 7202546 | ENSMUSG00000020429 | 0.4886 | + | Igfbp1 | protein_coding | 1.05e-06 | 2.79e-04 | 6.39232 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 7.25e+00 | 6.63e+00 | 0.00e+00 | 8.48e-02 | 5.50e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 11586604 | 11604849 | ENSMUSG00000024679 | 0.4128 | - | Ms4a6d | protein_coding | 1.08e-06 | 2.80e-04 | -6.52356 | 4.81e+00 | 6.91e+00 | 7.00e+00 | 9.04e-03 | 3.99e-02 | 4.25e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 41191434 | 41215156 | ENSMUSG00000031594 | 0.3977 | - | Fgl1 | protein_coding | 1.08e-06 | 2.80e-04 | 4.29425 | 5.39e+00 | 2.81e+00 | 0.00e+00 | 1.58e-02 | 2.32e-03 | 0.00e+00 | 6.49e+00 | 9.80e+00 | 1.00e+00 | 3.43e-02 | 3.43e-01 | 3.86e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 136895917 | 136898803 | ENSMUSG00000036887 | 0.5535 | - | C1qa | protein_coding | 1.31e-06 | 3.31e-04 | -4.52068 | 6.60e+00 | 1.16e+01 | 1.12e+01 | 6.45e-02 | 2.07e+00 | 1.57e+00 | 5.86e+00 | 6.94e+00 | 5.88e+00 | 3.83e-02 | 8.19e-02 | 3.90e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 128129547 | 128150657 | ENSMUSG00000030789 | 0.4841 | + | Itgax | protein_coding | 1.32e-06 | 3.31e-04 | -4.69647 | 0.00e+00 | 8.26e+00 | 8.71e+00 | 0.00e+00 | 5.22e-02 | 7.15e-02 | 0.00e+00 | 4.64e+00 | 1.00e+00 | 0.00e+00 | 4.11e-03 | 1.71e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 24336853 | 24351494 | ENSMUSG00000026981 | 0.4277 | + | Il1rn | protein_coding | 1.35e-06 | 3.36e-04 | -3.84581 | 5.98e+00 | 1.02e+01 | 9.98e+00 | 1.06e-02 | 2.01e-01 | 1.73e-01 | 7.16e+00 | 2.81e+00 | 2.58e+00 | 2.44e-02 | 1.03e-03 | 8.58e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for UI_vs_TI.Download the whole result list for UI_vs_TI.DEG table for the contrast UI_vs_GIHThe following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast UI_vs_GIH. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | log2_normalized_fold_change_UI_vs_GIH | log2_normalized_counts_GK3R96-UI1 | log2_normalized_counts_GK3R97-UI2 | log2_normalized_counts_GK3R98-UI3 | rpgm_normalized_counts_GK3R96-UI1 | rpgm_normalized_counts_GK3R97-UI2 | rpgm_normalized_counts_GK3R98-UI3 | log2_normalized_counts_GK3R87-GIH1 | log2_normalized_counts_GK3R89-GIH3 | rpgm_normalized_counts_GK3R87-GIH1 | rpgm_normalized_counts_GK3R89-GIH3 | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr7 | 127050156 | 127087328 | ENSMUSG00000049350 | 0.4615 | - | Zg16 | protein_coding | 1.83e-13 | 3.36e-09 | -9.45258 | 0.00e+00 | 1.12e+01 | 9.58e+00 | 0.00e+00 | 8.44e-01 | 2.72e-01 | 1.00e+00 | 0.00e+00 | 3.54e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 25897620 | 25926624 | ENSMUSG00000030483 | 0.4536 | + | Cyp2b10 | protein_coding | 5.24e-13 | 4.81e-09 | 9.02375 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 9.42e+00 | 8.48e+00 | 2.38e-01 | 1.23e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 46240696 | 46243459 | ENSMUSG00000032080 | 0.5557 | + | Apoa4 | protein_coding | 1.69e-12 | 1.03e-08 | 7.50978 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 4.93e-03 | 0.00e+00 | 0.00e+00 | 1.01e+01 | 6.34e+00 | 7.97e-01 | 5.63e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 171518122 | 171535294 | ENSMUSG00000038209 | 0.4250 | - | Itln1 | protein_coding | 3.63e-12 | 1.67e-08 | -9.01893 | 0.00e+00 | 1.22e+01 | 9.41e+00 | 0.00e+00 | 1.82e+00 | 2.59e-01 | 2.32e+00 | 1.00e+00 | 1.52e-03 | 3.81e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 107963696 | 107969283 | ENSMUSG00000004038 | 0.4961 | - | Gstm3 | protein_coding | 2.87e-11 | 1.05e-07 | 8.69423 | 0.00e+00 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 5.67e-04 | 1.70e-03 | 1.08e+01 | 7.35e+00 | 1.00e+00 | 9.19e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 78370657 | 78373466 | ENSMUSG00000071356 | 0.4171 | + | Reg3b | protein_coding | 9.28e-11 | 2.72e-07 | -8.27716 | 0.00e+00 | 1.06e+01 | 1.02e+01 | 0.00e+00 | 5.80e-01 | 4.47e-01 | 2.32e+00 | 0.00e+00 | 1.47e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164940780 | 164955850 | ENSMUSG00000017737 | 0.5213 | + | Mmp9 | protein_coding | 1.19e-10 | 2.72e-07 | -7.95517 | 3.00e+00 | 9.51e+00 | 9.56e+00 | 1.49e-03 | 1.54e-01 | 1.60e-01 | 1.58e+00 | 0.00e+00 | 4.26e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21325887 | 21327020 | ENSMUSG00000074437 | 0.4321 | - | Defa29 | protein_coding | 1.27e-10 | 2.72e-07 | -7.89785 | 0.00e+00 | 1.02e+01 | 7.82e+00 | 0.00e+00 | 8.82e-01 | 1.65e-01 | 1.00e+00 | 1.00e+00 | 7.33e-04 | 7.33e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 172893961 | 172895041 | ENSMUSG00000026542 | 0.4265 | - | Apcs | protein_coding | 1.33e-10 | 2.72e-07 | 7.65105 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 8.02e+00 | 7.15e+00 | 1.86e-01 | 1.01e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 39007019 | 39042693 | ENSMUSG00000025002 | 0.4127 | + | Cyp2c55 | protein_coding | 1.61e-10 | 2.95e-07 | 7.72792 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 7.96e+00 | 7.45e+00 | 1.42e-01 | 9.96e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 121838541 | 121889057 | ENSMUSG00000059908 | 0.3956 | + | Mug1 | protein_coding | 2.39e-10 | 3.99e-07 | 7.76238 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.57e-04 | 0.00e+00 | 7.25e+00 | 8.74e+00 | 2.36e-02 | 6.67e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 40037941 | 40073811 | ENSMUSG00000067225 | 0.3861 | - | Cyp2c54 | protein_coding | 2.96e-10 | 4.53e-07 | 7.72707 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 6.46e-04 | 0.00e+00 | 8.27e+00 | 8.00e+00 | 1.99e-01 | 1.65e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 113302965 | 113307933 | ENSMUSG00000076613 | 0.5017 | - | Ighg2b | IG_C_gene | 3.80e-10 | 5.18e-07 | -8.02422 | 0.00e+00 | 8.56e+00 | 8.65e+00 | 0.00e+00 | 9.50e-02 | 1.02e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 35647266 | 35649367 | ENSMUSG00000024353 | 0.5295 | - | Mzb1 | protein_coding | 3.95e-10 | 5.18e-07 | -7.72186 | 0.00e+00 | 1.15e+01 | 1.15e+01 | 0.00e+00 | 1.82e+00 | 1.85e+00 | 4.09e+00 | 0.00e+00 | 1.03e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 39269405 | 39330713 | ENSMUSG00000003053 | 0.3735 | + | Cyp2c29 | protein_coding | 4.24e-10 | 5.18e-07 | 8.79008 | 0.00e+00 | 2.81e+00 | 0.00e+00 | 0.00e+00 | 6.93e-04 | 0.00e+00 | 1.09e+01 | 9.47e+00 | 2.24e-01 | 8.20e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 20692953 | 20727562 | ENSMUSG00000024747 | 0.3855 | - | Aldh1a7 | protein_coding | 4.54e-10 | 5.21e-07 | 7.60511 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 5.68e-04 | 5.68e-04 | 9.11e+00 | 6.61e+00 | 3.12e-01 | 5.51e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 13796246 | 13837409 | ENSMUSG00000078798 | 0.3816 | - | Sult2a1 | protein_coding | 6.79e-10 | 7.33e-07 | 7.80413 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 8.76e+00 | 3.58e+00 | 3.19e-01 | 8.08e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21455445 | 21456560 | ENSMUSG00000079114 | 0.4265 | - | Gm7849 | protein_coding | 8.41e-10 | 8.58e-07 | -7.18439 | 0.00e+00 | 1.16e+01 | 9.33e+00 | 0.00e+00 | 2.28e+00 | 4.76e-01 | 3.17e+00 | 3.00e+00 | 5.94e-03 | 5.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 108343354 | 108414396 | ENSMUSG00000000049 | 0.4383 | + | Apoh | protein_coding | 9.21e-10 | 8.58e-07 | 7.80171 | 0.00e+00 | 1.58e+00 | 2.00e+00 | 0.00e+00 | 5.11e-04 | 7.67e-04 | 9.12e+00 | 9.31e+00 | 1.42e-01 | 1.62e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 141690340 | 141754693 | ENSMUSG00000025515 | 0.5191 | + | Muc2 | protein_coding | 9.35e-10 | 8.58e-07 | -7.87242 | 0.00e+00 | 9.08e+00 | 7.31e+00 | 0.00e+00 | 6.97e-02 | 2.03e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 145003817 | 145032776 | ENSMUSG00000028255 | 0.4281 | - | Clca1 | protein_coding | 1.07e-09 | 9.32e-07 | -7.88874 | 0.00e+00 | 9.00e+00 | 7.62e+00 | 0.00e+00 | 1.51e-01 | 5.79e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21095074 | 21096050 | ENSMUSG00000061958 | 0.4289 | - | Gm14851 | protein_coding | 1.92e-09 | 1.60e-06 | -6.89482 | 0.00e+00 | 1.06e+01 | 7.71e+00 | 0.00e+00 | 1.26e+00 | 1.66e-01 | 2.32e+00 | 2.32e+00 | 3.19e-03 | 3.19e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 43596049 | 43601540 | ENSMUSG00000020405 | 0.4468 | - | Fabp6 | protein_coding | 2.31e-09 | 1.77e-06 | -7.30166 | 0.00e+00 | 1.22e+01 | 9.34e+00 | 0.00e+00 | 3.64e+00 | 4.93e-01 | 4.46e+00 | 0.00e+00 | 1.60e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21593375 | 21594508 | ENSMUSG00000079113 | 0.4250 | - | Gm7861 | protein_coding | 2.34e-09 | 1.77e-06 | -7.21794 | 3.00e+00 | 1.24e+01 | 9.97e+00 | 5.13e-03 | 4.00e+00 | 7.37e-01 | 3.58e+00 | 4.09e+00 | 8.06e-03 | 1.17e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 4434306 | 4457877 | ENSMUSG00000021210 | 0.3728 | + | Akr1c6 | protein_coding | 2.42e-09 | 1.77e-06 | 5.81553 | 3.00e+00 | 1.00e+00 | 0.00e+00 | 1.05e-03 | 1.50e-04 | 0.00e+00 | 8.29e+00 | 6.64e+00 | 4.68e-02 | 1.49e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 134600022 | 134615025 | ENSMUSG00000040751 | 0.5223 | - | Lat2 | protein_coding | 2.66e-09 | 1.88e-06 | -7.64065 | 6.49e+00 | 9.29e+00 | 7.50e+00 | 1.28e-02 | 8.97e-02 | 2.58e-02 | 1.00e+00 | 0.00e+00 | 1.43e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 137981520 | 137990233 | ENSMUSG00000037053 | 0.4519 | + | Azgp1 | protein_coding | 2.85e-09 | 1.94e-06 | 5.08621 | 3.91e+00 | 0.00e+00 | 0.00e+00 | 2.55e-03 | 0.00e+00 | 0.00e+00 | 7.92e+00 | 7.15e+00 | 4.40e-02 | 2.57e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 173274382 | 173277777 | ENSMUSG00000079180 | 0.4031 | - | Mptx2 | protein_coding | 3.11e-09 | 2.04e-06 | -7.31892 | 0.00e+00 | 9.60e+00 | 7.50e+00 | 0.00e+00 | 5.82e-01 | 1.35e-01 | 1.58e+00 | 0.00e+00 | 1.50e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 134082448 | 134095082 | ENSMUSG00000000682 | 0.4953 | - | Cd52 | protein_coding | 3.34e-09 | 2.12e-06 | -6.99216 | 7.48e+00 | 1.13e+01 | 1.10e+01 | 4.51e-02 | 6.43e-01 | 5.20e-01 | 4.09e+00 | 3.00e+00 | 4.05e-03 | 1.77e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 131032053 | 131121630 | ENSMUSG00000047517 | 0.4550 | + | Dmbt1 | protein_coding | 3.80e-09 | 2.32e-06 | -7.71195 | 0.00e+00 | 8.52e+00 | 8.03e+00 | 0.00e+00 | 8.90e-02 | 6.36e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 33794037 | 33819934 | ENSMUSG00000022824 | 0.4478 | + | Muc13 | protein_coding | 4.96e-09 | 2.92e-06 | -7.45943 | 0.00e+00 | 8.23e+00 | 7.82e+00 | 0.00e+00 | 1.30e-01 | 9.73e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 51213708 | 51240080 | ENSMUSG00000032053 | 0.4270 | + | Pou2af1 | protein_coding | 5.10e-09 | 2.92e-06 | -7.70736 | 4.46e+00 | 7.81e+00 | 8.57e+00 | 7.11e-03 | 7.59e-02 | 1.28e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 40089688 | 40113950 | ENSMUSG00000054827 | 0.3890 | + | Cyp2c50 | protein_coding | 5.41e-09 | 2.94e-06 | 5.62785 | 4.46e+00 | 2.58e+00 | 0.00e+00 | 7.40e-03 | 1.76e-03 | 0.00e+00 | 9.51e+00 | 7.84e+00 | 2.56e-01 | 8.03e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 43784775 | 43803132 | ENSMUSG00000015396 | 0.4578 | + | Cd83 | protein_coding | 5.45e-09 | 2.94e-06 | -7.52356 | 6.13e+00 | 8.56e+00 | 8.57e+00 | 2.56e-02 | 1.40e-01 | 1.40e-01 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 3.71e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 103646630 | 103657212 | ENSMUSG00000060807 | 0.4496 | - | Serpina6 | protein_coding | 5.65e-09 | 2.96e-06 | 5.36923 | 3.91e+00 | 1.00e+00 | 0.00e+00 | 5.15e-03 | 3.68e-04 | 0.00e+00 | 8.12e+00 | 7.76e+00 | 1.02e-01 | 7.94e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34305877 | 34316199 | ENSMUSG00000060586 | 0.4846 | + | H2-Eb1 | protein_coding | 7.63e-09 | 3.89e-06 | -6.80457 | 3.00e+00 | 1.06e+01 | 1.20e+01 | 4.48e-03 | 9.87e-01 | 2.65e+00 | 4.86e+00 | 2.32e+00 | 1.79e-02 | 2.56e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 39992424 | 40012243 | ENSMUSG00000042248 | 0.3629 | + | Cyp2c37 | protein_coding | 8.88e-09 | 4.41e-06 | 7.21723 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 1.26e-03 | 0.00e+00 | 8.47e+00 | 7.15e+00 | 2.22e-01 | 8.88e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 117287797 | 117292868 | ENSMUSG00000069515 | 0.4608 | - | Lyz1 | protein_coding | 1.01e-08 | 4.88e-06 | -6.51307 | 0.00e+00 | 1.04e+01 | 9.09e+00 | 0.00e+00 | 6.73e-01 | 2.66e-01 | 2.58e+00 | 3.00e+00 | 2.45e-03 | 3.43e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 30886476 | 30901981 | ENSMUSG00000021922 | 0.5278 | + | Itih4 | protein_coding | 1.08e-08 | 5.06e-06 | 6.89655 | 0.00e+00 | 2.32e+00 | 0.00e+00 | 0.00e+00 | 2.62e-03 | 0.00e+00 | 8.58e+00 | 7.43e+00 | 2.50e-01 | 1.12e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21191614 | 21192549 | ENSMUSG00000074442 | 0.4295 | + | Defa31 | protein_coding | 1.24e-08 | 5.69e-06 | -6.34271 | 0.00e+00 | 1.14e+01 | 9.16e+00 | 0.00e+00 | 2.01e+00 | 4.25e-01 | 4.39e+00 | 2.58e+00 | 1.48e-02 | 3.71e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21665797 | 21666732 | ENSMUSG00000063206 | 0.4071 | + | Defa34 | protein_coding | 1.36e-08 | 6.01e-06 | -6.34922 | 0.00e+00 | 1.12e+01 | 9.09e+00 | 0.00e+00 | 1.78e+00 | 4.04e-01 | 3.81e+00 | 3.32e+00 | 9.67e-03 | 6.69e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 57676937 | 57683703 | ENSMUSG00000032310 | 0.4883 | - | Cyp1a2 | protein_coding | 1.38e-08 | 6.01e-06 | 6.17742 | 3.00e+00 | 2.81e+00 | 0.00e+00 | 2.50e-03 | 2.15e-03 | 0.00e+00 | 8.54e+00 | 8.64e+00 | 1.33e-01 | 1.43e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 41105381 | 41124412 | ENSMUSG00000037798 | 0.4489 | + | Mat1a | protein_coding | 1.57e-08 | 6.72e-06 | 4.83581 | 4.46e+00 | 1.58e+00 | 0.00e+00 | 6.86e-03 | 6.54e-04 | 0.00e+00 | 8.46e+00 | 7.15e+00 | 1.15e-01 | 4.61e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21297439 | 21298375 | ENSMUSG00000074439 | 0.4130 | + | Defa5 | protein_coding | 1.79e-08 | 7.46e-06 | -6.30378 | 0.00e+00 | 1.04e+01 | 8.40e+00 | 0.00e+00 | 9.80e-01 | 2.50e-01 | 2.81e+00 | 2.81e+00 | 4.46e-03 | 4.46e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 63891264 | 63912297 | ENSMUSG00000055748 | 0.4246 | - | Gsdmc4 | protein_coding | 2.08e-08 | 8.45e-06 | -7.29360 | 0.00e+00 | 8.76e+00 | 8.08e+00 | 0.00e+00 | 2.42e-01 | 1.50e-01 | 1.00e+00 | 0.00e+00 | 5.58e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 70054085 | 70057894 | ENSMUSG00000020884 | 0.5444 | + | Asgr1 | protein_coding | 2.12e-08 | 8.45e-06 | 6.32152 | 4.81e+00 | 3.91e+00 | 0.00e+00 | 9.80e-03 | 5.08e-03 | 0.00e+00 | 1.02e+01 | 1.02e+01 | 4.28e-01 | 4.23e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21427411 | 21428391 | ENSMUSG00000094662 | 0.4139 | + | Defa36 | protein_coding | 2.19e-08 | 8.57e-06 | -6.13087 | 0.00e+00 | 1.11e+01 | 9.25e+00 | 0.00e+00 | 1.58e+00 | 4.52e-01 | 3.46e+00 | 3.91e+00 | 7.43e-03 | 1.04e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 22985854 | 23029101 | ENSMUSG00000060459 | 0.4230 | - | Kng2 | protein_coding | 2.36e-08 | 9.02e-06 | 4.60231 | 4.81e+00 | 1.00e+00 | 0.00e+00 | 2.84e-03 | 1.05e-04 | 0.00e+00 | 7.66e+00 | 8.23e+00 | 2.11e-02 | 3.14e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 69964779 | 69967885 | ENSMUSG00000018569 | 0.5848 | + | Cldn7 | protein_coding | 2.89e-08 | 1.08e-05 | -7.26366 | 0.00e+00 | 8.27e+00 | 7.25e+00 | 0.00e+00 | 1.12e-01 | 5.52e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 78466269 | 78468872 | ENSMUSG00000030017 | 0.4213 | - | Reg3g | protein_coding | 3.48e-08 | 1.28e-05 | -6.62644 | 0.00e+00 | 8.64e+00 | 8.41e+00 | 0.00e+00 | 2.71e-01 | 2.32e-01 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 2.04e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 63143275 | 63154799 | ENSMUSG00000028356 | 0.4980 | - | Ambp | protein_coding | 3.54e-08 | 1.28e-05 | 5.66408 | 5.13e+00 | 3.91e+00 | 0.00e+00 | 1.31e-02 | 5.38e-03 | 0.00e+00 | 1.05e+01 | 8.31e+00 | 5.40e-01 | 1.22e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21055047 | 21056016 | ENSMUSG00000074446 | 0.4340 | + | Defa23 | protein_coding | 4.18e-08 | 1.44e-05 | -5.95047 | 0.00e+00 | 1.08e+01 | 8.92e+00 | 0.00e+00 | 1.36e+00 | 3.58e-01 | 3.91e+00 | 3.32e+00 | 1.04e-02 | 6.68e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 7197782 | 7202546 | ENSMUSG00000020429 | 0.4886 | + | Igfbp1 | protein_coding | 4.24e-08 | 1.44e-05 | 6.88264 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 7.60e+00 | 5.39e+00 | 1.08e-01 | 2.30e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 128254096 | 128255896 | ENSMUSG00000051716 | 0.4842 | + | Apon | protein_coding | 4.24e-08 | 1.44e-05 | 6.73471 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 1.19e-03 | 0.00e+00 | 7.16e+00 | 7.73e+00 | 8.42e-02 | 1.25e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21378515 | 21379495 | ENSMUSG00000096295 | 0.4455 | + | Defa2 | protein_coding | 4.59e-08 | 1.53e-05 | -6.28046 | 3.00e+00 | 1.24e+01 | 1.05e+01 | 5.20e-03 | 4.15e+00 | 1.04e+00 | 5.36e+00 | 4.25e+00 | 2.97e-02 | 1.34e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 19198396 | 19200351 | ENSMUSG00000076937 | 0.4422 | - | Iglc2 | IG_C_gene | 5.03e-08 | 1.63e-05 | -6.16725 | 0.00e+00 | 8.57e+00 | 9.45e+00 | 0.00e+00 | 2.73e-01 | 5.02e-01 | 3.00e+00 | 1.00e+00 | 5.05e-03 | 7.21e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 78480553 | 78495066 | ENSMUSG00000068227 | 0.5306 | - | Il2rb | protein_coding | 5.07e-08 | 1.63e-05 | -7.29768 | 0.00e+00 | 7.79e+00 | 7.97e+00 | 0.00e+00 | 1.01e-01 | 1.14e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83587882 | 83593087 | ENSMUSG00000018927 | 0.4368 | - | Ccl6 | protein_coding | 5.49e-08 | 1.69e-05 | -6.85175 | 0.00e+00 | 8.30e+00 | 8.56e+00 | 0.00e+00 | 9.11e-02 | 1.09e-01 | 1.58e+00 | 0.00e+00 | 5.80e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 11313812 | 11320074 | ENSMUSG00000022496 | 0.4669 | + | Tnfrsf17 | protein_coding | 5.51e-08 | 1.69e-05 | -7.33985 | 0.00e+00 | 8.14e+00 | 7.67e+00 | 0.00e+00 | 2.05e-01 | 1.48e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 130913125 | 130936141 | ENSMUSG00000028581 | 0.5309 | + | Laptm5 | protein_coding | 5.62e-08 | 1.69e-05 | -6.20153 | 7.03e+00 | 1.15e+01 | 1.14e+01 | 1.25e-02 | 2.77e-01 | 2.52e-01 | 5.17e+00 | 3.91e+00 | 3.37e-03 | 1.35e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21162277 | 21163249 | ENSMUSG00000074443 | 0.4378 | + | Defa22 | protein_coding | 5.63e-08 | 1.69e-05 | -6.47620 | 3.00e+00 | 1.29e+01 | 1.06e+01 | 5.20e-03 | 5.79e+00 | 1.15e+00 | 5.43e+00 | 4.75e+00 | 3.12e-02 | 1.93e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 75242287 | 75283551 | ENSMUSG00000021999 | 0.4230 | + | Cpb2 | protein_coding | 5.74e-08 | 1.70e-05 | 6.73978 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.20e-04 | 0.00e+00 | 7.70e+00 | 6.27e+00 | 1.49e-01 | 5.48e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 144242296 | 144249242 | ENSMUSG00000026358 | 0.3610 | - | Rgs1 | protein_coding | 6.01e-08 | 1.73e-05 | -6.07631 | 4.46e+00 | 9.14e+00 | 9.70e+00 | 2.45e-03 | 6.57e-02 | 9.71e-02 | 3.58e+00 | 1.00e+00 | 1.29e-03 | 1.17e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21134642 | 21135598 | ENSMUSG00000074444 | 0.4316 | + | Defa30 | protein_coding | 6.02e-08 | 1.73e-05 | -6.02207 | 0.00e+00 | 1.19e+01 | 1.00e+01 | 0.00e+00 | 2.85e+00 | 7.67e-01 | 4.32e+00 | 4.91e+00 | 1.41e-02 | 2.15e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 94693556 | 94704413 | ENSMUSG00000068877 | 0.4995 | + | Selenbp2 | protein_coding | 7.13e-08 | 2.01e-05 | 6.45533 | 0.00e+00 | 3.00e+00 | 2.32e+00 | 0.00e+00 | 1.08e-03 | 6.20e-04 | 7.83e+00 | 9.21e+00 | 3.50e-02 | 9.16e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 105591613 | 105600137 | ENSMUSG00000030895 | 0.4687 | - | Hpx | protein_coding | 7.48e-08 | 2.08e-05 | 5.01743 | 6.49e+00 | 4.09e+00 | 0.00e+00 | 3.46e-02 | 6.22e-03 | 0.00e+00 | 1.10e+01 | 8.46e+00 | 7.69e-01 | 1.36e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 46268633 | 46271919 | ENSMUSG00000032079 | 0.5537 | + | Apoa5 | protein_coding | 8.42e-08 | 2.30e-05 | 4.01895 | 6.13e+00 | 2.58e+00 | 1.00e+00 | 2.23e-02 | 1.62e-03 | 3.24e-04 | 8.27e+00 | 9.06e+00 | 9.94e-02 | 1.73e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 93099015 | 93131283 | ENSMUSG00000057400 | 0.4154 | - | Ces1c | protein_coding | 8.52e-08 | 2.30e-05 | 5.64643 | 3.91e+00 | 3.58e+00 | 0.00e+00 | 3.58e-03 | 2.82e-03 | 0.00e+00 | 9.78e+00 | 5.83e+00 | 2.25e-01 | 1.43e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21025545 | 21026516 | ENSMUSG00000074447 | 0.4414 | + | Defa21 | protein_coding | 9.23e-08 | 2.44e-05 | -6.37750 | 3.00e+00 | 1.31e+01 | 1.03e+01 | 5.20e-03 | 6.45e+00 | 9.58e-01 | 5.67e+00 | 4.86e+00 | 3.72e-02 | 2.08e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21565386 | 21566349 | ENSMUSG00000065956 | 0.4118 | + | Defa37 | protein_coding | 9.31e-08 | 2.44e-05 | -5.83959 | 0.00e+00 | 1.17e+01 | 9.84e+00 | 0.00e+00 | 2.45e+00 | 6.81e-01 | 4.39e+00 | 4.81e+00 | 1.49e-02 | 2.01e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 145854426 | 145879964 | ENSMUSG00000056035 | 0.4138 | - | Cyp3a11 | protein_coding | 9.59e-08 | 2.47e-05 | 4.50995 | 7.59e+00 | 3.58e+00 | 0.00e+00 | 6.10e-02 | 3.50e-03 | 0.00e+00 | 1.13e+01 | 9.20e+00 | 8.08e-01 | 1.86e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21509258 | 21510237 | ENSMUSG00000095066 | 0.4459 | + | Defa20 | protein_coding | 9.69e-08 | 2.47e-05 | -6.31621 | 0.00e+00 | 1.29e+01 | 1.09e+01 | 0.00e+00 | 5.50e+00 | 1.43e+00 | 5.52e+00 | 5.00e+00 | 3.34e-02 | 2.30e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 12633308 | 12653911 | ENSMUSG00000063683 | 0.3957 | + | Glyat | protein_coding | 1.11e-07 | 2.80e-05 | 6.44708 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 4.12e-04 | 0.00e+00 | 7.77e+00 | 7.02e+00 | 2.99e-02 | 1.77e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21287409 | 21288377 | ENSMUSG00000074440 | 0.4427 | + | Defa3 | protein_coding | 1.26e-07 | 3.13e-05 | -6.08746 | 0.00e+00 | 9.70e+00 | 7.57e+00 | 0.00e+00 | 6.15e-01 | 1.40e-01 | 2.58e+00 | 2.00e+00 | 3.71e-03 | 2.23e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 22918382 | 22939766 | ENSMUSG00000022871 | 0.4443 | + | Fetub | protein_coding | 1.36e-07 | 3.27e-05 | 6.37613 | 0.00e+00 | 2.58e+00 | 0.00e+00 | 0.00e+00 | 3.62e-03 | 0.00e+00 | 8.27e+00 | 7.08e+00 | 2.22e-01 | 9.69e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for UI_vs_GIH.Download the whole result list for UI_vs_GIH.DEG table for the contrast UI_vs_GILThe following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast UI_vs_GIL. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | log2_normalized_fold_change_UI_vs_GIL | log2_normalized_counts_GK3R96-UI1 | log2_normalized_counts_GK3R97-UI2 | log2_normalized_counts_GK3R98-UI3 | rpgm_normalized_counts_GK3R96-UI1 | rpgm_normalized_counts_GK3R97-UI2 | rpgm_normalized_counts_GK3R98-UI3 | log2_normalized_counts_GK3R90-GIL1 | log2_normalized_counts_GK3R91-GIL2 | log2_normalized_counts_GK3R92-GIL3 | rpgm_normalized_counts_GK3R90-GIL1 | rpgm_normalized_counts_GK3R91-GIL2 | rpgm_normalized_counts_GK3R92-GIL3 | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr7 | 127050156 | 127087328 | ENSMUSG00000049350 | 0.4615 | - | Zg16 | protein_coding | 3.90e-17 | 4.25e-13 | -9.30058 | 0.00e+00 | 1.12e+01 | 9.58e+00 | 0.00e+00 | 8.44e-01 | 2.72e-01 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 7.08e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 171518122 | 171535294 | ENSMUSG00000038209 | 0.4250 | - | Itln1 | protein_coding | 5.87e-17 | 4.25e-13 | -9.60389 | 0.00e+00 | 1.22e+01 | 9.41e+00 | 0.00e+00 | 1.82e+00 | 2.59e-01 | 0.00e+00 | 2.32e+00 | 0.00e+00 | 0.00e+00 | 1.52e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 78370657 | 78373466 | ENSMUSG00000071356 | 0.4171 | + | Reg3b | protein_coding | 8.54e-17 | 4.25e-13 | -9.44708 | 0.00e+00 | 1.06e+01 | 1.02e+01 | 0.00e+00 | 5.80e-01 | 4.47e-01 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.68e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21055047 | 21056016 | ENSMUSG00000074446 | 0.4340 | + | Defa23 | protein_coding | 9.25e-17 | 4.25e-13 | -9.17929 | 0.00e+00 | 1.08e+01 | 8.92e+00 | 0.00e+00 | 1.36e+00 | 3.58e-01 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.42e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164940780 | 164955850 | ENSMUSG00000017737 | 0.5213 | + | Mmp9 | protein_coding | 4.08e-16 | 1.50e-12 | -8.95517 | 3.00e+00 | 9.51e+00 | 9.56e+00 | 1.49e-03 | 1.54e-01 | 1.60e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21191614 | 21192549 | ENSMUSG00000074442 | 0.4295 | + | Defa31 | protein_coding | 4.93e-16 | 1.51e-12 | -8.51263 | 0.00e+00 | 1.14e+01 | 9.16e+00 | 0.00e+00 | 2.01e+00 | 4.25e-01 | 2.00e+00 | 1.58e+00 | 1.00e+00 | 2.23e-03 | 1.48e-03 | 7.42e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 36111965 | 36119844 | ENSMUSG00000024803 | 0.4397 | - | Ankrd1 | protein_coding | 1.28e-15 | 3.37e-12 | -9.90489 | 1.11e+01 | 7.95e+00 | 8.85e+00 | 1.09e+00 | 1.23e-01 | 2.32e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 43596049 | 43601540 | ENSMUSG00000020405 | 0.4468 | - | Fabp6 | protein_coding | 1.57e-15 | 3.59e-12 | -8.95075 | 0.00e+00 | 1.22e+01 | 9.34e+00 | 0.00e+00 | 3.64e+00 | 4.93e-01 | 2.58e+00 | 2.00e+00 | 0.00e+00 | 3.80e-03 | 2.28e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 173274382 | 173277777 | ENSMUSG00000079180 | 0.4031 | - | Mptx2 | protein_coding | 5.76e-15 | 1.17e-11 | -8.31892 | 0.00e+00 | 9.60e+00 | 7.50e+00 | 0.00e+00 | 5.82e-01 | 1.35e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 144242296 | 144249242 | ENSMUSG00000026358 | 0.3610 | - | Rgs1 | protein_coding | 2.30e-14 | 4.22e-11 | -8.14670 | 4.46e+00 | 9.14e+00 | 9.70e+00 | 2.45e-03 | 6.57e-02 | 9.71e-02 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 2.34e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21095074 | 21096050 | ENSMUSG00000061958 | 0.4289 | - | Gm14851 | protein_coding | 3.05e-14 | 5.09e-11 | -7.99435 | 0.00e+00 | 1.06e+01 | 7.71e+00 | 0.00e+00 | 1.26e+00 | 1.66e-01 | 0.00e+00 | 1.58e+00 | 1.58e+00 | 0.00e+00 | 1.60e-03 | 1.60e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 45079183 | 45108534 | ENSMUSG00000048534 | 0.4642 | + | Jaml | protein_coding | 5.73e-14 | 8.76e-11 | -8.06070 | 0.00e+00 | 8.51e+00 | 8.76e+00 | 0.00e+00 | 7.51e-02 | 8.96e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21162277 | 21163249 | ENSMUSG00000074443 | 0.4378 | + | Defa22 | protein_coding | 7.14e-14 | 1.01e-10 | -8.66688 | 3.00e+00 | 1.29e+01 | 1.06e+01 | 5.20e-03 | 5.79e+00 | 1.15e+00 | 1.58e+00 | 3.81e+00 | 2.58e+00 | 1.49e-03 | 9.66e-03 | 3.71e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21565386 | 21566349 | ENSMUSG00000065956 | 0.4118 | + | Defa37 | protein_coding | 9.61e-14 | 1.26e-10 | -7.95180 | 0.00e+00 | 1.17e+01 | 9.84e+00 | 0.00e+00 | 2.45e+00 | 6.81e-01 | 0.00e+00 | 3.70e+00 | 1.58e+00 | 0.00e+00 | 8.92e-03 | 1.49e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 35647266 | 35649367 | ENSMUSG00000024353 | 0.5295 | - | Mzb1 | protein_coding | 1.32e-13 | 1.53e-10 | -7.95318 | 0.00e+00 | 1.15e+01 | 1.15e+01 | 0.00e+00 | 1.82e+00 | 1.85e+00 | 3.00e+00 | 3.17e+00 | 2.58e+00 | 4.50e-03 | 5.14e-03 | 3.21e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21325887 | 21327020 | ENSMUSG00000074437 | 0.4321 | - | Defa29 | protein_coding | 1.34e-13 | 1.53e-10 | -7.89785 | 0.00e+00 | 1.02e+01 | 7.82e+00 | 0.00e+00 | 8.82e-01 | 1.65e-01 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 2.20e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 141690340 | 141754693 | ENSMUSG00000025515 | 0.5191 | + | Muc2 | protein_coding | 1.99e-13 | 2.05e-10 | -7.87242 | 0.00e+00 | 9.08e+00 | 7.31e+00 | 0.00e+00 | 6.97e-02 | 2.03e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21391811 | 21392791 | ENSMUSG00000094362 | 0.4465 | + | Defa33 | protein_coding | 2.01e-13 | 2.05e-10 | -7.47573 | 0.00e+00 | 1.17e+01 | 9.76e+00 | 0.00e+00 | 2.40e+00 | 6.46e-01 | 3.17e+00 | 3.17e+00 | 2.32e+00 | 5.95e-03 | 5.95e-03 | 2.97e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21529032 | 21530012 | ENSMUSG00000094818 | 0.4455 | + | Defa32 | protein_coding | 2.36e-13 | 2.28e-10 | -7.64428 | 0.00e+00 | 1.24e+01 | 1.04e+01 | 0.00e+00 | 4.02e+00 | 1.03e+00 | 4.00e+00 | 3.17e+00 | 3.17e+00 | 1.11e-02 | 5.94e-03 | 5.94e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83662584 | 83664683 | ENSMUSG00000018930 | 0.4457 | + | Ccl4 | protein_coding | 2.60e-13 | 2.39e-10 | -7.23309 | 3.00e+00 | 9.42e+00 | 9.37e+00 | 4.50e-03 | 4.40e-01 | 4.25e-01 | 2.58e+00 | 1.00e+00 | 0.00e+00 | 3.22e-03 | 6.44e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21665797 | 21666732 | ENSMUSG00000063206 | 0.4071 | + | Defa34 | protein_coding | 3.82e-13 | 3.34e-10 | -7.51914 | 0.00e+00 | 1.12e+01 | 9.09e+00 | 0.00e+00 | 1.78e+00 | 4.04e-01 | 0.00e+00 | 3.17e+00 | 2.58e+00 | 0.00e+00 | 5.95e-03 | 3.72e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21427411 | 21428391 | ENSMUSG00000094662 | 0.4139 | + | Defa36 | protein_coding | 4.83e-13 | 4.03e-10 | -7.50938 | 0.00e+00 | 1.11e+01 | 9.25e+00 | 0.00e+00 | 1.58e+00 | 4.52e-01 | 0.00e+00 | 3.00e+00 | 2.58e+00 | 0.00e+00 | 5.20e-03 | 3.72e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21455445 | 21456560 | ENSMUSG00000079114 | 0.4265 | - | Gm7849 | protein_coding | 5.37e-13 | 4.29e-10 | -7.27185 | 0.00e+00 | 1.16e+01 | 9.33e+00 | 0.00e+00 | 2.28e+00 | 4.76e-01 | 2.81e+00 | 3.17e+00 | 3.00e+00 | 4.46e-03 | 5.94e-03 | 5.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21134642 | 21135598 | ENSMUSG00000074444 | 0.4316 | + | Defa30 | protein_coding | 5.94e-13 | 4.55e-10 | -7.55045 | 0.00e+00 | 1.19e+01 | 1.00e+01 | 0.00e+00 | 2.85e+00 | 7.67e-01 | 1.00e+00 | 2.81e+00 | 4.09e+00 | 7.42e-04 | 4.45e-03 | 1.19e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21655780 | 21656735 | ENSMUSG00000060208 | 0.4404 | + | Defa17 | protein_coding | 7.28e-13 | 5.34e-10 | -7.79172 | 3.91e+00 | 1.24e+01 | 1.01e+01 | 1.04e-02 | 3.96e+00 | 8.02e-01 | 0.00e+00 | 4.52e+00 | 2.32e+00 | 0.00e+00 | 1.63e-02 | 2.97e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21509258 | 21510237 | ENSMUSG00000095066 | 0.4459 | + | Defa20 | protein_coding | 9.11e-13 | 6.43e-10 | -7.79426 | 0.00e+00 | 1.29e+01 | 1.09e+01 | 0.00e+00 | 5.50e+00 | 1.43e+00 | 4.00e+00 | 4.00e+00 | 3.32e+00 | 1.11e-02 | 1.11e-02 | 6.69e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21297439 | 21298375 | ENSMUSG00000074439 | 0.4130 | + | Defa5 | protein_coding | 9.79e-13 | 6.66e-10 | -7.23667 | 0.00e+00 | 1.04e+01 | 8.40e+00 | 0.00e+00 | 9.80e-01 | 2.50e-01 | 1.00e+00 | 2.00e+00 | 2.32e+00 | 7.43e-04 | 2.23e-03 | 2.97e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21593375 | 21594508 | ENSMUSG00000079113 | 0.4250 | - | Gm7861 | protein_coding | 1.34e-12 | 8.60e-10 | -7.37549 | 3.00e+00 | 1.24e+01 | 9.97e+00 | 5.13e-03 | 4.00e+00 | 7.37e-01 | 3.46e+00 | 3.81e+00 | 3.81e+00 | 7.33e-03 | 9.53e-03 | 9.53e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 43784775 | 43803132 | ENSMUSG00000015396 | 0.4578 | + | Cd83 | protein_coding | 1.43e-12 | 8.60e-10 | -7.69349 | 6.13e+00 | 8.56e+00 | 8.57e+00 | 2.56e-02 | 1.40e-01 | 1.40e-01 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.71e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 131032053 | 131121630 | ENSMUSG00000047517 | 0.4550 | + | Dmbt1 | protein_coding | 1.44e-12 | 8.60e-10 | -7.71195 | 0.00e+00 | 8.52e+00 | 8.03e+00 | 0.00e+00 | 8.90e-02 | 6.36e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 42772860 | 42773993 | ENSMUSG00000094686 | 0.5670 | - | Ccl21a | protein_coding | 1.46e-12 | 8.60e-10 | -7.09099 | 0.00e+00 | 6.86e+00 | 8.19e+00 | 0.00e+00 | 6.99e-02 | 1.77e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 25897620 | 25926624 | ENSMUSG00000030483 | 0.4536 | + | Cyp2b10 | protein_coding | 1.50e-12 | 8.60e-10 | 8.76929 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 9.28e+00 | 8.34e+00 | 8.51e+00 | 2.15e-01 | 1.12e-01 | 1.26e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 19198396 | 19200351 | ENSMUSG00000076937 | 0.4422 | - | Iglc2 | IG_C_gene | 1.69e-12 | 9.38e-10 | -7.48918 | 0.00e+00 | 8.57e+00 | 9.45e+00 | 0.00e+00 | 2.73e-01 | 5.02e-01 | 0.00e+00 | 1.00e+00 | 1.58e+00 | 0.00e+00 | 7.21e-04 | 1.44e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21065038 | 21065996 | ENSMUSG00000061845 | 0.4150 | + | Defa35 | protein_coding | 1.74e-12 | 9.41e-10 | -7.89077 | 0.00e+00 | 9.09e+00 | 7.38e+00 | 0.00e+00 | 4.06e-01 | 1.23e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21287409 | 21288377 | ENSMUSG00000074440 | 0.4427 | + | Defa3 | protein_coding | 2.37e-12 | 1.24e-09 | -7.40939 | 0.00e+00 | 9.70e+00 | 7.57e+00 | 0.00e+00 | 6.15e-01 | 1.40e-01 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 2.23e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21378515 | 21379495 | ENSMUSG00000096295 | 0.4455 | + | Defa2 | protein_coding | 2.53e-12 | 1.29e-09 | -7.48691 | 3.00e+00 | 1.24e+01 | 1.05e+01 | 5.20e-03 | 4.15e+00 | 1.04e+00 | 2.00e+00 | 4.32e+00 | 3.91e+00 | 2.23e-03 | 1.41e-02 | 1.04e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21734494 | 21735471 | ENSMUSG00000064213 | 0.4325 | + | Defa24 | protein_coding | 3.37e-12 | 1.67e-09 | -7.67910 | 3.00e+00 | 1.32e+01 | 1.11e+01 | 5.20e-03 | 6.88e+00 | 1.64e+00 | 4.81e+00 | 4.32e+00 | 3.00e+00 | 2.01e-02 | 1.41e-02 | 5.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21025545 | 21026516 | ENSMUSG00000074447 | 0.4414 | + | Defa21 | protein_coding | 4.82e-12 | 2.33e-09 | -7.61197 | 3.00e+00 | 1.31e+01 | 1.03e+01 | 5.20e-03 | 6.45e+00 | 9.58e-01 | 3.46e+00 | 4.46e+00 | 4.17e+00 | 7.43e-03 | 1.56e-02 | 1.26e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 127336159 | 127338376 | ENSMUSG00000027368 | 0.5762 | + | Dusp2 | protein_coding | 1.03e-11 | 4.83e-09 | -7.26805 | 4.46e+00 | 1.21e+01 | 1.18e+01 | 6.81e-03 | 1.42e+00 | 1.17e+00 | 3.91e+00 | 4.64e+00 | 3.58e+00 | 4.54e-03 | 7.78e-03 | 3.57e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 127704386 | 127729932 | ENSMUSG00000027377 | 0.4819 | - | Mall | protein_coding | 1.21e-11 | 5.57e-09 | -7.35535 | 0.00e+00 | 8.69e+00 | 7.91e+00 | 0.00e+00 | 1.51e-01 | 8.80e-02 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.67e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 76792333 | 76795554 | ENSMUSG00000042808 | 0.4808 | - | Gpx2 | protein_coding | 2.01e-11 | 8.99e-09 | -7.25739 | 4.46e+00 | 8.77e+00 | 7.27e+00 | 1.34e-02 | 2.77e-01 | 9.75e-02 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 6.37e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 69964779 | 69967885 | ENSMUSG00000018569 | 0.5848 | + | Cldn7 | protein_coding | 2.35e-11 | 1.03e-08 | -7.26366 | 0.00e+00 | 8.27e+00 | 7.25e+00 | 0.00e+00 | 1.12e-01 | 5.52e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 113302965 | 113307933 | ENSMUSG00000076613 | 0.5017 | - | Ighg2b | IG_C_gene | 2.50e-11 | 1.07e-08 | -7.28725 | 0.00e+00 | 8.56e+00 | 8.65e+00 | 0.00e+00 | 9.50e-02 | 1.02e-01 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 5.05e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 117287797 | 117292868 | ENSMUSG00000069515 | 0.4608 | - | Lyz1 | protein_coding | 3.30e-11 | 1.38e-08 | -6.32042 | 0.00e+00 | 1.04e+01 | 9.09e+00 | 0.00e+00 | 6.73e-01 | 2.66e-01 | 2.81e+00 | 3.17e+00 | 3.00e+00 | 2.94e-03 | 3.93e-03 | 3.43e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 7926000 | 7934897 | ENSMUSG00000033450 | 0.4537 | + | Tagap | protein_coding | 4.32e-11 | 1.75e-08 | -6.51067 | 0.00e+00 | 8.96e+00 | 8.98e+00 | 0.00e+00 | 2.46e-01 | 2.49e-01 | 2.58e+00 | 1.58e+00 | 1.00e+00 | 2.48e-03 | 9.90e-04 | 4.95e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 70156197 | 70170834 | ENSMUSG00000000318 | 0.4728 | + | Clec10a | protein_coding | 4.45e-11 | 1.75e-08 | -7.35462 | 0.00e+00 | 7.92e+00 | 7.95e+00 | 0.00e+00 | 4.12e-02 | 4.19e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 172893961 | 172895041 | ENSMUSG00000026542 | 0.4265 | - | Apcs | protein_coding | 4.49e-11 | 1.75e-08 | 7.96963 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 8.39e+00 | 7.54e+00 | 7.85e+00 | 2.40e-01 | 1.33e-01 | 1.64e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 63891264 | 63912297 | ENSMUSG00000055748 | 0.4246 | - | Gsdmc4 | protein_coding | 5.74e-11 | 2.19e-08 | -7.14160 | 0.00e+00 | 8.76e+00 | 8.08e+00 | 0.00e+00 | 2.42e-01 | 1.50e-01 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 1.12e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 40037941 | 40073811 | ENSMUSG00000067225 | 0.3861 | - | Cyp2c54 | protein_coding | 6.74e-11 | 2.52e-08 | 8.25385 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 6.46e-04 | 0.00e+00 | 9.31e+00 | 7.37e+00 | 8.71e+00 | 4.10e-01 | 1.06e-01 | 2.71e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21702519 | 21703645 | ENSMUSG00000058618 | 0.4295 | - | AY761184 | protein_coding | 7.92e-11 | 2.91e-08 | -6.71149 | 0.00e+00 | 9.59e+00 | 8.11e+00 | 0.00e+00 | 5.66e-01 | 2.02e-01 | 0.00e+00 | 2.81e+00 | 1.00e+00 | 0.00e+00 | 4.41e-03 | 7.35e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 46240696 | 46243459 | ENSMUSG00000032080 | 0.5557 | + | Apoa4 | protein_coding | 8.14e-11 | 2.93e-08 | 6.21140 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 4.93e-03 | 0.00e+00 | 0.00e+00 | 7.03e+00 | 7.94e+00 | 8.51e+00 | 9.15e-02 | 1.72e-01 | 2.55e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 11375523 | 11392790 | ENSMUSG00000101389 | 0.3817 | + | Ms4a4a | protein_coding | 8.34e-11 | 2.94e-08 | -6.35357 | 3.00e+00 | 1.07e+01 | 9.79e+00 | 5.59e-03 | 1.31e+00 | 7.04e-01 | 2.00e+00 | 4.32e+00 | 2.81e+00 | 2.40e-03 | 1.52e-02 | 4.79e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 107963696 | 107969283 | ENSMUSG00000004038 | 0.4961 | - | Gstm3 | protein_coding | 8.64e-11 | 2.94e-08 | 8.35629 | 0.00e+00 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 5.67e-04 | 1.70e-03 | 9.91e+00 | 8.71e+00 | 9.83e+00 | 5.47e-01 | 2.37e-01 | 5.16e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 145003817 | 145032776 | ENSMUSG00000028255 | 0.4281 | - | Clca1 | protein_coding | 8.65e-11 | 2.94e-08 | -6.88874 | 0.00e+00 | 9.00e+00 | 7.62e+00 | 0.00e+00 | 1.51e-01 | 5.79e-02 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 8.86e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 135120652 | 135177990 | ENSMUSG00000070691 | 0.5375 | + | Runx3 | protein_coding | 1.03e-10 | 3.44e-08 | -7.25424 | 3.91e+00 | 7.88e+00 | 7.70e+00 | 2.84e-03 | 4.75e-02 | 4.20e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 39269405 | 39330713 | ENSMUSG00000003053 | 0.3735 | + | Cyp2c29 | protein_coding | 1.34e-10 | 4.39e-08 | 9.27509 | 0.00e+00 | 2.81e+00 | 0.00e+00 | 0.00e+00 | 6.93e-04 | 0.00e+00 | 1.16e+01 | 9.25e+00 | 1.09e+01 | 3.50e-01 | 7.00e-02 | 2.24e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 20692953 | 20727562 | ENSMUSG00000024747 | 0.3855 | - | Aldh1a7 | protein_coding | 1.39e-10 | 4.47e-08 | 7.80219 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 5.68e-04 | 5.68e-04 | 8.20e+00 | 7.54e+00 | 9.31e+00 | 1.66e-01 | 1.05e-01 | 3.60e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 39007019 | 39042693 | ENSMUSG00000025002 | 0.4127 | + | Cyp2c55 | protein_coding | 2.49e-10 | 7.89e-08 | 7.71425 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 8.38e+00 | 6.63e+00 | 7.64e+00 | 1.89e-01 | 5.61e-02 | 1.13e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 108343354 | 108414396 | ENSMUSG00000000049 | 0.4383 | + | Apoh | protein_coding | 2.79e-10 | 8.70e-08 | 8.25444 | 0.00e+00 | 1.58e+00 | 2.00e+00 | 0.00e+00 | 5.11e-04 | 7.67e-04 | 1.03e+01 | 8.43e+00 | 9.76e+00 | 3.14e-01 | 8.79e-02 | 2.22e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 137981520 | 137990233 | ENSMUSG00000037053 | 0.4519 | + | Azgp1 | protein_coding | 3.16e-10 | 9.67e-08 | 5.96375 | 3.91e+00 | 0.00e+00 | 0.00e+00 | 2.55e-03 | 0.00e+00 | 0.00e+00 | 9.48e+00 | 5.86e+00 | 8.18e+00 | 1.30e-01 | 1.04e-02 | 5.26e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 101172997 | 101175443 | ENSMUSG00000044052 | 0.5595 | - | Ccr10 | protein_coding | 3.28e-10 | 9.88e-08 | -7.15987 | 4.46e+00 | 7.77e+00 | 7.55e+00 | 1.12e-02 | 1.17e-01 | 1.00e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 43728069 | 43737237 | ENSMUSG00000024503 | 0.3967 | - | Spink1 | protein_coding | 4.06e-10 | 1.20e-07 | -6.35755 | 3.00e+00 | 8.20e+00 | 7.57e+00 | 5.21e-03 | 2.18e-01 | 1.41e-01 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 2.23e-03 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 121838541 | 121889057 | ENSMUSG00000059908 | 0.3956 | + | Mug1 | protein_coding | 4.52e-10 | 1.32e-07 | 7.87498 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.57e-04 | 0.00e+00 | 9.18e+00 | 4.91e+00 | 8.37e+00 | 9.05e-02 | 4.54e-03 | 5.15e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 66458604 | 66465550 | ENSMUSG00000024521 | 0.4324 | + | Pmaip1 | protein_coding | 5.76e-10 | 1.65e-07 | -7.09276 | 5.13e+00 | 8.41e+00 | 7.42e+00 | 9.92e-03 | 9.89e-02 | 4.96e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 2.92e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 104146382 | 104153870 | ENSMUSG00000066361 | 0.4806 | - | Serpina3c | protein_coding | 5.89e-10 | 1.66e-07 | 7.83920 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 8.80e+00 | 4.25e+00 | 7.79e+00 | 2.12e-01 | 8.56e-03 | 1.05e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 63824346 | 63845177 | ENSMUSG00000056293 | 0.4269 | - | Gsdmc2 | protein_coding | 6.32e-10 | 1.76e-07 | -7.28848 | 0.00e+00 | 8.04e+00 | 7.68e+00 | 0.00e+00 | 1.47e-01 | 1.14e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 113818536 | 113832644 | ENSMUSG00000048163 | 0.5032 | - | Selplg | protein_coding | 6.54e-10 | 1.79e-07 | -6.91289 | 3.91e+00 | 7.18e+00 | 8.33e+00 | 3.33e-03 | 3.42e-02 | 7.62e-02 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 2.38e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34263209 | 34269418 | ENSMUSG00000073421 | 0.5225 | + | H2-Ab1 | protein_coding | 7.44e-10 | 2.01e-07 | -5.86079 | 0.00e+00 | 1.05e+01 | 1.11e+01 | 0.00e+00 | 5.21e-01 | 7.58e-01 | 3.17e+00 | 3.70e+00 | 5.32e+00 | 2.84e-03 | 4.26e-03 | 1.39e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 4434306 | 4457877 | ENSMUSG00000021210 | 0.3728 | + | Akr1c6 | protein_coding | 1.05e-09 | 2.78e-07 | 6.14048 | 3.00e+00 | 1.00e+00 | 0.00e+00 | 1.05e-03 | 1.50e-04 | 0.00e+00 | 8.68e+00 | 6.73e+00 | 8.03e+00 | 6.13e-02 | 1.58e-02 | 3.90e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 43446462 | 43454628 | ENSMUSG00000028459 | 0.5155 | - | Cd72 | protein_coding | 1.22e-09 | 3.17e-07 | -6.68416 | 0.00e+00 | 8.00e+00 | 8.49e+00 | 0.00e+00 | 3.36e-02 | 4.72e-02 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 3.95e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 87635979 | 87651106 | ENSMUSG00000045394 | 0.4636 | + | Epcam | protein_coding | 1.23e-09 | 3.17e-07 | -6.14364 | 3.00e+00 | 8.70e+00 | 8.15e+00 | 3.71e-03 | 2.19e-01 | 1.50e-01 | 2.00e+00 | 1.00e+00 | 2.00e+00 | 1.59e-03 | 5.29e-04 | 1.59e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 113325240 | 113330523 | ENSMUSG00000076614 | 0.5068 | - | Ighg1 | IG_C_gene | 1.47e-09 | 3.76e-07 | -6.94642 | 0.00e+00 | 7.25e+00 | 7.76e+00 | 0.00e+00 | 3.86e-02 | 5.53e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 105815540 | 105817357 | ENSMUSG00000104835 | 0.4444 | + | Gm5547 | lincRNA | 1.51e-09 | 3.79e-07 | -6.98109 | 0.00e+00 | 7.73e+00 | 7.37e+00 | 0.00e+00 | 1.68e-01 | 1.30e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 101264378 | 101268255 | ENSMUSG00000031304 | 0.4814 | - | Il2rg | protein_coding | 1.66e-09 | 4.13e-07 | -6.25030 | 0.00e+00 | 8.33e+00 | 8.16e+00 | 0.00e+00 | 5.89e-02 | 5.23e-02 | 0.00e+00 | 0.00e+00 | 2.58e+00 | 0.00e+00 | 0.00e+00 | 9.17e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34305877 | 34316199 | ENSMUSG00000060586 | 0.4846 | + | H2-Eb1 | protein_coding | 1.72e-09 | 4.21e-07 | -5.79050 | 3.00e+00 | 1.06e+01 | 1.20e+01 | 4.48e-03 | 9.87e-01 | 2.65e+00 | 4.70e+00 | 3.81e+00 | 5.98e+00 | 1.60e-02 | 8.31e-03 | 3.96e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 60924976 | 60989378 | ENSMUSG00000054641 | 0.3753 | + | Mmrn1 | protein_coding | 1.85e-09 | 4.46e-07 | -6.30378 | 0.00e+00 | 6.00e+00 | 7.43e+00 | 0.00e+00 | 1.93e-02 | 5.24e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 78466269 | 78468872 | ENSMUSG00000030017 | 0.4213 | - | Reg3g | protein_coding | 2.13e-09 | 5.04e-07 | -6.21140 | 0.00e+00 | 8.64e+00 | 8.41e+00 | 0.00e+00 | 2.71e-01 | 2.32e-01 | 0.00e+00 | 1.58e+00 | 2.58e+00 | 0.00e+00 | 1.36e-03 | 3.41e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 57676937 | 57683703 | ENSMUSG00000032310 | 0.4883 | - | Cyp1a2 | protein_coding | 2.14e-09 | 5.04e-07 | 6.75154 | 3.00e+00 | 2.81e+00 | 0.00e+00 | 2.50e-03 | 2.15e-03 | 0.00e+00 | 9.64e+00 | 8.48e+00 | 9.15e+00 | 2.85e-01 | 1.27e-01 | 2.03e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 13796246 | 13837409 | ENSMUSG00000078798 | 0.3816 | - | Sult2a1 | protein_coding | 2.42e-09 | 5.63e-07 | 6.96963 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 4.09e+00 | 8.20e+00 | 6.02e+00 | 1.18e-02 | 2.15e-01 | 4.70e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 128588199 | 128592293 | ENSMUSG00000045382 | 0.4864 | - | Cxcr4 | protein_coding | 2.60e-09 | 5.98e-07 | -5.93074 | 0.00e+00 | 8.10e+00 | 8.09e+00 | 0.00e+00 | 8.70e-02 | 8.64e-02 | 2.81e+00 | 0.00e+00 | 0.00e+00 | 1.91e-03 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 93014205 | 93015687 | ENSMUSG00000027913 | 0.4990 | - | Crct1 | protein_coding | 2.93e-09 | 6.64e-07 | -8.26209 | 9.77e+00 | 3.46e+00 | 5.29e+00 | 5.55e-01 | 6.38e-03 | 2.43e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 130913125 | 130936141 | ENSMUSG00000028581 | 0.5309 | + | Laptm5 | protein_coding | 3.04e-09 | 6.69e-07 | -5.51640 | 7.03e+00 | 1.15e+01 | 1.14e+01 | 1.25e-02 | 2.77e-01 | 2.52e-01 | 5.64e+00 | 4.25e+00 | 5.75e+00 | 4.72e-03 | 1.73e-03 | 5.11e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34153072 | 34160230 | ENSMUSG00000079547 | 0.4883 | + | H2-DMb1 | protein_coding | 3.05e-09 | 6.69e-07 | -5.63193 | 3.00e+00 | 1.08e+01 | 1.07e+01 | 4.54e-03 | 1.12e+00 | 1.06e+00 | 2.58e+00 | 5.29e+00 | 4.52e+00 | 3.24e-03 | 2.46e-02 | 1.43e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 89199209 | 89207827 | ENSMUSG00000089929 | 0.3732 | + | Bcl2a1b | protein_coding | 3.06e-09 | 6.69e-07 | -6.70874 | 0.00e+00 | 7.81e+00 | 8.21e+00 | 0.00e+00 | 1.60e-01 | 2.12e-01 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 1.43e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 21201561 | 21202539 | ENSMUSG00000079116 | 0.4188 | + | Gm15293 | protein_coding | 3.65e-09 | 7.87e-07 | -6.78136 | 0.00e+00 | 8.44e+00 | 6.52e+00 | 0.00e+00 | 2.57e-01 | 6.77e-02 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.43e-04 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 41105381 | 41124412 | ENSMUSG00000037798 | 0.4489 | + | Mat1a | protein_coding | 3.69e-09 | 7.87e-07 | 5.35620 | 4.46e+00 | 1.58e+00 | 0.00e+00 | 6.86e-03 | 6.54e-04 | 0.00e+00 | 9.20e+00 | 7.12e+00 | 8.39e+00 | 1.93e-01 | 4.51e-02 | 1.10e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 70054085 | 70057894 | ENSMUSG00000020884 | 0.5444 | + | Asgr1 | protein_coding | 4.08e-09 | 8.62e-07 | 6.92346 | 4.81e+00 | 3.91e+00 | 0.00e+00 | 9.80e-03 | 5.08e-03 | 0.00e+00 | 1.13e+01 | 9.66e+00 | 1.09e+01 | 9.32e-01 | 2.93e-01 | 7.13e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 6658521 | 6677475 | ENSMUSG00000041046 | 0.5145 | + | Ramp3 | protein_coding | 4.15e-09 | 8.66e-07 | -6.96578 | 0.00e+00 | 7.12e+00 | 7.88e+00 | 0.00e+00 | 6.94e-02 | 1.18e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 134220053 | 134229625 | ENSMUSG00000015950 | 0.5368 | - | Ncf1 | protein_coding | 4.53e-09 | 9.27e-07 | -6.24079 | 0.00e+00 | 8.25e+00 | 8.22e+00 | 0.00e+00 | 5.38e-02 | 5.27e-02 | 1.00e+00 | 0.00e+00 | 2.32e+00 | 1.77e-04 | 0.00e+00 | 7.08e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 103646630 | 103657212 | ENSMUSG00000060807 | 0.4496 | - | Serpina6 | protein_coding | 4.54e-09 | 9.27e-07 | 5.55459 | 3.91e+00 | 1.00e+00 | 0.00e+00 | 5.15e-03 | 3.68e-04 | 0.00e+00 | 8.89e+00 | 7.46e+00 | 7.61e+00 | 1.74e-01 | 6.43e-02 | 7.13e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 129267325 | 129275436 | ENSMUSG00000030156 | 0.3780 | - | Cd69 | protein_coding | 4.68e-09 | 9.45e-07 | -5.76288 | 0.00e+00 | 7.71e+00 | 8.38e+00 | 0.00e+00 | 3.50e-02 | 5.59e-02 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 1.18e-03 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 134251110 | 134254106 | ENSMUSG00000050105 | 0.5816 | - | Grrp1 | protein_coding | 4.82e-09 | 9.62e-07 | -5.98706 | 3.91e+00 | 8.09e+00 | 7.29e+00 | 5.10e-03 | 9.91e-02 | 5.65e-02 | 0.00e+00 | 0.00e+00 | 2.32e+00 | 0.00e+00 | 0.00e+00 | 1.46e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 33794037 | 33819934 | ENSMUSG00000022824 | 0.4478 | + | Muc13 | protein_coding | 6.28e-09 | 1.24e-06 | -6.04439 | 0.00e+00 | 8.23e+00 | 7.82e+00 | 0.00e+00 | 1.30e-01 | 9.73e-02 | 1.00e+00 | 1.58e+00 | 1.58e+00 | 4.33e-04 | 8.65e-04 | 8.65e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34282744 | 34287827 | ENSMUSG00000036594 | 0.4636 | - | H2-Aa | protein_coding | 6.70e-09 | 1.31e-06 | -5.90713 | 3.91e+00 | 1.18e+01 | 1.30e+01 | 2.77e-03 | 6.96e-01 | 1.66e+00 | 6.55e+00 | 5.39e+00 | 5.98e+00 | 1.84e-02 | 8.11e-03 | 1.23e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 51763878 | 51773590 | ENSMUSG00000060615 | 0.4375 | - | Ang4 | protein_coding | 6.91e-09 | 1.34e-06 | -7.00749 | 0.00e+00 | 8.16e+00 | 6.63e+00 | 0.00e+00 | 1.99e-01 | 6.86e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 40089688 | 40113950 | ENSMUSG00000054827 | 0.3890 | + | Cyp2c50 | protein_coding | 7.35e-09 | 1.40e-06 | 5.67340 | 4.46e+00 | 2.58e+00 | 0.00e+00 | 7.40e-03 | 1.76e-03 | 0.00e+00 | 9.67e+00 | 6.93e+00 | 9.09e+00 | 2.86e-01 | 4.26e-02 | 1.91e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 134082448 | 134095082 | ENSMUSG00000000682 | 0.4953 | - | Cd52 | protein_coding | 7.92e-09 | 1.50e-06 | -5.19862 | 7.48e+00 | 1.13e+01 | 1.10e+01 | 4.51e-02 | 6.43e-01 | 5.20e-01 | 5.93e+00 | 5.09e+00 | 5.13e+00 | 1.52e-02 | 8.36e-03 | 8.61e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 66780819 | 66831829 | ENSMUSG00000022372 | 0.4494 | - | Sla | protein_coding | 8.14e-09 | 1.53e-06 | -5.31325 | 5.81e+00 | 8.30e+00 | 9.28e+00 | 1.30e-02 | 7.45e-02 | 1.47e-01 | 3.81e+00 | 2.32e+00 | 2.58e+00 | 3.08e-03 | 9.46e-04 | 1.18e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 79434669 | 79440120 | ENSMUSG00000050711 | 0.3955 | - | Scg2 | protein_coding | 9.59e-09 | 1.78e-06 | -5.98014 | 0.00e+00 | 8.42e+00 | 7.33e+00 | 0.00e+00 | 1.97e-01 | 9.23e-02 | 0.00e+00 | 1.00e+00 | 2.32e+00 | 0.00e+00 | 5.77e-04 | 2.31e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 95988429 | 95996001 | ENSMUSG00000015745 | 0.5372 | - | Plekho1 | protein_coding | 1.08e-08 | 1.98e-06 | -6.08037 | 0.00e+00 | 7.81e+00 | 8.58e+00 | 0.00e+00 | 4.07e-02 | 6.94e-02 | 0.00e+00 | 2.32e+00 | 1.58e+00 | 0.00e+00 | 7.26e-04 | 3.63e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for UI_vs_GIL.Download the whole result list for UI_vs_GIL.DEG table for the contrast TI_vs_GIHThe following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast TI_vs_GIH. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | log2_normalized_fold_change_TI_vs_GIH | log2_normalized_counts_GK3R93-TI1 | log2_normalized_counts_GK3R94-TI2 | log2_normalized_counts_GK3R95-TI3 | rpgm_normalized_counts_GK3R93-TI1 | rpgm_normalized_counts_GK3R94-TI2 | rpgm_normalized_counts_GK3R95-TI3 | log2_normalized_counts_GK3R87-GIH1 | log2_normalized_counts_GK3R89-GIH3 | rpgm_normalized_counts_GK3R87-GIH1 | rpgm_normalized_counts_GK3R89-GIH3 | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr6 | 78370657 | 78373466 | ENSMUSG00000071356 | 0.4171 | + | Reg3b | protein_coding | 6.76e-10 | 1.24e-05 | -8.659798 | 9.82e+00 | 1.13e+01 | 7.16e+00 | 3.34e-01 | 9.54e-01 | 5.23e-02 | 2.32e+00 | 0.00e+00 | 1.47e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 13796246 | 13837409 | ENSMUSG00000078798 | 0.3816 | - | Sult2a1 | protein_coding | 4.20e-09 | 3.86e-05 | 6.804131 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 2.20e-03 | 0.00e+00 | 8.76e+00 | 3.58e+00 | 3.19e-01 | 8.08e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 115470872 | 116038796 | ENSMUSG00000051910 | 0.4010 | - | Sox6 | protein_coding | 1.58e-07 | 9.69e-04 | 6.502121 | 2.00e+00 | 0.00e+00 | 1.00e+00 | 1.73e-04 | 0.00e+00 | 5.78e-05 | 6.57e+00 | 8.36e+00 | 5.43e-03 | 1.89e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 60924976 | 60989378 | ENSMUSG00000054641 | 0.3753 | + | Mmrn1 | protein_coding | 3.04e-07 | 1.36e-03 | -7.209453 | 8.38e+00 | 6.67e+00 | 3.32e+00 | 1.01e-01 | 3.10e-02 | 2.76e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 123259053 | 123260764 | ENSMUSG00000054871 | 0.6384 | - | Tmem158 | protein_coding | 4.31e-07 | 1.36e-03 | 5.138528 | 4.25e+00 | 4.64e+00 | 4.00e+00 | 1.10e-02 | 1.47e-02 | 9.20e-03 | 9.04e+00 | 9.79e+00 | 3.21e-01 | 5.41e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 172868012 | 172940321 | ENSMUSG00000008999 | 0.5207 | - | Bmp7 | protein_coding | 4.46e-07 | 1.36e-03 | 5.398250 | 4.17e+00 | 0.00e+00 | 2.81e+00 | 3.67e-03 | 0.00e+00 | 1.30e-03 | 8.46e+00 | 8.57e+00 | 7.58e-02 | 8.17e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 93187548 | 93201759 | ENSMUSG00000068735 | 0.5600 | + | Trp53i11 | protein_coding | 5.76e-07 | 1.51e-03 | 6.770829 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 2.92e-04 | 7.15e+00 | 7.79e+00 | 2.06e-02 | 3.23e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 142564837 | 142571614 | ENSMUSG00000030247 | 0.4574 | - | Kcnj8 | protein_coding | 7.12e-07 | 1.62e-03 | 6.405141 | 1.58e+00 | 0.00e+00 | 1.00e+00 | 6.95e-04 | 0.00e+00 | 3.48e-04 | 7.15e+00 | 7.62e+00 | 4.90e-02 | 6.81e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 43596049 | 43601540 | ENSMUSG00000020405 | 0.4468 | - | Fabp6 | protein_coding | 7.96e-07 | 1.62e-03 | -6.287545 | 9.64e+00 | 1.06e+01 | 8.47e+00 | 6.08e-01 | 1.17e+00 | 2.69e-01 | 4.46e+00 | 0.00e+00 | 1.60e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 90724552 | 90738438 | ENSMUSG00000007682 | 0.4209 | - | Dio2 | protein_coding | 1.02e-06 | 1.87e-03 | 5.856426 | 2.00e+00 | 1.00e+00 | 3.32e+00 | 4.91e-04 | 1.64e-04 | 1.47e-03 | 8.20e+00 | 8.34e+00 | 4.81e-02 | 5.27e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 29318877 | 29329413 | ENSMUSG00000024011 | 0.5406 | + | Pi16 | protein_coding | 1.21e-06 | 1.95e-03 | -5.580738 | 8.33e+00 | 9.22e+00 | 8.79e+00 | 1.18e-01 | 2.20e-01 | 1.63e-01 | 4.09e+00 | 1.00e+00 | 5.89e-03 | 3.68e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 103814625 | 103844173 | ENSMUSG00000022122 | 0.4093 | - | Ednrb | protein_coding | 1.28e-06 | 1.95e-03 | 4.921246 | 1.58e+00 | 5.00e+00 | 2.32e+00 | 5.42e-04 | 8.39e-03 | 1.08e-03 | 8.45e+00 | 8.84e+00 | 9.42e-02 | 1.24e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 142587862 | 142702315 | ENSMUSG00000030249 | 0.4247 | - | Abcc9 | protein_coding | 2.12e-06 | 2.95e-03 | 4.811894 | 0.00e+00 | 5.29e+00 | 3.46e+00 | 0.00e+00 | 5.34e-03 | 1.40e-03 | 8.14e+00 | 9.39e+00 | 3.95e-02 | 9.44e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 98854415 | 98884396 | ENSMUSG00000029335 | 0.4330 | + | Bmp3 | protein_coding | 2.25e-06 | 2.95e-03 | 6.661778 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.29e-04 | 0.00e+00 | 6.44e+00 | 7.52e+00 | 1.11e-02 | 2.35e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 33794037 | 33819934 | ENSMUSG00000022824 | 0.4478 | + | Muc13 | protein_coding | 5.79e-06 | 7.08e-03 | -5.857981 | 4.58e+00 | 7.13e+00 | 3.32e+00 | 9.95e-03 | 6.01e-02 | 3.89e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 78930948 | 78951733 | ENSMUSG00000022860 | 0.3748 | + | Chodl | protein_coding | 1.70e-05 | 1.95e-02 | -4.879319 | 8.73e+00 | 8.68e+00 | 8.49e+00 | 6.84e-02 | 6.59e-02 | 5.79e-02 | 2.32e+00 | 4.46e+00 | 6.47e-04 | 3.39e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127050156 | 127087328 | ENSMUSG00000049350 | 0.4615 | - | Zg16 | protein_coding | 3.84e-05 | 4.15e-02 | -4.760812 | 0.00e+00 | 6.89e+00 | 1.00e+00 | 0.00e+00 | 4.18e-02 | 3.54e-04 | 1.00e+00 | 0.00e+00 | 3.54e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 42772860 | 42773993 | ENSMUSG00000094686 | 0.5670 | - | Ccl21a | protein_coding | 4.11e-05 | 4.19e-02 | -5.425022 | 8.61e+00 | 7.39e+00 | 4.39e+00 | 2.37e-01 | 1.02e-01 | 1.22e-02 | 2.32e+00 | 2.00e+00 | 2.43e-03 | 1.82e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 69964779 | 69967885 | ENSMUSG00000018569 | 0.5848 | + | Cldn7 | protein_coding | 5.28e-05 | 5.11e-02 | -5.169925 | 3.81e+00 | 6.38e+00 | 3.46e+00 | 4.75e-03 | 3.00e-02 | 3.65e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 113302965 | 113307933 | ENSMUSG00000076613 | 0.5017 | - | Ighg2b | IG_C_gene | 8.08e-05 | 7.41e-02 | -4.564785 | 0.00e+00 | 5.88e+00 | 3.46e+00 | 0.00e+00 | 1.47e-02 | 2.53e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 32475522 | 32487879 | ENSMUSG00000035699 | 0.4808 | - | Slc51a | protein_coding | 1.01e-04 | 8.86e-02 | -5.807355 | 4.58e+00 | 7.01e+00 | 3.91e+00 | 1.56e-02 | 8.70e-02 | 9.51e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 13733505 | 13779636 | ENSMUSG00000070811 | 0.3897 | + | Sult2a2 | protein_coding | 1.26e-04 | 1.05e-01 | 5.507795 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 2.22e-03 | 0.00e+00 | 0.00e+00 | 7.50e+00 | 0.00e+00 | 1.33e-01 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 84369839 | 84696221 | ENSMUSG00000036766 | 0.4297 | - | Dner | protein_coding | 1.46e-04 | 1.11e-01 | -4.580949 | 6.91e+00 | 8.86e+00 | 7.06e+00 | 2.01e-02 | 7.82e-02 | 2.22e-02 | 3.17e+00 | 3.46e+00 | 1.35e-03 | 1.69e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for TI_vs_GIH.Download the whole result list for TI_vs_GIH.DEG table for the contrast TI_vs_GILThe following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast TI_vs_GIL. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | log2_normalized_fold_change_TI_vs_GIL | log2_normalized_counts_GK3R93-TI1 | log2_normalized_counts_GK3R94-TI2 | log2_normalized_counts_GK3R95-TI3 | rpgm_normalized_counts_GK3R93-TI1 | rpgm_normalized_counts_GK3R94-TI2 | rpgm_normalized_counts_GK3R95-TI3 | log2_normalized_counts_GK3R90-GIL1 | log2_normalized_counts_GK3R91-GIL2 | log2_normalized_counts_GK3R92-GIL3 | rpgm_normalized_counts_GK3R90-GIL1 | rpgm_normalized_counts_GK3R91-GIL2 | rpgm_normalized_counts_GK3R92-GIL3 | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr6 | 78370657 | 78373466 | ENSMUSG00000071356 | 0.4171 | + | Reg3b | protein_coding | 2.47e-15 | 4.54e-11 | -9.829723 | 9.82e+00 | 1.13e+01 | 7.16e+00 | 3.34e-01 | 9.54e-01 | 5.23e-02 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.68e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 43596049 | 43601540 | ENSMUSG00000020405 | 0.4468 | - | Fabp6 | protein_coding | 9.00e-12 | 8.26e-08 | -7.936638 | 9.64e+00 | 1.06e+01 | 8.47e+00 | 6.08e-01 | 1.17e+00 | 2.69e-01 | 2.58e+00 | 2.00e+00 | 0.00e+00 | 3.80e-03 | 2.28e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 42772860 | 42773993 | ENSMUSG00000094686 | 0.5670 | - | Ccl21a | protein_coding | 2.67e-11 | 1.64e-07 | -7.594947 | 8.61e+00 | 7.39e+00 | 4.39e+00 | 2.37e-01 | 1.02e-01 | 1.22e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 60924976 | 60989378 | ENSMUSG00000054641 | 0.3753 | + | Mmrn1 | protein_coding | 6.56e-09 | 3.01e-05 | -7.209453 | 8.38e+00 | 6.67e+00 | 3.32e+00 | 1.01e-01 | 3.10e-02 | 2.76e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 13796246 | 13837409 | ENSMUSG00000078798 | 0.3816 | - | Sult2a1 | protein_coding | 2.24e-08 | 8.24e-05 | 5.969626 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 2.20e-03 | 0.00e+00 | 4.09e+00 | 8.20e+00 | 6.02e+00 | 1.18e-02 | 2.15e-01 | 4.70e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 69964779 | 69967885 | ENSMUSG00000018569 | 0.5848 | + | Cldn7 | protein_coding | 1.08e-06 | 3.30e-03 | -5.169925 | 3.81e+00 | 6.38e+00 | 3.46e+00 | 4.75e-03 | 3.00e-02 | 3.65e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 32475522 | 32487879 | ENSMUSG00000035699 | 0.4808 | - | Slc51a | protein_coding | 2.70e-06 | 7.08e-03 | -5.807355 | 4.58e+00 | 7.01e+00 | 3.91e+00 | 1.56e-02 | 8.70e-02 | 9.51e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 45079183 | 45108534 | ENSMUSG00000048534 | 0.4642 | + | Jaml | protein_coding | 4.47e-06 | 9.27e-03 | -3.544321 | 0.00e+00 | 3.46e+00 | 4.52e+00 | 0.00e+00 | 2.06e-03 | 4.54e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 127705170 | 127720940 | ENSMUSG00000025401 | 0.5282 | + | Myo1a | protein_coding | 5.07e-06 | 9.27e-03 | -5.502500 | 4.25e+00 | 6.78e+00 | 2.81e+00 | 1.22e-02 | 7.40e-02 | 4.07e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 76792333 | 76795554 | ENSMUSG00000042808 | 0.4808 | - | Gpx2 | protein_coding | 5.41e-06 | 9.27e-03 | -4.643856 | 4.25e+00 | 5.81e+00 | 4.64e+00 | 1.15e-02 | 3.51e-02 | 1.53e-02 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 6.37e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 43728069 | 43737237 | ENSMUSG00000024503 | 0.3967 | - | Spink1 | protein_coding | 5.55e-06 | 9.27e-03 | -4.643856 | 5.04e+00 | 6.58e+00 | 4.39e+00 | 2.38e-02 | 7.07e-02 | 1.49e-02 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 2.23e-03 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 144242296 | 144249242 | ENSMUSG00000026358 | 0.3610 | - | Rgs1 | protein_coding | 7.62e-06 | 1.17e-02 | -4.485427 | 5.73e+00 | 5.13e+00 | 4.58e+00 | 6.08e-03 | 3.97e-03 | 2.69e-03 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 2.34e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 112850873 | 112868228 | ENSMUSG00000021298 | 0.5099 | - | Gpr132 | protein_coding | 8.51e-06 | 1.20e-02 | -5.073249 | 5.36e+00 | 5.46e+00 | 4.00e+00 | 1.08e-02 | 1.17e-02 | 4.07e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127050156 | 127087328 | ENSMUSG00000049350 | 0.4615 | - | Zg16 | protein_coding | 1.37e-05 | 1.69e-02 | -4.608809 | 0.00e+00 | 6.89e+00 | 1.00e+00 | 0.00e+00 | 4.18e-02 | 3.54e-04 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 7.08e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 6105782 | 6115792 | ENSMUSG00000054999 | 0.5189 | + | Naaladl1 | protein_coding | 1.38e-05 | 1.69e-02 | -5.426265 | 4.95e+00 | 6.44e+00 | 3.46e+00 | 2.01e-02 | 5.78e-02 | 6.72e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 141690340 | 141754693 | ENSMUSG00000025515 | 0.5191 | + | Muc2 | protein_coding | 2.54e-05 | 2.91e-02 | -4.196397 | 0.00e+00 | 5.70e+00 | 1.00e+00 | 0.00e+00 | 6.56e-03 | 1.29e-04 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 107088492 | 107104974 | ENSMUSG00000050921 | 0.3519 | + | P2ry10 | protein_coding | 2.73e-05 | 2.95e-02 | -4.604862 | 3.17e+00 | 5.17e+00 | 4.81e+00 | 2.88e-03 | 1.26e-02 | 9.72e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 134251110 | 134254106 | ENSMUSG00000050105 | 0.5816 | - | Grrp1 | protein_coding | 3.08e-05 | 3.04e-02 | -4.792558 | 7.48e+00 | 0.00e+00 | 3.91e+00 | 6.45e-02 | 0.00e+00 | 5.10e-03 | 0.00e+00 | 0.00e+00 | 2.32e+00 | 0.00e+00 | 0.00e+00 | 1.46e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 135120652 | 135177990 | ENSMUSG00000070691 | 0.5375 | + | Runx3 | protein_coding | 3.14e-05 | 3.04e-02 | -3.502500 | 1.58e+00 | 3.46e+00 | 4.32e+00 | 4.06e-04 | 2.03e-03 | 3.85e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 140093395 | 140097200 | ENSMUSG00000025467 | 0.5347 | + | Prap1 | protein_coding | 3.66e-05 | 3.23e-02 | -5.470320 | 5.36e+00 | 6.44e+00 | 2.32e+00 | 2.95e-02 | 6.34e-02 | 2.95e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 6658521 | 6677475 | ENSMUSG00000041046 | 0.5145 | + | Ramp3 | protein_coding | 3.69e-05 | 3.23e-02 | -4.169925 | 3.70e+00 | 3.32e+00 | 4.95e+00 | 6.03e-03 | 4.52e-03 | 1.51e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 35647266 | 35649367 | ENSMUSG00000024353 | 0.5295 | - | Mzb1 | protein_coding | 4.06e-05 | 3.39e-02 | -4.131074 | 6.15e+00 | 7.98e+00 | 6.30e+00 | 4.50e-02 | 1.62e-01 | 5.01e-02 | 3.00e+00 | 3.17e+00 | 2.58e+00 | 4.50e-03 | 5.14e-03 | 3.21e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 31187558 | 31193430 | ENSMUSG00000029145 | 0.5043 | - | Eif2b4 | protein_coding | 5.33e-05 | 4.25e-02 | -2.857981 | 6.29e+00 | 6.25e+00 | 1.00e+01 | 9.95e-03 | 9.69e-03 | 1.34e-01 | 5.88e+00 | 5.58e+00 | 5.83e+00 | 7.50e-03 | 6.07e-03 | 7.24e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 126593667 | 126619299 | ENSMUSG00000027360 | 0.4782 | - | Hdc | protein_coding | 5.93e-05 | 4.50e-02 | -4.533979 | 6.82e+00 | 3.91e+00 | 3.46e+00 | 1.71e-02 | 2.14e-03 | 1.53e-03 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 4.58e-04 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 122279247 | 122298165 | ENSMUSG00000068452 | 0.5145 | - | Duox2 | protein_coding | 6.82e-05 | 4.50e-02 | -4.502500 | 4.00e+00 | 5.46e+00 | 3.00e+00 | 4.06e-03 | 1.16e-02 | 1.89e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83662584 | 83664683 | ENSMUSG00000018930 | 0.4457 | + | Ccl4 | protein_coding | 6.84e-05 | 4.50e-02 | -3.748938 | 4.52e+00 | 6.43e+00 | 3.58e+00 | 1.42e-02 | 5.47e-02 | 7.08e-03 | 2.58e+00 | 1.00e+00 | 0.00e+00 | 3.22e-03 | 6.44e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for TI_vs_GIL.Download the whole result list for TI_vs_GIL.DEG table for the contrast GIH_vs_GILThe following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast GIH_vs_GIL. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | log2_normalized_fold_change_GIH_vs_GIL | log2_normalized_counts_GK3R87-GIH1 | log2_normalized_counts_GK3R89-GIH3 | rpgm_normalized_counts_GK3R87-GIH1 | rpgm_normalized_counts_GK3R89-GIH3 | log2_normalized_counts_GK3R90-GIL1 | log2_normalized_counts_GK3R91-GIL2 | log2_normalized_counts_GK3R92-GIL3 | rpgm_normalized_counts_GK3R90-GIL1 | rpgm_normalized_counts_GK3R91-GIL2 | rpgm_normalized_counts_GK3R92-GIL3 | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr12 | 90724552 | 90738438 | ENSMUSG00000007682 | 0.4209 | - | Dio2 | protein_coding | 1.49e-07 | 0.00273 | -5.856426 | 8.20e+00 | 8.34e+00 | 4.81e-02 | 5.27e-02 | 0.00e+00 | 3.17e+00 | 2.58e+00 | 0.00e+00 | 1.31e-03 | 8.18e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 103814625 | 103844173 | ENSMUSG00000022122 | 0.4093 | - | Ednrb | protein_coding | 7.45e-05 | 0.37902 | -3.767441 | 8.45e+00 | 8.84e+00 | 9.42e-02 | 1.24e-01 | 4.52e+00 | 3.70e+00 | 5.73e+00 | 5.96e-03 | 3.25e-03 | 1.41e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 172868012 | 172940321 | ENSMUSG00000008999 | 0.5207 | - | Bmp7 | protein_coding | 7.46e-05 | 0.37902 | -3.655747 | 8.46e+00 | 8.57e+00 | 7.58e-02 | 8.17e-02 | 5.39e+00 | 4.25e+00 | 4.70e+00 | 8.86e-03 | 3.89e-03 | 5.40e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 123259053 | 123260764 | ENSMUSG00000054871 | 0.6384 | - | Tmem158 | protein_coding | 8.26e-05 | 0.37902 | -3.483176 | 9.04e+00 | 9.79e+00 | 3.21e-01 | 5.41e-01 | 6.19e+00 | 5.21e+00 | 6.30e+00 | 4.41e-02 | 2.21e-02 | 4.78e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 115470872 | 116038796 | ENSMUSG00000051910 | 0.4010 | - | Sox6 | protein_coding | 1.13e-04 | 0.41349 | -4.222014 | 6.57e+00 | 8.36e+00 | 5.43e-03 | 1.89e-02 | 3.17e+00 | 2.00e+00 | 4.39e+00 | 4.62e-04 | 1.73e-04 | 1.16e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 104170442 | 104219122 | ENSMUSG00000031872 | 0.4752 | + | Bean1 | protein_coding | 1.38e-04 | 0.42287 | -4.598425 | 6.82e+00 | 7.71e+00 | 3.60e-02 | 6.73e-02 | 1.00e+00 | 3.32e+00 | 3.00e+00 | 3.22e-04 | 2.90e-03 | 2.25e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 17306335 | 17341452 | ENSMUSG00000007655 | 0.4210 | + | Cav1 | protein_coding | 1.79e-04 | 0.44066 | -3.217958 | 7.67e+00 | 7.60e+00 | 2.78e-02 | 2.66e-02 | 5.55e+00 | 3.00e+00 | 3.17e+00 | 6.34e-03 | 9.65e-04 | 1.10e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 70156197 | 70170834 | ENSMUSG00000000318 | 0.4728 | + | Clec10a | protein_coding | 1.92e-04 | 0.44066 | -3.392317 | 4.32e+00 | 0.00e+00 | 3.24e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 142587862 | 142702315 | ENSMUSG00000030249 | 0.4247 | - | Abcc9 | protein_coding | 2.99e-04 | 0.60211 | -3.274866 | 8.14e+00 | 9.39e+00 | 3.95e-02 | 9.44e-02 | 5.55e+00 | 4.58e+00 | 6.27e+00 | 6.46e-03 | 3.23e-03 | 1.07e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 75114894 | 75309262 | ENSMUSG00000053025 | 0.4272 | - | Sv2b | protein_coding | 3.37e-04 | 0.60211 | -4.111031 | 6.79e+00 | 7.47e+00 | 7.14e-03 | 1.14e-02 | 3.46e+00 | 2.32e+00 | 3.17e+00 | 6.49e-04 | 2.59e-04 | 5.19e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for GIH_vs_GIL.Download the whole result list for GIH_vs_GIL.Download the raw read counts table for the experiment.Download the normalized read counts table for the experiment.
References
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