Contents
SummaryFiguresResultsReferences
|
Summary
Analysis summary
Summary:
The raw bam files, one for each RNA-Seq sample, were summarized to read counts table, using the Bioconductor package GenomicRanges. In the final read counts table, each row represented each column one RNA-Seq sample and each cell, the corresponding read counts associated with each row and column.The gene counts table was normalized for inherent systematic or experimental biases (e.g. sequencing depth, gene length, GC content bias etc.) using the Bioconductor package DESeq after removing genes that had zero counts over all the RNA-Seq samples (17287 genes). The output of the normalization algorithm was a table with normalized counts, which can be used for differential expression analysis with statistical algorithms developed specifically for count data. Prior to the statistical testing procedure, the gene read counts were filtered for possible artifacts that could affect the subsequent statistical testing procedures. Genes presenting any of the following were excluded from further analysis: i) genes with length less than 500 (5310 genes), ii) genes whose average reads per 100 bp was less than the 25th quantile of the total normalized distribution of average reads per 100bp (0 genes with cutoff value 0 average reads per 100 bp), iii) genes with read counts below the median read counts of the total normalized count distribution (10486 genes with cutoff value 2 normalized read counts). The total number of genes excluded due to the application of gene filters was 5468. The total (unified) number of genes excluded due to the application of all filters was 30295. The resulting gene counts table was subjected to differential expression analysis for the contrasts group1 versus group2, group1 versus group3, group1 versus group4, group2 versus group3, group3 versus group4, group5 versus group6, group5 versus group7, group5 versus group8, group7 versus group8, group6 versus group7, group1 versus group5, group2 versus group6, group3 versus group7, group4 versus group8 using the Bioconductor package DESeq. The final numbers of differentially expressed genes were (per contrast): for the contrast group1 versus group2, 541 (47) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 381 (37) were up-regulated, 160 (10) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group1 versus group3, 364 (15) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 140 (5) were up-regulated, 222 (10) were down-regulated and 2 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group1 versus group4, 603 (6) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 521 (2) were up-regulated, 82 (4) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group2 versus group3, 339 (42) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 43 (1) were up-regulated, 296 (41) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group3 versus group4, 766 (3) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 625 (2) were up-regulated, 141 (1) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group5 versus group6, 741 (75) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 408 (55) were up-regulated, 327 (20) were down-regulated and 6 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group5 versus group7, 285 (35) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 122 (6) were up-regulated, 160 (29) were down-regulated and 3 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group5 versus group8, 425 (51) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 291 (29) were up-regulated, 133 (22) were down-regulated and 1 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group7 versus group8, 510 (62) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 382 (51) were up-regulated, 127 (11) were down-regulated and 1 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group6 versus group7, 982 (121) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 460 (18) were up-regulated, 518 (103) were down-regulated and 4 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group1 versus group5, 1912 (670) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 704 (192) were up-regulated, 1203 (478) were down-regulated and 5 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group2 versus group6, 1447 (454) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 446 (111) were up-regulated, 999 (343) were down-regulated and 2 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group3 versus group7, 1908 (680) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 756 (219) were up-regulated, 1151 (461) were down-regulated and 1 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale, for the contrast group4 versus group8, 2272 (706) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 669 (146) were up-regulated, 1603 (560) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale. Literature references for all the algorithms used can be found at the end of this report.
Read counts file: imported sam/bam/bed files
Conditions: group1, group2, group3, group4, group5, group6, group7, group8
Samples included: 1_Wt_1_SFs, 2_Wt_2_SFs, 3_Wt_3_SFs, 4_Tg197_1_SFs, 5_Tg197_2_SFs, 6_Tg197_3_SFs, 7_TNF_DeltaARE_1_SFs, 8_TNF_DeltaARE_2_SFs, 9_TNF_DeltaARE_3_SFs, 10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs, 11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs, 12_Wt_1_VICs, 13_Wt_2_VICs, 14_Wt_3_VICs, 15_Tg197_1_VICs, 16_Tg197_2_VICs, 17_Tg197_3_VICs, 18_TNF_DeltaARE_1_VICs, 19_TNF_DeltaARE_2_VICs, 20_TNF_DeltaARE_3_VICs, 21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs, 22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs, 23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs
Samples excluded:
none
Requested contrasts: group1_vs_group2, group1_vs_group3, group1_vs_group4, group2_vs_group3, group3_vs_group4, group5_vs_group6, group5_vs_group7, group5_vs_group8, group7_vs_group8, group6_vs_group7, group1_vs_group5, group2_vs_group6, group3_vs_group7, group4_vs_group8
Library sizes:
- 1_Wt_1_SFs: 2901263
- 2_Wt_2_SFs: 4345701
- 3_Wt_3_SFs: 4972487
- 4_Tg197_1_SFs: 4039468
- 5_Tg197_2_SFs: 2585237
- 6_Tg197_3_SFs: 3288232
- 7_TNF_DeltaARE_1_SFs: 2872972
- 8_TNF_DeltaARE_2_SFs: 4836840
- 9_TNF_DeltaARE_3_SFs: 3410491
- 10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs: 2860948
- 11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs: 4066462
- 12_Wt_1_VICs: 8652395
- 13_Wt_2_VICs: 6676804
- 14_Wt_3_VICs: 3366957
- 15_Tg197_1_VICs: 4311578
- 16_Tg197_2_VICs: 3964044
- 17_Tg197_3_VICs: 7155049
- 18_TNF_DeltaARE_1_VICs: 4584818
- 19_TNF_DeltaARE_2_VICs: 8111664
- 20_TNF_DeltaARE_3_VICs: 7159777
- 21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs: 7030889
- 22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs: 6034045
- 23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs: 4341818
Annotation: download
Organism: mouse ( Mus musculus), genome version alias mm10
Annotation source: Ensembl genomes
Count type: utr
Exon filters:
none applied
Gene filters:
length, avg.reads, expression, biotype - avg.reads
- average.per.bp: 100
- quantile: 0.25
- expression
- median: TRUE
- mean: FALSE
- quantile: NA
- known: NA
- custom: NA
- biotype
- pseudogene: FALSE
- snRNA: FALSE
- protein_coding: FALSE
- antisense: FALSE
- miRNA: FALSE
- snoRNA: FALSE
- lincRNA: FALSE
- processed_transcript: FALSE
- misc_RNA: FALSE
- rRNA: TRUE
- sense_intronic: FALSE
- sense_overlapping: FALSE
- polymorphic_pseudogene: FALSE
- IG_C_gene: FALSE
- IG_J_gene: FALSE
- IG_D_gene: FALSE
- IG_LV_gene: FALSE
- IG_V_gene: FALSE
- IG_V_pseudogene: TRUE
- TR_V_gene: FALSE
- TR_V_pseudogene: TRUE
- three_prime_overlapping_ncrna: FALSE
Filter application: after normalization
Normalization algorithm: DESeq
Normalization arguments:
locfunc - [[list(locfunc = function (x, na.rm = FALSE)
standardGeneric("median"))locfunc
Statistical algorithm(s): DESeq
Statistical arguments for DESeq: method, sharingMode, fitType - method: blind
- sharingMode: fit-only
- fitType: local
Meta-analysis method: no meta-analysis, reported p-values from the first supplied statistical algorithm
Multiple testing correction: Benjamini-Hochberg FDR
p-value threshold: 0.05
Logarithmic tranformation offset: 1
Analysis preset: not available
Quality control plots: multidimensional scaling, biotype detection, biotype counts, sample and biotype saturation, filtered biotypes, correlation heatmap and correlogram, pairwise scatterplots between samples, boxplots, GC-content bias, transcript length bias, mean-difference plot, mean-variance plot, DEG biotype detection, volcano plot, DEG heatmap
Figure format: png
Output directory: ~/a/tools/rna/metaseqr/testOut/metaseqr_quantseq_ms_deseq_22122016
Output data: Annotation, p-value, Adjusted p-value (FDR), Fold change, Read counts
Output scale(s): Natural scale, log2 scale, Reads per Gene Model
Output values: Normalized values
Output statistics: Mean, Median, Standard deviation, Median Absolute Deviation (MAD), Coefficient of Variation, Robust Coefficient of Variation
Total run time: 39 minutes 50 seconds
Filtered genes
Number of filtered genes: 30295 which is the union of
- Filtered because of zero reads: 17287
-
Filtered because of exon filters: 0
-
Filtered because of gene filters: 13008
which is the union of
- length: 5310 genes with filter cutoff value 500
- avg.reads: 0 genes with filter cutoff value 0
- expression: 10486 genes further decomposed to (filter name, filtered genes, filter cutoff):
- median: 10486 genes with filter cutoff value 2
- biotype: 157 genes with filter cutoff value rRNA, IG_V_pseudogene, TR_V_pseudogene
Differentially expressed genes
Number of differentially expressed genes per contrast:
- group1_vs_group2: 541 (47) statistically significant genes of which 381 (37) up regulated, 160 (10) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group1_vs_group3: 364 (15) statistically significant genes of which 140 (5) up regulated, 222 (10) down regulated and 2 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group1_vs_group4: 603 (6) statistically significant genes of which 521 (2) up regulated, 82 (4) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group2_vs_group3: 339 (42) statistically significant genes of which 43 (1) up regulated, 296 (41) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group3_vs_group4: 766 (3) statistically significant genes of which 625 (2) up regulated, 141 (1) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group5_vs_group6: 741 (75) statistically significant genes of which 408 (55) up regulated, 327 (20) down regulated and 6 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group5_vs_group7: 285 (35) statistically significant genes of which 122 (6) up regulated, 160 (29) down regulated and 3 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group5_vs_group8: 425 (51) statistically significant genes of which 291 (29) up regulated, 133 (22) down regulated and 1 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group7_vs_group8: 510 (62) statistically significant genes of which 382 (51) up regulated, 127 (11) down regulated and 1 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group6_vs_group7: 982 (121) statistically significant genes of which 460 (18) up regulated, 518 (103) down regulated and 4 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group1_vs_group5: 1912 (670) statistically significant genes of which 704 (192) up regulated, 1203 (478) down regulated and 5 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group2_vs_group6: 1447 (454) statistically significant genes of which 446 (111) up regulated, 999 (343) down regulated and 2 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group3_vs_group7: 1908 (680) statistically significant genes of which 756 (219) up regulated, 1151 (461) down regulated and 1 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- group4_vs_group8: 2272 (706) statistically significant genes of which 669 (146) up regulated, 1603 (560) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
Run log[ 2016-12-22 15:22:03 ] INFO 2016-12-22 15:22:03: Data processing started... [ 2016-12-22 15:22:03 ] INFO Read counts file: imported sam/bam/bed files [ 2016-12-22 15:22:03 ] INFO Conditions: group1, group2, group3, group4, group5, group6, group7, group8 [ 2016-12-22 15:22:03 ] INFO Samples to include: 1_Wt_1_SFs, 2_Wt_2_SFs, 3_Wt_3_SFs, 4_Tg197_1_SFs, 5_Tg197_2_SFs, 6_Tg197_3_SFs, 7_TNF_DeltaARE_1_SFs, 8_TNF_DeltaARE_2_SFs, 9_TNF_DeltaARE_3_SFs, 10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs, 11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs, 12_Wt_1_VICs, 13_Wt_2_VICs, 14_Wt_3_VICs, 15_Tg197_1_VICs, 16_Tg197_2_VICs, 17_Tg197_3_VICs, 18_TNF_DeltaARE_1_VICs, 19_TNF_DeltaARE_2_VICs, 20_TNF_DeltaARE_3_VICs, 21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs, 22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs, 23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs [ 2016-12-22 15:22:03 ] INFO Samples to exclude: none [ 2016-12-22 15:22:03 ] INFO Requested contrasts: group1_vs_group2, group1_vs_group3, group1_vs_group4, group2_vs_group3, group3_vs_group4, group5_vs_group6, group5_vs_group7, group5_vs_group8, group7_vs_group8, group6_vs_group7, group1_vs_group5, group2_vs_group6, group3_vs_group7, group4_vs_group8 [ 2016-12-22 15:22:03 ] INFO Annotation: download [ 2016-12-22 15:22:03 ] INFO Organism: mm10 [ 2016-12-22 15:22:03 ] INFO Reference source: ensembl [ 2016-12-22 15:22:03 ] INFO Count type: utr [ 2016-12-22 15:22:03 ] INFO Exon filters: none applied [ 2016-12-22 15:22:03 ] INFO Gene filters: length, avg.reads, expression, biotype [ 2016-12-22 15:22:03 ] INFO length: [ 2016-12-22 15:22:03 ] INFO length: 500 [ 2016-12-22 15:22:03 ] INFO avg.reads: [ 2016-12-22 15:22:03 ] INFO average.per.bp: 100 [ 2016-12-22 15:22:03 ] INFO quantile: 0.25 [ 2016-12-22 15:22:03 ] INFO expression: [ 2016-12-22 15:22:03 ] INFO median: TRUE [ 2016-12-22 15:22:03 ] INFO mean: FALSE [ 2016-12-22 15:22:03 ] INFO quantile: NA [ 2016-12-22 15:22:03 ] INFO known: NA [ 2016-12-22 15:22:03 ] INFO custom: NA [ 2016-12-22 15:22:03 ] INFO biotype: [ 2016-12-22 15:22:03 ] INFO pseudogene: FALSE [ 2016-12-22 15:22:03 ] INFO snRNA: FALSE [ 2016-12-22 15:22:03 ] INFO protein_coding: FALSE [ 2016-12-22 15:22:03 ] INFO antisense: FALSE [ 2016-12-22 15:22:03 ] INFO miRNA: FALSE [ 2016-12-22 15:22:03 ] INFO snoRNA: FALSE [ 2016-12-22 15:22:03 ] INFO lincRNA: FALSE [ 2016-12-22 15:22:03 ] INFO processed_transcript: FALSE [ 2016-12-22 15:22:03 ] INFO misc_RNA: FALSE [ 2016-12-22 15:22:03 ] INFO rRNA: TRUE [ 2016-12-22 15:22:03 ] INFO sense_intronic: FALSE [ 2016-12-22 15:22:03 ] INFO sense_overlapping: FALSE [ 2016-12-22 15:22:03 ] INFO polymorphic_pseudogene: FALSE [ 2016-12-22 15:22:03 ] INFO IG_C_gene: FALSE [ 2016-12-22 15:22:03 ] INFO IG_J_gene: FALSE [ 2016-12-22 15:22:03 ] INFO IG_D_gene: FALSE [ 2016-12-22 15:22:03 ] INFO IG_LV_gene: FALSE [ 2016-12-22 15:22:03 ] INFO IG_V_gene: FALSE [ 2016-12-22 15:22:03 ] INFO IG_V_pseudogene: TRUE [ 2016-12-22 15:22:03 ] INFO TR_V_gene: FALSE [ 2016-12-22 15:22:03 ] INFO TR_V_pseudogene: TRUE [ 2016-12-22 15:22:03 ] INFO three_prime_overlapping_ncrna: FALSE [ 2016-12-22 15:22:03 ] INFO Filter application: postnorm [ 2016-12-22 15:22:03 ] INFO Normalization algorithm: deseq [ 2016-12-22 15:22:03 ] INFO Normalization arguments: [ 2016-12-22 15:22:03 ] INFO locfunc: [ 2016-12-22 15:22:03 ] INFO [[ [ 2016-12-22 15:22:03 ] INFO list(locfunc = function (x, na.rm = FALSE) standardGeneric("median")) [ 2016-12-22 15:22:03 ] INFO locfunc [ 2016-12-22 15:22:03 ] INFO Statistical algorithm: deseq [ 2016-12-22 15:22:03 ] INFO Statistical arguments: [ 2016-12-22 15:22:03 ] INFO deseq: blind, fit-only, local [ 2016-12-22 15:22:03 ] INFO Meta-analysis method: none [ 2016-12-22 15:22:03 ] INFO Multiple testing correction: BH [ 2016-12-22 15:22:03 ] INFO p-value threshold: 0.05 [ 2016-12-22 15:22:03 ] INFO Logarithmic transformation offset: 1 [ 2016-12-22 15:22:03 ] INFO Quality control plots: mds, biodetection, countsbio, saturation, readnoise, filtered, correl, pairwise, boxplot, gcbias, lengthbias, meandiff, meanvar, biodist, volcano, deheatmap [ 2016-12-22 15:22:03 ] INFO Figure format: png [ 2016-12-22 15:22:03 ] INFO Output directory: ~/a/tools/rna/metaseqr/testOut/metaseqr_quantseq_ms_deseq_22122016 [ 2016-12-22 15:22:03 ] INFO Output data: annotation, p.value, adj.p.value, fold.change, counts, flags [ 2016-12-22 15:22:03 ] INFO Output scale(s): natural, log2, rpgm [ 2016-12-22 15:22:03 ] INFO Output values: normalized [ 2016-12-22 15:22:03 ] INFO Downloading gene annotation for mm10... [ 2016-12-22 15:22:11 ] INFO Downloading transcript annotation for mm10... [ 2016-12-22 15:24:00 ] INFO Converting annotation to GenomicRanges object... [ 2016-12-22 15:24:00 ] INFO Merging transcript 3' UTRs to create unique gene/transcript models... [ 2016-12-22 15:27:16 ] INFO Flanking merged transcript 3' UTRs per 500bp... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R54-MS1.bam for sample with name 1_Wt_1_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R55-MS2.bam for sample with name 2_Wt_2_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R56-MS3.bam for sample with name 3_Wt_3_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R57-MS4.bam for sample with name 4_Tg197_1_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R58-MS5.bam for sample with name 5_Tg197_2_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R59-MS6.bam for sample with name 6_Tg197_3_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R60-MS7.bam for sample with name 7_TNF_DeltaARE_1_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R61-MS8.bam for sample with name 8_TNF_DeltaARE_2_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R62-MS9.bam for sample with name 9_TNF_DeltaARE_3_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R63-MS10.bam for sample with name 10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R64-MS11.bam for sample with name 11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs. This might take some time... [ 2016-12-22 15:27:20 ] INFO Reading bam file GK3R65-MS12.bam for sample with name 12_Wt_1_VICs. This might take some time... [ 2016-12-22 15:27:21 ] INFO Reading bam file GK3R66-MS13.bam for sample with name 13_Wt_2_VICs. This might take some time... [ 2016-12-22 15:27:21 ] INFO Reading bam file GK3R67-MS14.bam for sample with name 14_Wt_3_VICs. This might take some time... [ 2016-12-22 15:27:21 ] INFO Reading bam file GK3R68-MS15.bam for sample with name 15_Tg197_1_VICs. This might take some time... [ 2016-12-22 15:27:21 ] INFO Reading bam file GK3R69-MS16.bam for sample with name 16_Tg197_2_VICs. This might take some time... [ 2016-12-22 15:27:21 ] INFO Reading bam file GK3R70-MS17.bam for sample with name 17_Tg197_3_VICs. This might take some time... [ 2016-12-22 15:27:21 ] INFO Reading bam file GK3R72-MS19.bam for sample with name 19_TNF_DeltaARE_2_VICs. This might take some time... [ 2016-12-22 15:27:21 ] INFO Reading bam file GK3R71-MS18.bam for sample with name 18_TNF_DeltaARE_1_VICs. This might take some time... [ 2016-12-22 15:27:21 ] INFO Reading bam file GK3R73-MS20.bam for sample with name 20_TNF_DeltaARE_3_VICs. This might take some time... [ 2016-12-22 15:27:25 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:25 ] INFO ...for single-end reads... [ 2016-12-22 15:27:25 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:25 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:25 ] INFO ...for single-end reads... [ 2016-12-22 15:27:25 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:25 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:25 ] INFO ...for single-end reads... [ 2016-12-22 15:27:25 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:25 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:25 ] INFO ...for single-end reads... [ 2016-12-22 15:27:25 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:26 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:26 ] INFO ...for single-end reads... [ 2016-12-22 15:27:26 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:26 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:26 ] INFO ...for single-end reads... [ 2016-12-22 15:27:26 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:26 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:26 ] INFO ...for single-end reads... [ 2016-12-22 15:27:26 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:27 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:27 ] INFO ...for single-end reads... [ 2016-12-22 15:27:27 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:28 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:28 ] INFO ...for single-end reads... [ 2016-12-22 15:27:28 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:28 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:28 ] INFO ...for single-end reads... [ 2016-12-22 15:27:28 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:28 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:28 ] INFO ...for single-end reads... [ 2016-12-22 15:27:28 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:28 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:28 ] INFO ...for single-end reads... [ 2016-12-22 15:27:28 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:29 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:29 ] INFO ...for single-end reads... [ 2016-12-22 15:27:29 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:29 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:29 ] INFO ...for single-end reads... [ 2016-12-22 15:27:29 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:30 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:30 ] INFO ...for single-end reads... [ 2016-12-22 15:27:30 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:31 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:31 ] INFO ...for single-end reads... [ 2016-12-22 15:27:31 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:34 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:34 ] INFO ...for single-end reads... [ 2016-12-22 15:27:34 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:34 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:34 ] INFO ...for single-end reads... [ 2016-12-22 15:27:34 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:34 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:34 ] INFO ...for single-end reads... [ 2016-12-22 15:27:34 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:36 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:27:36 ] INFO ...for single-end reads... [ 2016-12-22 15:27:36 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:27:50 ] INFO Reading bam file GK3R74-MS21.bam for sample with name 21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs. This might take some time... [ 2016-12-22 15:28:01 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:28:01 ] INFO ...for single-end reads... [ 2016-12-22 15:28:01 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:28:13 ] INFO Reading bam file GK3R75-MS22.bam for sample with name 22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs. This might take some time... [ 2016-12-22 15:28:18 ] INFO Reading bam file GK3R76-MS23.bam for sample with name 23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs. This might take some time... [ 2016-12-22 15:28:25 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:28:25 ] INFO ...for single-end reads... [ 2016-12-22 15:28:25 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:28:29 ] INFO Counting reads overlapping with given annotation... [ 2016-12-22 15:28:29 ] INFO ...for single-end reads... [ 2016-12-22 15:28:29 ] INFO ...assuming forward sequenced reads... [ 2016-12-22 15:29:02 ] INFO Exporting raw read counts table to ~/a/tools/rna/metaseqr/testOut/metaseqr_quantseq_ms_deseq_22122016/lists/raw_counts_table.txt.gz [ 2016-12-22 15:29:07 ] INFO Checking chromosomes in transcript counts and gene annotation... [ 2016-12-22 15:29:07 ] INFO Processing transcripts... [ 2016-12-22 15:29:07 ] INFO Separating transcripts (UTR regions) per gene for 1_Wt_1_SFs... [ 2016-12-22 15:29:26 ] INFO Separating transcripts (UTR regions) per gene for 2_Wt_2_SFs... [ 2016-12-22 15:29:47 ] INFO Separating transcripts (UTR regions) per gene for 3_Wt_3_SFs... [ 2016-12-22 15:30:12 ] INFO Separating transcripts (UTR regions) per gene for 4_Tg197_1_SFs... [ 2016-12-22 15:30:38 ] INFO Separating transcripts (UTR regions) per gene for 5_Tg197_2_SFs... [ 2016-12-22 15:31:02 ] INFO Separating transcripts (UTR regions) per gene for 6_Tg197_3_SFs... [ 2016-12-22 15:31:32 ] INFO Separating transcripts (UTR regions) per gene for 7_TNF_DeltaARE_1_SFs... [ 2016-12-22 15:31:59 ] INFO Separating transcripts (UTR regions) per gene for 8_TNF_DeltaARE_2_SFs... [ 2016-12-22 15:32:27 ] INFO Separating transcripts (UTR regions) per gene for 9_TNF_DeltaARE_3_SFs... [ 2016-12-22 15:32:54 ] INFO Separating transcripts (UTR regions) per gene for 10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs... [ 2016-12-22 15:33:24 ] INFO Separating transcripts (UTR regions) per gene for 11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs... [ 2016-12-22 15:33:49 ] INFO Separating transcripts (UTR regions) per gene for 12_Wt_1_VICs... [ 2016-12-22 15:34:11 ] INFO Separating transcripts (UTR regions) per gene for 13_Wt_2_VICs... [ 2016-12-22 15:34:33 ] INFO Separating transcripts (UTR regions) per gene for 14_Wt_3_VICs... [ 2016-12-22 15:34:58 ] INFO Separating transcripts (UTR regions) per gene for 15_Tg197_1_VICs... [ 2016-12-22 15:35:18 ] INFO Separating transcripts (UTR regions) per gene for 16_Tg197_2_VICs... [ 2016-12-22 15:35:39 ] INFO Separating transcripts (UTR regions) per gene for 17_Tg197_3_VICs... [ 2016-12-22 15:35:59 ] INFO Separating transcripts (UTR regions) per gene for 18_TNF_DeltaARE_1_VICs... [ 2016-12-22 15:36:24 ] INFO Separating transcripts (UTR regions) per gene for 19_TNF_DeltaARE_2_VICs... [ 2016-12-22 15:36:44 ] INFO Separating transcripts (UTR regions) per gene for 20_TNF_DeltaARE_3_VICs... [ 2016-12-22 15:37:04 ] INFO Separating transcripts (UTR regions) per gene for 21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs... [ 2016-12-22 15:37:26 ] INFO Separating transcripts (UTR regions) per gene for 22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs... [ 2016-12-22 15:37:46 ] INFO Separating transcripts (UTR regions) per gene for 23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs... [ 2016-12-22 15:38:08 ] INFO Saving gene model to ~/a/tools/rna/metaseqr/testOut/metaseqr_quantseq_ms_deseq_22122016/data/gene_model.RData [ 2016-12-22 15:38:14 ] INFO Summarizing count data... [ 2016-12-22 15:38:48 ] INFO Removing genes with zero counts in all samples... [ 2016-12-22 15:38:49 ] INFO Normalizing with: deseq [ 2016-12-22 15:38:50 ] INFO Applying gene filter length... [ 2016-12-22 15:38:50 ] INFO Threshold below which ignored: 500 [ 2016-12-22 15:38:50 ] INFO Applying gene filter avg.reads... [ 2016-12-22 15:38:50 ] INFO Threshold below which ignored: 0 [ 2016-12-22 15:38:50 ] INFO Applying gene filter expression... [ 2016-12-22 15:38:50 ] INFO Threshold below which ignored: 2 [ 2016-12-22 15:38:50 ] INFO Applying gene filter biotype... [ 2016-12-22 15:38:50 ] INFO Biotypes ignored: rRNA, IG_V_pseudogene, TR_V_pseudogene [ 2016-12-22 15:38:50 ] INFO 30295 genes filtered out [ 2016-12-22 15:38:50 ] INFO 19253 genes remain after filtering [ 2016-12-22 15:38:50 ] INFO Running statistical tests with: deseq [ 2016-12-22 15:38:51 ] INFO Contrast: group1_vs_group2 [ 2016-12-22 15:39:04 ] INFO Contrast: group1_vs_group3 [ 2016-12-22 15:39:17 ] INFO Contrast: group1_vs_group4 [ 2016-12-22 15:39:29 ] INFO Contrast: group2_vs_group3 [ 2016-12-22 15:39:41 ] INFO Contrast: group3_vs_group4 [ 2016-12-22 15:39:53 ] INFO Contrast: group5_vs_group6 [ 2016-12-22 15:40:12 ] INFO Contrast: group5_vs_group7 [ 2016-12-22 15:40:33 ] INFO Contrast: group5_vs_group8 [ 2016-12-22 15:40:54 ] INFO Contrast: group7_vs_group8 [ 2016-12-22 15:41:14 ] INFO Contrast: group6_vs_group7 [ 2016-12-22 15:41:34 ] INFO Contrast: group1_vs_group5 [ 2016-12-22 15:41:51 ] INFO Contrast: group2_vs_group6 [ 2016-12-22 15:42:07 ] INFO Contrast: group3_vs_group7 [ 2016-12-22 15:42:24 ] INFO Contrast: group4_vs_group8 [ 2016-12-22 15:42:39 ] INFO Contrast group1_vs_group2: found 541 genes [ 2016-12-22 15:42:39 ] INFO Contrast group1_vs_group3: found 364 genes [ 2016-12-22 15:42:39 ] INFO Contrast group1_vs_group4: found 603 genes [ 2016-12-22 15:42:39 ] INFO Contrast group2_vs_group3: found 339 genes [ 2016-12-22 15:42:39 ] INFO Contrast group3_vs_group4: found 766 genes [ 2016-12-22 15:42:39 ] INFO Contrast group5_vs_group6: found 741 genes [ 2016-12-22 15:42:39 ] INFO Contrast group5_vs_group7: found 285 genes [ 2016-12-22 15:42:39 ] INFO Contrast group5_vs_group8: found 425 genes [ 2016-12-22 15:42:39 ] INFO Contrast group7_vs_group8: found 510 genes [ 2016-12-22 15:42:39 ] INFO Contrast group6_vs_group7: found 982 genes [ 2016-12-22 15:42:39 ] INFO Contrast group1_vs_group5: found 1912 genes [ 2016-12-22 15:42:39 ] INFO Contrast group2_vs_group6: found 1447 genes [ 2016-12-22 15:42:39 ] INFO Contrast group3_vs_group7: found 1908 genes [ 2016-12-22 15:42:39 ] INFO Contrast group4_vs_group8: found 2272 genes [ 2016-12-22 15:42:39 ] INFO Exporting and compressing normalized read counts table to ~/a/tools/rna/metaseqr/testOut/metaseqr_quantseq_ms_deseq_22122016/lists/normalized_counts_table.txt [ 2016-12-22 15:42:41 ] INFO Building output files... [ 2016-12-22 15:42:42 ] INFO Contrast: group1_vs_group2 [ 2016-12-22 15:42:42 ] INFO Adding non-filtered data... [ 2016-12-22 15:42:42 ] INFO binding annotation... [ 2016-12-22 15:42:44 ] INFO binding p-values... [ 2016-12-22 15:42:44 ] INFO binding FDRs... [ 2016-12-22 15:42:45 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:42:45 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:42:45 ] INFO binding all normalized counts for group1... [ 2016-12-22 15:42:46 ] INFO binding all normalized counts for group2... [ 2016-12-22 15:42:47 ] INFO binding filtering flags... [ 2016-12-22 15:42:48 ] INFO Writing output... [ 2016-12-22 15:42:48 ] INFO Adding filtered data... [ 2016-12-22 15:42:48 ] INFO binding annotation... [ 2016-12-22 15:42:48 ] INFO binding p-values... [ 2016-12-22 15:42:48 ] INFO binding FDRs... [ 2016-12-22 15:42:48 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:42:48 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:42:48 ] INFO binding all normalized counts for group1... [ 2016-12-22 15:42:48 ] INFO binding all normalized counts for group2... [ 2016-12-22 15:42:48 ] INFO binding filtering flags... [ 2016-12-22 15:42:49 ] INFO Writing output... [ 2016-12-22 15:42:51 ] INFO Contrast: group1_vs_group3 [ 2016-12-22 15:42:51 ] INFO Adding non-filtered data... [ 2016-12-22 15:42:51 ] INFO binding annotation... [ 2016-12-22 15:42:52 ] INFO binding p-values... [ 2016-12-22 15:42:52 ] INFO binding FDRs... [ 2016-12-22 15:42:53 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:42:53 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:42:53 ] INFO binding all normalized counts for group1... [ 2016-12-22 15:42:54 ] INFO binding all normalized counts for group3... [ 2016-12-22 15:42:55 ] INFO binding filtering flags... [ 2016-12-22 15:42:56 ] INFO Writing output... [ 2016-12-22 15:42:56 ] INFO Adding filtered data... [ 2016-12-22 15:42:56 ] INFO binding annotation... [ 2016-12-22 15:42:56 ] INFO binding p-values... [ 2016-12-22 15:42:56 ] INFO binding FDRs... [ 2016-12-22 15:42:57 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:42:57 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:42:57 ] INFO binding all normalized counts for group1... [ 2016-12-22 15:42:57 ] INFO binding all normalized counts for group3... [ 2016-12-22 15:42:57 ] INFO binding filtering flags... [ 2016-12-22 15:42:58 ] INFO Writing output... [ 2016-12-22 15:43:00 ] INFO Contrast: group1_vs_group4 [ 2016-12-22 15:43:00 ] INFO Adding non-filtered data... [ 2016-12-22 15:43:00 ] INFO binding annotation... [ 2016-12-22 15:43:01 ] INFO binding p-values... [ 2016-12-22 15:43:01 ] INFO binding FDRs... [ 2016-12-22 15:43:01 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:01 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:01 ] INFO binding all normalized counts for group1... [ 2016-12-22 15:43:02 ] INFO binding all normalized counts for group4... [ 2016-12-22 15:43:03 ] INFO binding filtering flags... [ 2016-12-22 15:43:04 ] INFO Writing output... [ 2016-12-22 15:43:04 ] INFO Adding filtered data... [ 2016-12-22 15:43:04 ] INFO binding annotation... [ 2016-12-22 15:43:04 ] INFO binding p-values... [ 2016-12-22 15:43:04 ] INFO binding FDRs... [ 2016-12-22 15:43:04 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:04 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:04 ] INFO binding all normalized counts for group1... [ 2016-12-22 15:43:04 ] INFO binding all normalized counts for group4... [ 2016-12-22 15:43:04 ] INFO binding filtering flags... [ 2016-12-22 15:43:05 ] INFO Writing output... [ 2016-12-22 15:43:07 ] INFO Contrast: group2_vs_group3 [ 2016-12-22 15:43:07 ] INFO Adding non-filtered data... [ 2016-12-22 15:43:07 ] INFO binding annotation... [ 2016-12-22 15:43:08 ] INFO binding p-values... [ 2016-12-22 15:43:08 ] INFO binding FDRs... [ 2016-12-22 15:43:09 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:09 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:09 ] INFO binding all normalized counts for group2... [ 2016-12-22 15:43:10 ] INFO binding all normalized counts for group3... [ 2016-12-22 15:43:12 ] INFO binding filtering flags... [ 2016-12-22 15:43:13 ] INFO Writing output... [ 2016-12-22 15:43:13 ] INFO Adding filtered data... [ 2016-12-22 15:43:13 ] INFO binding annotation... [ 2016-12-22 15:43:13 ] INFO binding p-values... [ 2016-12-22 15:43:13 ] INFO binding FDRs... [ 2016-12-22 15:43:13 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:13 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:13 ] INFO binding all normalized counts for group2... [ 2016-12-22 15:43:13 ] INFO binding all normalized counts for group3... [ 2016-12-22 15:43:13 ] INFO binding filtering flags... [ 2016-12-22 15:43:14 ] INFO Writing output... [ 2016-12-22 15:43:16 ] INFO Contrast: group3_vs_group4 [ 2016-12-22 15:43:16 ] INFO Adding non-filtered data... [ 2016-12-22 15:43:16 ] INFO binding annotation... [ 2016-12-22 15:43:17 ] INFO binding p-values... [ 2016-12-22 15:43:17 ] INFO binding FDRs... [ 2016-12-22 15:43:17 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:17 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:18 ] INFO binding all normalized counts for group3... [ 2016-12-22 15:43:18 ] INFO binding all normalized counts for group4... [ 2016-12-22 15:43:19 ] INFO binding filtering flags... [ 2016-12-22 15:43:20 ] INFO Writing output... [ 2016-12-22 15:43:20 ] INFO Adding filtered data... [ 2016-12-22 15:43:20 ] INFO binding annotation... [ 2016-12-22 15:43:20 ] INFO binding p-values... [ 2016-12-22 15:43:20 ] INFO binding FDRs... [ 2016-12-22 15:43:20 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:20 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:20 ] INFO binding all normalized counts for group3... [ 2016-12-22 15:43:20 ] INFO binding all normalized counts for group4... [ 2016-12-22 15:43:20 ] INFO binding filtering flags... [ 2016-12-22 15:43:21 ] INFO Writing output... [ 2016-12-22 15:43:23 ] INFO Contrast: group5_vs_group6 [ 2016-12-22 15:43:23 ] INFO Adding non-filtered data... [ 2016-12-22 15:43:23 ] INFO binding annotation... [ 2016-12-22 15:43:24 ] INFO binding p-values... [ 2016-12-22 15:43:24 ] INFO binding FDRs... [ 2016-12-22 15:43:25 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:25 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:25 ] INFO binding all normalized counts for group5... [ 2016-12-22 15:43:26 ] INFO binding all normalized counts for group6... [ 2016-12-22 15:43:28 ] INFO binding filtering flags... [ 2016-12-22 15:43:29 ] INFO Writing output... [ 2016-12-22 15:43:29 ] INFO Adding filtered data... [ 2016-12-22 15:43:29 ] INFO binding annotation... [ 2016-12-22 15:43:29 ] INFO binding p-values... [ 2016-12-22 15:43:29 ] INFO binding FDRs... [ 2016-12-22 15:43:29 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:29 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:29 ] INFO binding all normalized counts for group5... [ 2016-12-22 15:43:29 ] INFO binding all normalized counts for group6... [ 2016-12-22 15:43:29 ] INFO binding filtering flags... [ 2016-12-22 15:43:30 ] INFO Writing output... [ 2016-12-22 15:43:32 ] INFO Contrast: group5_vs_group7 [ 2016-12-22 15:43:32 ] INFO Adding non-filtered data... [ 2016-12-22 15:43:32 ] INFO binding annotation... [ 2016-12-22 15:43:33 ] INFO binding p-values... [ 2016-12-22 15:43:33 ] INFO binding FDRs... [ 2016-12-22 15:43:33 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:33 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:34 ] INFO binding all normalized counts for group5... [ 2016-12-22 15:43:34 ] INFO binding all normalized counts for group7... [ 2016-12-22 15:43:36 ] INFO binding filtering flags... [ 2016-12-22 15:43:36 ] INFO Writing output... [ 2016-12-22 15:43:36 ] INFO Adding filtered data... [ 2016-12-22 15:43:36 ] INFO binding annotation... [ 2016-12-22 15:43:36 ] INFO binding p-values... [ 2016-12-22 15:43:36 ] INFO binding FDRs... [ 2016-12-22 15:43:37 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:37 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:37 ] INFO binding all normalized counts for group5... [ 2016-12-22 15:43:37 ] INFO binding all normalized counts for group7... [ 2016-12-22 15:43:37 ] INFO binding filtering flags... [ 2016-12-22 15:43:38 ] INFO Writing output... [ 2016-12-22 15:43:40 ] INFO Contrast: group5_vs_group8 [ 2016-12-22 15:43:40 ] INFO Adding non-filtered data... [ 2016-12-22 15:43:40 ] INFO binding annotation... [ 2016-12-22 15:43:41 ] INFO binding p-values... [ 2016-12-22 15:43:41 ] INFO binding FDRs... [ 2016-12-22 15:43:41 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:41 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:42 ] INFO binding all normalized counts for group5... [ 2016-12-22 15:43:43 ] INFO binding all normalized counts for group8... [ 2016-12-22 15:43:44 ] INFO binding filtering flags... [ 2016-12-22 15:43:45 ] INFO Writing output... [ 2016-12-22 15:43:45 ] INFO Adding filtered data... [ 2016-12-22 15:43:45 ] INFO binding annotation... [ 2016-12-22 15:43:45 ] INFO binding p-values... [ 2016-12-22 15:43:45 ] INFO binding FDRs... [ 2016-12-22 15:43:46 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:46 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:46 ] INFO binding all normalized counts for group5... [ 2016-12-22 15:43:46 ] INFO binding all normalized counts for group8... [ 2016-12-22 15:43:46 ] INFO binding filtering flags... [ 2016-12-22 15:43:47 ] INFO Writing output... [ 2016-12-22 15:43:49 ] INFO Contrast: group7_vs_group8 [ 2016-12-22 15:43:49 ] INFO Adding non-filtered data... [ 2016-12-22 15:43:49 ] INFO binding annotation... [ 2016-12-22 15:43:50 ] INFO binding p-values... [ 2016-12-22 15:43:50 ] INFO binding FDRs... [ 2016-12-22 15:43:50 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:51 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:51 ] INFO binding all normalized counts for group7... [ 2016-12-22 15:43:52 ] INFO binding all normalized counts for group8... [ 2016-12-22 15:43:52 ] INFO binding filtering flags... [ 2016-12-22 15:43:53 ] INFO Writing output... [ 2016-12-22 15:43:53 ] INFO Adding filtered data... [ 2016-12-22 15:43:53 ] INFO binding annotation... [ 2016-12-22 15:43:53 ] INFO binding p-values... [ 2016-12-22 15:43:53 ] INFO binding FDRs... [ 2016-12-22 15:43:54 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:54 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:54 ] INFO binding all normalized counts for group7... [ 2016-12-22 15:43:54 ] INFO binding all normalized counts for group8... [ 2016-12-22 15:43:54 ] INFO binding filtering flags... [ 2016-12-22 15:43:55 ] INFO Writing output... [ 2016-12-22 15:43:57 ] INFO Contrast: group6_vs_group7 [ 2016-12-22 15:43:57 ] INFO Adding non-filtered data... [ 2016-12-22 15:43:57 ] INFO binding annotation... [ 2016-12-22 15:43:59 ] INFO binding p-values... [ 2016-12-22 15:43:59 ] INFO binding FDRs... [ 2016-12-22 15:43:59 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:43:59 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:43:59 ] INFO binding all normalized counts for group6... [ 2016-12-22 15:44:00 ] INFO binding all normalized counts for group7... [ 2016-12-22 15:44:01 ] INFO binding filtering flags... [ 2016-12-22 15:44:02 ] INFO Writing output... [ 2016-12-22 15:44:02 ] INFO Adding filtered data... [ 2016-12-22 15:44:02 ] INFO binding annotation... [ 2016-12-22 15:44:02 ] INFO binding p-values... [ 2016-12-22 15:44:02 ] INFO binding FDRs... [ 2016-12-22 15:44:03 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:44:03 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:44:03 ] INFO binding all normalized counts for group6... [ 2016-12-22 15:44:03 ] INFO binding all normalized counts for group7... [ 2016-12-22 15:44:03 ] INFO binding filtering flags... [ 2016-12-22 15:44:04 ] INFO Writing output... [ 2016-12-22 15:44:06 ] INFO Contrast: group1_vs_group5 [ 2016-12-22 15:44:06 ] INFO Adding non-filtered data... [ 2016-12-22 15:44:06 ] INFO binding annotation... [ 2016-12-22 15:44:06 ] INFO binding p-values... [ 2016-12-22 15:44:07 ] INFO binding FDRs... [ 2016-12-22 15:44:07 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:44:07 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:44:07 ] INFO binding all normalized counts for group1... [ 2016-12-22 15:44:08 ] INFO binding all normalized counts for group5... [ 2016-12-22 15:44:09 ] INFO binding filtering flags... [ 2016-12-22 15:44:10 ] INFO Writing output... [ 2016-12-22 15:44:10 ] INFO Adding filtered data... [ 2016-12-22 15:44:10 ] INFO binding annotation... [ 2016-12-22 15:44:10 ] INFO binding p-values... [ 2016-12-22 15:44:10 ] INFO binding FDRs... [ 2016-12-22 15:44:11 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:44:11 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:44:11 ] INFO binding all normalized counts for group1... [ 2016-12-22 15:44:11 ] INFO binding all normalized counts for group5... [ 2016-12-22 15:44:11 ] INFO binding filtering flags... [ 2016-12-22 15:44:12 ] INFO Writing output... [ 2016-12-22 15:44:14 ] INFO Contrast: group2_vs_group6 [ 2016-12-22 15:44:14 ] INFO Adding non-filtered data... [ 2016-12-22 15:44:14 ] INFO binding annotation... [ 2016-12-22 15:44:15 ] INFO binding p-values... [ 2016-12-22 15:44:15 ] INFO binding FDRs... [ 2016-12-22 15:44:15 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:44:15 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:44:15 ] INFO binding all normalized counts for group2... [ 2016-12-22 15:44:16 ] INFO binding all normalized counts for group6... [ 2016-12-22 15:44:18 ] INFO binding filtering flags... [ 2016-12-22 15:44:18 ] INFO Writing output... [ 2016-12-22 15:44:19 ] INFO Adding filtered data... [ 2016-12-22 15:44:19 ] INFO binding annotation... [ 2016-12-22 15:44:19 ] INFO binding p-values... [ 2016-12-22 15:44:19 ] INFO binding FDRs... [ 2016-12-22 15:44:20 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:44:20 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:44:20 ] INFO binding all normalized counts for group2... [ 2016-12-22 15:44:20 ] INFO binding all normalized counts for group6... [ 2016-12-22 15:44:20 ] INFO binding filtering flags... [ 2016-12-22 15:44:21 ] INFO Writing output... [ 2016-12-22 15:44:23 ] INFO Contrast: group3_vs_group7 [ 2016-12-22 15:44:23 ] INFO Adding non-filtered data... [ 2016-12-22 15:44:23 ] INFO binding annotation... [ 2016-12-22 15:44:24 ] INFO binding p-values... [ 2016-12-22 15:44:24 ] INFO binding FDRs... [ 2016-12-22 15:44:24 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:44:24 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:44:25 ] INFO binding all normalized counts for group3... [ 2016-12-22 15:44:25 ] INFO binding all normalized counts for group7... [ 2016-12-22 15:44:26 ] INFO binding filtering flags... [ 2016-12-22 15:44:27 ] INFO Writing output... [ 2016-12-22 15:44:27 ] INFO Adding filtered data... [ 2016-12-22 15:44:27 ] INFO binding annotation... [ 2016-12-22 15:44:27 ] INFO binding p-values... [ 2016-12-22 15:44:27 ] INFO binding FDRs... [ 2016-12-22 15:44:28 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:44:28 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:44:28 ] INFO binding all normalized counts for group3... [ 2016-12-22 15:44:28 ] INFO binding all normalized counts for group7... [ 2016-12-22 15:44:28 ] INFO binding filtering flags... [ 2016-12-22 15:44:30 ] INFO Writing output... [ 2016-12-22 15:44:32 ] INFO Contrast: group4_vs_group8 [ 2016-12-22 15:44:32 ] INFO Adding non-filtered data... [ 2016-12-22 15:44:32 ] INFO binding annotation... [ 2016-12-22 15:44:32 ] INFO binding p-values... [ 2016-12-22 15:44:33 ] INFO binding FDRs... [ 2016-12-22 15:44:33 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:44:33 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:44:33 ] INFO binding all normalized counts for group4... [ 2016-12-22 15:44:34 ] INFO binding all normalized counts for group8... [ 2016-12-22 15:44:35 ] INFO binding filtering flags... [ 2016-12-22 15:44:35 ] INFO Writing output... [ 2016-12-22 15:44:35 ] INFO Adding filtered data... [ 2016-12-22 15:44:35 ] INFO binding annotation... [ 2016-12-22 15:44:35 ] INFO binding p-values... [ 2016-12-22 15:44:35 ] INFO binding FDRs... [ 2016-12-22 15:44:36 ] INFO binding natural normalized fold changes... [ 2016-12-22 15:44:36 ] INFO binding log2 normalized fold changes... [ 2016-12-22 15:44:36 ] INFO binding all normalized counts for group4... [ 2016-12-22 15:44:36 ] INFO binding all normalized counts for group8... [ 2016-12-22 15:44:36 ] INFO binding filtering flags... [ 2016-12-22 15:44:37 ] INFO Writing output... [ 2016-12-22 15:44:39 ] INFO Creating quality control graphs... [ 2016-12-22 15:44:39 ] INFO Plotting in png format... [ 2016-12-22 15:44:39 ] INFO Plotting mds... [ 2016-12-22 15:44:39 ] INFO Plotting biodetection... [ 2016-12-22 15:44:42 ] INFO Plotting countsbio... [ 2016-12-22 15:44:46 ] INFO Plotting saturation... [ 2016-12-22 15:45:07 ] INFO Plotting readnoise... [ 2016-12-22 15:45:20 ] INFO Plotting correl... [ 2016-12-22 15:45:20 ] INFO Plotting pairwise... [ 2016-12-22 15:49:10 ] INFO Plotting boxplot... [ 2016-12-22 15:49:10 ] INFO Plotting gcbias... [ 2016-12-22 15:49:12 ] INFO Plotting lengthbias... [ 2016-12-22 15:49:14 ] INFO Plotting meandiff... [ 2016-12-22 15:49:18 ] INFO Plotting meanvar... [ 2016-12-22 15:49:48 ] INFO Plotting boxplot... [ 2016-12-22 15:49:48 ] INFO Plotting gcbias... [ 2016-12-22 15:49:51 ] INFO Plotting lengthbias... [ 2016-12-22 15:49:53 ] INFO Plotting meandiff... [ 2016-12-22 15:49:56 ] INFO Plotting meanvar... [ 2016-12-22 15:50:29 ] INFO Plotting biodist... [ 2016-12-22 15:50:29 ] INFO Contrast: group1_vs_group2 [ 2016-12-22 15:50:29 ] INFO Contrast: group1_vs_group3 [ 2016-12-22 15:50:29 ] INFO Contrast: group1_vs_group4 [ 2016-12-22 15:50:30 ] INFO Contrast: group2_vs_group3 [ 2016-12-22 15:50:30 ] INFO Contrast: group3_vs_group4 [ 2016-12-22 15:50:30 ] INFO Contrast: group5_vs_group6 [ 2016-12-22 15:50:31 ] INFO Contrast: group5_vs_group7 [ 2016-12-22 15:50:31 ] INFO Contrast: group5_vs_group8 [ 2016-12-22 15:50:31 ] INFO Contrast: group7_vs_group8 [ 2016-12-22 15:50:32 ] INFO Contrast: group6_vs_group7 [ 2016-12-22 15:50:32 ] INFO Contrast: group1_vs_group5 [ 2016-12-22 15:50:32 ] INFO Contrast: group2_vs_group6 [ 2016-12-22 15:50:32 ] INFO Contrast: group3_vs_group7 [ 2016-12-22 15:50:33 ] INFO Contrast: group4_vs_group8 [ 2016-12-22 15:50:33 ] INFO Plotting volcano... [ 2016-12-22 15:50:33 ] INFO Contrast: group1_vs_group2 [ 2016-12-22 15:50:34 ] INFO Contrast: group1_vs_group3 [ 2016-12-22 15:50:34 ] INFO Contrast: group1_vs_group4 [ 2016-12-22 15:50:35 ] INFO Contrast: group2_vs_group3 [ 2016-12-22 15:50:36 ] INFO Contrast: group3_vs_group4 [ 2016-12-22 15:50:36 ] INFO Contrast: group5_vs_group6 [ 2016-12-22 15:50:37 ] INFO Contrast: group5_vs_group7 [ 2016-12-22 15:50:37 ] INFO Contrast: group5_vs_group8 [ 2016-12-22 15:50:38 ] INFO Contrast: group7_vs_group8 [ 2016-12-22 15:50:39 ] INFO Contrast: group6_vs_group7 [ 2016-12-22 15:50:39 ] INFO Contrast: group1_vs_group5 [ 2016-12-22 15:50:40 ] INFO Contrast: group2_vs_group6 [ 2016-12-22 15:50:40 ] INFO Contrast: group3_vs_group7 [ 2016-12-22 15:50:41 ] INFO Contrast: group4_vs_group8 [ 2016-12-22 15:50:42 ] INFO Plotting deheatmap... [ 2016-12-22 15:50:42 ] INFO Contrast: group1_vs_group2 [ 2016-12-22 15:51:32 ] INFO Contrast: group1_vs_group3 [ 2016-12-22 15:52:20 ] INFO Contrast: group1_vs_group4 [ 2016-12-22 15:53:07 ] INFO Contrast: group2_vs_group3 [ 2016-12-22 15:53:54 ] INFO Contrast: group3_vs_group4 [ 2016-12-22 15:54:42 ] INFO Contrast: group5_vs_group6 [ 2016-12-22 15:55:30 ] INFO Contrast: group5_vs_group7 [ 2016-12-22 15:56:18 ] INFO Contrast: group5_vs_group8 [ 2016-12-22 15:57:06 ] INFO Contrast: group7_vs_group8 [ 2016-12-22 15:57:54 ] INFO Contrast: group6_vs_group7 [ 2016-12-22 15:58:42 ] INFO Contrast: group1_vs_group5 [ 2016-12-22 15:59:30 ] INFO Contrast: group2_vs_group6 [ 2016-12-22 16:00:18 ] INFO Contrast: group3_vs_group7 [ 2016-12-22 16:01:06 ] INFO Contrast: group4_vs_group8 [ 2016-12-22 16:01:53 ] INFO Plotting filtered... [ 2016-12-22 16:01:53 ] INFO Creating HTML report... [ 2016-12-22 16:01:53 ] INFO Compressing figures...
Multidimensional scaling
Biotype detection
Biotype detection counts
Read and biotype saturation
RNA-Seq reads noise
Correlation plots
Pairwise scatterplots
Boxplots
GC content bias
Gene/transcript length bias
Mean-difference
Mean-variance
Chromosome and biotype distribution of filtered genes
Volcano plots
DEG heatmaps
Chromosome and biotype distributions of DEGs
Results
DEG table for the contrast group1_vs_group2The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group1_vs_group2. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group1_vs_group2 | log2_normalized_fold_change_group1_vs_group2 | natural_normalized_counts_1_Wt_1_SFs | natural_normalized_counts_2_Wt_2_SFs | natural_normalized_counts_3_Wt_3_SFs | log2_normalized_counts_1_Wt_1_SFs | log2_normalized_counts_2_Wt_2_SFs | log2_normalized_counts_3_Wt_3_SFs | rpgm_normalized_counts_1_Wt_1_SFs | rpgm_normalized_counts_2_Wt_2_SFs | rpgm_normalized_counts_3_Wt_3_SFs | natural_normalized_counts_4_Tg197_1_SFs | natural_normalized_counts_5_Tg197_2_SFs | natural_normalized_counts_6_Tg197_3_SFs | log2_normalized_counts_4_Tg197_1_SFs | log2_normalized_counts_5_Tg197_2_SFs | log2_normalized_counts_6_Tg197_3_SFs | rpgm_normalized_counts_4_Tg197_1_SFs | rpgm_normalized_counts_5_Tg197_2_SFs | rpgm_normalized_counts_6_Tg197_3_SFs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr2 | 164940780 | 164955850 | ENSMUSG00000017737 | 0.5213 | + | Mmp9 | protein_coding | 1.38e-09 | 1.99e-05 | 13.0595 | 3.707025 | 3.10e+02 | 4.01e+02 | 9.30e+01 | 8.28e+00 | 8.65e+00 | 6.55e+00 | 6.59e-02 | 8.52e-02 | 1.98e-02 | 6.86e+03 | 1.99e+03 | 1.69e+03 | 1.27e+01 | 1.10e+01 | 1.07e+01 | 1.46e+00 | 4.22e-01 | 3.58e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 103460375 | 103483217 | ENSMUSG00000086503 | 0.4122 | - | Xist | lincRNA | 2.06e-09 | 1.99e-05 | 0.0184 | -5.763766 | 0.00e+00 | 5.80e+01 | 1.02e+02 | 0.00e+00 | 5.88e+00 | 6.69e+00 | 0.00e+00 | 2.20e-02 | 3.87e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 90772435 | 90773383 | ENSMUSG00000029373 | 0.5195 | + | Pf4 | protein_coding | 1.03e-08 | 6.61e-05 | 14.4040 | 3.848402 | 1.80e+01 | 5.50e+01 | 2.30e+01 | 4.25e+00 | 5.81e+00 | 4.58e+00 | 1.13e-02 | 3.46e-02 | 1.45e-02 | 6.46e+02 | 3.57e+02 | 4.20e+02 | 9.34e+00 | 8.48e+00 | 8.72e+00 | 4.07e-01 | 2.25e-01 | 2.64e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 22126727 | 22135711 | ENSMUSG00000001348 | 0.5233 | - | Acp5 | protein_coding | 1.76e-08 | 8.47e-05 | 11.1465 | 3.478514 | 1.05e+02 | 6.80e+01 | 2.20e+01 | 6.73e+00 | 6.11e+00 | 4.52e+00 | 3.75e-02 | 2.43e-02 | 7.85e-03 | 1.16e+03 | 4.18e+02 | 6.29e+02 | 1.02e+01 | 8.71e+00 | 9.30e+00 | 4.13e-01 | 1.49e-01 | 2.25e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 129342691 | 129365303 | ENSMUSG00000053063 | 0.3896 | + | Clec12a | protein_coding | 3.42e-08 | 1.32e-04 | 19.4211 | 4.279549 | 1.60e+01 | 1.20e+01 | 7.00e+00 | 4.09e+00 | 3.70e+00 | 3.00e+00 | 3.20e-03 | 2.40e-03 | 1.40e-03 | 9.80e+01 | 2.20e+01 | 6.15e+02 | 6.63e+00 | 4.52e+00 | 9.27e+00 | 1.96e-02 | 4.40e-03 | 1.23e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83662584 | 83664683 | ENSMUSG00000018930 | 0.4457 | + | Ccl4 | protein_coding | 5.98e-08 | 1.92e-04 | 12.2954 | 3.620042 | 3.70e+01 | 1.63e+02 | 3.40e+01 | 5.25e+00 | 7.36e+00 | 5.13e+00 | 2.38e-02 | 1.05e-01 | 2.19e-02 | 4.30e+02 | 1.53e+02 | 2.33e+03 | 8.75e+00 | 7.27e+00 | 1.12e+01 | 2.76e-01 | 9.83e-02 | 1.50e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 75131101 | 75230842 | ENSMUSG00000021998 | 0.4291 | + | Lcp1 | protein_coding | 3.03e-07 | 8.32e-04 | 10.4342 | 3.383243 | 6.00e+01 | 1.46e+02 | 7.20e+01 | 5.93e+00 | 7.20e+00 | 6.19e+00 | 6.55e-03 | 1.59e-02 | 7.86e-03 | 4.54e+02 | 2.07e+02 | 2.27e+03 | 8.83e+00 | 7.70e+00 | 1.11e+01 | 4.95e-02 | 2.26e-02 | 2.47e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 134220053 | 134229625 | ENSMUSG00000015950 | 0.5368 | - | Ncf1 | protein_coding | 3.52e-07 | 8.32e-04 | 14.3429 | 3.842261 | 6.00e+00 | 4.20e+01 | 1.90e+01 | 2.81e+00 | 5.43e+00 | 4.32e+00 | 1.06e-03 | 7.42e-03 | 3.36e-03 | 1.24e+02 | 6.30e+01 | 8.14e+02 | 6.97e+00 | 6.00e+00 | 9.67e+00 | 2.19e-02 | 1.11e-02 | 1.44e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 165393760 | 165400405 | ENSMUSG00000027670 | 0.5232 | - | Ocstamp | protein_coding | 3.89e-07 | 8.32e-04 | 37.8889 | 5.243703 | 3.00e+00 | 2.00e+00 | 1.00e+00 | 2.00e+00 | 1.58e+00 | 1.00e+00 | 8.98e-04 | 5.99e-04 | 2.99e-04 | 3.40e+01 | 2.00e+01 | 2.84e+02 | 5.13e+00 | 4.39e+00 | 8.15e+00 | 1.02e-02 | 5.99e-03 | 8.50e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 17876471 | 17883940 | ENSMUSG00000045551 | 0.4003 | - | Fpr1 | protein_coding | 6.26e-07 | 1.21e-03 | 14.7966 | 3.887195 | 1.60e+01 | 2.90e+01 | 1.10e+01 | 4.09e+00 | 4.91e+00 | 3.58e+00 | 1.13e-02 | 2.05e-02 | 7.78e-03 | 6.20e+01 | 5.40e+01 | 7.54e+02 | 5.98e+00 | 5.78e+00 | 9.56e+00 | 4.38e-02 | 3.82e-02 | 5.33e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 129364570 | 129371139 | ENSMUSG00000027398 | 0.4534 | - | Il1b | protein_coding | 7.92e-07 | 1.39e-03 | 22.6250 | 4.499846 | 0.00e+00 | 4.00e+00 | 1.00e+00 | 0.00e+00 | 2.32e+00 | 1.00e+00 | 0.00e+00 | 1.31e-03 | 3.27e-04 | 6.80e+01 | 8.70e+01 | 2.30e+01 | 6.11e+00 | 6.46e+00 | 4.58e+00 | 2.22e-02 | 2.84e-02 | 7.52e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36184212 | 36188111 | ENSMUSG00000079597 | 0.3918 | + | Gm5483 | protein_coding | 1.36e-06 | 2.18e-03 | 15.6429 | 3.967432 | 7.00e+00 | 2.80e+01 | 4.00e+00 | 3.00e+00 | 4.86e+00 | 2.32e+00 | 5.28e-03 | 2.11e-02 | 3.02e-03 | 3.55e+02 | 2.14e+02 | 8.50e+01 | 8.48e+00 | 7.75e+00 | 6.43e+00 | 2.68e-01 | 1.61e-01 | 6.41e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 173962568 | 173982744 | ENSMUSG00000026535 | 0.3715 | - | Ifi202b | protein_coding | 1.99e-06 | 2.94e-03 | 37.2500 | 5.219169 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 6.72e-04 | 7.80e+01 | 6.80e+01 | 0.00e+00 | 6.30e+00 | 6.11e+00 | 0.00e+00 | 5.24e-02 | 4.57e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 74375195 | 74386062 | ENSMUSG00000026177 | 0.5207 | + | Slc11a1 | protein_coding | 2.85e-06 | 3.86e-03 | 10.8065 | 3.433821 | 1.80e+01 | 3.60e+01 | 5.00e+00 | 4.25e+00 | 5.21e+00 | 2.58e+00 | 1.93e-03 | 3.86e-03 | 5.36e-04 | 4.50e+01 | 2.50e+01 | 5.97e+02 | 5.52e+00 | 4.70e+00 | 9.22e+00 | 4.82e-03 | 2.68e-03 | 6.40e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127132232 | 127137823 | ENSMUSG00000051457 | 0.5097 | - | Spn | protein_coding | 3.01e-06 | 3.86e-03 | 11.5143 | 3.525353 | 1.30e+01 | 1.20e+01 | 7.00e+00 | 3.81e+00 | 3.70e+00 | 3.00e+00 | 2.27e-03 | 2.10e-03 | 1.22e-03 | 2.30e+01 | 2.00e+01 | 3.57e+02 | 4.58e+00 | 4.39e+00 | 8.48e+00 | 4.02e-03 | 3.50e-03 | 6.24e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36450537 | 36455392 | ENSMUSG00000054905 | 0.4016 | - | Stfa3 | protein_coding | 3.93e-06 | 4.73e-03 | 8.8623 | 3.147684 | 1.90e+01 | 9.40e+01 | 2.20e+01 | 4.32e+00 | 6.57e+00 | 4.52e+00 | 1.43e-02 | 7.09e-02 | 1.66e-02 | 8.81e+02 | 2.48e+02 | 9.10e+01 | 9.78e+00 | 7.96e+00 | 6.52e+00 | 6.64e-01 | 1.87e-01 | 6.86e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 7558456 | 7568485 | ENSMUSG00000005800 | 0.4099 | + | Mmp8 | protein_coding | 4.35e-06 | 4.93e-03 | 11.2188 | 3.487840 | 6.00e+00 | 6.00e+00 | 1.70e+01 | 2.81e+00 | 2.81e+00 | 4.17e+00 | 2.73e-03 | 2.73e-03 | 7.72e-03 | 1.66e+02 | 1.73e+02 | 1.70e+01 | 7.38e+00 | 7.44e+00 | 4.17e+00 | 7.54e-02 | 7.86e-02 | 7.72e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 24915208 | 24927470 | ENSMUSG00000019987 | 0.4364 | - | Arg1 | protein_coding | 4.80e-06 | 5.14e-03 | 29.0000 | 4.857981 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 2.70e+01 | 5.60e+01 | 1.00e+00 | 4.81e+00 | 5.83e+00 | 1.00e+00 | 1.63e-02 | 3.38e-02 | 6.04e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 50030124 | 50030735 | ENSMUSG00000062083 | 0.5376 | - | Rpl13a-ps1 | protein_coding | 6.87e-06 | 6.96e-03 | 8.3910 | 3.068839 | 5.20e+01 | 3.00e+01 | 4.80e+01 | 5.73e+00 | 4.95e+00 | 5.61e+00 | 4.15e-02 | 2.39e-02 | 3.83e-02 | 5.90e+01 | 8.80e+01 | 9.66e+02 | 5.91e+00 | 6.48e+00 | 9.92e+00 | 4.70e-02 | 7.02e-02 | 7.70e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 54764748 | 54773110 | ENSMUSG00000032291 | 0.4814 | + | Crabp1 | protein_coding | 7.23e-06 | 6.96e-03 | 7.1361 | 2.835141 | 5.70e+01 | 4.80e+01 | 8.30e+01 | 5.86e+00 | 5.61e+00 | 6.39e+00 | 3.83e-02 | 3.23e-02 | 5.58e-02 | 6.71e+02 | 3.92e+02 | 2.97e+02 | 9.39e+00 | 8.62e+00 | 8.22e+00 | 4.51e-01 | 2.63e-01 | 2.00e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 35170991 | 35176068 | ENSMUSG00000024397 | 0.5228 | - | Aif1 | protein_coding | 7.98e-06 | 7.31e-03 | 7.2000 | 2.847997 | 4.80e+01 | 6.40e+01 | 5.00e+00 | 5.61e+00 | 6.02e+00 | 2.58e+00 | 1.24e-02 | 1.65e-02 | 1.29e-03 | 4.40e+01 | 3.70e+01 | 7.80e+02 | 5.49e+00 | 5.25e+00 | 9.61e+00 | 1.13e-02 | 9.54e-03 | 2.01e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 109452823 | 109463336 | ENSMUSG00000040856 | 0.5354 | + | Dlk1 | protein_coding | 8.45e-06 | 7.40e-03 | 0.0996 | -3.327865 | 2.83e+02 | 8.40e+01 | 6.04e+02 | 8.15e+00 | 6.41e+00 | 9.24e+00 | 4.20e-02 | 1.25e-02 | 8.96e-02 | 5.50e+01 | 2.70e+01 | 1.20e+01 | 5.81e+00 | 4.81e+00 | 3.70e+00 | 8.16e-03 | 4.01e-03 | 1.78e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 78559169 | 78572783 | ENSMUSG00000033220 | 0.5340 | - | Rac2 | protein_coding | 9.46e-06 | 7.92e-03 | 7.2869 | 2.865309 | 4.90e+01 | 1.62e+02 | 2.30e+01 | 5.64e+00 | 7.35e+00 | 4.58e+00 | 1.07e-02 | 3.54e-02 | 5.03e-03 | 3.40e+02 | 9.70e+01 | 1.29e+03 | 8.41e+00 | 6.61e+00 | 1.03e+01 | 7.44e-02 | 2.12e-02 | 2.81e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83647844 | 83649355 | ENSMUSG00000000982 | 0.4630 | - | Ccl3 | protein_coding | 1.02e-05 | 8.20e-03 | 8.4558 | 3.079938 | 2.10e+01 | 1.03e+02 | 2.00e+01 | 4.46e+00 | 6.70e+00 | 4.39e+00 | 1.26e-02 | 6.19e-02 | 1.20e-02 | 1.60e+02 | 1.41e+02 | 9.39e+02 | 7.33e+00 | 7.15e+00 | 9.88e+00 | 9.62e-02 | 8.48e-02 | 5.65e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36934983 | 36963212 | ENSMUSG00000022831 | 0.4295 | + | Hcls1 | protein_coding | 1.09e-05 | 8.36e-03 | 9.1129 | 3.187911 | 1.20e+01 | 2.70e+01 | 2.00e+01 | 3.70e+00 | 4.81e+00 | 4.39e+00 | 1.55e-03 | 3.50e-03 | 2.59e-03 | 1.09e+02 | 5.10e+01 | 4.02e+02 | 6.78e+00 | 5.70e+00 | 8.65e+00 | 1.41e-02 | 6.60e-03 | 5.20e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 34579846 | 34597468 | ENSMUSG00000049357 | 0.4290 | - | 4933408B17Rik | protein_coding | 2.53e-05 | 1.88e-02 | 23.2857 | 4.541373 | 1.00e+00 | 1.00e+00 | 2.00e+00 | 1.00e+00 | 1.00e+00 | 1.58e+00 | 2.61e-04 | 2.61e-04 | 5.21e-04 | 1.43e+02 | 3.00e+00 | 1.40e+01 | 7.17e+00 | 2.00e+00 | 3.91e+00 | 3.73e-02 | 7.82e-04 | 3.65e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 98422961 | 98446575 | ENSMUSG00000046402 | 0.4941 | + | Rbp1 | protein_coding | 2.75e-05 | 1.91e-02 | 5.9575 | 2.574709 | 1.44e+02 | 1.19e+02 | 8.70e+01 | 7.18e+00 | 6.91e+00 | 6.46e+00 | 9.73e-02 | 8.04e-02 | 5.88e-02 | 8.53e+02 | 1.01e+03 | 2.37e+02 | 9.74e+00 | 9.98e+00 | 7.89e+00 | 5.76e-01 | 6.82e-01 | 1.60e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 171229572 | 171234365 | ENSMUSG00000058715 | 0.4864 | - | Fcer1g | protein_coding | 2.85e-05 | 1.91e-02 | 6.3444 | 2.665483 | 6.90e+01 | 1.31e+02 | 3.80e+01 | 6.13e+00 | 7.04e+00 | 5.29e+00 | 2.42e-02 | 4.59e-02 | 1.33e-02 | 3.26e+02 | 1.54e+02 | 1.05e+03 | 8.35e+00 | 7.28e+00 | 1.00e+01 | 1.14e-01 | 5.39e-02 | 3.66e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group1_vs_group2.Download the whole result list for group1_vs_group2.DEG table for the contrast group1_vs_group3The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group1_vs_group3. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group1_vs_group3 | log2_normalized_fold_change_group1_vs_group3 | natural_normalized_counts_1_Wt_1_SFs | natural_normalized_counts_2_Wt_2_SFs | natural_normalized_counts_3_Wt_3_SFs | log2_normalized_counts_1_Wt_1_SFs | log2_normalized_counts_2_Wt_2_SFs | log2_normalized_counts_3_Wt_3_SFs | rpgm_normalized_counts_1_Wt_1_SFs | rpgm_normalized_counts_2_Wt_2_SFs | rpgm_normalized_counts_3_Wt_3_SFs | natural_normalized_counts_7_TNF_DeltaARE_1_SFs | natural_normalized_counts_8_TNF_DeltaARE_2_SFs | natural_normalized_counts_9_TNF_DeltaARE_3_SFs | log2_normalized_counts_7_TNF_DeltaARE_1_SFs | log2_normalized_counts_8_TNF_DeltaARE_2_SFs | log2_normalized_counts_9_TNF_DeltaARE_3_SFs | rpgm_normalized_counts_7_TNF_DeltaARE_1_SFs | rpgm_normalized_counts_8_TNF_DeltaARE_2_SFs | rpgm_normalized_counts_9_TNF_DeltaARE_3_SFs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr2 | 129364570 | 129371139 | ENSMUSG00000027398 | 0.4534 | - | Il1b | protein_coding | 4.26e-08 | 0.000300 | 37.5000 | 5.228819 | 0.00e+00 | 4.00e+00 | 1.00e+00 | 0.00e+00 | 2.32e+00 | 1.00e+00 | 0.00e+00 | 1.31e-03 | 3.27e-04 | 2.17e+02 | 7.50e+01 | 5.00e+00 | 7.77e+00 | 6.25e+00 | 2.58e+00 | 7.09e-02 | 2.45e-02 | 1.63e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 87357881 | 87371073 | ENSMUSG00000015854 | 0.4301 | + | Cd5l | protein_coding | 4.86e-08 | 0.000300 | 0.0231 | -5.432959 | 6.30e+01 | 3.58e+02 | 8.00e+00 | 6.00e+00 | 8.49e+00 | 3.17e+00 | 2.99e-02 | 1.70e-01 | 3.79e-03 | 0.00e+00 | 7.00e+00 | 0.00e+00 | 0.00e+00 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 3.32e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 70373558 | 70382066 | ENSMUSG00000031849 | 0.5643 | + | Comp | protein_coding | 8.42e-08 | 0.000300 | 0.0965 | -3.373141 | 2.08e+03 | 1.50e+03 | 2.21e+03 | 1.10e+01 | 1.05e+01 | 1.11e+01 | 3.36e-01 | 2.42e-01 | 3.57e-01 | 9.30e+01 | 7.90e+01 | 3.84e+02 | 6.55e+00 | 6.32e+00 | 8.59e+00 | 1.50e-02 | 1.28e-02 | 6.20e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 90772435 | 90773383 | ENSMUSG00000029373 | 0.5195 | + | Pf4 | protein_coding | 8.48e-08 | 0.000300 | 14.0000 | 3.807355 | 1.80e+01 | 5.50e+01 | 2.30e+01 | 4.25e+00 | 5.81e+00 | 4.58e+00 | 1.13e-02 | 3.46e-02 | 1.45e-02 | 1.04e+03 | 3.22e+02 | 2.60e+01 | 1.00e+01 | 8.34e+00 | 4.75e+00 | 6.51e-01 | 2.03e-01 | 1.64e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 7558456 | 7568485 | ENSMUSG00000005800 | 0.4099 | + | Mmp8 | protein_coding | 8.52e-08 | 0.000300 | 19.4688 | 4.283088 | 6.00e+00 | 6.00e+00 | 1.70e+01 | 2.81e+00 | 2.81e+00 | 4.17e+00 | 2.73e-03 | 2.73e-03 | 7.72e-03 | 4.11e+02 | 2.02e+02 | 7.00e+00 | 8.69e+00 | 7.67e+00 | 3.00e+00 | 1.87e-01 | 9.18e-02 | 3.18e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 24915208 | 24927470 | ENSMUSG00000019987 | 0.4364 | - | Arg1 | protein_coding | 9.35e-08 | 0.000300 | 70.3333 | 6.136137 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 1.85e+02 | 2.20e+01 | 1.00e+00 | 7.54e+00 | 4.52e+00 | 1.00e+00 | 1.12e-01 | 1.33e-02 | 6.04e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 134702593 | 134747323 | ENSMUSG00000029675 | 0.4978 | - | Eln | protein_coding | 1.24e-07 | 0.000341 | 0.0909 | -3.459432 | 3.25e+02 | 1.06e+02 | 6.33e+02 | 8.35e+00 | 6.74e+00 | 9.31e+00 | 1.94e-02 | 6.33e-03 | 3.78e-02 | 1.20e+01 | 1.60e+01 | 6.60e+01 | 3.70e+00 | 4.09e+00 | 6.07e+00 | 7.17e-04 | 9.56e-04 | 3.94e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 165405028 | 165473230 | ENSMUSG00000018459 | 0.5038 | - | Slc13a3 | protein_coding | 6.19e-07 | 0.001489 | 0.0950 | -3.396475 | 1.14e+02 | 5.61e+02 | 1.70e+01 | 6.85e+00 | 9.13e+00 | 4.17e+00 | 2.10e-02 | 1.03e-01 | 3.13e-03 | 2.50e+01 | 2.50e+01 | 1.30e+01 | 4.70e+00 | 4.70e+00 | 3.81e+00 | 4.60e-03 | 4.60e-03 | 2.39e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 109452823 | 109463336 | ENSMUSG00000040856 | 0.5354 | + | Dlk1 | protein_coding | 1.67e-06 | 0.003345 | 0.0945 | -3.404216 | 2.83e+02 | 8.40e+01 | 6.04e+02 | 8.15e+00 | 6.41e+00 | 9.24e+00 | 4.20e-02 | 1.25e-02 | 8.96e-02 | 1.60e+01 | 5.00e+00 | 6.80e+01 | 4.09e+00 | 2.58e+00 | 6.11e+00 | 2.37e-03 | 7.42e-04 | 1.01e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 81026808 | 81186414 | ENSMUSG00000021136 | 0.4542 | + | Smoc1 | protein_coding | 1.74e-06 | 0.003345 | 0.0943 | -3.405992 | 2.79e+02 | 1.14e+02 | 8.10e+01 | 8.13e+00 | 6.85e+00 | 6.36e+00 | 8.99e-02 | 3.67e-02 | 2.61e-02 | 1.20e+01 | 1.60e+01 | 1.40e+01 | 3.70e+00 | 4.09e+00 | 3.91e+00 | 3.87e-03 | 5.16e-03 | 4.51e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 65968483 | 65981548 | ENSMUSG00000022037 | 0.5061 | + | Clu | protein_coding | 4.10e-06 | 0.007183 | 0.1433 | -2.803239 | 4.70e+02 | 1.10e+03 | 8.80e+02 | 8.88e+00 | 1.01e+01 | 9.78e+00 | 6.82e-02 | 1.59e-01 | 1.28e-01 | 1.35e+02 | 1.19e+02 | 9.40e+01 | 7.09e+00 | 6.91e+00 | 6.57e+00 | 1.96e-02 | 1.73e-02 | 1.36e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83587882 | 83593087 | ENSMUSG00000018927 | 0.4368 | - | Ccl6 | protein_coding | 8.46e-06 | 0.013213 | 7.8100 | 2.965323 | 3.60e+01 | 2.37e+02 | 1.24e+02 | 5.21e+00 | 7.89e+00 | 6.97e+00 | 1.04e-02 | 6.87e-02 | 3.59e-02 | 1.92e+03 | 1.14e+03 | 5.90e+01 | 1.09e+01 | 1.02e+01 | 5.91e+00 | 5.57e-01 | 3.30e-01 | 1.71e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 19696109 | 19699188 | ENSMUSG00000002985 | 0.5464 | - | Apoe | protein_coding | 8.92e-06 | 0.013213 | 0.1395 | -2.841302 | 3.25e+02 | 3.67e+02 | 4.66e+02 | 8.35e+00 | 8.52e+00 | 8.87e+00 | 9.34e-02 | 1.06e-01 | 1.34e-01 | 4.00e+01 | 7.20e+01 | 4.70e+01 | 5.36e+00 | 6.19e+00 | 5.58e+00 | 1.15e-02 | 2.07e-02 | 1.35e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 166523007 | 166585720 | ENSMUSG00000000402 | 0.4254 | - | Egfl6 | protein_coding | 1.19e-05 | 0.016421 | 0.0803 | -3.638074 | 1.59e+02 | 8.70e+01 | 2.49e+02 | 7.32e+00 | 6.46e+00 | 7.97e+00 | 7.54e-02 | 4.13e-02 | 1.18e-01 | 6.00e+00 | 3.00e+00 | 2.80e+01 | 2.81e+00 | 2.00e+00 | 4.86e+00 | 2.85e-03 | 1.42e-03 | 1.33e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 56119680 | 56121946 | ENSMUSG00000037095 | 0.5880 | - | Lrg1 | protein_coding | 3.64e-05 | 0.046728 | 0.0644 | -3.957296 | 6.70e+01 | 7.20e+01 | 9.10e+01 | 6.09e+00 | 6.19e+00 | 6.52e+00 | 4.42e-02 | 4.75e-02 | 6.00e-02 | 3.00e+00 | 7.00e+00 | 2.00e+00 | 2.00e+00 | 3.00e+00 | 1.58e+00 | 1.98e-03 | 4.62e-03 | 1.32e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 121489824 | 121495694 | ENSMUSG00000032532 | 0.4916 | - | Cck | protein_coding | 4.34e-05 | 0.051613 | 9.5077 | 3.249095 | 1.50e+01 | 1.30e+01 | 3.40e+01 | 4.00e+00 | 3.81e+00 | 5.13e+00 | 5.34e-03 | 4.63e-03 | 1.21e-02 | 2.17e+02 | 1.44e+02 | 2.54e+02 | 7.77e+00 | 7.18e+00 | 7.99e+00 | 7.72e-02 | 5.12e-02 | 9.04e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 83766321 | 83774316 | ENSMUSG00000027996 | 0.4816 | + | Sfrp2 | protein_coding | 4.56e-05 | 0.051613 | 0.1716 | -2.542608 | 3.84e+03 | 3.87e+03 | 3.10e+03 | 1.19e+01 | 1.19e+01 | 1.16e+01 | 8.25e-01 | 8.31e-01 | 6.65e-01 | 1.18e+02 | 1.83e+02 | 1.55e+03 | 6.89e+00 | 7.52e+00 | 1.06e+01 | 2.53e-02 | 3.93e-02 | 3.33e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 93235841 | 93301065 | ENSMUSG00000047793 | 0.4874 | + | Sned1 | protein_coding | 4.92e-05 | 0.052649 | 0.1813 | -2.463186 | 8.15e+02 | 1.19e+03 | 1.45e+03 | 9.67e+00 | 1.02e+01 | 1.05e+01 | 8.31e-02 | 1.22e-01 | 1.48e-01 | 1.00e+02 | 1.88e+02 | 3.37e+02 | 6.66e+00 | 7.56e+00 | 8.40e+00 | 1.02e-02 | 1.92e-02 | 3.44e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164777161 | 164779967 | ENSMUSG00000017300 | 0.5426 | - | Tnnc2 | protein_coding | 5.24e-05 | 0.053069 | 0.1236 | -3.016488 | 1.05e+02 | 5.23e+02 | 7.30e+01 | 6.73e+00 | 9.03e+00 | 6.21e+00 | 3.96e-02 | 1.97e-01 | 2.76e-02 | 2.40e+01 | 3.60e+01 | 2.40e+01 | 4.64e+00 | 5.21e+00 | 4.64e+00 | 9.06e-03 | 1.36e-02 | 9.06e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group1_vs_group3.Download the whole result list for group1_vs_group3.DEG table for the contrast group1_vs_group4The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group1_vs_group4. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group1_vs_group4 | log2_normalized_fold_change_group1_vs_group4 | natural_normalized_counts_1_Wt_1_SFs | natural_normalized_counts_2_Wt_2_SFs | natural_normalized_counts_3_Wt_3_SFs | log2_normalized_counts_1_Wt_1_SFs | log2_normalized_counts_2_Wt_2_SFs | log2_normalized_counts_3_Wt_3_SFs | rpgm_normalized_counts_1_Wt_1_SFs | rpgm_normalized_counts_2_Wt_2_SFs | rpgm_normalized_counts_3_Wt_3_SFs | natural_normalized_counts_10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs | natural_normalized_counts_11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs | log2_normalized_counts_10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs | log2_normalized_counts_11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs | rpgm_normalized_counts_10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs | rpgm_normalized_counts_11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr15 | 101266846 | 101274792 | ENSMUSG00000023034 | 0.5561 | + | Nr4a1 | protein_coding | 1.77e-08 | 0.000219 | 14.3601 | 3.843995 | 1.11e+02 | 1.16e+02 | 1.31e+02 | 6.81e+00 | 6.87e+00 | 7.04e+00 | 6.19e-02 | 6.47e-02 | 7.30e-02 | 1.55e+03 | 1.90e+03 | 1.06e+01 | 1.09e+01 | 8.64e-01 | 1.06e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 165405028 | 165473230 | ENSMUSG00000018459 | 0.5038 | - | Slc13a3 | protein_coding | 2.27e-08 | 0.000219 | 0.0345 | -4.855907 | 1.14e+02 | 5.61e+02 | 1.70e+01 | 6.85e+00 | 9.13e+00 | 4.17e+00 | 2.10e-02 | 1.03e-01 | 3.13e-03 | 1.40e+01 | 0.00e+00 | 3.91e+00 | 0.00e+00 | 2.57e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 120474538 | 120505024 | ENSMUSG00000026390 | 0.4694 | - | Marco | protein_coding | 8.83e-08 | 0.000566 | 0.0492 | -4.345775 | 2.73e+02 | 5.18e+02 | 6.00e+01 | 8.10e+00 | 9.02e+00 | 5.93e+00 | 1.04e-01 | 1.97e-01 | 2.28e-02 | 2.30e+01 | 3.00e+00 | 4.58e+00 | 2.00e+00 | 8.75e-03 | 1.14e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 87357881 | 87371073 | ENSMUSG00000015854 | 0.4301 | + | Cd5l | protein_coding | 4.89e-07 | 0.002353 | 0.0139 | -6.169925 | 6.30e+01 | 3.58e+02 | 8.00e+00 | 6.00e+00 | 8.49e+00 | 3.17e+00 | 2.99e-02 | 1.70e-01 | 3.79e-03 | 2.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 9.48e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 103460375 | 103483217 | ENSMUSG00000086503 | 0.4122 | - | Xist | lincRNA | 1.45e-06 | 0.005572 | 0.0184 | -5.763766 | 0.00e+00 | 5.80e+01 | 1.02e+02 | 0.00e+00 | 5.88e+00 | 6.69e+00 | 0.00e+00 | 2.20e-02 | 3.87e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 26786633 | 26787634 | ENSMUSG00000069939 | 0.5509 | + | Gm12070 | processed_pseudogene | 2.78e-06 | 0.008935 | 10.4670 | 3.387777 | 2.55e+02 | 1.90e+02 | 2.34e+02 | 8.00e+00 | 7.58e+00 | 7.88e+00 | 2.03e-01 | 1.52e-01 | 1.87e-01 | 3.92e+03 | 8.41e+02 | 1.19e+01 | 9.72e+00 | 3.12e+00 | 6.71e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 98422961 | 98446575 | ENSMUSG00000046402 | 0.4941 | + | Rbp1 | protein_coding | 3.33e-05 | 0.091586 | 8.0779 | 3.013981 | 1.44e+02 | 1.19e+02 | 8.70e+01 | 7.18e+00 | 6.91e+00 | 6.46e+00 | 9.73e-02 | 8.04e-02 | 5.88e-02 | 1.60e+03 | 2.98e+02 | 1.06e+01 | 8.22e+00 | 1.08e+00 | 2.01e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83291699 | 83294632 | ENSMUSG00000093483 | 0.4277 | + | AA465934 | processed_transcript | 4.86e-05 | 0.105738 | 0.0523 | -4.257388 | 4.03e+02 | 3.10e+01 | 2.20e+01 | 8.66e+00 | 5.00e+00 | 4.52e+00 | 1.60e-01 | 1.23e-02 | 8.76e-03 | 5.00e+00 | 9.00e+00 | 2.58e+00 | 3.32e+00 | 1.99e-03 | 3.58e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 108012255 | 108017973 | ENSMUSG00000058135 | 0.5130 | - | Gstm1 | protein_coding | 5.32e-05 | 0.105738 | 6.9268 | 2.792197 | 3.43e+02 | 3.75e+02 | 3.52e+02 | 8.43e+00 | 8.55e+00 | 8.46e+00 | 2.03e-01 | 2.22e-01 | 2.09e-01 | 3.18e+03 | 1.78e+03 | 1.16e+01 | 1.08e+01 | 1.88e+00 | 1.05e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 7565259 | 7566105 | ENSMUSG00000096579 | 0.4510 | + | Gm17121 | processed_pseudogene | 5.81e-05 | 0.105738 | 11.7692 | 3.556948 | 4.00e+00 | 7.00e+00 | 1.20e+01 | 2.32e+00 | 3.00e+00 | 3.70e+00 | 3.19e-03 | 5.58e-03 | 9.57e-03 | 2.50e+01 | 1.77e+02 | 4.70e+00 | 7.48e+00 | 1.99e-02 | 1.41e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 191407666 | 191408247 | ENSMUSG00000103433 | 0.5017 | + | Gm2272 | processed_pseudogene | 6.17e-05 | 0.105738 | 7.8000 | 2.963474 | 3.00e+01 | 2.50e+01 | 1.20e+01 | 4.95e+00 | 4.70e+00 | 3.70e+00 | 2.39e-02 | 1.99e-02 | 9.57e-03 | 1.55e+02 | 2.07e+02 | 7.29e+00 | 7.70e+00 | 1.24e-01 | 1.65e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 23738808 | 23740367 | ENSMUSG00000036181 | 0.5506 | + | Hist1h1c | protein_coding | 6.59e-05 | 0.105738 | 7.9238 | 2.986198 | 4.40e+02 | 5.63e+02 | 5.30e+02 | 8.78e+00 | 9.14e+00 | 9.05e+00 | 2.34e-01 | 3.00e-01 | 2.82e-01 | 6.77e+03 | 1.34e+03 | 1.27e+01 | 1.04e+01 | 3.60e+00 | 7.15e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 117115168 | 117159268 | ENSMUSG00000020823 | 0.5133 | + | Sec14l1 | protein_coding | 1.07e-04 | 0.147071 | 5.3119 | 2.409241 | 2.02e+02 | 2.51e+02 | 2.22e+02 | 7.67e+00 | 7.98e+00 | 7.80e+00 | 2.74e-02 | 3.40e-02 | 3.01e-02 | 7.39e+02 | 1.66e+03 | 9.53e+00 | 1.07e+01 | 1.00e-01 | 2.25e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 61578585 | 61654171 | ENSMUSG00000064289 | 0.3756 | + | Tank | protein_coding | 1.07e-04 | 0.147071 | 5.2216 | 2.384498 | 7.30e+01 | 1.40e+02 | 1.54e+02 | 6.21e+00 | 7.14e+00 | 7.28e+00 | 7.58e-03 | 1.45e-02 | 1.60e-02 | 1.34e+02 | 1.15e+03 | 7.08e+00 | 1.02e+01 | 1.39e-02 | 1.20e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 128624530 | 128626506 | ENSMUSG00000025362 | 0.4871 | - | Rps26 | protein_coding | 1.32e-04 | 0.161350 | 6.2703 | 2.648527 | 1.78e+03 | 1.16e+03 | 1.22e+03 | 1.08e+01 | 1.02e+01 | 1.03e+01 | 1.34e+00 | 8.77e-01 | 9.18e-01 | 9.17e+03 | 8.20e+03 | 1.32e+01 | 1.30e+01 | 6.92e+00 | 6.19e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 82128013 | 82153065 | ENSMUSG00000078435 | 0.3990 | + | AU041133 | protein_coding | 1.37e-04 | 0.161350 | 21.8571 | 4.450033 | 0.00e+00 | 1.00e+00 | 3.00e+00 | 0.00e+00 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 4.33e-04 | 1.30e-03 | 0.00e+00 | 1.00e+02 | 0.00e+00 | 6.66e+00 | 0.00e+00 | 4.33e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 82115185 | 82116799 | ENSMUSG00000009185 | 0.4817 | + | Ccl8 | protein_coding | 1.45e-04 | 0.161350 | 6.6960 | 2.743300 | 1.80e+01 | 4.70e+01 | 5.70e+01 | 4.25e+00 | 5.58e+00 | 5.86e+00 | 1.27e-02 | 3.31e-02 | 4.02e-02 | 1.66e+02 | 3.90e+02 | 7.38e+00 | 8.61e+00 | 1.17e-01 | 2.75e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 48833818 | 48841496 | ENSMUSG00000029810 | 0.5115 | - | Tmem176b | protein_coding | 1.59e-04 | 0.161350 | 7.8448 | 2.971734 | 2.41e+03 | 3.07e+03 | 1.94e+03 | 1.12e+01 | 1.16e+01 | 1.09e+01 | 4.43e-01 | 5.64e-01 | 3.57e-01 | 2.65e+04 | 1.23e+04 | 1.47e+01 | 1.36e+01 | 4.87e+00 | 2.27e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 51746647 | 51747878 | ENSMUSG00000078636 | 0.5536 | + | Gm7336 | processed_pseudogene | 1.59e-04 | 0.161350 | 6.8494 | 2.775988 | 1.21e+02 | 1.13e+02 | 1.25e+02 | 6.93e+00 | 6.83e+00 | 6.98e+00 | 9.65e-02 | 9.01e-02 | 9.97e-02 | 1.27e+03 | 3.83e+02 | 1.03e+01 | 8.58e+00 | 1.01e+00 | 3.05e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164354070 | 164389095 | ENSMUSG00000017002 | 0.4508 | - | Slpi | protein_coding | 1.89e-04 | 0.181654 | 5.2524 | 2.392986 | 1.87e+02 | 1.54e+02 | 2.72e+02 | 7.55e+00 | 7.28e+00 | 8.09e+00 | 4.98e-02 | 4.10e-02 | 7.25e-02 | 7.86e+02 | 1.37e+03 | 9.62e+00 | 1.04e+01 | 2.09e-01 | 3.65e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 130164454 | 130175122 | ENSMUSG00000028776 | 0.5457 | - | Tinagl1 | protein_coding | 2.52e-04 | 0.220736 | 4.9903 | 2.319119 | 8.10e+01 | 9.10e+01 | 8.20e+01 | 6.36e+00 | 6.52e+00 | 6.38e+00 | 9.54e-03 | 1.07e-02 | 9.66e-03 | 3.32e+02 | 5.21e+02 | 8.38e+00 | 9.03e+00 | 3.91e-02 | 6.14e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 91171429 | 91172148 | ENSMUSG00000100018 | 0.4972 | - | Gm7776 | processed_pseudogene | 2.75e-04 | 0.220736 | 8.0841 | 3.015082 | 3.60e+01 | 3.30e+01 | 4.10e+01 | 5.21e+00 | 5.09e+00 | 5.39e+00 | 2.87e-02 | 2.63e-02 | 3.27e-02 | 4.90e+02 | 1.17e+02 | 8.94e+00 | 6.88e+00 | 3.91e-01 | 9.33e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 98402095 | 98403083 | ENSMUSG00000098113 | 0.5490 | - | Gm2445 | processed_pseudogene | 2.94e-04 | 0.220736 | 23.7857 | 4.572023 | 1.00e+00 | 2.00e+00 | 1.00e+00 | 1.00e+00 | 1.58e+00 | 1.00e+00 | 7.97e-04 | 1.59e-03 | 7.97e-04 | 9.00e+01 | 1.90e+01 | 6.51e+00 | 4.32e+00 | 7.18e-02 | 1.52e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 122230195 | 122231196 | ENSMUSG00000078592 | 0.5499 | - | Gm4609 | processed_pseudogene | 3.04e-04 | 0.220736 | 9.5948 | 3.262257 | 2.20e+01 | 2.00e+01 | 1.30e+01 | 4.52e+00 | 4.39e+00 | 3.81e+00 | 1.75e-02 | 1.59e-02 | 1.04e-02 | 2.94e+02 | 7.50e+01 | 8.20e+00 | 6.25e+00 | 2.34e-01 | 5.98e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 37599424 | 37600072 | ENSMUSG00000081093 | 0.5223 | - | Gm12565 | processed_pseudogene | 3.69e-04 | 0.220736 | 7.2842 | 2.864765 | 4.00e+01 | 5.00e+01 | 4.60e+01 | 5.36e+00 | 5.67e+00 | 5.55e+00 | 3.19e-02 | 3.99e-02 | 3.67e-02 | 4.95e+02 | 1.78e+02 | 8.95e+00 | 7.48e+00 | 3.95e-01 | 1.42e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 121489824 | 121495694 | ENSMUSG00000032532 | 0.4916 | - | Cck | protein_coding | 4.13e-04 | 0.220736 | 6.8538 | 2.776914 | 1.50e+01 | 1.30e+01 | 3.40e+01 | 4.00e+00 | 3.81e+00 | 5.13e+00 | 5.34e-03 | 4.63e-03 | 1.21e-02 | 1.03e+02 | 1.92e+02 | 6.70e+00 | 7.59e+00 | 3.67e-02 | 6.83e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 134702593 | 134747323 | ENSMUSG00000029675 | 0.4978 | - | Eln | protein_coding | 4.30e-04 | 0.220736 | 0.1546 | -2.693022 | 3.25e+02 | 1.06e+02 | 6.33e+02 | 8.35e+00 | 6.74e+00 | 9.31e+00 | 1.94e-02 | 6.33e-03 | 3.78e-02 | 5.20e+01 | 5.60e+01 | 5.73e+00 | 5.83e+00 | 3.11e-03 | 3.35e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 25924000 | 25927672 | ENSMUSG00000072676 | 0.4666 | - | Tmem254a | protein_coding | 4.43e-04 | 0.220736 | 8.0400 | 3.007196 | 3.00e+01 | 1.90e+01 | 2.30e+01 | 4.95e+00 | 4.32e+00 | 4.58e+00 | 6.94e-03 | 4.39e-03 | 5.32e-03 | 3.05e+02 | 9.50e+01 | 8.26e+00 | 6.58e+00 | 7.05e-02 | 2.20e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 43506966 | 43513729 | ENSMUSG00000028463 | 0.5099 | + | Car9 | protein_coding | 4.54e-04 | 0.220736 | 5.7540 | 2.524573 | 9.30e+01 | 2.22e+02 | 5.40e+01 | 6.55e+00 | 7.80e+00 | 5.78e+00 | 2.02e-02 | 4.82e-02 | 1.17e-02 | 9.09e+02 | 5.16e+02 | 9.83e+00 | 9.01e+00 | 1.97e-01 | 1.12e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 57550299 | 57551303 | ENSMUSG00000070025 | 0.5483 | + | Gm10284 | processed_pseudogene | 4.89e-04 | 0.220736 | 5.8567 | 2.550098 | 1.45e+02 | 1.01e+02 | 1.07e+02 | 7.19e+00 | 6.67e+00 | 6.75e+00 | 1.16e-01 | 8.05e-02 | 8.53e-02 | 1.07e+03 | 3.22e+02 | 1.01e+01 | 8.34e+00 | 8.50e-01 | 2.57e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 54254188 | 54270637 | ENSMUSG00000040997 | 0.4692 | + | Abhd4 | protein_coding | 5.33e-04 | 0.220736 | 4.1523 | 2.053901 | 2.70e+02 | 1.77e+02 | 2.10e+02 | 8.08e+00 | 7.48e+00 | 7.72e+00 | 3.47e-02 | 2.28e-02 | 2.70e-02 | 5.31e+02 | 1.29e+03 | 9.06e+00 | 1.03e+01 | 6.83e-02 | 1.67e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group1_vs_group4.Download the whole result list for group1_vs_group4.DEG table for the contrast group2_vs_group3The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group2_vs_group3. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group2_vs_group3 | log2_normalized_fold_change_group2_vs_group3 | natural_normalized_counts_4_Tg197_1_SFs | natural_normalized_counts_5_Tg197_2_SFs | natural_normalized_counts_6_Tg197_3_SFs | log2_normalized_counts_4_Tg197_1_SFs | log2_normalized_counts_5_Tg197_2_SFs | log2_normalized_counts_6_Tg197_3_SFs | rpgm_normalized_counts_4_Tg197_1_SFs | rpgm_normalized_counts_5_Tg197_2_SFs | rpgm_normalized_counts_6_Tg197_3_SFs | natural_normalized_counts_7_TNF_DeltaARE_1_SFs | natural_normalized_counts_8_TNF_DeltaARE_2_SFs | natural_normalized_counts_9_TNF_DeltaARE_3_SFs | log2_normalized_counts_7_TNF_DeltaARE_1_SFs | log2_normalized_counts_8_TNF_DeltaARE_2_SFs | log2_normalized_counts_9_TNF_DeltaARE_3_SFs | rpgm_normalized_counts_7_TNF_DeltaARE_1_SFs | rpgm_normalized_counts_8_TNF_DeltaARE_2_SFs | rpgm_normalized_counts_9_TNF_DeltaARE_3_SFs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr17 | 35170991 | 35176068 | ENSMUSG00000024397 | 0.5228 | - | Aif1 | protein_coding | 7.33e-13 | 1.41e-08 | 0.0243 | -5.362570 | 4.40e+01 | 3.70e+01 | 7.80e+02 | 5.49e+00 | 5.25e+00 | 9.61e+00 | 1.13e-02 | 9.54e-03 | 2.01e-01 | 6.00e+00 | 5.00e+00 | 7.00e+00 | 2.81e+00 | 2.58e+00 | 3.00e+00 | 1.55e-03 | 1.29e-03 | 1.80e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 122921848 | 122934619 | ENSMUSG00000049037 | 0.4108 | + | Clec4a1 | protein_coding | 7.00e-10 | 6.74e-06 | 0.0486 | -4.362416 | 1.97e+02 | 1.24e+02 | 1.01e+03 | 7.63e+00 | 6.97e+00 | 9.99e+00 | 1.01e-01 | 6.37e-02 | 5.20e-01 | 2.80e+01 | 2.70e+01 | 7.00e+00 | 4.86e+00 | 4.81e+00 | 3.00e+00 | 1.44e-02 | 1.39e-02 | 3.59e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 120474538 | 120505024 | ENSMUSG00000026390 | 0.4694 | - | Marco | protein_coding | 1.61e-09 | 1.03e-05 | 0.0630 | -3.988685 | 7.41e+02 | 8.39e+02 | 8.30e+02 | 9.54e+00 | 9.71e+00 | 9.70e+00 | 2.82e-01 | 3.19e-01 | 3.16e-01 | 6.30e+01 | 5.70e+01 | 2.90e+01 | 6.00e+00 | 5.86e+00 | 4.91e+00 | 2.40e-02 | 2.17e-02 | 1.10e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 172475358 | 172478575 | ENSMUSG00000026548 | 0.4723 | + | Slamf9 | protein_coding | 6.27e-09 | 3.02e-05 | 0.0230 | -5.439623 | 3.40e+01 | 1.50e+01 | 1.65e+02 | 5.13e+00 | 4.00e+00 | 7.38e+00 | 2.17e-02 | 9.55e-03 | 1.05e-01 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 1.27e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 87250758 | 87263738 | ENSMUSG00000015852 | 0.4453 | - | Fcrls | protein_coding | 1.22e-08 | 4.70e-05 | 0.0248 | -5.336283 | 5.60e+01 | 1.70e+01 | 1.26e+02 | 5.83e+00 | 4.17e+00 | 6.99e+00 | 1.79e-02 | 5.44e-03 | 4.03e-02 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 6.40e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 78559169 | 78572783 | ENSMUSG00000033220 | 0.5340 | - | Rac2 | protein_coding | 2.30e-08 | 7.37e-05 | 0.0770 | -3.698770 | 3.40e+02 | 9.70e+01 | 1.29e+03 | 8.41e+00 | 6.61e+00 | 1.03e+01 | 7.44e-02 | 2.12e-02 | 2.81e-01 | 6.90e+01 | 4.50e+01 | 1.60e+01 | 6.13e+00 | 5.52e+00 | 4.09e+00 | 1.51e-02 | 9.84e-03 | 3.50e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 116633008 | 116673952 | ENSMUSG00000042129 | 0.4884 | - | Rassf4 | protein_coding | 3.93e-08 | 1.08e-04 | 0.0592 | -4.077184 | 8.80e+01 | 8.10e+01 | 8.07e+02 | 6.48e+00 | 6.36e+00 | 9.66e+00 | 7.44e-03 | 6.84e-03 | 6.82e-02 | 1.80e+01 | 2.90e+01 | 8.00e+00 | 4.25e+00 | 4.91e+00 | 3.17e+00 | 1.52e-03 | 2.45e-03 | 6.76e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 165405028 | 165473230 | ENSMUSG00000018459 | 0.5038 | - | Slc13a3 | protein_coding | 7.24e-08 | 1.74e-04 | 0.0787 | -3.668133 | 3.20e+02 | 2.21e+02 | 2.95e+02 | 8.33e+00 | 7.79e+00 | 8.21e+00 | 5.88e-02 | 4.06e-02 | 5.42e-02 | 2.50e+01 | 2.50e+01 | 1.30e+01 | 4.70e+00 | 4.70e+00 | 3.81e+00 | 4.60e-03 | 4.60e-03 | 2.39e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 129342691 | 129365303 | ENSMUSG00000053063 | 0.3896 | + | Clec12a | protein_coding | 9.64e-08 | 2.06e-04 | 0.0542 | -4.205549 | 9.80e+01 | 2.20e+01 | 6.15e+02 | 6.63e+00 | 4.52e+00 | 9.27e+00 | 1.96e-02 | 4.40e-03 | 1.23e-01 | 1.90e+01 | 1.70e+01 | 1.00e+00 | 4.32e+00 | 4.17e+00 | 1.00e+00 | 3.80e-03 | 3.40e-03 | 2.00e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83662584 | 83664683 | ENSMUSG00000018930 | 0.4457 | + | Ccl4 | protein_coding | 1.58e-07 | 3.04e-04 | 0.0913 | -3.453503 | 4.30e+02 | 1.53e+02 | 2.33e+03 | 8.75e+00 | 7.27e+00 | 1.12e+01 | 2.76e-01 | 9.83e-02 | 1.50e+00 | 9.70e+01 | 1.11e+02 | 5.50e+01 | 6.61e+00 | 6.81e+00 | 5.81e+00 | 6.23e-02 | 7.13e-02 | 3.53e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 103460375 | 103483217 | ENSMUSG00000086503 | 0.4122 | - | Xist | lincRNA | 5.42e-07 | 8.90e-04 | 36.0000 | 5.169925 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 1.05e+02 | 0.00e+00 | 0.00e+00 | 6.73e+00 | 0.00e+00 | 0.00e+00 | 3.98e-02 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 55523235 | 55528538 | ENSMUSG00000035711 | 0.5396 | - | Dok3 | protein_coding | 5.64e-07 | 8.90e-04 | 0.0344 | -4.862947 | 2.80e+01 | 1.70e+01 | 2.43e+02 | 4.86e+00 | 4.17e+00 | 7.93e+00 | 1.94e-02 | 1.18e-02 | 1.69e-01 | 6.00e+00 | 0.00e+00 | 1.00e+00 | 2.81e+00 | 0.00e+00 | 1.00e+00 | 4.16e-03 | 0.00e+00 | 6.94e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127132232 | 127137823 | ENSMUSG00000051457 | 0.5097 | - | Spn | protein_coding | 6.01e-07 | 8.90e-04 | 0.0744 | -3.747745 | 2.30e+01 | 2.00e+01 | 3.57e+02 | 4.58e+00 | 4.39e+00 | 8.48e+00 | 4.02e-03 | 3.50e-03 | 6.24e-02 | 7.00e+00 | 3.00e+00 | 1.70e+01 | 3.00e+00 | 2.00e+00 | 4.17e+00 | 1.22e-03 | 5.24e-04 | 2.97e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 134220053 | 134229625 | ENSMUSG00000015950 | 0.5368 | - | Ncf1 | protein_coding | 9.36e-07 | 1.29e-03 | 0.0807 | -3.631694 | 1.24e+02 | 6.30e+01 | 8.14e+02 | 6.97e+00 | 6.00e+00 | 9.67e+00 | 2.19e-02 | 1.11e-02 | 1.44e-01 | 3.00e+01 | 4.40e+01 | 4.00e+00 | 4.95e+00 | 5.49e+00 | 2.32e+00 | 5.30e-03 | 7.78e-03 | 7.07e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 22126727 | 22135711 | ENSMUSG00000001348 | 0.5233 | - | Acp5 | protein_coding | 1.86e-06 | 2.38e-03 | 0.1332 | -2.908199 | 1.16e+03 | 4.18e+02 | 6.29e+02 | 1.02e+01 | 8.71e+00 | 9.30e+00 | 4.13e-01 | 1.49e-01 | 2.25e-01 | 1.82e+02 | 1.07e+02 | 2.00e+00 | 7.52e+00 | 6.75e+00 | 1.58e+00 | 6.50e-02 | 3.82e-02 | 7.14e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 17876471 | 17883940 | ENSMUSG00000045551 | 0.4003 | - | Fpr1 | protein_coding | 2.75e-06 | 3.31e-03 | 0.0848 | -3.560384 | 6.20e+01 | 5.40e+01 | 7.54e+02 | 5.98e+00 | 5.78e+00 | 9.56e+00 | 4.38e-02 | 3.82e-02 | 5.33e-01 | 4.00e+01 | 2.60e+01 | 5.00e+00 | 5.36e+00 | 4.75e+00 | 2.58e+00 | 2.83e-02 | 1.84e-02 | 3.54e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 75131101 | 75230842 | ENSMUSG00000021998 | 0.4291 | + | Lcp1 | protein_coding | 4.06e-06 | 4.59e-03 | 0.1354 | -2.884674 | 4.54e+02 | 2.07e+02 | 2.27e+03 | 8.83e+00 | 7.70e+00 | 1.11e+01 | 4.95e-02 | 2.26e-02 | 2.47e-01 | 2.11e+02 | 1.29e+02 | 5.40e+01 | 7.73e+00 | 7.02e+00 | 5.78e+00 | 2.30e-02 | 1.41e-02 | 5.89e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group2_vs_group3.Download the whole result list for group2_vs_group3.DEG table for the contrast group3_vs_group4The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group3_vs_group4. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group3_vs_group4 | log2_normalized_fold_change_group3_vs_group4 | natural_normalized_counts_7_TNF_DeltaARE_1_SFs | natural_normalized_counts_8_TNF_DeltaARE_2_SFs | natural_normalized_counts_9_TNF_DeltaARE_3_SFs | log2_normalized_counts_7_TNF_DeltaARE_1_SFs | log2_normalized_counts_8_TNF_DeltaARE_2_SFs | log2_normalized_counts_9_TNF_DeltaARE_3_SFs | rpgm_normalized_counts_7_TNF_DeltaARE_1_SFs | rpgm_normalized_counts_8_TNF_DeltaARE_2_SFs | rpgm_normalized_counts_9_TNF_DeltaARE_3_SFs | natural_normalized_counts_10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs | natural_normalized_counts_11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs | log2_normalized_counts_10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs | log2_normalized_counts_11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs | rpgm_normalized_counts_10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs | rpgm_normalized_counts_11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr15 | 75044018 | 75048830 | ENSMUSG00000079018 | 0.4820 | - | Ly6c1 | protein_coding | 8.01e-08 | 0.00154 | 11.0898 | 3.471165 | 1.32e+02 | 2.03e+02 | 2.52e+02 | 7.06e+00 | 7.67e+00 | 7.98e+00 | 3.67e-02 | 5.65e-02 | 7.01e-02 | 1.18e+03 | 3.18e+03 | 1.02e+01 | 1.16e+01 | 3.28e-01 | 8.84e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 7558456 | 7568485 | ENSMUSG00000005800 | 0.4099 | + | Mmp8 | protein_coding | 5.78e-07 | 0.00557 | 0.0313 | -4.997686 | 4.11e+02 | 2.02e+02 | 7.00e+00 | 8.69e+00 | 7.67e+00 | 3.00e+00 | 1.87e-01 | 9.18e-02 | 3.18e-03 | 7.00e+00 | 4.00e+00 | 3.00e+00 | 2.32e+00 | 3.18e-03 | 1.82e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 65968483 | 65981548 | ENSMUSG00000022037 | 0.5061 | + | Clu | protein_coding | 9.14e-07 | 0.00586 | 10.9274 | 3.449872 | 1.35e+02 | 1.19e+02 | 9.40e+01 | 7.09e+00 | 6.91e+00 | 6.57e+00 | 1.96e-02 | 1.73e-02 | 1.36e-02 | 1.85e+03 | 7.03e+02 | 1.09e+01 | 9.46e+00 | 2.69e-01 | 1.02e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 43730602 | 43742578 | ENSMUSG00000026051 | 0.4381 | + | 1500015O10Rik | protein_coding | 1.53e-05 | 0.07118 | 7.1767 | 2.843330 | 1.17e+02 | 1.80e+02 | 2.29e+02 | 6.88e+00 | 7.50e+00 | 7.85e+00 | 8.20e-02 | 1.26e-01 | 1.61e-01 | 1.12e+03 | 1.40e+03 | 1.01e+01 | 1.05e+01 | 7.89e-01 | 9.85e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 26786633 | 26787634 | ENSMUSG00000069939 | 0.5509 | + | Gm12070 | processed_pseudogene | 2.02e-05 | 0.07118 | 8.3884 | 3.068390 | 2.78e+02 | 2.94e+02 | 2.76e+02 | 8.12e+00 | 8.20e+00 | 8.11e+00 | 2.22e-01 | 2.34e-01 | 2.20e-01 | 3.92e+03 | 8.41e+02 | 1.19e+01 | 9.72e+00 | 3.12e+00 | 6.71e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 23738808 | 23740367 | ENSMUSG00000036181 | 0.5506 | + | Hist1h1c | protein_coding | 2.49e-05 | 0.07118 | 8.6136 | 3.106614 | 5.11e+02 | 5.57e+02 | 3.42e+02 | 9.00e+00 | 9.12e+00 | 8.42e+00 | 2.72e-01 | 2.96e-01 | 1.82e-01 | 6.77e+03 | 1.34e+03 | 1.27e+01 | 1.04e+01 | 3.60e+00 | 7.15e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 101266846 | 101274792 | ENSMUSG00000023034 | 0.5561 | + | Nr4a1 | protein_coding | 2.59e-05 | 0.07118 | 6.7150 | 2.747393 | 3.07e+02 | 3.24e+02 | 1.38e+02 | 8.27e+00 | 8.34e+00 | 7.12e+00 | 1.71e-01 | 1.81e-01 | 7.69e-02 | 1.55e+03 | 1.90e+03 | 1.06e+01 | 1.09e+01 | 8.64e-01 | 1.06e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 56119680 | 56121946 | ENSMUSG00000037095 | 0.5880 | - | Lrg1 | protein_coding | 4.91e-05 | 0.10800 | 16.9000 | 4.078951 | 3.00e+00 | 7.00e+00 | 2.00e+00 | 2.00e+00 | 3.00e+00 | 1.58e+00 | 1.98e-03 | 4.62e-03 | 1.32e-03 | 7.80e+01 | 8.90e+01 | 6.30e+00 | 6.49e+00 | 5.15e-02 | 5.87e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 93235841 | 93301065 | ENSMUSG00000047793 | 0.4874 | + | Sned1 | protein_coding | 5.22e-05 | 0.10800 | 6.5231 | 2.705555 | 1.00e+02 | 1.88e+02 | 3.37e+02 | 6.66e+00 | 7.56e+00 | 8.40e+00 | 1.02e-02 | 1.92e-02 | 3.44e-02 | 1.47e+03 | 1.26e+03 | 1.05e+01 | 1.03e+01 | 1.50e-01 | 1.29e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 103460375 | 103483217 | ENSMUSG00000086503 | 0.4122 | - | Xist | lincRNA | 5.88e-05 | 0.10800 | 0.0278 | -5.169925 | 1.05e+02 | 0.00e+00 | 0.00e+00 | 6.73e+00 | 0.00e+00 | 0.00e+00 | 3.98e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 7344381 | 7369499 | ENSMUSG00000049723 | 0.3782 | + | Mmp12 | protein_coding | 6.79e-05 | 0.10800 | 0.1186 | -3.076386 | 1.08e+03 | 5.93e+02 | 1.04e+02 | 1.01e+01 | 9.21e+00 | 6.71e+00 | 7.44e-02 | 4.07e-02 | 7.13e-03 | 8.90e+01 | 5.00e+01 | 6.49e+00 | 5.67e+00 | 6.10e-03 | 3.43e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 129364570 | 129371139 | ENSMUSG00000027398 | 0.4534 | - | Il1b | protein_coding | 7.19e-05 | 0.10800 | 0.0500 | -4.321928 | 2.17e+02 | 7.50e+01 | 5.00e+00 | 7.77e+00 | 6.25e+00 | 2.58e+00 | 7.09e-02 | 2.45e-02 | 1.63e-03 | 7.00e+00 | 1.00e+00 | 3.00e+00 | 1.00e+00 | 2.29e-03 | 3.27e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 128624530 | 128626506 | ENSMUSG00000025362 | 0.4871 | - | Rps26 | protein_coding | 7.29e-05 | 0.10800 | 6.9974 | 2.806829 | 1.06e+03 | 1.24e+03 | 1.42e+03 | 1.01e+01 | 1.03e+01 | 1.05e+01 | 8.00e-01 | 9.37e-01 | 1.07e+00 | 9.17e+03 | 8.20e+03 | 1.32e+01 | 1.30e+01 | 6.92e+00 | 6.19e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 82128013 | 82153065 | ENSMUSG00000078435 | 0.3990 | + | AU041133 | protein_coding | 1.09e-04 | 0.14989 | 21.8571 | 4.450033 | 1.00e+00 | 1.00e+00 | 2.00e+00 | 1.00e+00 | 1.00e+00 | 1.58e+00 | 4.33e-04 | 4.33e-04 | 8.67e-04 | 0.00e+00 | 1.00e+02 | 0.00e+00 | 6.66e+00 | 0.00e+00 | 4.33e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 43506966 | 43513729 | ENSMUSG00000028463 | 0.5099 | + | Car9 | protein_coding | 1.40e-04 | 0.18010 | 6.6065 | 2.723882 | 1.67e+02 | 1.32e+02 | 2.20e+01 | 7.39e+00 | 7.06e+00 | 4.52e+00 | 3.62e-02 | 2.86e-02 | 4.77e-03 | 9.09e+02 | 5.16e+02 | 9.83e+00 | 9.01e+00 | 1.97e-01 | 1.12e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 11586604 | 11604849 | ENSMUSG00000024679 | 0.4128 | - | Ms4a6d | protein_coding | 1.59e-04 | 0.18693 | 0.0947 | -3.399931 | 1.00e+02 | 6.70e+01 | 2.00e+01 | 6.66e+00 | 6.09e+00 | 4.39e+00 | 3.34e-02 | 2.24e-02 | 6.69e-03 | 7.00e+00 | 3.00e+00 | 3.00e+00 | 2.00e+00 | 2.34e-03 | 1.00e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 24915208 | 24927470 | ENSMUSG00000019987 | 0.4364 | - | Arg1 | protein_coding | 1.73e-04 | 0.18693 | 0.0213 | -5.551174 | 1.85e+02 | 2.20e+01 | 1.00e+00 | 7.54e+00 | 4.52e+00 | 1.00e+00 | 1.12e-01 | 1.33e-02 | 6.04e-04 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 6.04e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 95129536 | 95134011 | ENSMUSG00000092607 | 0.4647 | - | Scnm1 | protein_coding | 1.75e-04 | 0.18693 | 7.0482 | 2.817253 | 2.70e+01 | 3.40e+01 | 1.90e+01 | 4.81e+00 | 5.13e+00 | 4.32e+00 | 9.45e-03 | 1.19e-02 | 6.65e-03 | 2.02e+02 | 1.86e+02 | 7.67e+00 | 7.55e+00 | 7.07e-02 | 6.51e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 122494613 | 122495251 | ENSMUSG00000093669 | 0.4883 | - | Gm9399 | processed_pseudogene | 2.05e-04 | 0.20209 | 18.3158 | 4.195016 | 3.00e+00 | 7.00e+00 | 6.00e+00 | 2.00e+00 | 3.00e+00 | 2.81e+00 | 2.39e-03 | 5.58e-03 | 4.78e-03 | 1.90e+02 | 4.00e+01 | 7.58e+00 | 5.36e+00 | 1.52e-01 | 3.19e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 83766321 | 83774316 | ENSMUSG00000027996 | 0.4816 | + | Sfrp2 | protein_coding | 2.10e-04 | 0.20209 | 5.7008 | 2.511167 | 1.18e+02 | 1.83e+02 | 1.55e+03 | 6.89e+00 | 7.52e+00 | 1.06e+01 | 2.53e-02 | 3.93e-02 | 3.33e-01 | 4.37e+03 | 2.68e+03 | 1.21e+01 | 1.14e+01 | 9.38e-01 | 5.76e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 114896936 | 114912234 | ENSMUSG00000029561 | 0.4664 | + | Oasl2 | protein_coding | 3.10e-04 | 0.26209 | 4.8029 | 2.263908 | 2.35e+02 | 2.35e+02 | 1.46e+02 | 7.88e+00 | 7.88e+00 | 7.20e+00 | 2.06e-02 | 2.06e-02 | 1.28e-02 | 7.15e+02 | 1.26e+03 | 9.48e+00 | 1.03e+01 | 6.26e-02 | 1.11e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 41605482 | 41620509 | ENSMUSG00000029869 | 0.4900 | + | Ephb6 | protein_coding | 3.30e-04 | 0.26209 | 10.7812 | 3.430453 | 9.00e+00 | 1.00e+01 | 1.00e+01 | 3.32e+00 | 3.46e+00 | 3.46e+00 | 1.22e-03 | 1.36e-03 | 1.36e-03 | 1.19e+02 | 1.09e+02 | 6.91e+00 | 6.78e+00 | 1.62e-02 | 1.48e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127893063 | 127895617 | ENSMUSG00000096145 | 0.4982 | - | Vkorc1 | protein_coding | 3.30e-04 | 0.26209 | 6.1577 | 2.622385 | 4.49e+02 | 5.11e+02 | 4.45e+02 | 8.81e+00 | 9.00e+00 | 8.80e+00 | 3.03e-01 | 3.45e-01 | 3.01e-01 | 4.71e+03 | 1.06e+03 | 1.22e+01 | 1.01e+01 | 3.18e+00 | 7.20e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127886227 | 127895454 | ENSMUSG00000030804 | 0.5144 | - | Gm21974 | protein_coding | 3.36e-04 | 0.26209 | 6.1488 | 2.620312 | 4.49e+02 | 5.13e+02 | 4.46e+02 | 8.81e+00 | 9.01e+00 | 8.80e+00 | 3.47e-02 | 3.97e-02 | 3.45e-02 | 4.72e+03 | 1.06e+03 | 1.22e+01 | 1.01e+01 | 3.65e-01 | 8.24e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 46713205 | 46728342 | ENSMUSG00000033022 | 0.4236 | - | Cdo1 | protein_coding | 3.49e-04 | 0.26209 | 5.2609 | 2.395301 | 5.80e+01 | 4.20e+01 | 3.50e+01 | 5.88e+00 | 5.43e+00 | 5.17e+00 | 2.93e-02 | 2.12e-02 | 1.77e-02 | 2.22e+02 | 2.60e+02 | 7.80e+00 | 8.03e+00 | 1.12e-01 | 1.31e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 54902453 | 54910377 | ENSMUSG00000018339 | 0.5380 | + | Gpx3 | protein_coding | 3.54e-04 | 0.26209 | 4.9549 | 2.308864 | 1.32e+03 | 9.92e+02 | 4.26e+02 | 1.04e+01 | 9.96e+00 | 8.74e+00 | 6.29e-01 | 4.73e-01 | 2.03e-01 | 3.80e+03 | 5.25e+03 | 1.19e+01 | 1.24e+01 | 1.81e+00 | 2.50e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 108012255 | 108017973 | ENSMUSG00000058135 | 0.5130 | - | Gstm1 | protein_coding | 3.76e-04 | 0.26812 | 5.5549 | 2.473769 | 4.25e+02 | 5.87e+02 | 3.23e+02 | 8.73e+00 | 9.20e+00 | 8.34e+00 | 2.52e-01 | 3.48e-01 | 1.91e-01 | 3.18e+03 | 1.78e+03 | 1.16e+01 | 1.08e+01 | 1.88e+00 | 1.05e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164940780 | 164955850 | ENSMUSG00000017737 | 0.5213 | + | Mmp9 | protein_coding | 4.02e-04 | 0.27612 | 0.1894 | -2.400148 | 1.48e+03 | 6.16e+02 | 1.22e+02 | 1.05e+01 | 9.27e+00 | 6.94e+00 | 3.14e-01 | 1.31e-01 | 2.59e-02 | 2.60e+02 | 1.80e+01 | 8.03e+00 | 4.25e+00 | 5.52e-02 | 3.82e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 81372213 | 81373221 | ENSMUSG00000067224 | 0.5471 | - | Gm3695 | processed_pseudogene | 4.35e-04 | 0.28507 | 14.0714 | 3.814697 | 6.00e+00 | 6.00e+00 | 6.00e+00 | 2.81e+00 | 2.81e+00 | 2.81e+00 | 4.78e-03 | 4.78e-03 | 4.78e-03 | 1.46e+02 | 4.90e+01 | 7.20e+00 | 5.64e+00 | 1.16e-01 | 3.91e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 143390730 | 143403748 | ENSMUSG00000093720 | 0.4898 | - | Gm20635 | antisense | 4.68e-04 | 0.28507 | 21.0000 | 4.392317 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 4.00e+01 | 0.00e+00 | 5.36e+00 | 0.00e+00 | 3.19e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 76708792 | 76726168 | ENSMUSG00000001119 | 0.5416 | - | Col6a1 | protein_coding | 4.68e-04 | 0.28507 | 4.2690 | 2.093908 | 3.42e+02 | 3.47e+02 | 4.51e+02 | 8.42e+00 | 8.44e+00 | 8.82e+00 | 1.04e-01 | 1.06e-01 | 1.38e-01 | 8.69e+02 | 2.38e+03 | 9.76e+00 | 1.12e+01 | 2.65e-01 | 7.27e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 11375523 | 11392790 | ENSMUSG00000101389 | 0.3817 | + | Ms4a4a | protein_coding | 4.74e-04 | 0.28507 | 0.0294 | -5.087463 | 8.80e+01 | 1.10e+01 | 0.00e+00 | 6.48e+00 | 3.58e+00 | 0.00e+00 | 7.02e-02 | 8.77e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 90772435 | 90773383 | ENSMUSG00000029373 | 0.5195 | + | Pf4 | protein_coding | 5.24e-04 | 0.29694 | 0.1721 | -2.538866 | 1.04e+03 | 3.22e+02 | 2.60e+01 | 1.00e+01 | 8.34e+00 | 4.75e+00 | 6.51e-01 | 2.03e-01 | 1.64e-02 | 1.35e+02 | 2.20e+01 | 7.09e+00 | 4.52e+00 | 8.50e-02 | 1.38e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 48833818 | 48841496 | ENSMUSG00000029810 | 0.5115 | - | Tmem176b | protein_coding | 5.24e-04 | 0.29694 | 6.7334 | 2.751342 | 2.53e+03 | 3.48e+03 | 2.64e+03 | 1.13e+01 | 1.18e+01 | 1.14e+01 | 4.66e-01 | 6.39e-01 | 4.85e-01 | 2.65e+04 | 1.23e+04 | 1.47e+01 | 1.36e+01 | 4.87e+00 | 2.27e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 92483952 | 92485895 | ENSMUSG00000050359 | 0.4573 | - | Sprr1a | protein_coding | 5.45e-04 | 0.30004 | 9.2500 | 3.209453 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.92e-03 | 0.00e+00 | 0.00e+00 | 2.90e+01 | 6.00e+00 | 4.91e+00 | 2.81e+00 | 1.86e-02 | 3.85e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 37599424 | 37600072 | ENSMUSG00000081093 | 0.5223 | - | Gm12565 | processed_pseudogene | 5.94e-04 | 0.30908 | 6.7053 | 2.745301 | 3.70e+01 | 4.90e+01 | 6.20e+01 | 5.25e+00 | 5.64e+00 | 5.98e+00 | 2.95e-02 | 3.91e-02 | 4.94e-02 | 4.95e+02 | 1.78e+02 | 8.95e+00 | 7.48e+00 | 3.95e-01 | 1.42e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 75589340 | 75617200 | ENSMUSG00000006344 | 0.4745 | + | Ggt5 | protein_coding | 5.98e-04 | 0.30908 | 6.5714 | 2.716207 | 1.20e+01 | 2.00e+01 | 2.80e+01 | 3.70e+00 | 4.39e+00 | 4.86e+00 | 1.94e-03 | 3.23e-03 | 4.53e-03 | 1.19e+02 | 1.55e+02 | 6.91e+00 | 7.29e+00 | 1.92e-02 | 2.51e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 53669177 | 53670408 | ENSMUSG00000067924 | 0.5966 | - | Cxx1b | protein_coding | 6.10e-04 | 0.30908 | 4.5632 | 2.190054 | 1.84e+02 | 1.92e+02 | 3.09e+02 | 7.53e+00 | 7.59e+00 | 8.28e+00 | 1.03e-01 | 1.08e-01 | 1.74e-01 | 9.79e+02 | 1.11e+03 | 9.94e+00 | 1.01e+01 | 5.50e-01 | 6.25e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 70373558 | 70382066 | ENSMUSG00000031849 | 0.5643 | + | Comp | protein_coding | 6.65e-04 | 0.32832 | 4.1109 | 2.039459 | 9.30e+01 | 7.90e+01 | 3.84e+02 | 6.55e+00 | 6.32e+00 | 8.59e+00 | 1.50e-02 | 1.28e-02 | 6.20e-02 | 5.17e+02 | 1.01e+03 | 9.02e+00 | 9.99e+00 | 8.35e-02 | 1.64e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group3_vs_group4.Download the whole result list for group3_vs_group4.DEG table for the contrast group5_vs_group6The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group5_vs_group6. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group5_vs_group6 | log2_normalized_fold_change_group5_vs_group6 | natural_normalized_counts_12_Wt_1_VICs | natural_normalized_counts_13_Wt_2_VICs | natural_normalized_counts_14_Wt_3_VICs | log2_normalized_counts_12_Wt_1_VICs | log2_normalized_counts_13_Wt_2_VICs | log2_normalized_counts_14_Wt_3_VICs | rpgm_normalized_counts_12_Wt_1_VICs | rpgm_normalized_counts_13_Wt_2_VICs | rpgm_normalized_counts_14_Wt_3_VICs | natural_normalized_counts_15_Tg197_1_VICs | natural_normalized_counts_16_Tg197_2_VICs | natural_normalized_counts_17_Tg197_3_VICs | log2_normalized_counts_15_Tg197_1_VICs | log2_normalized_counts_16_Tg197_2_VICs | log2_normalized_counts_17_Tg197_3_VICs | rpgm_normalized_counts_15_Tg197_1_VICs | rpgm_normalized_counts_16_Tg197_2_VICs | rpgm_normalized_counts_17_Tg197_3_VICs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chrX | 103460375 | 103483217 | ENSMUSG00000086503 | 0.4122 | - | Xist | lincRNA | 4.57e-11 | 8.79e-07 | 0.0137 | -6.194757 | 0.00e+00 | 1.80e+02 | 1.10e+02 | 0.00e+00 | 7.50e+00 | 6.79e+00 | 0.00e+00 | 6.82e-02 | 4.17e-02 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.79e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 153740349 | 153745468 | ENSMUSG00000026475 | 0.5045 | + | Rgs16 | protein_coding | 2.94e-10 | 2.83e-06 | 0.0308 | -5.019343 | 3.60e+01 | 4.80e+01 | 6.82e+03 | 5.21e+00 | 5.61e+00 | 1.27e+01 | 1.26e-02 | 1.67e-02 | 2.38e+00 | 5.90e+01 | 6.20e+01 | 8.90e+01 | 5.91e+00 | 5.98e+00 | 6.49e+00 | 2.06e-02 | 2.16e-02 | 3.10e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 56477846 | 56690128 | ENSMUSG00000035258 | 0.3922 | + | Abi3bp | protein_coding | 1.33e-09 | 8.54e-06 | 0.0570 | -4.133025 | 2.00e+00 | 1.88e+02 | 0.00e+00 | 1.58e+00 | 7.56e+00 | 0.00e+00 | 8.57e-04 | 8.06e-02 | 0.00e+00 | 1.00e+00 | 5.00e+00 | 2.00e+00 | 1.00e+00 | 2.58e+00 | 1.58e+00 | 4.29e-04 | 2.14e-03 | 8.57e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83662584 | 83664683 | ENSMUSG00000018930 | 0.4457 | + | Ccl4 | protein_coding | 2.91e-09 | 1.31e-05 | 21.6567 | 4.436743 | 4.00e+00 | 5.60e+01 | 4.00e+00 | 2.32e+00 | 5.83e+00 | 2.32e+00 | 2.57e-03 | 3.60e-02 | 2.57e-03 | 1.40e+03 | 3.00e+01 | 1.80e+01 | 1.05e+01 | 4.95e+00 | 4.25e+00 | 9.00e-01 | 1.93e-02 | 1.16e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 100553725 | 100572245 | ENSMUSG00000029322 | 0.4460 | - | Plac8 | protein_coding | 3.39e-09 | 1.31e-05 | 12.3478 | 3.626185 | 7.00e+00 | 7.00e+00 | 2.36e+02 | 3.00e+00 | 3.00e+00 | 7.89e+00 | 1.85e-03 | 1.85e-03 | 6.24e-02 | 6.36e+02 | 2.34e+03 | 1.42e+02 | 9.32e+00 | 1.12e+01 | 7.16e+00 | 1.68e-01 | 6.20e-01 | 3.75e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 22126727 | 22135711 | ENSMUSG00000001348 | 0.5233 | - | Acp5 | protein_coding | 1.27e-08 | 4.07e-05 | 20.4857 | 4.356546 | 6.00e+00 | 2.30e+01 | 3.00e+00 | 2.81e+00 | 4.58e+00 | 2.00e+00 | 2.14e-03 | 8.21e-03 | 1.07e-03 | 6.77e+02 | 1.70e+01 | 2.00e+01 | 9.41e+00 | 4.17e+00 | 4.39e+00 | 2.42e-01 | 6.07e-03 | 7.14e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127296260 | 127335138 | ENSMUSG00000030830 | 0.4953 | + | Itgal | protein_coding | 2.93e-08 | 8.07e-05 | 22.1400 | 4.468583 | 4.00e+00 | 3.40e+01 | 9.00e+00 | 2.32e+00 | 5.13e+00 | 3.32e+00 | 6.60e-04 | 5.61e-03 | 1.48e-03 | 1.07e+03 | 1.00e+01 | 2.70e+01 | 1.01e+01 | 3.46e+00 | 4.81e+00 | 1.76e-01 | 1.65e-03 | 4.45e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 35199381 | 35202007 | ENSMUSG00000024401 | 0.5230 | - | Tnf | protein_coding | 5.59e-08 | 1.35e-04 | 30.4167 | 4.926790 | 1.00e+00 | 8.00e+00 | 0.00e+00 | 1.00e+00 | 3.17e+00 | 0.00e+00 | 4.96e-04 | 3.96e-03 | 0.00e+00 | 3.32e+02 | 2.50e+01 | 5.00e+00 | 8.38e+00 | 4.70e+00 | 2.58e+00 | 1.65e-01 | 1.24e-02 | 2.48e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 74375195 | 74386062 | ENSMUSG00000026177 | 0.5207 | + | Slc11a1 | protein_coding | 1.11e-07 | 2.38e-04 | 19.7812 | 4.306062 | 1.00e+00 | 2.50e+01 | 3.00e+00 | 1.00e+00 | 4.70e+00 | 2.00e+00 | 1.07e-04 | 2.68e-03 | 3.21e-04 | 5.97e+02 | 8.00e+00 | 2.50e+01 | 9.22e+00 | 3.17e+00 | 4.70e+00 | 6.40e-02 | 8.57e-04 | 2.68e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 89199209 | 89207827 | ENSMUSG00000089929 | 0.3732 | + | Bcl2a1b | protein_coding | 2.23e-07 | 4.19e-04 | 26.0714 | 4.704398 | 1.00e+00 | 9.00e+00 | 1.00e+00 | 1.00e+00 | 3.32e+00 | 1.00e+00 | 7.14e-04 | 6.42e-03 | 7.14e-04 | 3.40e+02 | 1.00e+00 | 2.10e+01 | 8.41e+00 | 1.00e+00 | 4.46e+00 | 2.43e-01 | 7.14e-04 | 1.50e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 97975602 | 98004695 | ENSMUSG00000022483 | 0.5486 | - | Col2a1 | protein_coding | 2.40e-07 | 4.19e-04 | 0.0493 | -4.342392 | 9.00e+00 | 1.30e+02 | 0.00e+00 | 3.32e+00 | 7.03e+00 | 0.00e+00 | 1.08e-03 | 1.56e-02 | 0.00e+00 | 2.00e+00 | 1.00e+00 | 1.00e+00 | 1.58e+00 | 1.00e+00 | 1.00e+00 | 2.40e-04 | 1.20e-04 | 1.20e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 115450311 | 115587780 | ENSMUSG00000020140 | 0.4222 | - | Lgr5 | protein_coding | 4.14e-07 | 6.64e-04 | 0.0610 | -4.035624 | 4.00e+00 | 7.20e+01 | 3.00e+00 | 2.32e+00 | 6.19e+00 | 2.00e+00 | 4.34e-04 | 7.80e-03 | 3.25e-04 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.08e-04 | 0.00e+00 | 1.08e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 134082448 | 134095082 | ENSMUSG00000000682 | 0.4953 | - | Cd52 | protein_coding | 6.10e-07 | 9.04e-04 | 12.6981 | 3.666535 | 3.60e+01 | 5.58e+02 | 1.90e+01 | 5.21e+00 | 9.13e+00 | 4.32e+00 | 9.11e-03 | 1.41e-01 | 4.81e-03 | 7.64e+03 | 6.50e+01 | 1.19e+02 | 1.29e+01 | 6.04e+00 | 6.91e+00 | 1.93e+00 | 1.64e-02 | 3.01e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 78559169 | 78572783 | ENSMUSG00000033220 | 0.5340 | - | Rac2 | protein_coding | 9.97e-07 | 1.37e-03 | 12.2553 | 3.615336 | 8.00e+00 | 7.50e+01 | 8.00e+00 | 3.17e+00 | 6.25e+00 | 3.17e+00 | 1.75e-03 | 1.64e-02 | 1.75e-03 | 1.09e+03 | 2.00e+01 | 3.50e+01 | 1.01e+01 | 4.39e+00 | 5.17e+00 | 2.39e-01 | 4.37e-03 | 7.66e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 108670603 | 108671397 | ENSMUSG00000059751 | 0.4704 | + | Rps3a3 | processed_pseudogene | 1.55e-06 | 1.93e-03 | 0.1393 | -2.843414 | 1.65e+03 | 9.00e+01 | 8.20e+01 | 1.07e+01 | 6.51e+00 | 6.38e+00 | 1.31e+00 | 7.18e-02 | 6.54e-02 | 5.10e+01 | 1.03e+02 | 9.70e+01 | 5.70e+00 | 6.70e+00 | 6.61e+00 | 4.07e-02 | 8.21e-02 | 7.74e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 92346638 | 92348889 | ENSMUSG00000034855 | 0.4720 | - | Cxcl10 | protein_coding | 1.64e-06 | 1.93e-03 | 10.2000 | 3.350497 | 4.00e+00 | 6.00e+00 | 1.20e+01 | 2.32e+00 | 2.81e+00 | 3.70e+00 | 1.53e-03 | 2.29e-03 | 4.59e-03 | 1.16e+02 | 1.15e+02 | 2.10e+01 | 6.87e+00 | 6.86e+00 | 4.46e+00 | 4.43e-02 | 4.39e-02 | 8.02e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 43583216 | 43584494 | ENSMUSG00000078719 | 0.5465 | - | Msmp | protein_coding | 1.70e-06 | 1.93e-03 | 0.0429 | -4.544321 | 1.00e+00 | 6.60e+01 | 0.00e+00 | 1.00e+00 | 6.07e+00 | 0.00e+00 | 7.40e-04 | 4.89e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 152008803 | 152017680 | ENSMUSG00000073700 | 0.5585 | + | Klhl21 | protein_coding | 2.85e-06 | 3.05e-03 | 8.7053 | 3.121894 | 1.31e+02 | 1.84e+02 | 2.86e+02 | 7.04e+00 | 7.53e+00 | 8.16e+00 | 3.96e-02 | 5.57e-02 | 8.65e-02 | 4.82e+03 | 1.67e+02 | 2.70e+02 | 1.22e+01 | 7.39e+00 | 8.08e+00 | 1.46e+00 | 5.05e-02 | 8.17e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 26442753 | 26456452 | ENSMUSG00000020641 | 0.4351 | - | Rsad2 | protein_coding | 3.18e-06 | 3.22e-03 | 8.7037 | 3.121629 | 9.00e+00 | 3.10e+01 | 3.80e+01 | 3.32e+00 | 5.00e+00 | 5.29e+00 | 9.96e-04 | 3.43e-03 | 4.20e-03 | 3.10e+02 | 3.36e+02 | 5.60e+01 | 8.28e+00 | 8.40e+00 | 5.83e+00 | 3.43e-02 | 3.72e-02 | 6.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 88278085 | 88310888 | ENSMUSG00000030560 | 0.3804 | + | Ctsc | protein_coding | 3.39e-06 | 3.26e-03 | 14.6579 | 3.873606 | 5.00e+00 | 2.50e+01 | 5.00e+00 | 2.58e+00 | 4.70e+00 | 2.58e+00 | 5.00e-04 | 2.50e-03 | 5.00e-04 | 4.80e+02 | 5.90e+01 | 1.50e+01 | 8.91e+00 | 5.91e+00 | 4.00e+00 | 4.80e-02 | 5.90e-03 | 1.50e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 120102353 | 120120992 | ENSMUSG00000030917 | 0.4573 | + | Tmem159 | protein_coding | 3.81e-06 | 3.50e-03 | 6.0146 | 2.588460 | 5.90e+01 | 4.70e+01 | 9.70e+01 | 5.91e+00 | 5.58e+00 | 6.61e+00 | 1.31e-02 | 1.04e-02 | 2.16e-02 | 8.20e+01 | 8.40e+01 | 1.07e+03 | 6.38e+00 | 6.41e+00 | 1.01e+01 | 1.82e-02 | 1.87e-02 | 2.38e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 53677306 | 53867080 | ENSMUSG00000043639 | 0.4645 | + | Rbm20 | protein_coding | 4.03e-06 | 3.53e-03 | 0.0303 | -5.044394 | 1.00e+00 | 1.27e+02 | 1.00e+00 | 1.00e+00 | 7.00e+00 | 1.00e+00 | 1.12e-04 | 1.43e-02 | 1.12e-04 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.12e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83291699 | 83294632 | ENSMUSG00000093483 | 0.4277 | + | AA465934 | processed_transcript | 4.97e-06 | 4.16e-03 | 0.1217 | -3.038778 | 5.92e+02 | 1.90e+01 | 2.70e+01 | 9.21e+00 | 4.32e+00 | 4.81e+00 | 2.36e-01 | 7.57e-03 | 1.08e-02 | 1.20e+01 | 3.90e+01 | 2.40e+01 | 3.70e+00 | 5.32e+00 | 4.64e+00 | 4.78e-03 | 1.55e-02 | 9.56e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 40429570 | 40465415 | ENSMUSG00000026069 | 0.4155 | + | Il1rl1 | protein_coding | 5.34e-06 | 4.28e-03 | 0.0968 | -3.369234 | 1.10e+01 | 8.90e+01 | 2.07e+02 | 3.58e+00 | 6.49e+00 | 7.70e+00 | 1.30e-03 | 1.05e-02 | 2.45e-02 | 1.50e+01 | 3.00e+00 | 9.00e+00 | 4.00e+00 | 2.00e+00 | 3.32e+00 | 1.77e-03 | 3.55e-04 | 1.06e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 116633008 | 116673952 | ENSMUSG00000042129 | 0.4884 | - | Rassf4 | protein_coding | 6.03e-06 | 4.59e-03 | 11.0667 | 3.468149 | 5.00e+00 | 4.10e+01 | 1.10e+01 | 2.58e+00 | 5.39e+00 | 3.58e+00 | 4.22e-04 | 3.46e-03 | 9.29e-04 | 6.39e+02 | 1.00e+00 | 2.10e+01 | 9.32e+00 | 1.00e+00 | 4.46e+00 | 5.40e-02 | 8.45e-05 | 1.77e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 49057194 | 49064206 | ENSMUSG00000078921 | 0.4266 | - | Tgtp2 | protein_coding | 6.20e-06 | 4.59e-03 | 11.2812 | 3.495855 | 4.00e+00 | 5.00e+00 | 2.00e+01 | 2.32e+00 | 2.58e+00 | 4.39e+00 | 1.05e-03 | 1.31e-03 | 5.25e-03 | 1.11e+02 | 2.43e+02 | 4.00e+00 | 6.81e+00 | 7.93e+00 | 2.32e+00 | 2.91e-02 | 6.38e-02 | 1.05e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74668310 | 74671599 | ENSMUSG00000001819 | 0.4617 | + | Hoxd13 | protein_coding | 7.55e-06 | 5.39e-03 | 0.0833 | -3.584963 | 0.00e+00 | 4.40e+01 | 1.00e+00 | 0.00e+00 | 5.49e+00 | 1.00e+00 | 0.00e+00 | 1.62e-02 | 3.68e-04 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.68e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127132232 | 127137823 | ENSMUSG00000051457 | 0.5097 | - | Spn | protein_coding | 9.05e-06 | 6.22e-03 | 12.1562 | 3.603626 | 1.00e+01 | 4.30e+01 | 8.00e+00 | 3.46e+00 | 5.46e+00 | 3.17e+00 | 1.75e-03 | 7.52e-03 | 1.40e-03 | 7.33e+02 | 9.00e+00 | 3.30e+01 | 9.52e+00 | 3.32e+00 | 5.09e+00 | 1.28e-01 | 1.57e-03 | 5.77e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164940780 | 164955850 | ENSMUSG00000017737 | 0.5213 | + | Mmp9 | protein_coding | 1.00e-05 | 6.65e-03 | 10.0488 | 3.328949 | 1.00e+01 | 2.70e+01 | 1.00e+00 | 3.46e+00 | 4.81e+00 | 1.00e+00 | 2.12e-03 | 5.74e-03 | 2.12e-04 | 3.80e+02 | 1.40e+01 | 1.50e+01 | 8.57e+00 | 3.91e+00 | 4.00e+00 | 8.07e-02 | 2.97e-03 | 3.19e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 97447035 | 97462907 | ENSMUSG00000000386 | 0.4616 | - | Mx1 | protein_coding | 1.06e-05 | 6.79e-03 | 18.0000 | 4.169925 | 0.00e+00 | 0.00e+00 | 4.00e+00 | 0.00e+00 | 0.00e+00 | 2.32e+00 | 0.00e+00 | 0.00e+00 | 6.50e-04 | 1.11e+02 | 1.10e+01 | 1.00e+00 | 6.81e+00 | 3.58e+00 | 1.00e+00 | 1.80e-02 | 1.79e-03 | 1.62e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36934983 | 36963212 | ENSMUSG00000022831 | 0.4295 | + | Hcls1 | protein_coding | 1.12e-05 | 6.99e-03 | 11.0548 | 3.466600 | 2.00e+00 | 5.90e+01 | 9.00e+00 | 1.58e+00 | 5.91e+00 | 3.32e+00 | 2.59e-04 | 7.64e-03 | 1.17e-03 | 7.69e+02 | 1.50e+01 | 2.00e+01 | 9.59e+00 | 4.00e+00 | 4.39e+00 | 9.95e-02 | 1.94e-03 | 2.59e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 70373558 | 70382066 | ENSMUSG00000031849 | 0.5643 | + | Comp | protein_coding | 1.19e-05 | 7.19e-03 | 0.1340 | -2.899473 | 1.00e+01 | 7.20e+01 | 1.20e+01 | 3.46e+00 | 6.19e+00 | 3.70e+00 | 1.61e-03 | 1.16e-02 | 1.94e-03 | 7.00e+00 | 1.00e+00 | 2.00e+00 | 3.00e+00 | 1.00e+00 | 1.58e+00 | 1.13e-03 | 1.61e-04 | 3.23e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83647844 | 83649355 | ENSMUSG00000000982 | 0.4630 | - | Ccl3 | protein_coding | 1.26e-05 | 7.32e-03 | 10.3125 | 3.366322 | 2.00e+00 | 2.30e+01 | 4.00e+00 | 1.58e+00 | 4.58e+00 | 2.32e+00 | 1.20e-03 | 1.38e-02 | 2.41e-03 | 2.84e+02 | 2.60e+01 | 1.70e+01 | 8.15e+00 | 4.75e+00 | 4.17e+00 | 1.71e-01 | 1.56e-02 | 1.02e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 6506548 | 6520965 | ENSMUSG00000020437 | 0.5216 | - | Myo1g | protein_coding | 1.29e-05 | 7.32e-03 | 25.1429 | 4.652077 | 3.00e+00 | 1.00e+00 | 0.00e+00 | 2.00e+00 | 1.00e+00 | 0.00e+00 | 1.19e-04 | 3.97e-05 | 0.00e+00 | 1.67e+02 | 4.00e+00 | 2.00e+00 | 7.39e+00 | 2.32e+00 | 1.58e+00 | 6.63e-03 | 1.59e-04 | 7.95e-05 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 104435118 | 104441050 | ENSMUSG00000029304 | 0.3787 | + | Spp1 | protein_coding | 1.49e-05 | 8.22e-03 | 0.1710 | -2.548304 | 1.40e+01 | 4.90e+02 | 3.70e+01 | 3.91e+00 | 8.94e+00 | 5.25e+00 | 3.31e-03 | 1.16e-01 | 8.74e-03 | 5.00e+01 | 2.60e+01 | 1.40e+01 | 5.67e+00 | 4.75e+00 | 3.91e+00 | 1.18e-02 | 6.14e-03 | 3.31e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52244393 | 52249799 | ENSMUSG00000086427 | 0.5302 | + | Hoxa11os | processed_transcript | 1.57e-05 | 8.41e-03 | 0.1250 | -3.000000 | 2.00e+00 | 3.50e+01 | 0.00e+00 | 1.58e+00 | 5.17e+00 | 0.00e+00 | 7.88e-04 | 1.38e-02 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 7.88e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 123229843 | 123247021 | ENSMUSG00000023349 | 0.3844 | + | Clec4n | protein_coding | 1.94e-05 | 9.94e-03 | 8.0839 | 3.015054 | 5.00e+00 | 1.18e+02 | 1.70e+01 | 2.58e+00 | 6.89e+00 | 4.17e+00 | 7.66e-04 | 1.81e-02 | 2.61e-03 | 1.01e+03 | 5.10e+01 | 9.10e+01 | 9.98e+00 | 5.70e+00 | 6.52e+00 | 1.55e-01 | 7.82e-03 | 1.39e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 171229572 | 171234365 | ENSMUSG00000058715 | 0.4864 | - | Fcer1g | protein_coding | 1.96e-05 | 9.94e-03 | 8.8516 | 3.145932 | 4.00e+00 | 1.14e+02 | 7.00e+00 | 2.32e+00 | 6.85e+00 | 3.00e+00 | 1.40e-03 | 3.99e-02 | 2.45e-03 | 1.07e+03 | 2.00e+01 | 4.00e+01 | 1.01e+01 | 4.39e+00 | 5.36e+00 | 3.75e-01 | 7.00e-03 | 1.40e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group5_vs_group6.Download the whole result list for group5_vs_group6.DEG table for the contrast group5_vs_group7The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group5_vs_group7. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group5_vs_group7 | log2_normalized_fold_change_group5_vs_group7 | natural_normalized_counts_12_Wt_1_VICs | natural_normalized_counts_13_Wt_2_VICs | natural_normalized_counts_14_Wt_3_VICs | log2_normalized_counts_12_Wt_1_VICs | log2_normalized_counts_13_Wt_2_VICs | log2_normalized_counts_14_Wt_3_VICs | rpgm_normalized_counts_12_Wt_1_VICs | rpgm_normalized_counts_13_Wt_2_VICs | rpgm_normalized_counts_14_Wt_3_VICs | natural_normalized_counts_18_TNF_DeltaARE_1_VICs | natural_normalized_counts_19_TNF_DeltaARE_2_VICs | natural_normalized_counts_20_TNF_DeltaARE_3_VICs | log2_normalized_counts_18_TNF_DeltaARE_1_VICs | log2_normalized_counts_19_TNF_DeltaARE_2_VICs | log2_normalized_counts_20_TNF_DeltaARE_3_VICs | rpgm_normalized_counts_18_TNF_DeltaARE_1_VICs | rpgm_normalized_counts_19_TNF_DeltaARE_2_VICs | rpgm_normalized_counts_20_TNF_DeltaARE_3_VICs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr1 | 153740349 | 153745468 | ENSMUSG00000026475 | 0.5045 | + | Rgs16 | protein_coding | 1.59e-11 | 3.06e-07 | 0.0271 | -5.207158 | 3.60e+01 | 4.80e+01 | 6.82e+03 | 5.21e+00 | 5.61e+00 | 1.27e+01 | 1.26e-02 | 1.67e-02 | 2.38e+00 | 7.80e+01 | 5.60e+01 | 5.00e+01 | 6.30e+00 | 5.83e+00 | 5.67e+00 | 2.72e-02 | 1.95e-02 | 1.74e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 43020811 | 43170818 | ENSMUSG00000051920 | 0.3829 | - | Rspo2 | protein_coding | 2.31e-10 | 2.22e-06 | 0.0531 | -4.234055 | 2.00e+00 | 1.98e+02 | 4.00e+00 | 1.58e+00 | 7.64e+00 | 2.32e+00 | 6.73e-04 | 6.67e-02 | 1.35e-03 | 5.00e+00 | 2.00e+00 | 1.00e+00 | 2.58e+00 | 1.58e+00 | 1.00e+00 | 1.68e-03 | 6.73e-04 | 3.37e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 133850980 | 133865577 | ENSMUSG00000031250 | 0.4123 | + | Tnmd | protein_coding | 3.93e-10 | 2.53e-06 | 0.0430 | -4.539159 | 4.00e+00 | 6.90e+01 | 1.70e+01 | 2.32e+00 | 6.13e+00 | 4.17e+00 | 2.81e-03 | 4.84e-02 | 1.19e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.01e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 97975602 | 98004695 | ENSMUSG00000022483 | 0.5486 | - | Col2a1 | protein_coding | 7.30e-09 | 3.52e-05 | 0.0423 | -4.564785 | 9.00e+00 | 1.30e+02 | 0.00e+00 | 3.32e+00 | 7.03e+00 | 0.00e+00 | 1.08e-03 | 1.56e-02 | 0.00e+00 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 3.61e-04 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 56477846 | 56690128 | ENSMUSG00000035258 | 0.3922 | + | Abi3bp | protein_coding | 1.88e-08 | 6.14e-05 | 0.0725 | -3.785102 | 2.00e+00 | 1.88e+02 | 0.00e+00 | 1.58e+00 | 7.56e+00 | 0.00e+00 | 8.57e-04 | 8.06e-02 | 0.00e+00 | 2.00e+00 | 7.00e+00 | 2.00e+00 | 1.58e+00 | 3.00e+00 | 1.58e+00 | 8.57e-04 | 3.00e-03 | 8.57e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 4133531 | 4138819 | ENSMUSG00000045573 | 0.4386 | - | Penk | protein_coding | 2.05e-08 | 6.14e-05 | 0.0724 | -3.788835 | 2.50e+01 | 6.35e+02 | 1.11e+02 | 4.70e+00 | 9.31e+00 | 6.81e+00 | 8.88e-03 | 2.25e-01 | 3.94e-02 | 1.10e+01 | 3.30e+01 | 9.00e+00 | 3.58e+00 | 5.09e+00 | 3.32e+00 | 3.91e-03 | 1.17e-02 | 3.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56117619 | 56120625 | ENSMUSG00000022156 | 0.4865 | - | Gzme | protein_coding | 2.23e-08 | 6.14e-05 | 0.0833 | -3.584963 | 5.00e+00 | 6.40e+01 | 0.00e+00 | 2.58e+00 | 6.02e+00 | 0.00e+00 | 3.67e-03 | 4.70e-02 | 0.00e+00 | 2.00e+00 | 1.00e+00 | 0.00e+00 | 1.58e+00 | 1.00e+00 | 0.00e+00 | 1.47e-03 | 7.35e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 62677826 | 62783982 | ENSMUSG00000032243 | 0.4998 | + | Itga11 | protein_coding | 4.89e-08 | 1.05e-04 | 0.0701 | -3.835189 | 1.10e+01 | 1.13e+02 | 3.00e+01 | 3.58e+00 | 6.83e+00 | 4.95e+00 | 2.90e-03 | 2.98e-02 | 7.91e-03 | 5.00e+00 | 2.00e+00 | 1.00e+00 | 2.58e+00 | 1.58e+00 | 1.00e+00 | 1.32e-03 | 5.28e-04 | 2.64e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 110279068 | 110281097 | ENSMUSG00000075707 | 0.5783 | + | Dio3 | protein_coding | 4.92e-08 | 1.05e-04 | 0.0971 | -3.363748 | 3.40e+01 | 3.01e+02 | 1.20e+01 | 5.13e+00 | 8.24e+00 | 3.70e+00 | 1.74e-02 | 1.54e-01 | 6.15e-03 | 2.50e+01 | 5.00e+00 | 1.00e+00 | 4.70e+00 | 2.58e+00 | 1.00e+00 | 1.28e-02 | 2.56e-03 | 5.13e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 92751590 | 92794818 | ENSMUSG00000021702 | 0.4601 | - | Thbs4 | protein_coding | 7.68e-08 | 1.48e-04 | 0.0936 | -3.417408 | 2.50e+01 | 1.62e+02 | 1.30e+01 | 4.70e+00 | 7.35e+00 | 3.81e+00 | 9.37e-03 | 6.07e-02 | 4.87e-03 | 1.30e+01 | 2.00e+00 | 1.00e+00 | 3.81e+00 | 1.58e+00 | 1.00e+00 | 4.87e-03 | 7.49e-04 | 3.75e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52244393 | 52249799 | ENSMUSG00000086427 | 0.5302 | + | Hoxa11os | processed_transcript | 1.08e-07 | 1.89e-04 | 0.0750 | -3.736966 | 2.00e+00 | 3.50e+01 | 0.00e+00 | 1.58e+00 | 5.17e+00 | 0.00e+00 | 7.88e-04 | 1.38e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 3000282 | 3038313 | ENSMUSG00000097312 | 0.3488 | - | Gm26870 | lincRNA | 1.73e-07 | 2.77e-04 | 17.1296 | 4.098422 | 1.40e+01 | 2.40e+01 | 1.30e+01 | 3.91e+00 | 4.64e+00 | 3.81e+00 | 3.72e-03 | 6.38e-03 | 3.46e-03 | 1.70e+01 | 2.72e+02 | 6.33e+02 | 4.17e+00 | 8.09e+00 | 9.31e+00 | 4.52e-03 | 7.23e-02 | 1.68e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 70373558 | 70382066 | ENSMUSG00000031849 | 0.5643 | + | Comp | protein_coding | 1.98e-07 | 2.93e-04 | 0.0928 | -3.429988 | 1.00e+01 | 7.20e+01 | 1.20e+01 | 3.46e+00 | 6.19e+00 | 3.70e+00 | 1.61e-03 | 1.16e-02 | 1.94e-03 | 2.00e+00 | 2.00e+00 | 2.00e+00 | 1.58e+00 | 1.58e+00 | 1.58e+00 | 3.23e-04 | 3.23e-04 | 3.23e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 127514939 | 127517152 | ENSMUSG00000040280 | 0.5664 | + | Ndufa4l2 | protein_coding | 3.77e-07 | 5.19e-04 | 0.0833 | -3.584963 | 2.00e+00 | 2.80e+01 | 3.00e+00 | 1.58e+00 | 4.86e+00 | 2.00e+00 | 1.05e-03 | 1.47e-02 | 1.57e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74668310 | 74671599 | ENSMUSG00000001819 | 0.4617 | + | Hoxd13 | protein_coding | 4.50e-07 | 5.61e-04 | 0.0833 | -3.584963 | 0.00e+00 | 4.40e+01 | 1.00e+00 | 0.00e+00 | 5.49e+00 | 1.00e+00 | 0.00e+00 | 1.62e-02 | 3.68e-04 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.68e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group5_vs_group7.Download the whole result list for group5_vs_group7.DEG table for the contrast group5_vs_group8The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group5_vs_group8. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group5_vs_group8 | log2_normalized_fold_change_group5_vs_group8 | natural_normalized_counts_12_Wt_1_VICs | natural_normalized_counts_13_Wt_2_VICs | natural_normalized_counts_14_Wt_3_VICs | log2_normalized_counts_12_Wt_1_VICs | log2_normalized_counts_13_Wt_2_VICs | log2_normalized_counts_14_Wt_3_VICs | rpgm_normalized_counts_12_Wt_1_VICs | rpgm_normalized_counts_13_Wt_2_VICs | rpgm_normalized_counts_14_Wt_3_VICs | natural_normalized_counts_21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs | natural_normalized_counts_22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs | natural_normalized_counts_23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs | log2_normalized_counts_21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs | log2_normalized_counts_22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs | log2_normalized_counts_23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs | rpgm_normalized_counts_21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs | rpgm_normalized_counts_22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs | rpgm_normalized_counts_23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr15 | 43020811 | 43170818 | ENSMUSG00000051920 | 0.3829 | - | Rspo2 | protein_coding | 1.87e-13 | 3.59e-09 | 0.0242 | -5.37156 | 2.00e+00 | 1.98e+02 | 4.00e+00 | 1.58e+00 | 7.64e+00 | 2.32e+00 | 6.73e-04 | 6.67e-02 | 1.35e-03 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 3.37e-04 | 3.37e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 153740349 | 153745468 | ENSMUSG00000026475 | 0.5045 | + | Rgs16 | protein_coding | 6.75e-12 | 6.49e-08 | 0.0263 | -5.24626 | 3.60e+01 | 4.80e+01 | 6.82e+03 | 5.21e+00 | 5.61e+00 | 1.27e+01 | 1.26e-02 | 1.67e-02 | 2.38e+00 | 4.10e+01 | 9.60e+01 | 4.20e+01 | 5.39e+00 | 6.60e+00 | 5.43e+00 | 1.43e-02 | 3.35e-02 | 1.46e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 4133531 | 4138819 | ENSMUSG00000045573 | 0.4386 | - | Penk | protein_coding | 1.51e-11 | 9.70e-08 | 0.0439 | -4.50873 | 2.50e+01 | 6.35e+02 | 1.11e+02 | 4.70e+00 | 9.31e+00 | 6.81e+00 | 8.88e-03 | 2.25e-01 | 3.94e-02 | 2.00e+00 | 4.00e+00 | 2.50e+01 | 1.58e+00 | 2.32e+00 | 4.70e+00 | 7.10e-04 | 1.42e-03 | 8.88e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 26442753 | 26456452 | ENSMUSG00000020641 | 0.4351 | - | Rsad2 | protein_coding | 2.12e-11 | 1.02e-07 | 21.7778 | 4.44478 | 9.00e+00 | 3.10e+01 | 3.80e+01 | 3.32e+00 | 5.00e+00 | 5.29e+00 | 9.96e-04 | 3.43e-03 | 4.20e-03 | 7.73e+02 | 8.29e+02 | 1.59e+02 | 9.60e+00 | 9.70e+00 | 7.32e+00 | 8.55e-02 | 9.17e-02 | 1.76e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 103460375 | 103483217 | ENSMUSG00000086503 | 0.4122 | - | Xist | lincRNA | 2.83e-10 | 1.09e-06 | 0.0205 | -5.60979 | 0.00e+00 | 1.80e+02 | 1.10e+02 | 0.00e+00 | 7.50e+00 | 6.79e+00 | 0.00e+00 | 6.82e-02 | 4.17e-02 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 1.00e+00 | 1.58e+00 | 0.00e+00 | 3.79e-04 | 7.58e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 56477846 | 56690128 | ENSMUSG00000035258 | 0.3922 | + | Abi3bp | protein_coding | 5.12e-09 | 1.64e-05 | 0.0725 | -3.78510 | 2.00e+00 | 1.88e+02 | 0.00e+00 | 1.58e+00 | 7.56e+00 | 0.00e+00 | 8.57e-04 | 8.06e-02 | 0.00e+00 | 2.00e+00 | 1.00e+00 | 8.00e+00 | 1.58e+00 | 1.00e+00 | 3.17e+00 | 8.57e-04 | 4.29e-04 | 3.43e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 60376029 | 60392627 | ENSMUSG00000054072 | 0.4020 | + | Iigp1 | protein_coding | 5.36e-08 | 1.33e-04 | 8.7865 | 3.13529 | 4.00e+00 | 2.00e+01 | 6.20e+01 | 2.32e+00 | 4.39e+00 | 5.98e+00 | 1.41e-03 | 7.07e-03 | 2.19e-02 | 3.01e+02 | 3.62e+02 | 1.16e+02 | 8.24e+00 | 8.50e+00 | 6.87e+00 | 1.06e-01 | 1.28e-01 | 4.10e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 97975602 | 98004695 | ENSMUSG00000022483 | 0.5486 | - | Col2a1 | protein_coding | 5.55e-08 | 1.33e-04 | 0.0423 | -4.56478 | 9.00e+00 | 1.30e+02 | 0.00e+00 | 3.32e+00 | 7.03e+00 | 0.00e+00 | 1.08e-03 | 1.56e-02 | 0.00e+00 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 1.00e+00 | 1.58e+00 | 0.00e+00 | 1.20e-04 | 2.40e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 35199381 | 35202007 | ENSMUSG00000024401 | 0.5230 | - | Tnf | protein_coding | 7.79e-08 | 1.67e-04 | 23.5833 | 4.55970 | 1.00e+00 | 8.00e+00 | 0.00e+00 | 1.00e+00 | 3.17e+00 | 0.00e+00 | 4.96e-04 | 3.96e-03 | 0.00e+00 | 3.80e+01 | 1.21e+02 | 1.21e+02 | 5.29e+00 | 6.93e+00 | 6.93e+00 | 1.88e-02 | 6.00e-02 | 6.00e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74668310 | 74671599 | ENSMUSG00000001819 | 0.4617 | + | Hoxd13 | protein_coding | 1.44e-07 | 2.77e-04 | 0.0625 | -4.00000 | 0.00e+00 | 4.40e+01 | 1.00e+00 | 0.00e+00 | 5.49e+00 | 1.00e+00 | 0.00e+00 | 1.62e-02 | 3.68e-04 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 92751590 | 92794818 | ENSMUSG00000021702 | 0.4601 | - | Thbs4 | protein_coding | 1.89e-07 | 3.30e-04 | 0.1034 | -3.27302 | 2.50e+01 | 1.62e+02 | 1.30e+01 | 4.70e+00 | 7.35e+00 | 3.81e+00 | 9.37e-03 | 6.07e-02 | 4.87e-03 | 0.00e+00 | 0.00e+00 | 1.80e+01 | 0.00e+00 | 0.00e+00 | 4.25e+00 | 0.00e+00 | 0.00e+00 | 6.74e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 133850980 | 133865577 | ENSMUSG00000031250 | 0.4123 | + | Tnmd | protein_coding | 2.86e-07 | 4.49e-04 | 0.0753 | -3.73180 | 4.00e+00 | 6.90e+01 | 1.70e+01 | 2.32e+00 | 6.13e+00 | 4.17e+00 | 2.81e-03 | 4.84e-02 | 1.19e-02 | 0.00e+00 | 2.00e+00 | 2.00e+00 | 0.00e+00 | 1.58e+00 | 1.58e+00 | 0.00e+00 | 1.40e-03 | 1.40e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52244393 | 52249799 | ENSMUSG00000086427 | 0.5302 | + | Hoxa11os | processed_transcript | 3.20e-07 | 4.49e-04 | 0.0750 | -3.73697 | 2.00e+00 | 3.50e+01 | 0.00e+00 | 1.58e+00 | 5.17e+00 | 0.00e+00 | 7.88e-04 | 1.38e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 34607970 | 34613401 | ENSMUSG00000062488 | 0.4273 | + | Ifit3b | protein_coding | 3.27e-07 | 4.49e-04 | 8.8709 | 3.14907 | 9.50e+01 | 7.50e+01 | 1.29e+02 | 6.58e+00 | 6.25e+00 | 7.02e+00 | 4.71e-02 | 3.72e-02 | 6.39e-02 | 1.29e+03 | 1.01e+03 | 3.74e+02 | 1.03e+01 | 9.99e+00 | 8.55e+00 | 6.39e-01 | 5.02e-01 | 1.85e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 101794656 | 101798642 | ENSMUSG00000046774 | 0.5398 | + | 8030474K03Rik | protein_coding | 5.37e-07 | 6.89e-04 | 48.3333 | 5.59495 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 5.00e+00 | 1.31e+02 | 6.00e+00 | 2.58e+00 | 7.04e+00 | 2.81e+00 | 1.43e-03 | 3.73e-02 | 1.71e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 92346638 | 92348889 | ENSMUSG00000034855 | 0.4720 | - | Cxcl10 | protein_coding | 7.39e-07 | 8.90e-04 | 9.0000 | 3.16993 | 4.00e+00 | 6.00e+00 | 1.20e+01 | 2.32e+00 | 2.81e+00 | 3.70e+00 | 1.53e-03 | 2.29e-03 | 4.59e-03 | 5.20e+01 | 1.31e+02 | 3.90e+01 | 5.73e+00 | 7.04e+00 | 5.32e+00 | 1.99e-02 | 5.01e-02 | 1.49e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 142493978 | 142522344 | ENSMUSG00000105504 | 0.4252 | + | Gbp5 | protein_coding | 1.27e-06 | 1.44e-03 | 9.5172 | 3.25054 | 6.00e+00 | 3.00e+01 | 1.90e+01 | 2.81e+00 | 4.95e+00 | 4.32e+00 | 9.26e-04 | 4.63e-03 | 2.93e-03 | 2.52e+02 | 2.74e+02 | 2.30e+01 | 7.98e+00 | 8.10e+00 | 4.58e+00 | 3.89e-02 | 4.23e-02 | 3.55e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 65265180 | 65280605 | ENSMUSG00000042254 | 0.4935 | + | Cilp | protein_coding | 1.38e-06 | 1.47e-03 | 0.0857 | -3.54432 | 2.00e+00 | 2.90e+01 | 1.00e+00 | 1.58e+00 | 4.91e+00 | 1.00e+00 | 1.80e-04 | 2.61e-03 | 9.01e-05 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83002158 | 83020810 | ENSMUSG00000035208 | 0.4404 | - | Slfn8 | protein_coding | 1.77e-06 | 1.79e-03 | 10.7391 | 3.42481 | 1.00e+00 | 6.00e+00 | 1.30e+01 | 1.00e+00 | 2.81e+00 | 3.81e+00 | 3.17e-04 | 1.90e-03 | 4.12e-03 | 1.15e+02 | 9.60e+01 | 3.30e+01 | 6.86e+00 | 6.60e+00 | 5.09e+00 | 3.65e-02 | 3.04e-02 | 1.05e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 156199424 | 156200818 | ENSMUSG00000035692 | 0.5068 | - | Isg15 | protein_coding | 2.35e-06 | 2.26e-03 | 7.2271 | 2.85343 | 2.10e+02 | 4.99e+02 | 1.50e+03 | 7.72e+00 | 8.97e+00 | 1.05e+01 | 1.49e-01 | 3.53e-01 | 1.06e+00 | 8.16e+03 | 6.48e+03 | 1.34e+03 | 1.30e+01 | 1.27e+01 | 1.04e+01 | 5.77e+00 | 4.58e+00 | 9.44e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 34640871 | 34650009 | ENSMUSG00000034459 | 0.4291 | + | Ifit1 | protein_coding | 3.63e-06 | 3.32e-03 | 5.9536 | 2.57376 | 5.50e+01 | 1.22e+02 | 3.37e+02 | 5.81e+00 | 6.94e+00 | 8.40e+00 | 2.29e-02 | 5.07e-02 | 1.40e-01 | 1.32e+03 | 1.22e+03 | 5.31e+02 | 1.04e+01 | 1.03e+01 | 9.06e+00 | 5.49e-01 | 5.08e-01 | 2.21e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74679557 | 74687016 | ENSMUSG00000042499 | 0.5307 | + | Hoxd11 | protein_coding | 3.82e-06 | 3.34e-03 | 0.0811 | -3.62449 | 0.00e+00 | 3.40e+01 | 0.00e+00 | 0.00e+00 | 5.13e+00 | 0.00e+00 | 0.00e+00 | 1.34e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group5_vs_group8.Download the whole result list for group5_vs_group8.DEG table for the contrast group7_vs_group8The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group7_vs_group8. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group7_vs_group8 | log2_normalized_fold_change_group7_vs_group8 | natural_normalized_counts_18_TNF_DeltaARE_1_VICs | natural_normalized_counts_19_TNF_DeltaARE_2_VICs | natural_normalized_counts_20_TNF_DeltaARE_3_VICs | log2_normalized_counts_18_TNF_DeltaARE_1_VICs | log2_normalized_counts_19_TNF_DeltaARE_2_VICs | log2_normalized_counts_20_TNF_DeltaARE_3_VICs | rpgm_normalized_counts_18_TNF_DeltaARE_1_VICs | rpgm_normalized_counts_19_TNF_DeltaARE_2_VICs | rpgm_normalized_counts_20_TNF_DeltaARE_3_VICs | natural_normalized_counts_21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs | natural_normalized_counts_22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs | natural_normalized_counts_23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs | log2_normalized_counts_21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs | log2_normalized_counts_22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs | log2_normalized_counts_23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs | rpgm_normalized_counts_21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs | rpgm_normalized_counts_22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs | rpgm_normalized_counts_23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr2 | 165405028 | 165473230 | ENSMUSG00000018459 | 0.5038 | - | Slc13a3 | protein_coding | 3.90e-12 | 7.50e-08 | 25.5641 | 4.676047 | 3.30e+01 | 2.00e+00 | 1.00e+00 | 5.09e+00 | 1.58e+00 | 1.00e+00 | 6.07e-03 | 3.68e-04 | 1.84e-04 | 1.68e+02 | 5.97e+02 | 2.29e+02 | 7.40e+00 | 9.22e+00 | 7.85e+00 | 3.09e-02 | 1.10e-01 | 4.21e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 103460375 | 103483217 | ENSMUSG00000086503 | 0.4122 | - | Xist | lincRNA | 1.07e-11 | 1.03e-07 | 0.0179 | -5.803055 | 0.00e+00 | 3.31e+02 | 1.00e+00 | 0.00e+00 | 8.38e+00 | 1.00e+00 | 0.00e+00 | 1.25e-01 | 3.79e-04 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 1.00e+00 | 1.58e+00 | 0.00e+00 | 3.79e-04 | 7.58e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 134082448 | 134095082 | ENSMUSG00000000682 | 0.4953 | - | Cd52 | protein_coding | 3.11e-09 | 2.00e-05 | 12.0387 | 3.589612 | 2.70e+02 | 5.00e+00 | 6.00e+00 | 8.08e+00 | 2.58e+00 | 2.81e+00 | 6.83e-02 | 1.26e-03 | 1.52e-03 | 7.01e+02 | 1.28e+03 | 1.44e+03 | 9.46e+00 | 1.03e+01 | 1.05e+01 | 1.77e-01 | 3.24e-01 | 3.63e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 26442753 | 26456452 | ENSMUSG00000020641 | 0.4351 | - | Rsad2 | protein_coding | 3.40e-08 | 1.55e-04 | 10.8221 | 3.435907 | 8.80e+01 | 4.90e+01 | 2.30e+01 | 6.48e+00 | 5.64e+00 | 4.58e+00 | 9.74e-03 | 5.42e-03 | 2.54e-03 | 7.73e+02 | 8.29e+02 | 1.59e+02 | 9.60e+00 | 9.70e+00 | 7.32e+00 | 8.55e-02 | 9.17e-02 | 1.76e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 122921848 | 122934619 | ENSMUSG00000049037 | 0.4108 | + | Clec4a1 | protein_coding | 4.04e-08 | 1.55e-04 | 10.6567 | 3.413691 | 6.10e+01 | 1.00e+00 | 2.00e+00 | 5.95e+00 | 1.00e+00 | 1.58e+00 | 3.13e-02 | 5.13e-04 | 1.03e-03 | 1.43e+02 | 2.62e+02 | 3.06e+02 | 7.17e+00 | 8.04e+00 | 8.26e+00 | 7.34e-02 | 1.34e-01 | 1.57e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 35170991 | 35176068 | ENSMUSG00000024397 | 0.5228 | - | Aif1 | protein_coding | 4.99e-08 | 1.60e-04 | 9.8974 | 3.307055 | 1.10e+02 | 0.00e+00 | 4.00e+00 | 6.79e+00 | 0.00e+00 | 2.32e+00 | 2.84e-02 | 0.00e+00 | 1.03e-03 | 2.80e+02 | 3.06e+02 | 5.69e+02 | 8.13e+00 | 8.26e+00 | 9.15e+00 | 7.22e-02 | 7.89e-02 | 1.47e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83647844 | 83649355 | ENSMUSG00000000982 | 0.4630 | - | Ccl3 | protein_coding | 1.47e-07 | 4.04e-04 | 10.6923 | 3.418501 | 2.20e+01 | 1.00e+00 | 0.00e+00 | 4.52e+00 | 1.00e+00 | 0.00e+00 | 1.32e-02 | 6.01e-04 | 0.00e+00 | 2.70e+01 | 9.60e+01 | 1.52e+02 | 4.81e+00 | 6.60e+00 | 7.26e+00 | 1.62e-02 | 5.77e-02 | 9.14e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 142493978 | 142522344 | ENSMUSG00000105504 | 0.4252 | + | Gbp5 | protein_coding | 2.67e-07 | 6.43e-04 | 10.8235 | 3.436099 | 2.30e+01 | 1.80e+01 | 7.00e+00 | 4.58e+00 | 4.25e+00 | 3.00e+00 | 3.55e-03 | 2.78e-03 | 1.08e-03 | 2.52e+02 | 2.74e+02 | 2.30e+01 | 7.98e+00 | 8.10e+00 | 4.58e+00 | 3.89e-02 | 4.23e-02 | 3.55e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 78559169 | 78572783 | ENSMUSG00000033220 | 0.5340 | - | Rac2 | protein_coding | 9.23e-07 | 1.79e-03 | 7.8750 | 2.977280 | 5.80e+01 | 1.00e+00 | 2.00e+00 | 5.88e+00 | 1.00e+00 | 1.58e+00 | 1.27e-02 | 2.19e-04 | 4.37e-04 | 5.60e+01 | 1.51e+02 | 2.94e+02 | 5.83e+00 | 7.25e+00 | 8.20e+00 | 1.22e-02 | 3.30e-02 | 6.43e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 136895917 | 136898803 | ENSMUSG00000036887 | 0.5535 | - | C1qa | protein_coding | 9.30e-07 | 1.79e-03 | 9.3617 | 3.226771 | 4.00e+01 | 1.00e+00 | 3.00e+00 | 5.36e+00 | 1.00e+00 | 2.00e+00 | 2.68e-02 | 6.71e-04 | 2.01e-03 | 1.22e+02 | 1.63e+02 | 1.52e+02 | 6.94e+00 | 7.36e+00 | 7.26e+00 | 8.18e-02 | 1.09e-01 | 1.02e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 87250758 | 87263738 | ENSMUSG00000015852 | 0.4453 | - | Fcrls | protein_coding | 1.24e-06 | 2.18e-03 | 15.5833 | 3.961932 | 6.00e+00 | 2.00e+00 | 1.00e+00 | 2.81e+00 | 1.58e+00 | 1.00e+00 | 1.92e-03 | 6.40e-04 | 3.20e-04 | 3.00e+01 | 3.10e+01 | 1.23e+02 | 4.95e+00 | 5.00e+00 | 6.95e+00 | 9.59e-03 | 9.91e-03 | 3.93e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83587882 | 83593087 | ENSMUSG00000018927 | 0.4368 | - | Ccl6 | protein_coding | 2.34e-06 | 3.75e-03 | 6.7442 | 2.753644 | 3.40e+01 | 5.00e+00 | 1.00e+00 | 5.13e+00 | 2.58e+00 | 1.00e+00 | 9.85e-03 | 1.45e-03 | 2.90e-04 | 6.60e+01 | 1.86e+02 | 3.50e+01 | 6.07e+00 | 7.55e+00 | 5.17e+00 | 1.91e-02 | 5.39e-02 | 1.01e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 123106428 | 123143999 | ENSMUSG00000030148 | 0.3919 | + | Clec4a2 | protein_coding | 3.82e-06 | 5.66e-03 | 9.5926 | 3.261921 | 2.20e+01 | 1.00e+00 | 1.00e+00 | 4.52e+00 | 1.00e+00 | 1.00e+00 | 4.19e-03 | 1.90e-04 | 1.90e-04 | 5.90e+01 | 8.80e+01 | 1.09e+02 | 5.91e+00 | 6.48e+00 | 6.78e+00 | 1.12e-02 | 1.67e-02 | 2.07e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 60376029 | 60392627 | ENSMUSG00000054072 | 0.4020 | + | Iigp1 | protein_coding | 4.21e-06 | 5.68e-03 | 6.2560 | 2.645241 | 8.90e+01 | 1.90e+01 | 1.40e+01 | 6.49e+00 | 4.32e+00 | 3.91e+00 | 3.15e-02 | 6.72e-03 | 4.95e-03 | 3.01e+02 | 3.62e+02 | 1.16e+02 | 8.24e+00 | 8.50e+00 | 6.87e+00 | 1.06e-01 | 1.28e-01 | 4.10e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 78182774 | 78209349 | ENSMUSG00000032348 | 0.4409 | + | Gsta4 | protein_coding | 4.42e-06 | 5.68e-03 | 0.0789 | -3.662965 | 2.30e+01 | 2.30e+01 | 2.70e+01 | 4.58e+00 | 4.58e+00 | 4.81e+00 | 8.59e-03 | 8.59e-03 | 1.01e-02 | 0.00e+00 | 0.00e+00 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.12e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 3000282 | 3038313 | ENSMUSG00000097312 | 0.3488 | - | Gm26870 | lincRNA | 6.21e-06 | 7.47e-03 | 0.1135 | -3.139064 | 1.70e+01 | 2.72e+02 | 6.33e+02 | 4.17e+00 | 8.09e+00 | 9.31e+00 | 4.52e-03 | 7.23e-02 | 1.68e-01 | 1.50e+01 | 1.00e+01 | 7.70e+01 | 4.00e+00 | 3.46e+00 | 6.29e+00 | 3.99e-03 | 2.66e-03 | 2.05e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 122288751 | 122634402 | ENSMUSG00000052889 | 0.4577 | + | Prkcb | protein_coding | 6.89e-06 | 7.81e-03 | 7.3636 | 2.880418 | 6.20e+01 | 1.30e+01 | 1.00e+01 | 5.98e+00 | 3.81e+00 | 3.46e+00 | 7.98e-03 | 1.67e-03 | 1.29e-03 | 7.70e+01 | 1.55e+02 | 4.13e+02 | 6.29e+00 | 7.29e+00 | 8.69e+00 | 9.91e-03 | 2.00e-02 | 5.32e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52242106 | 52245810 | ENSMUSG00000038210 | 0.5282 | - | Hoxa11 | protein_coding | 7.88e-06 | 8.43e-03 | 9.8000 | 3.292782 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 7.97e-04 | 0.00e+00 | 5.00e+00 | 4.10e+01 | 0.00e+00 | 2.58e+00 | 5.39e+00 | 0.00e+00 | 1.99e-03 | 1.63e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 43446462 | 43454628 | ENSMUSG00000028459 | 0.5155 | - | Cd72 | protein_coding | 9.37e-06 | 9.01e-03 | 6.2568 | 2.645415 | 7.10e+01 | 0.00e+00 | 0.00e+00 | 6.17e+00 | 0.00e+00 | 0.00e+00 | 9.33e-03 | 0.00e+00 | 0.00e+00 | 8.10e+01 | 1.59e+02 | 2.20e+02 | 6.36e+00 | 7.32e+00 | 7.79e+00 | 1.06e-02 | 2.09e-02 | 2.89e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 23411502 | 23449632 | ENSMUSG00000031548 | 0.4776 | + | Sfrp1 | protein_coding | 9.56e-06 | 9.01e-03 | 6.9501 | 2.797030 | 4.76e+02 | 3.62e+02 | 3.61e+02 | 8.90e+00 | 8.50e+00 | 8.50e+00 | 1.08e-01 | 8.23e-02 | 8.21e-02 | 4.69e+03 | 2.11e+03 | 1.55e+03 | 1.22e+01 | 1.10e+01 | 1.06e+01 | 1.07e+00 | 4.79e-01 | 3.53e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 123229843 | 123247021 | ENSMUSG00000023349 | 0.3844 | + | Clec4n | protein_coding | 9.83e-06 | 9.01e-03 | 5.6280 | 2.492627 | 2.00e+02 | 1.00e+00 | 3.00e+00 | 7.65e+00 | 1.00e+00 | 2.00e+00 | 3.07e-02 | 1.53e-04 | 4.60e-04 | 1.88e+02 | 4.31e+02 | 5.43e+02 | 7.56e+00 | 8.75e+00 | 9.09e+00 | 2.88e-02 | 6.61e-02 | 8.32e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 120474538 | 120505024 | ENSMUSG00000026390 | 0.4694 | - | Marco | protein_coding | 1.08e-05 | 9.44e-03 | 5.3229 | 2.412217 | 2.77e+02 | 7.00e+00 | 1.00e+00 | 8.12e+00 | 3.00e+00 | 1.00e+00 | 1.05e-01 | 2.66e-03 | 3.80e-04 | 3.00e+02 | 7.73e+02 | 4.57e+02 | 8.23e+00 | 9.60e+00 | 8.84e+00 | 1.14e-01 | 2.94e-01 | 1.74e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 35199381 | 35202007 | ENSMUSG00000024401 | 0.5230 | - | Tnf | protein_coding | 1.28e-05 | 1.06e-02 | 8.8438 | 3.144658 | 2.60e+01 | 2.00e+00 | 1.00e+00 | 4.75e+00 | 1.58e+00 | 1.00e+00 | 1.29e-02 | 9.91e-04 | 4.96e-04 | 3.80e+01 | 1.21e+02 | 1.21e+02 | 5.29e+00 | 6.93e+00 | 6.93e+00 | 1.88e-02 | 6.00e-02 | 6.00e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 139678178 | 139758581 | ENSMUSG00000074766 | 0.4173 | + | Ism1 | protein_coding | 1.32e-05 | 1.06e-02 | 5.6412 | 2.496008 | 7.30e+01 | 1.50e+01 | 4.00e+01 | 6.21e+00 | 4.00e+00 | 5.36e+00 | 3.12e-02 | 6.41e-03 | 1.71e-02 | 4.68e+02 | 1.37e+02 | 1.31e+02 | 8.87e+00 | 7.11e+00 | 7.04e+00 | 2.00e-01 | 5.85e-02 | 5.60e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 129342691 | 129365303 | ENSMUSG00000053063 | 0.3896 | + | Clec12a | protein_coding | 1.55e-05 | 1.20e-02 | 8.8889 | 3.152003 | 5.00e+00 | 1.00e+00 | 0.00e+00 | 2.58e+00 | 1.00e+00 | 0.00e+00 | 9.99e-04 | 2.00e-04 | 0.00e+00 | 6.00e+00 | 2.50e+01 | 4.60e+01 | 2.81e+00 | 4.70e+00 | 5.55e+00 | 1.20e-03 | 5.00e-03 | 9.19e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 111471661 | 111779977 | ENSMUSG00000038296 | 0.4605 | - | Galnt18 | protein_coding | 1.91e-05 | 1.41e-02 | 0.1696 | -2.560216 | 2.55e+02 | 1.20e+03 | 1.14e+03 | 8.00e+00 | 1.02e+01 | 1.02e+01 | 1.67e-01 | 7.84e-01 | 7.47e-01 | 1.06e+02 | 2.71e+02 | 6.10e+01 | 6.74e+00 | 8.09e+00 | 5.95e+00 | 6.93e-02 | 1.77e-01 | 3.99e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group7_vs_group8.Download the whole result list for group7_vs_group8.DEG table for the contrast group6_vs_group7The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group6_vs_group7. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group6_vs_group7 | log2_normalized_fold_change_group6_vs_group7 | natural_normalized_counts_15_Tg197_1_VICs | natural_normalized_counts_16_Tg197_2_VICs | natural_normalized_counts_17_Tg197_3_VICs | log2_normalized_counts_15_Tg197_1_VICs | log2_normalized_counts_16_Tg197_2_VICs | log2_normalized_counts_17_Tg197_3_VICs | rpgm_normalized_counts_15_Tg197_1_VICs | rpgm_normalized_counts_16_Tg197_2_VICs | rpgm_normalized_counts_17_Tg197_3_VICs | natural_normalized_counts_18_TNF_DeltaARE_1_VICs | natural_normalized_counts_19_TNF_DeltaARE_2_VICs | natural_normalized_counts_20_TNF_DeltaARE_3_VICs | log2_normalized_counts_18_TNF_DeltaARE_1_VICs | log2_normalized_counts_19_TNF_DeltaARE_2_VICs | log2_normalized_counts_20_TNF_DeltaARE_3_VICs | rpgm_normalized_counts_18_TNF_DeltaARE_1_VICs | rpgm_normalized_counts_19_TNF_DeltaARE_2_VICs | rpgm_normalized_counts_20_TNF_DeltaARE_3_VICs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr13 | 92751590 | 92794818 | ENSMUSG00000021702 | 0.4601 | - | Thbs4 | protein_coding | 2.45e-14 | 4.71e-10 | 0.0326 | -4.93695 | 0.00e+00 | 3.00e+00 | 5.76e+02 | 0.00e+00 | 2.00e+00 | 9.17e+00 | 0.00e+00 | 1.12e-03 | 2.16e-01 | 1.30e+01 | 2.00e+00 | 1.00e+00 | 3.81e+00 | 1.58e+00 | 1.00e+00 | 4.87e-03 | 7.49e-04 | 3.75e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 103460375 | 103483217 | ENSMUSG00000086503 | 0.4122 | - | Xist | lincRNA | 1.71e-12 | 1.64e-08 | 83.7500 | 6.38802 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.79e-04 | 0.00e+00 | 0.00e+00 | 3.31e+02 | 1.00e+00 | 0.00e+00 | 8.38e+00 | 1.00e+00 | 0.00e+00 | 1.25e-01 | 3.79e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 134082448 | 134095082 | ENSMUSG00000000682 | 0.4953 | - | Cd52 | protein_coding | 2.70e-12 | 1.73e-08 | 0.0363 | -4.78357 | 7.64e+03 | 6.50e+01 | 1.19e+02 | 1.29e+01 | 6.04e+00 | 6.91e+00 | 1.93e+00 | 1.64e-02 | 3.01e-02 | 2.70e+02 | 5.00e+00 | 6.00e+00 | 8.08e+00 | 2.58e+00 | 2.81e+00 | 6.83e-02 | 1.26e-03 | 1.52e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 129342691 | 129365303 | ENSMUSG00000053063 | 0.3896 | + | Clec12a | protein_coding | 8.26e-11 | 3.98e-07 | 0.0231 | -5.43741 | 3.79e+02 | 6.00e+00 | 2.00e+00 | 8.57e+00 | 2.81e+00 | 1.58e+00 | 7.58e-02 | 1.20e-03 | 4.00e-04 | 5.00e+00 | 1.00e+00 | 0.00e+00 | 2.58e+00 | 1.00e+00 | 0.00e+00 | 9.99e-04 | 2.00e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 4133531 | 4138819 | ENSMUSG00000045573 | 0.4386 | - | Penk | protein_coding | 1.34e-10 | 5.14e-07 | 0.0643 | -3.95917 | 4.00e+00 | 1.90e+01 | 8.45e+02 | 2.32e+00 | 4.32e+00 | 9.72e+00 | 1.42e-03 | 6.75e-03 | 3.00e-01 | 1.10e+01 | 3.30e+01 | 9.00e+00 | 3.58e+00 | 5.09e+00 | 3.32e+00 | 3.91e-03 | 1.17e-02 | 3.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 43020811 | 43170818 | ENSMUSG00000051920 | 0.3829 | - | Rspo2 | protein_coding | 2.63e-10 | 8.43e-07 | 0.0719 | -3.79796 | 1.00e+00 | 1.00e+00 | 1.48e+02 | 1.00e+00 | 1.00e+00 | 7.22e+00 | 3.37e-04 | 3.37e-04 | 4.98e-02 | 5.00e+00 | 2.00e+00 | 1.00e+00 | 2.58e+00 | 1.58e+00 | 1.00e+00 | 1.68e-03 | 6.73e-04 | 3.37e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83662584 | 83664683 | ENSMUSG00000018930 | 0.4457 | + | Ccl4 | protein_coding | 6.37e-10 | 1.74e-06 | 0.0558 | -4.16298 | 1.40e+03 | 3.00e+01 | 1.80e+01 | 1.05e+01 | 4.95e+00 | 4.25e+00 | 9.00e-01 | 1.93e-02 | 1.16e-02 | 7.10e+01 | 4.00e+00 | 3.00e+00 | 6.17e+00 | 2.32e+00 | 2.00e+00 | 4.56e-02 | 2.57e-03 | 1.93e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 35170991 | 35176068 | ENSMUSG00000024397 | 0.5228 | - | Aif1 | protein_coding | 7.23e-10 | 1.74e-06 | 0.0565 | -4.14505 | 2.01e+03 | 8.00e+00 | 5.00e+01 | 1.10e+01 | 3.17e+00 | 5.67e+00 | 5.18e-01 | 2.06e-03 | 1.29e-02 | 1.10e+02 | 0.00e+00 | 4.00e+00 | 6.79e+00 | 0.00e+00 | 2.32e+00 | 2.84e-02 | 0.00e+00 | 1.03e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 78559169 | 78572783 | ENSMUSG00000033220 | 0.5340 | - | Rac2 | protein_coding | 8.53e-10 | 1.82e-06 | 0.0556 | -4.16993 | 1.09e+03 | 2.00e+01 | 3.50e+01 | 1.01e+01 | 4.39e+00 | 5.17e+00 | 2.39e-01 | 4.37e-03 | 7.66e-03 | 5.80e+01 | 1.00e+00 | 2.00e+00 | 5.88e+00 | 1.00e+00 | 1.58e+00 | 1.27e-02 | 2.19e-04 | 4.37e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 43446462 | 43454628 | ENSMUSG00000028459 | 0.5155 | - | Cd72 | protein_coding | 1.56e-09 | 3.00e-06 | 0.0543 | -4.20206 | 1.33e+03 | 6.00e+00 | 2.30e+01 | 1.04e+01 | 2.81e+00 | 4.58e+00 | 1.75e-01 | 7.89e-04 | 3.02e-03 | 7.10e+01 | 0.00e+00 | 0.00e+00 | 6.17e+00 | 0.00e+00 | 0.00e+00 | 9.33e-03 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 134220053 | 134229625 | ENSMUSG00000015950 | 0.5368 | - | Ncf1 | protein_coding | 1.27e-08 | 2.21e-05 | 0.0491 | -4.34915 | 4.13e+02 | 4.00e+00 | 8.00e+00 | 8.69e+00 | 2.32e+00 | 3.17e+00 | 7.30e-02 | 7.07e-04 | 1.41e-03 | 1.60e+01 | 1.00e+00 | 1.00e+00 | 4.09e+00 | 1.00e+00 | 1.00e+00 | 2.83e-03 | 1.77e-04 | 1.77e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 120474538 | 120505024 | ENSMUSG00000026390 | 0.4694 | - | Marco | protein_coding | 1.38e-08 | 2.21e-05 | 0.0796 | -3.65145 | 3.43e+03 | 5.70e+01 | 1.32e+02 | 1.17e+01 | 5.86e+00 | 7.06e+00 | 1.30e+00 | 2.17e-02 | 5.02e-02 | 2.77e+02 | 7.00e+00 | 1.00e+00 | 8.12e+00 | 3.00e+00 | 1.00e+00 | 1.05e-01 | 2.66e-03 | 3.80e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 74375195 | 74386062 | ENSMUSG00000026177 | 0.5207 | + | Slc11a1 | protein_coding | 1.76e-08 | 2.60e-05 | 0.0537 | -4.21860 | 5.97e+02 | 8.00e+00 | 2.50e+01 | 9.22e+00 | 3.17e+00 | 4.70e+00 | 6.40e-02 | 8.57e-04 | 2.68e-03 | 3.00e+01 | 1.00e+00 | 0.00e+00 | 4.95e+00 | 1.00e+00 | 0.00e+00 | 3.21e-03 | 1.07e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 87250758 | 87263738 | ENSMUSG00000015852 | 0.4453 | - | Fcrls | protein_coding | 3.40e-08 | 4.67e-05 | 0.0341 | -4.87447 | 3.41e+02 | 0.00e+00 | 8.00e+00 | 8.42e+00 | 0.00e+00 | 3.17e+00 | 1.09e-01 | 0.00e+00 | 2.56e-03 | 6.00e+00 | 2.00e+00 | 1.00e+00 | 2.81e+00 | 1.58e+00 | 1.00e+00 | 1.92e-03 | 6.40e-04 | 3.20e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 136889804 | 136893065 | ENSMUSG00000036896 | 0.5512 | - | C1qc | protein_coding | 4.25e-08 | 5.45e-05 | 0.0554 | -4.17414 | 6.66e+02 | 7.00e+00 | 1.00e+01 | 9.38e+00 | 3.00e+00 | 3.46e+00 | 2.42e-01 | 2.55e-03 | 3.64e-03 | 3.30e+01 | 0.00e+00 | 2.00e+00 | 5.09e+00 | 0.00e+00 | 1.58e+00 | 1.20e-02 | 0.00e+00 | 7.28e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 171229572 | 171234365 | ENSMUSG00000058715 | 0.4864 | - | Fcer1g | protein_coding | 4.89e-08 | 5.88e-05 | 0.0830 | -3.59134 | 1.07e+03 | 2.00e+01 | 4.00e+01 | 1.01e+01 | 4.39e+00 | 5.36e+00 | 3.75e-01 | 7.00e-03 | 1.40e-02 | 9.00e+01 | 1.00e+00 | 0.00e+00 | 6.51e+00 | 1.00e+00 | 0.00e+00 | 3.15e-02 | 3.50e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 122921848 | 122934619 | ENSMUSG00000049037 | 0.4108 | + | Clec4a1 | protein_coding | 5.46e-08 | 6.18e-05 | 0.0787 | -3.66693 | 8.21e+02 | 9.00e+00 | 1.80e+01 | 9.68e+00 | 3.32e+00 | 4.25e+00 | 4.21e-01 | 4.62e-03 | 9.24e-03 | 6.10e+01 | 1.00e+00 | 2.00e+00 | 5.95e+00 | 1.00e+00 | 1.58e+00 | 3.13e-02 | 5.13e-04 | 1.03e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 136895917 | 136898803 | ENSMUSG00000036887 | 0.5535 | - | C1qa | protein_coding | 7.85e-08 | 8.40e-05 | 0.0646 | -3.95321 | 7.04e+02 | 9.00e+00 | 1.20e+01 | 9.46e+00 | 3.32e+00 | 3.70e+00 | 4.72e-01 | 6.04e-03 | 8.05e-03 | 4.00e+01 | 1.00e+00 | 3.00e+00 | 5.36e+00 | 1.00e+00 | 2.00e+00 | 2.68e-02 | 6.71e-04 | 2.01e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127296260 | 127335138 | ENSMUSG00000030830 | 0.4953 | + | Itgal | protein_coding | 1.10e-07 | 1.11e-04 | 0.0696 | -3.84565 | 1.07e+03 | 1.00e+01 | 2.70e+01 | 1.01e+01 | 3.46e+00 | 4.81e+00 | 1.76e-01 | 1.65e-03 | 4.45e-03 | 7.40e+01 | 0.00e+00 | 0.00e+00 | 6.23e+00 | 0.00e+00 | 0.00e+00 | 1.22e-02 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83647844 | 83649355 | ENSMUSG00000000982 | 0.4630 | - | Ccl3 | protein_coding | 1.22e-07 | 1.18e-04 | 0.0788 | -3.66588 | 2.84e+02 | 2.60e+01 | 1.70e+01 | 8.15e+00 | 4.75e+00 | 4.17e+00 | 1.71e-01 | 1.56e-02 | 1.02e-02 | 2.20e+01 | 1.00e+00 | 0.00e+00 | 4.52e+00 | 1.00e+00 | 0.00e+00 | 1.32e-02 | 6.01e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 89199209 | 89207827 | ENSMUSG00000089929 | 0.3732 | + | Bcl2a1b | protein_coding | 1.95e-07 | 1.79e-04 | 0.0521 | -4.26383 | 3.40e+02 | 1.00e+00 | 2.10e+01 | 8.41e+00 | 1.00e+00 | 4.46e+00 | 2.43e-01 | 7.14e-04 | 1.50e-02 | 1.50e+01 | 1.00e+00 | 0.00e+00 | 4.00e+00 | 1.00e+00 | 0.00e+00 | 1.07e-02 | 7.14e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 130913125 | 130936141 | ENSMUSG00000028581 | 0.5309 | + | Laptm5 | protein_coding | 2.23e-07 | 1.95e-04 | 0.1031 | -3.27764 | 2.74e+03 | 7.40e+01 | 1.07e+02 | 1.14e+01 | 6.23e+00 | 6.75e+00 | 2.63e-01 | 7.12e-03 | 1.03e-02 | 2.88e+02 | 5.00e+00 | 5.00e+00 | 8.17e+00 | 2.58e+00 | 2.58e+00 | 2.77e-02 | 4.81e-04 | 4.81e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 122288751 | 122634402 | ENSMUSG00000052889 | 0.4577 | + | Prkcb | protein_coding | 2.37e-07 | 1.98e-04 | 0.0820 | -3.60800 | 1.02e+03 | 1.10e+01 | 3.50e+01 | 1.00e+01 | 3.58e+00 | 5.17e+00 | 1.32e-01 | 1.42e-03 | 4.51e-03 | 6.20e+01 | 1.30e+01 | 1.00e+01 | 5.98e+00 | 3.81e+00 | 3.46e+00 | 7.98e-03 | 1.67e-03 | 1.29e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 116633008 | 116673952 | ENSMUSG00000042129 | 0.4884 | - | Rassf4 | protein_coding | 2.62e-07 | 2.09e-04 | 0.0738 | -3.76033 | 6.39e+02 | 1.00e+00 | 2.10e+01 | 9.32e+00 | 1.00e+00 | 4.46e+00 | 5.40e-02 | 8.45e-05 | 1.77e-03 | 3.30e+01 | 1.20e+01 | 1.00e+00 | 5.09e+00 | 3.70e+00 | 1.00e+00 | 2.79e-03 | 1.01e-03 | 8.45e-05 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 127132232 | 127137823 | ENSMUSG00000051457 | 0.5097 | - | Spn | protein_coding | 2.71e-07 | 2.09e-04 | 0.0694 | -3.84874 | 7.33e+02 | 9.00e+00 | 3.30e+01 | 9.52e+00 | 3.32e+00 | 5.09e+00 | 1.28e-01 | 1.57e-03 | 5.77e-03 | 4.20e+01 | 8.00e+00 | 1.00e+00 | 5.43e+00 | 3.17e+00 | 1.00e+00 | 7.34e-03 | 1.40e-03 | 1.75e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 120102353 | 120120992 | ENSMUSG00000030917 | 0.4573 | + | Tmem159 | protein_coding | 3.37e-07 | 2.42e-04 | 0.1324 | -2.91741 | 8.20e+01 | 8.40e+01 | 1.07e+03 | 6.38e+00 | 6.41e+00 | 1.01e+01 | 1.82e-02 | 1.87e-02 | 2.38e-01 | 8.10e+01 | 4.50e+01 | 3.50e+01 | 6.36e+00 | 5.52e+00 | 5.17e+00 | 1.80e-02 | 1.00e-02 | 7.78e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 22126727 | 22135711 | ENSMUSG00000001348 | 0.5233 | - | Acp5 | protein_coding | 3.39e-07 | 2.42e-04 | 0.0934 | -3.41974 | 6.77e+02 | 1.70e+01 | 2.00e+01 | 9.41e+00 | 4.17e+00 | 4.39e+00 | 2.42e-01 | 6.07e-03 | 7.14e-03 | 5.60e+01 | 4.00e+00 | 4.00e+00 | 5.83e+00 | 2.32e+00 | 2.32e+00 | 2.00e-02 | 1.43e-03 | 1.43e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 3000282 | 3038313 | ENSMUSG00000097312 | 0.3488 | - | Gm26870 | lincRNA | 4.18e-07 | 2.87e-04 | 20.1087 | 4.32975 | 1.00e+00 | 1.00e+00 | 4.10e+01 | 1.00e+00 | 1.00e+00 | 5.39e+00 | 2.66e-04 | 2.66e-04 | 1.09e-02 | 1.70e+01 | 2.72e+02 | 6.33e+02 | 4.17e+00 | 8.09e+00 | 9.31e+00 | 4.52e-03 | 7.23e-02 | 1.68e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 11586604 | 11604849 | ENSMUSG00000024679 | 0.4128 | - | Ms4a6d | protein_coding | 5.98e-07 | 3.97e-04 | 0.0904 | -3.46787 | 6.49e+02 | 1.10e+01 | 2.30e+01 | 9.34e+00 | 3.58e+00 | 4.58e+00 | 2.17e-01 | 3.68e-03 | 7.69e-03 | 5.80e+01 | 1.00e+00 | 0.00e+00 | 5.88e+00 | 1.00e+00 | 0.00e+00 | 1.94e-02 | 3.34e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 75131101 | 75230842 | ENSMUSG00000021998 | 0.4291 | + | Lcp1 | protein_coding | 6.76e-07 | 4.34e-04 | 0.1004 | -3.31628 | 1.20e+03 | 1.90e+01 | 4.90e+01 | 1.02e+01 | 4.32e+00 | 5.64e+00 | 1.31e-01 | 2.07e-03 | 5.35e-03 | 9.10e+01 | 3.00e+01 | 4.00e+00 | 6.52e+00 | 4.95e+00 | 2.32e+00 | 9.93e-03 | 3.27e-03 | 4.36e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36934983 | 36963212 | ENSMUSG00000022831 | 0.4295 | + | Hcls1 | protein_coding | 8.33e-07 | 5.17e-04 | 0.0818 | -3.61203 | 7.69e+02 | 1.50e+01 | 2.00e+01 | 9.59e+00 | 4.00e+00 | 4.39e+00 | 9.95e-02 | 1.94e-03 | 2.59e-03 | 4.50e+01 | 8.00e+00 | 1.00e+01 | 5.52e+00 | 3.17e+00 | 3.46e+00 | 5.83e-03 | 1.04e-03 | 1.29e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 57358686 | 57483529 | ENSMUSG00000004730 | 0.4116 | + | Adgre1 | protein_coding | 8.62e-07 | 5.19e-04 | 0.0972 | -3.36287 | 6.24e+02 | 2.50e+01 | 2.70e+01 | 9.29e+00 | 4.70e+00 | 4.81e+00 | 3.75e-01 | 1.50e-02 | 1.62e-02 | 6.20e+01 | 1.00e+00 | 0.00e+00 | 5.98e+00 | 1.00e+00 | 0.00e+00 | 3.73e-02 | 6.01e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 165405028 | 165473230 | ENSMUSG00000018459 | 0.5038 | - | Slc13a3 | protein_coding | 1.13e-06 | 6.58e-04 | 0.1040 | -3.26534 | 3.38e+02 | 1.00e+01 | 2.40e+01 | 8.41e+00 | 3.46e+00 | 4.64e+00 | 6.21e-02 | 1.84e-03 | 4.41e-03 | 3.30e+01 | 2.00e+00 | 1.00e+00 | 5.09e+00 | 1.58e+00 | 1.00e+00 | 6.07e-03 | 3.68e-04 | 1.84e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 78597047 | 78622019 | ENSMUSG00000018008 | 0.5401 | + | Cyth4 | protein_coding | 1.18e-06 | 6.69e-04 | 0.0806 | -3.63364 | 3.89e+02 | 1.30e+01 | 1.70e+01 | 8.61e+00 | 3.81e+00 | 4.17e+00 | 1.44e-01 | 4.80e-03 | 6.28e-03 | 3.00e+01 | 0.00e+00 | 1.00e+00 | 4.95e+00 | 0.00e+00 | 1.00e+00 | 1.11e-02 | 0.00e+00 | 3.69e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 152008803 | 152017680 | ENSMUSG00000073700 | 0.5585 | + | Klhl21 | protein_coding | 1.38e-06 | 7.54e-04 | 0.1054 | -3.24656 | 4.82e+03 | 1.67e+02 | 2.70e+02 | 1.22e+01 | 7.39e+00 | 8.08e+00 | 1.46e+00 | 5.05e-02 | 8.17e-02 | 2.45e+02 | 1.52e+02 | 1.54e+02 | 7.94e+00 | 7.26e+00 | 7.28e+00 | 7.41e-02 | 4.60e-02 | 4.66e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 127514939 | 127517152 | ENSMUSG00000040280 | 0.5664 | + | Ndufa4l2 | protein_coding | 1.41e-06 | 7.54e-04 | 0.0769 | -3.70044 | 1.40e+01 | 2.00e+01 | 2.00e+00 | 3.91e+00 | 4.39e+00 | 1.58e+00 | 7.34e-03 | 1.05e-02 | 1.05e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 88278085 | 88310888 | ENSMUSG00000030560 | 0.3804 | + | Ctsc | protein_coding | 1.46e-06 | 7.61e-04 | 0.0736 | -3.76398 | 4.80e+02 | 5.90e+01 | 1.50e+01 | 8.91e+00 | 5.91e+00 | 4.00e+00 | 4.80e-02 | 5.90e-03 | 1.50e-03 | 2.40e+01 | 1.00e+01 | 4.00e+00 | 4.64e+00 | 3.46e+00 | 2.32e+00 | 2.40e-03 | 1.00e-03 | 4.00e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 30413760 | 30417585 | ENSMUSG00000030579 | 0.4851 | + | Tyrobp | protein_coding | 1.57e-06 | 7.95e-04 | 0.1078 | -3.21398 | 7.57e+02 | 1.10e+01 | 2.70e+01 | 9.57e+00 | 3.58e+00 | 4.81e+00 | 2.13e-01 | 3.10e-03 | 7.61e-03 | 7.90e+01 | 3.00e+00 | 1.00e+00 | 6.32e+00 | 2.00e+00 | 1.00e+00 | 2.23e-02 | 8.45e-04 | 2.82e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 113818536 | 113832644 | ENSMUSG00000048163 | 0.5032 | - | Selplg | protein_coding | 2.26e-06 | 1.12e-03 | 0.0741 | -3.75489 | 3.34e+02 | 6.00e+00 | 8.00e+00 | 8.39e+00 | 2.81e+00 | 3.17e+00 | 7.92e-02 | 1.42e-03 | 1.90e-03 | 2.10e+01 | 1.00e+00 | 1.00e+00 | 4.46e+00 | 1.00e+00 | 1.00e+00 | 4.98e-03 | 2.37e-04 | 2.37e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 66780819 | 66831829 | ENSMUSG00000022372 | 0.4494 | - | Sla | protein_coding | 2.68e-06 | 1.29e-03 | 0.0661 | -3.91966 | 4.25e+02 | 1.40e+01 | 1.20e+01 | 8.73e+00 | 3.91e+00 | 3.70e+00 | 1.00e-01 | 3.31e-03 | 2.84e-03 | 2.20e+01 | 2.00e+00 | 3.00e+00 | 4.52e+00 | 1.58e+00 | 2.00e+00 | 5.20e-03 | 4.73e-04 | 7.09e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164940780 | 164955850 | ENSMUSG00000017737 | 0.5213 | + | Mmp9 | protein_coding | 3.69e-06 | 1.73e-03 | 0.1165 | -3.10154 | 3.80e+02 | 1.40e+01 | 1.50e+01 | 8.57e+00 | 3.91e+00 | 4.00e+00 | 8.07e-02 | 2.97e-03 | 3.19e-03 | 3.30e+01 | 5.00e+00 | 7.00e+00 | 5.09e+00 | 2.58e+00 | 3.00e+00 | 7.01e-03 | 1.06e-03 | 1.49e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 131548773 | 131558014 | ENSMUSG00000050100 | 0.5220 | + | Hmx2 | protein_coding | 3.87e-06 | 1.77e-03 | 7.2207 | 2.85214 | 3.20e+01 | 7.00e+01 | 4.00e+01 | 5.04e+00 | 6.15e+00 | 5.36e+00 | 9.73e-03 | 2.13e-02 | 1.22e-02 | 9.30e+01 | 3.18e+02 | 6.33e+02 | 6.55e+00 | 8.32e+00 | 9.31e+00 | 2.83e-02 | 9.67e-02 | 1.93e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 77530252 | 77565708 | ENSMUSG00000000290 | 0.5026 | + | Itgb2 | protein_coding | 4.66e-06 | 2.08e-03 | 0.0693 | -3.85148 | 3.16e+02 | 7.00e+00 | 6.00e+00 | 8.31e+00 | 3.00e+00 | 2.81e+00 | 2.14e-02 | 4.74e-04 | 4.06e-04 | 1.90e+01 | 0.00e+00 | 1.00e+00 | 4.32e+00 | 0.00e+00 | 1.00e+00 | 1.29e-03 | 0.00e+00 | 6.77e-05 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 32142785 | 32165594 | ENSMUSG00000052384 | 0.4701 | - | Nrros | protein_coding | 4.75e-06 | 2.08e-03 | 0.0658 | -3.92510 | 3.06e+02 | 3.00e+00 | 7.00e+00 | 8.26e+00 | 2.00e+00 | 3.00e+00 | 7.28e-02 | 7.14e-04 | 1.67e-03 | 9.00e+00 | 5.00e+00 | 4.00e+00 | 3.32e+00 | 2.58e+00 | 2.32e+00 | 2.14e-03 | 1.19e-03 | 9.52e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 80003396 | 80003914 | ENSMUSG00000083076 | 0.3545 | - | Gm11408 | processed_pseudogene | 5.41e-06 | 2.31e-03 | 28.0000 | 4.80735 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 4.60e+01 | 3.50e+01 | 0.00e+00 | 5.55e+00 | 5.17e+00 | 0.00e+00 | 3.67e-02 | 2.79e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 95526786 | 95556403 | ENSMUSG00000038642 | 0.4437 | + | Ctss | protein_coding | 6.06e-06 | 2.52e-03 | 0.1230 | -3.02294 | 5.91e+02 | 1.60e+01 | 2.40e+01 | 9.21e+00 | 4.09e+00 | 4.64e+00 | 4.01e-01 | 1.09e-02 | 1.63e-02 | 6.90e+01 | 5.00e+00 | 1.00e+00 | 6.13e+00 | 2.58e+00 | 1.00e+00 | 4.69e-02 | 3.40e-03 | 6.79e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 91082390 | 91115756 | ENSMUSG00000002111 | 0.4989 | + | Spi1 | protein_coding | 6.16e-06 | 2.52e-03 | 0.0772 | -3.69561 | 2.85e+02 | 3.00e+00 | 7.00e+00 | 8.16e+00 | 2.00e+00 | 3.00e+00 | 5.30e-02 | 5.58e-04 | 1.30e-03 | 1.80e+01 | 2.00e+00 | 0.00e+00 | 4.25e+00 | 1.58e+00 | 0.00e+00 | 3.35e-03 | 3.72e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 49036546 | 49070929 | ENSMUSG00000029816 | 0.4470 | + | Gpnmb | protein_coding | 8.11e-06 | 3.21e-03 | 6.8248 | 2.77080 | 2.60e+02 | 2.24e+02 | 3.18e+02 | 8.03e+00 | 7.81e+00 | 8.32e+00 | 2.57e-02 | 2.21e-02 | 3.14e-02 | 3.67e+02 | 2.52e+03 | 2.60e+03 | 8.52e+00 | 1.13e+01 | 1.13e+01 | 3.62e-02 | 2.49e-01 | 2.56e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 149264767 | 149288153 | ENSMUSG00000060063 | 0.4839 | + | Alox5ap | protein_coding | 8.18e-06 | 3.21e-03 | 0.1012 | -3.30535 | 3.28e+02 | 4.00e+00 | 1.10e+01 | 8.36e+00 | 2.32e+00 | 3.58e+00 | 1.95e-01 | 2.38e-03 | 6.55e-03 | 3.10e+01 | 0.00e+00 | 1.00e+00 | 5.00e+00 | 0.00e+00 | 1.00e+00 | 1.85e-02 | 0.00e+00 | 5.95e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 35185095 | 35188439 | ENSMUSG00000073412 | 0.5040 | - | Lst1 | protein_coding | 8.45e-06 | 3.25e-03 | 0.0921 | -3.44110 | 3.62e+02 | 1.10e+01 | 1.50e+01 | 8.50e+00 | 3.58e+00 | 4.00e+00 | 2.71e-01 | 8.22e-03 | 1.12e-02 | 2.80e+01 | 4.00e+00 | 1.00e+00 | 4.86e+00 | 2.32e+00 | 1.00e+00 | 2.09e-02 | 2.99e-03 | 7.47e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group6_vs_group7.Download the whole result list for group6_vs_group7.DEG table for the contrast group1_vs_group5The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group1_vs_group5. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group1_vs_group5 | log2_normalized_fold_change_group1_vs_group5 | natural_normalized_counts_1_Wt_1_SFs | natural_normalized_counts_2_Wt_2_SFs | natural_normalized_counts_3_Wt_3_SFs | log2_normalized_counts_1_Wt_1_SFs | log2_normalized_counts_2_Wt_2_SFs | log2_normalized_counts_3_Wt_3_SFs | rpgm_normalized_counts_1_Wt_1_SFs | rpgm_normalized_counts_2_Wt_2_SFs | rpgm_normalized_counts_3_Wt_3_SFs | natural_normalized_counts_12_Wt_1_VICs | natural_normalized_counts_13_Wt_2_VICs | natural_normalized_counts_14_Wt_3_VICs | log2_normalized_counts_12_Wt_1_VICs | log2_normalized_counts_13_Wt_2_VICs | log2_normalized_counts_14_Wt_3_VICs | rpgm_normalized_counts_12_Wt_1_VICs | rpgm_normalized_counts_13_Wt_2_VICs | rpgm_normalized_counts_14_Wt_3_VICs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr9 | 24718138 | 24774303 | ENSMUSG00000031965 | 0.4010 | - | Tbx20 | protein_coding | 1.71e-23 | 3.29e-19 | 2.96e+02 | 8.211888 | 3.00e+00 | 6.00e+00 | 0.00e+00 | 2.00e+00 | 2.81e+00 | 0.00e+00 | 2.35e-04 | 4.70e-04 | 0.00e+00 | 1.17e+03 | 1.34e+03 | 1.05e+03 | 1.02e+01 | 1.04e+01 | 1.00e+01 | 9.18e-02 | 1.04e-01 | 8.19e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 136038496 | 136046487 | ENSMUSG00000042985 | 0.5240 | + | Upk3b | protein_coding | 1.21e-22 | 1.17e-18 | 3.76e+02 | 8.554589 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 2.74e-04 | 0.00e+00 | 5.97e+02 | 3.47e+02 | 5.57e+02 | 9.22e+00 | 8.44e+00 | 9.12e+00 | 1.64e-01 | 9.51e-02 | 1.53e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 93014205 | 93015687 | ENSMUSG00000027913 | 0.4990 | - | Crct1 | protein_coding | 3.14e-21 | 2.02e-17 | 1.77e+02 | 7.468769 | 1.00e+01 | 3.00e+00 | 1.20e+01 | 3.46e+00 | 2.00e+00 | 3.70e+00 | 6.37e-03 | 1.91e-03 | 7.65e-03 | 1.64e+03 | 1.98e+03 | 1.34e+03 | 1.07e+01 | 1.09e+01 | 1.04e+01 | 1.04e+00 | 1.26e+00 | 8.57e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 54954843 | 55060871 | ENSMUSG00000031517 | 0.3518 | + | Gpm6a | protein_coding | 1.65e-17 | 7.95e-14 | 1.82e+02 | 7.507795 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.13e-04 | 3.10e+02 | 1.98e+02 | 2.17e+02 | 8.28e+00 | 7.64e+00 | 7.77e+00 | 9.70e-02 | 6.20e-02 | 6.79e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 69029289 | 69041401 | ENSMUSG00000014813 | 0.4445 | + | Stc1 | protein_coding | 2.18e-17 | 8.39e-14 | 1.38e-02 | -6.177039 | 9.30e+02 | 2.03e+03 | 1.31e+03 | 9.86e+00 | 1.10e+01 | 1.04e+01 | 2.24e-01 | 4.88e-01 | 3.16e-01 | 9.00e+00 | 1.90e+01 | 2.80e+01 | 3.32e+00 | 4.32e+00 | 4.86e+00 | 2.17e-03 | 4.58e-03 | 6.74e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 33027416 | 33041884 | ENSMUSG00000021403 | 0.4160 | + | Serpinb9b | protein_coding | 3.94e-17 | 1.26e-13 | 8.22e+01 | 6.361793 | 1.00e+00 | 1.90e+01 | 6.00e+00 | 1.00e+00 | 4.32e+00 | 2.81e+00 | 3.15e-04 | 5.98e-03 | 1.89e-03 | 9.89e+02 | 6.51e+02 | 7.42e+02 | 9.95e+00 | 9.35e+00 | 9.54e+00 | 3.11e-01 | 2.05e-01 | 2.33e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 40423815 | 40510268 | ENSMUSG00000039470 | 0.3927 | + | Zdhhc2 | protein_coding | 1.11e-16 | 3.05e-13 | 7.07e+01 | 6.142688 | 3.40e+01 | 2.60e+01 | 3.80e+01 | 5.13e+00 | 4.75e+00 | 5.29e+00 | 4.12e-03 | 3.15e-03 | 4.60e-03 | 2.90e+03 | 2.68e+03 | 1.56e+03 | 1.15e+01 | 1.14e+01 | 1.06e+01 | 3.50e-01 | 3.24e-01 | 1.89e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 142650766 | 142666816 | ENSMUSG00000048583 | 0.5479 | - | Igf2 | protein_coding | 3.17e-16 | 7.62e-13 | 1.35e-02 | -6.211618 | 2.97e+02 | 7.83e+02 | 2.51e+02 | 8.22e+00 | 9.61e+00 | 7.98e+00 | 4.22e-02 | 1.11e-01 | 3.56e-02 | 1.00e+00 | 1.00e+01 | 4.00e+00 | 1.00e+00 | 3.46e+00 | 2.32e+00 | 1.42e-04 | 1.42e-03 | 5.68e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 142575529 | 142578143 | ENSMUSG00000000031 | 0.5583 | - | H19 | lincRNA | 1.05e-15 | 2.11e-12 | 1.83e-02 | -5.774787 | 5.74e+02 | 1.12e+03 | 9.31e+02 | 9.17e+00 | 1.01e+01 | 9.86e+00 | 2.03e-01 | 3.97e-01 | 3.30e-01 | 7.00e+00 | 2.20e+01 | 1.60e+01 | 3.00e+00 | 4.52e+00 | 4.09e+00 | 2.48e-03 | 7.79e-03 | 5.67e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 180934772 | 180954699 | ENSMUSG00000027574 | 0.4915 | - | Nkain4 | protein_coding | 1.10e-15 | 2.11e-12 | 6.52e+01 | 6.027581 | 6.00e+00 | 6.00e+00 | 2.00e+00 | 2.81e+00 | 2.81e+00 | 1.58e+00 | 9.21e-04 | 9.21e-04 | 3.07e-04 | 1.71e+02 | 6.62e+02 | 2.73e+02 | 7.43e+00 | 9.37e+00 | 8.10e+00 | 2.62e-02 | 1.02e-01 | 4.19e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 70373558 | 70382066 | ENSMUSG00000031849 | 0.5643 | + | Comp | protein_coding | 1.46e-15 | 2.56e-12 | 1.67e-02 | -5.899933 | 2.08e+03 | 1.50e+03 | 2.21e+03 | 1.10e+01 | 1.05e+01 | 1.11e+01 | 3.36e-01 | 2.42e-01 | 3.57e-01 | 1.00e+01 | 7.20e+01 | 1.20e+01 | 3.46e+00 | 6.19e+00 | 3.70e+00 | 1.61e-03 | 1.16e-02 | 1.94e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56231401 | 56234656 | ENSMUSG00000079186 | 0.4877 | - | Gzmc | protein_coding | 3.29e-15 | 5.28e-12 | 1.19e-02 | -6.393748 | 4.04e+02 | 2.94e+02 | 3.08e+02 | 8.66e+00 | 8.20e+00 | 8.27e+00 | 2.96e-01 | 2.15e-01 | 2.25e-01 | 1.00e+00 | 8.00e+00 | 0.00e+00 | 1.00e+00 | 3.17e+00 | 0.00e+00 | 7.32e-04 | 5.85e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 24413392 | 24417835 | ENSMUSG00000038276 | 0.5473 | + | Asic3 | protein_coding | 4.42e-15 | 6.54e-12 | 8.99e-03 | -6.797013 | 2.13e+02 | 1.31e+02 | 2.09e+02 | 7.74e+00 | 7.04e+00 | 7.71e+00 | 4.65e-02 | 2.86e-02 | 4.57e-02 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 4.37e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 36111965 | 36119844 | ENSMUSG00000024803 | 0.4397 | - | Ankrd1 | protein_coding | 6.27e-15 | 8.63e-12 | 1.17e+02 | 6.868730 | 7.00e+01 | 1.24e+02 | 3.70e+01 | 6.15e+00 | 6.97e+00 | 5.25e+00 | 3.51e-02 | 6.21e-02 | 1.85e-02 | 1.30e+04 | 8.53e+03 | 5.82e+03 | 1.37e+01 | 1.31e+01 | 1.25e+01 | 6.51e+00 | 4.27e+00 | 2.91e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 93235841 | 93301065 | ENSMUSG00000047793 | 0.4874 | + | Sned1 | protein_coding | 6.88e-15 | 8.83e-12 | 1.99e-02 | -5.649282 | 8.15e+02 | 1.19e+03 | 1.45e+03 | 9.67e+00 | 1.02e+01 | 1.05e+01 | 8.31e-02 | 1.22e-01 | 1.48e-01 | 7.00e+00 | 5.00e+01 | 9.00e+00 | 3.00e+00 | 5.67e+00 | 3.32e+00 | 7.14e-04 | 5.10e-03 | 9.18e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 22817279 | 22820128 | ENSMUSG00000045680 | 0.4958 | - | Tcf21 | protein_coding | 1.11e-14 | 1.34e-11 | 1.33e+02 | 7.055282 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 8.20e+01 | 9.30e+01 | 2.21e+02 | 6.38e+00 | 6.55e+00 | 7.79e+00 | 4.79e-02 | 5.43e-02 | 1.29e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 20601961 | 20643462 | ENSMUSG00000053279 | 0.3766 | + | Aldh1a1 | protein_coding | 1.48e-14 | 1.67e-11 | 4.82e+01 | 5.591014 | 2.70e+01 | 4.80e+01 | 3.60e+01 | 4.81e+00 | 5.61e+00 | 5.21e+00 | 1.54e-02 | 2.74e-02 | 2.06e-02 | 2.29e+03 | 1.51e+03 | 1.70e+03 | 1.12e+01 | 1.06e+01 | 1.07e+01 | 1.31e+00 | 8.62e-01 | 9.70e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 72211752 | 72409054 | ENSMUSG00000021087 | 0.4375 | - | Rtn1 | protein_coding | 3.00e-14 | 3.21e-11 | 7.14e+01 | 6.157852 | 4.00e+00 | 1.00e+00 | 2.00e+00 | 2.32e+00 | 1.00e+00 | 1.58e+00 | 1.22e-03 | 3.04e-04 | 6.08e-04 | 4.00e+02 | 1.72e+02 | 1.39e+02 | 8.65e+00 | 7.43e+00 | 7.13e+00 | 1.22e-01 | 5.23e-02 | 4.22e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 43506966 | 43513729 | ENSMUSG00000028463 | 0.5099 | + | Car9 | protein_coding | 4.37e-14 | 4.43e-11 | 1.88e-02 | -5.731804 | 9.30e+01 | 2.22e+02 | 5.40e+01 | 6.55e+00 | 7.80e+00 | 5.78e+00 | 2.02e-02 | 4.82e-02 | 1.17e-02 | 1.00e+00 | 0.00e+00 | 3.00e+00 | 1.00e+00 | 0.00e+00 | 2.00e+00 | 2.17e-04 | 0.00e+00 | 6.51e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 22985854 | 23029101 | ENSMUSG00000060459 | 0.4230 | - | Kng2 | protein_coding | 5.91e-14 | 5.69e-11 | 1.57e-02 | -5.996776 | 4.18e+02 | 4.98e+02 | 4.22e+02 | 8.71e+00 | 8.96e+00 | 8.72e+00 | 4.39e-02 | 5.23e-02 | 4.43e-02 | 1.00e+00 | 1.60e+01 | 1.00e+00 | 1.00e+00 | 4.09e+00 | 1.00e+00 | 1.05e-04 | 1.68e-03 | 1.05e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56365068 | 56388551 | ENSMUSG00000022229 | 0.4575 | + | Atp12a | protein_coding | 7.81e-14 | 7.16e-11 | 1.71e-02 | -5.869939 | 5.99e+02 | 7.01e+02 | 3.93e+02 | 9.23e+00 | 9.46e+00 | 8.62e+00 | 3.18e-01 | 3.72e-01 | 2.09e-01 | 2.00e+00 | 2.40e+01 | 0.00e+00 | 1.58e+00 | 4.64e+00 | 0.00e+00 | 1.06e-03 | 1.27e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 66175273 | 66442583 | ENSMUSG00000015222 | 0.3834 | + | Map2 | protein_coding | 1.31e-13 | 1.15e-10 | 5.91e+01 | 5.883929 | 1.00e+00 | 1.00e+00 | 1.40e+01 | 1.00e+00 | 1.00e+00 | 3.91e+00 | 5.00e-05 | 5.00e-05 | 7.00e-04 | 5.83e+02 | 3.81e+02 | 1.55e+02 | 9.19e+00 | 8.58e+00 | 7.29e+00 | 2.92e-02 | 1.91e-02 | 7.75e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164777161 | 164779967 | ENSMUSG00000017300 | 0.5426 | - | Tnnc2 | protein_coding | 2.35e-13 | 1.97e-10 | 8.52e-03 | -6.874469 | 1.05e+02 | 5.23e+02 | 7.30e+01 | 6.73e+00 | 9.03e+00 | 6.21e+00 | 3.96e-02 | 1.97e-01 | 2.76e-02 | 2.00e+00 | 1.00e+00 | 0.00e+00 | 1.58e+00 | 1.00e+00 | 0.00e+00 | 7.55e-04 | 3.78e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 75044018 | 75048830 | ENSMUSG00000079018 | 0.4820 | - | Ly6c1 | protein_coding | 3.15e-13 | 2.45e-10 | 2.74e-02 | -5.192218 | 7.65e+02 | 7.59e+02 | 8.86e+02 | 9.58e+00 | 9.57e+00 | 9.79e+00 | 2.13e-01 | 2.11e-01 | 2.46e-01 | 7.00e+00 | 4.50e+01 | 1.10e+01 | 3.00e+00 | 5.52e+00 | 3.58e+00 | 1.95e-03 | 1.25e-02 | 3.06e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34856412 | 34882042 | ENSMUSG00000092511 | 0.4845 | - | Gm20547 | protein_coding | 3.22e-13 | 2.45e-10 | 1.75e-02 | -5.838225 | 7.17e+03 | 8.02e+03 | 3.23e+03 | 1.28e+01 | 1.30e+01 | 1.17e+01 | 5.65e+00 | 6.32e+00 | 2.54e+00 | 5.00e+01 | 1.79e+02 | 9.00e+01 | 5.67e+00 | 7.49e+00 | 6.51e+00 | 3.94e-02 | 1.41e-01 | 7.09e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 38773184 | 38800203 | ENSMUSG00000049436 | 0.4395 | - | Upk1b | protein_coding | 3.31e-13 | 2.45e-10 | 1.29e+02 | 7.007495 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 1.30e+02 | 4.90e+01 | 2.04e+02 | 7.03e+00 | 5.64e+00 | 7.68e+00 | 6.00e-02 | 2.26e-02 | 9.42e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 23057865 | 23082068 | ENSMUSG00000022875 | 0.4312 | + | Kng1 | protein_coding | 4.45e-13 | 3.17e-10 | 1.39e-02 | -6.171594 | 2.58e+02 | 3.15e+02 | 2.89e+02 | 8.02e+00 | 8.30e+00 | 8.18e+00 | 5.83e-02 | 7.12e-02 | 6.53e-02 | 0.00e+00 | 8.00e+00 | 1.00e+00 | 0.00e+00 | 3.17e+00 | 1.00e+00 | 0.00e+00 | 1.81e-03 | 2.26e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 63198922 | 63271692 | ENSMUSG00000021944 | 0.4731 | - | Gata4 | protein_coding | 6.62e-13 | 4.55e-10 | 1.01e+02 | 6.662965 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 1.15e+02 | 8.50e+01 | 1.01e+02 | 6.86e+00 | 6.43e+00 | 6.67e+00 | 2.89e-02 | 2.14e-02 | 2.54e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 123411424 | 123422015 | ENSMUSG00000062380 | 0.5051 | + | Tubb3 | protein_coding | 9.64e-13 | 6.40e-10 | 2.81e+01 | 4.814934 | 1.14e+02 | 8.70e+01 | 7.40e+01 | 6.85e+00 | 6.46e+00 | 6.23e+00 | 3.53e-02 | 2.69e-02 | 2.29e-02 | 5.36e+03 | 1.47e+03 | 9.93e+02 | 1.24e+01 | 1.05e+01 | 9.96e+00 | 1.66e+00 | 4.54e-01 | 3.07e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56117619 | 56120625 | ENSMUSG00000022156 | 0.4865 | - | Gzme | protein_coding | 1.17e-12 | 7.49e-10 | 2.73e-02 | -5.194757 | 9.29e+02 | 1.02e+03 | 6.86e+02 | 9.86e+00 | 9.99e+00 | 9.42e+00 | 6.83e-01 | 7.49e-01 | 5.04e-01 | 5.00e+00 | 6.40e+01 | 0.00e+00 | 2.58e+00 | 6.02e+00 | 0.00e+00 | 3.67e-03 | 4.70e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 117220625 | 117274098 | ENSMUSG00000021728 | 0.4173 | + | Emb | protein_coding | 1.21e-12 | 7.54e-10 | 3.23e-02 | -4.950144 | 9.15e+02 | 7.28e+02 | 1.20e+03 | 9.84e+00 | 9.51e+00 | 1.02e+01 | 4.00e-01 | 3.18e-01 | 5.23e-01 | 1.10e+01 | 5.30e+01 | 2.50e+01 | 3.58e+00 | 5.75e+00 | 4.70e+00 | 4.80e-03 | 2.31e-02 | 1.09e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 166523007 | 166585720 | ENSMUSG00000000402 | 0.4254 | - | Egfl6 | protein_coding | 2.11e-12 | 1.27e-09 | 8.03e-03 | -6.960002 | 1.59e+02 | 8.70e+01 | 2.49e+02 | 7.32e+00 | 6.46e+00 | 7.97e+00 | 7.54e-02 | 4.13e-02 | 1.18e-01 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 4.74e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 60934155 | 60936625 | ENSMUSG00000044258 | 0.4278 | - | Ctla2a | protein_coding | 2.27e-12 | 1.33e-09 | 3.51e+01 | 5.132450 | 3.00e+00 | 1.60e+01 | 4.00e+00 | 2.00e+00 | 4.09e+00 | 2.32e+00 | 1.42e-03 | 7.55e-03 | 1.89e-03 | 3.23e+02 | 1.70e+02 | 4.16e+02 | 8.34e+00 | 7.42e+00 | 8.70e+00 | 1.52e-01 | 8.02e-02 | 1.96e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 103513341 | 103613346 | ENSMUSG00000022123 | 0.4082 | + | Scel | protein_coding | 3.34e-12 | 1.89e-09 | 3.76e+01 | 5.232312 | 4.00e+00 | 5.00e+00 | 1.00e+01 | 2.32e+00 | 2.58e+00 | 3.46e+00 | 1.82e-03 | 2.27e-03 | 4.54e-03 | 2.42e+02 | 3.53e+02 | 2.29e+02 | 7.92e+00 | 8.47e+00 | 7.85e+00 | 1.10e-01 | 1.60e-01 | 1.04e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 92751590 | 92794818 | ENSMUSG00000021702 | 0.4601 | - | Thbs4 | protein_coding | 3.85e-12 | 2.12e-09 | 2.68e-02 | -5.224168 | 3.35e+03 | 2.18e+03 | 2.05e+03 | 1.17e+01 | 1.11e+01 | 1.10e+01 | 1.26e+00 | 8.18e-01 | 7.67e-01 | 2.50e+01 | 1.62e+02 | 1.30e+01 | 4.70e+00 | 7.35e+00 | 3.81e+00 | 9.37e-03 | 6.07e-02 | 4.87e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 7272514 | 7283331 | ENSMUSG00000050578 | 0.3772 | + | Mmp13 | protein_coding | 7.87e-12 | 4.21e-09 | 3.55e-02 | -4.816288 | 8.00e+02 | 1.64e+03 | 7.98e+02 | 9.65e+00 | 1.07e+01 | 9.64e+00 | 3.24e-01 | 6.64e-01 | 3.23e-01 | 1.20e+01 | 8.80e+01 | 1.20e+01 | 3.70e+00 | 6.48e+00 | 3.70e+00 | 4.86e-03 | 3.57e-02 | 4.86e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 143078473 | 143081713 | ENSMUSG00000027416 | 0.3891 | + | Otor | protein_coding | 2.19e-11 | 1.14e-08 | 2.37e-02 | -5.398549 | 2.14e+02 | 4.80e+02 | 2.31e+02 | 7.75e+00 | 8.91e+00 | 7.86e+00 | 1.20e-01 | 2.68e-01 | 1.29e-01 | 1.00e+00 | 1.80e+01 | 0.00e+00 | 1.00e+00 | 4.25e+00 | 0.00e+00 | 5.59e-04 | 1.01e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36450537 | 36455392 | ENSMUSG00000054905 | 0.4016 | - | Stfa3 | protein_coding | 2.50e-11 | 1.27e-08 | 2.17e-02 | -5.523562 | 1.90e+01 | 9.40e+01 | 2.20e+01 | 4.32e+00 | 6.57e+00 | 4.52e+00 | 1.43e-02 | 7.09e-02 | 1.66e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 92321347 | 92328079 | ENSMUSG00000029417 | 0.4151 | - | Cxcl9 | protein_coding | 2.58e-11 | 1.27e-08 | 1.30e-02 | -6.266787 | 1.35e+02 | 1.33e+02 | 3.70e+01 | 7.09e+00 | 7.07e+00 | 5.25e+00 | 2.72e-02 | 2.68e-02 | 7.46e-03 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 2.02e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 60376029 | 60392627 | ENSMUSG00000054072 | 0.4020 | + | Iigp1 | protein_coding | 3.28e-11 | 1.58e-08 | 5.73e-02 | -4.125109 | 2.89e+02 | 6.73e+02 | 5.88e+02 | 8.18e+00 | 9.40e+00 | 9.20e+00 | 1.02e-01 | 2.38e-01 | 2.08e-01 | 4.00e+00 | 2.00e+01 | 6.20e+01 | 2.32e+00 | 4.39e+00 | 5.98e+00 | 1.41e-03 | 7.07e-03 | 2.19e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 92750148 | 92752338 | ENSMUSG00000027919 | 0.4350 | - | Lce1g | protein_coding | 3.68e-11 | 1.73e-08 | 6.19e+01 | 5.950868 | 0.00e+00 | 0.00e+00 | 4.00e+00 | 0.00e+00 | 0.00e+00 | 2.32e+00 | 0.00e+00 | 0.00e+00 | 2.37e-03 | 7.10e+01 | 9.80e+01 | 2.61e+02 | 6.17e+00 | 6.63e+00 | 8.03e+00 | 4.21e-02 | 5.81e-02 | 1.55e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 110279068 | 110281097 | ENSMUSG00000075707 | 0.5783 | + | Dio3 | protein_coding | 5.57e-11 | 2.55e-08 | 3.54e-02 | -4.819230 | 4.08e+03 | 3.53e+03 | 2.27e+03 | 1.20e+01 | 1.18e+01 | 1.11e+01 | 2.09e+00 | 1.81e+00 | 1.16e+00 | 3.40e+01 | 3.01e+02 | 1.20e+01 | 5.13e+00 | 8.24e+00 | 3.70e+00 | 1.74e-02 | 1.54e-01 | 6.15e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34856374 | 34862518 | ENSMUSG00000090231 | 0.5196 | - | Cfb | protein_coding | 5.88e-11 | 2.63e-08 | 1.70e-02 | -5.879218 | 1.95e+04 | 2.08e+04 | 8.07e+03 | 1.43e+01 | 1.43e+01 | 1.30e+01 | 2.85e+00 | 3.03e+00 | 1.18e+00 | 1.26e+02 | 4.54e+02 | 2.39e+02 | 6.99e+00 | 8.83e+00 | 7.91e+00 | 1.84e-02 | 6.62e-02 | 3.48e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 156804166 | 156939626 | ENSMUSG00000026594 | 0.4130 | - | Ralgps2 | protein_coding | 6.93e-11 | 3.03e-08 | 4.16e+01 | 5.376969 | 4.00e+00 | 0.00e+00 | 2.00e+00 | 2.32e+00 | 0.00e+00 | 1.58e+00 | 1.30e-04 | 0.00e+00 | 6.51e-05 | 1.25e+02 | 1.97e+02 | 4.90e+01 | 6.98e+00 | 7.63e+00 | 5.64e+00 | 4.07e-03 | 6.41e-03 | 1.59e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 65265180 | 65280605 | ENSMUSG00000042254 | 0.4935 | + | Cilp | protein_coding | 1.76e-10 | 7.54e-08 | 3.30e-02 | -4.921926 | 3.27e+02 | 2.87e+02 | 4.44e+02 | 8.36e+00 | 8.17e+00 | 8.80e+00 | 2.95e-02 | 2.58e-02 | 4.00e-02 | 2.00e+00 | 2.90e+01 | 1.00e+00 | 1.58e+00 | 4.91e+00 | 1.00e+00 | 1.80e-04 | 2.61e-03 | 9.01e-05 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 124530345 | 124542359 | ENSMUSG00000038521 | 0.4617 | - | C1s1 | protein_coding | 2.97e-10 | 1.24e-07 | 5.85e-02 | -4.094802 | 9.89e+02 | 1.19e+03 | 7.77e+02 | 9.95e+00 | 1.02e+01 | 9.60e+00 | 1.76e-01 | 2.11e-01 | 1.38e-01 | 1.70e+01 | 6.40e+01 | 8.90e+01 | 4.17e+00 | 6.02e+00 | 6.49e+00 | 3.03e-03 | 1.14e-02 | 1.59e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 71252176 | 71310965 | ENSMUSG00000024053 | 0.4747 | - | Emilin2 | protein_coding | 3.37e-10 | 1.38e-07 | 4.33e-02 | -4.530515 | 2.80e+02 | 2.25e+02 | 3.24e+02 | 8.13e+00 | 7.82e+00 | 8.34e+00 | 1.53e-01 | 1.23e-01 | 1.77e-01 | 6.00e+00 | 1.90e+01 | 8.00e+00 | 2.81e+00 | 4.32e+00 | 3.17e+00 | 3.27e-03 | 1.04e-02 | 4.36e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 151730922 | 151749960 | ENSMUSG00000028037 | 0.3843 | - | Ifi44 | protein_coding | 6.42e-10 | 2.58e-07 | 7.78e-02 | -3.684333 | 3.27e+02 | 5.80e+02 | 3.37e+02 | 8.36e+00 | 9.18e+00 | 8.40e+00 | 7.95e-02 | 1.41e-01 | 8.19e-02 | 2.00e+00 | 1.00e+01 | 8.20e+01 | 1.58e+00 | 3.46e+00 | 6.38e+00 | 4.86e-04 | 2.43e-03 | 1.99e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 32965209 | 32979067 | ENSMUSG00000042842 | 0.4316 | + | Serpinb6b | protein_coding | 6.66e-10 | 2.62e-07 | 3.14e+01 | 4.971986 | 1.00e+00 | 4.00e+00 | 5.00e+00 | 1.00e+00 | 2.32e+00 | 2.58e+00 | 2.88e-04 | 1.15e-03 | 1.44e-03 | 9.50e+01 | 5.30e+01 | 2.57e+02 | 6.58e+00 | 5.75e+00 | 8.01e+00 | 2.73e-02 | 1.53e-02 | 7.40e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 107106570 | 107289629 | ENSMUSG00000029287 | 0.4522 | - | Tgfbr3 | protein_coding | 7.17e-10 | 2.76e-07 | 5.89e-02 | -4.084829 | 6.22e+02 | 1.00e+03 | 5.63e+02 | 9.28e+00 | 9.97e+00 | 9.14e+00 | 8.83e-02 | 1.42e-01 | 7.99e-02 | 1.70e+01 | 6.10e+01 | 4.80e+01 | 4.17e+00 | 5.95e+00 | 5.61e+00 | 2.41e-03 | 8.65e-03 | 6.81e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 74994877 | 74998031 | ENSMUSG00000075602 | 0.4887 | - | Ly6a | protein_coding | 8.04e-10 | 3.03e-07 | 4.79e-02 | -4.385316 | 5.92e+03 | 4.91e+03 | 4.18e+03 | 1.25e+01 | 1.23e+01 | 1.20e+01 | 2.04e+00 | 1.70e+00 | 1.44e+00 | 6.60e+01 | 3.41e+02 | 3.08e+02 | 6.07e+00 | 8.42e+00 | 8.27e+00 | 2.28e-02 | 1.18e-01 | 1.06e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34728380 | 34743882 | ENSMUSG00000073418 | 0.5498 | - | C4b | protein_coding | 9.65e-10 | 3.57e-07 | 6.14e-02 | -4.026104 | 3.80e+02 | 5.77e+02 | 4.90e+02 | 8.57e+00 | 9.17e+00 | 8.94e+00 | 5.29e-02 | 8.03e-02 | 6.82e-02 | 8.00e+00 | 3.30e+01 | 4.50e+01 | 3.17e+00 | 5.09e+00 | 5.52e+00 | 1.11e-03 | 4.59e-03 | 6.26e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 93861306 | 93876494 | ENSMUSG00000094651 | 0.4812 | + | Gal3st2 | protein_coding | 1.16e-09 | 4.20e-07 | 1.83e+01 | 4.190506 | 1.80e+01 | 2.30e+01 | 1.40e+01 | 4.25e+00 | 4.58e+00 | 3.91e+00 | 4.36e-03 | 5.57e-03 | 3.39e-03 | 4.24e+02 | 3.96e+02 | 2.36e+02 | 8.73e+00 | 8.63e+00 | 7.89e+00 | 1.03e-01 | 9.60e-02 | 5.72e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 66924295 | 66945404 | ENSMUSG00000061816 | 0.3829 | - | Myl1 | protein_coding | 1.24e-09 | 4.41e-07 | 1.65e-02 | -5.922832 | 5.10e+01 | 9.30e+01 | 3.50e+01 | 5.70e+00 | 6.55e+00 | 5.17e+00 | 6.47e-03 | 1.18e-02 | 4.44e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 97565501 | 97572703 | ENSMUSG00000036446 | 0.3719 | + | Lum | protein_coding | 1.45e-09 | 5.09e-07 | 6.42e-02 | -3.961160 | 2.83e+02 | 3.51e+02 | 6.09e+02 | 8.15e+00 | 8.46e+00 | 9.25e+00 | 1.48e-01 | 1.84e-01 | 3.20e-01 | 2.00e+00 | 4.50e+01 | 3.00e+01 | 1.58e+00 | 5.52e+00 | 4.95e+00 | 1.05e-03 | 2.36e-02 | 1.57e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 90765923 | 90843971 | ENSMUSG00000048126 | 0.4734 | - | Col6a3 | protein_coding | 1.71e-09 | 5.89e-07 | 6.14e-02 | -4.026704 | 9.74e+02 | 4.76e+02 | 1.55e+03 | 9.93e+00 | 8.90e+00 | 1.06e+01 | 1.18e-01 | 5.77e-02 | 1.87e-01 | 2.40e+01 | 1.20e+02 | 3.70e+01 | 4.64e+00 | 6.92e+00 | 5.25e+00 | 2.91e-03 | 1.45e-02 | 4.48e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 167191805 | 167240604 | ENSMUSG00000017969 | 0.5082 | - | Ptgis | protein_coding | 2.00e-09 | 6.74e-07 | 1.82e+01 | 4.188332 | 3.70e+01 | 6.90e+01 | 1.03e+02 | 5.25e+00 | 6.13e+00 | 6.70e+00 | 8.83e-03 | 1.65e-02 | 2.46e-02 | 1.23e+03 | 1.11e+03 | 1.52e+03 | 1.03e+01 | 1.01e+01 | 1.06e+01 | 2.94e-01 | 2.64e-01 | 3.63e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 92346638 | 92348889 | ENSMUSG00000034855 | 0.4720 | - | Cxcl10 | protein_coding | 2.23e-09 | 7.39e-07 | 5.52e-02 | -4.179511 | 1.45e+02 | 2.22e+02 | 8.30e+01 | 7.19e+00 | 7.80e+00 | 6.39e+00 | 5.54e-02 | 8.48e-02 | 3.17e-02 | 4.00e+00 | 6.00e+00 | 1.20e+01 | 2.32e+00 | 2.81e+00 | 3.70e+00 | 1.53e-03 | 2.29e-03 | 4.59e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 150449412 | 150466165 | ENSMUSG00000006014 | 0.4048 | - | Prg4 | protein_coding | 2.29e-09 | 7.39e-07 | 5.26e-02 | -4.247928 | 2.62e+02 | 1.61e+02 | 4.67e+02 | 8.04e+00 | 7.34e+00 | 8.87e+00 | 6.05e-02 | 3.71e-02 | 1.08e-01 | 9.00e+00 | 2.40e+01 | 1.10e+01 | 3.32e+00 | 4.64e+00 | 3.58e+00 | 2.08e-03 | 5.54e-03 | 2.54e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 116301374 | 116389538 | ENSMUSG00000020154 | 0.4348 | + | Ptprb | protein_coding | 2.30e-09 | 7.39e-07 | 5.07e+01 | 5.662965 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 6.50e+01 | 2.80e+01 | 5.60e+01 | 6.04e+00 | 4.86e+00 | 5.83e+00 | 9.40e-03 | 4.05e-03 | 8.10e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 37804842 | 37808876 | ENSMUSG00000095180 | 0.4709 | + | Rhox5 | protein_coding | 2.52e-09 | 7.96e-07 | 4.08e+01 | 5.348728 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.32e-04 | 0.00e+00 | 6.00e+01 | 5.50e+01 | 4.50e+01 | 5.93e+00 | 5.81e+00 | 5.52e+00 | 4.39e-02 | 4.03e-02 | 3.29e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 54054928 | 54069014 | ENSMUSG00000020388 | 0.5357 | - | Pdlim4 | protein_coding | 2.91e-09 | 9.03e-07 | 5.69e-02 | -4.134674 | 8.07e+02 | 1.01e+03 | 7.23e+02 | 9.66e+00 | 9.99e+00 | 9.50e+00 | 1.54e-01 | 1.93e-01 | 1.38e-01 | 2.40e+01 | 1.13e+02 | 5.00e+00 | 4.64e+00 | 6.83e+00 | 2.58e+00 | 4.57e-03 | 2.15e-02 | 9.51e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 46740497 | 46742980 | ENSMUSG00000074115 | 0.5382 | - | Saa1 | protein_coding | 2.99e-09 | 9.13e-07 | 2.09e-02 | -5.578939 | 5.80e+01 | 4.80e+01 | 1.30e+02 | 5.88e+00 | 5.61e+00 | 7.03e+00 | 3.97e-02 | 3.29e-02 | 8.90e-02 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 6.84e-04 | 0.00e+00 | 6.84e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 109575128 | 109579172 | ENSMUSG00000031722 | 0.5125 | - | Hp | protein_coding | 3.12e-09 | 9.38e-07 | 4.56e-02 | -4.453367 | 3.86e+03 | 7.02e+03 | 3.60e+03 | 1.19e+01 | 1.28e+01 | 1.18e+01 | 1.36e+00 | 2.47e+00 | 1.27e+00 | 1.18e+02 | 4.05e+02 | 1.35e+02 | 6.89e+00 | 8.67e+00 | 7.09e+00 | 4.15e-02 | 1.42e-01 | 4.75e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 12936096 | 12941914 | ENSMUSG00000037169 | 0.5281 | - | Mycn | protein_coding | 3.48e-09 | 1.03e-06 | 5.80e+01 | 5.857981 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 2.93e-04 | 8.20e+01 | 7.00e+01 | 7.70e+01 | 6.38e+00 | 6.15e+00 | 6.29e+00 | 2.40e-02 | 2.05e-02 | 2.25e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 71215789 | 71296243 | ENSMUSG00000013584 | 0.4211 | + | Aldh1a2 | protein_coding | 3.83e-09 | 1.12e-06 | 5.86e-02 | -4.092671 | 1.62e+03 | 2.04e+03 | 5.03e+02 | 1.07e+01 | 1.10e+01 | 8.98e+00 | 5.58e-01 | 7.02e-01 | 1.73e-01 | 1.10e+01 | 1.72e+02 | 5.80e+01 | 3.58e+00 | 7.43e+00 | 5.88e+00 | 3.79e-03 | 5.93e-02 | 2.00e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 71957921 | 71963723 | ENSMUSG00000060969 | 0.5346 | - | Irx1 | protein_coding | 4.01e-09 | 1.13e-06 | 4.51e-02 | -4.471785 | 3.40e+02 | 3.92e+02 | 8.60e+01 | 8.41e+00 | 8.62e+00 | 6.44e+00 | 1.74e-01 | 2.01e-01 | 4.41e-02 | 1.00e+00 | 3.30e+01 | 0.00e+00 | 1.00e+00 | 5.09e+00 | 0.00e+00 | 5.13e-04 | 1.69e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 104214544 | 104221129 | ENSMUSG00000066363 | 0.4737 | + | Serpina3f | protein_coding | 4.02e-09 | 1.13e-06 | 2.46e-02 | -5.343408 | 3.70e+01 | 1.12e+02 | 5.10e+01 | 5.25e+00 | 6.82e+00 | 5.70e+00 | 1.98e-02 | 5.99e-02 | 2.73e-02 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 5.35e-04 | 5.35e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 80411970 | 80447625 | ENSMUSG00000027004 | 0.4146 | - | Frzb | protein_coding | 4.06e-09 | 1.13e-06 | 1.77e+01 | 4.147620 | 1.09e+02 | 1.50e+02 | 2.16e+02 | 6.78e+00 | 7.24e+00 | 7.76e+00 | 4.12e-02 | 5.67e-02 | 8.16e-02 | 3.46e+03 | 2.79e+03 | 2.22e+03 | 1.18e+01 | 1.14e+01 | 1.11e+01 | 1.31e+00 | 1.05e+00 | 8.37e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164940780 | 164955850 | ENSMUSG00000017737 | 0.5213 | + | Mmp9 | protein_coding | 4.18e-09 | 1.15e-06 | 5.08e-02 | -4.298873 | 3.10e+02 | 4.01e+02 | 9.30e+01 | 8.28e+00 | 8.65e+00 | 6.55e+00 | 6.59e-02 | 8.52e-02 | 1.98e-02 | 1.00e+01 | 2.70e+01 | 1.00e+00 | 3.46e+00 | 4.81e+00 | 1.00e+00 | 2.12e-03 | 5.74e-03 | 2.12e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 90724554 | 90738438 | ENSMUSG00000007682 | 0.4209 | - | Dio2 | protein_coding | 4.24e-09 | 1.15e-06 | 5.36e-02 | -4.220876 | 5.50e+01 | 8.50e+01 | 1.74e+02 | 5.81e+00 | 6.43e+00 | 7.45e+00 | 9.00e-03 | 1.39e-02 | 2.85e-02 | 1.00e+00 | 5.00e+00 | 8.00e+00 | 1.00e+00 | 2.58e+00 | 3.17e+00 | 1.64e-04 | 8.18e-04 | 1.31e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 10153571 | 10256529 | ENSMUSG00000025780 | 0.4401 | + | Itih5 | protein_coding | 4.47e-09 | 1.20e-06 | 5.50e-02 | -4.183222 | 6.90e+01 | 2.14e+02 | 1.50e+02 | 6.13e+00 | 7.75e+00 | 7.24e+00 | 1.11e-02 | 3.45e-02 | 2.42e-02 | 3.00e+00 | 1.00e+01 | 8.00e+00 | 2.00e+00 | 3.46e+00 | 3.17e+00 | 4.84e-04 | 1.61e-03 | 1.29e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 103510586 | 103750211 | ENSMUSG00000030077 | 0.3788 | + | Chl1 | protein_coding | 5.63e-09 | 1.48e-06 | 3.74e-02 | -4.739781 | 2.65e+02 | 4.32e+02 | 1.55e+02 | 8.06e+00 | 8.76e+00 | 7.29e+00 | 2.86e-02 | 4.67e-02 | 1.68e-02 | 2.00e+00 | 2.60e+01 | 1.00e+00 | 1.58e+00 | 4.75e+00 | 1.00e+00 | 2.16e-04 | 2.81e-03 | 1.08e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 144729677 | 144760977 | ENSMUSG00000056025 | 0.4089 | - | Clca3a1 | protein_coding | 6.52e-09 | 1.70e-06 | 2.06e+01 | 4.361456 | 3.00e+00 | 8.00e+00 | 1.30e+01 | 2.00e+00 | 3.17e+00 | 3.81e+00 | 4.14e-04 | 1.10e-03 | 1.79e-03 | 1.18e+02 | 2.88e+02 | 1.46e+02 | 6.89e+00 | 8.17e+00 | 7.20e+00 | 1.63e-02 | 3.97e-02 | 2.01e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 165595032 | 165771727 | ENSMUSG00000017897 | 0.4927 | + | Eya2 | protein_coding | 7.74e-09 | 1.99e-06 | 5.70e-02 | -4.132104 | 5.21e+02 | 4.23e+02 | 3.33e+02 | 9.03e+00 | 8.73e+00 | 8.38e+00 | 9.26e-02 | 7.51e-02 | 5.92e-02 | 1.50e+01 | 4.20e+01 | 1.30e+01 | 4.00e+00 | 5.43e+00 | 3.81e+00 | 2.66e-03 | 7.46e-03 | 2.31e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 141165403 | 141474076 | ENSMUSG00000031273 | 0.3968 | - | Col4a6 | protein_coding | 8.31e-09 | 2.10e-06 | 4.12e+01 | 5.363405 | 0.00e+00 | 2.00e+00 | 1.00e+00 | 0.00e+00 | 1.58e+00 | 1.00e+00 | 0.00e+00 | 3.94e-04 | 1.97e-04 | 7.30e+01 | 6.60e+01 | 1.05e+02 | 6.21e+00 | 6.07e+00 | 6.73e+00 | 1.44e-02 | 1.30e-02 | 2.07e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 109452823 | 109463336 | ENSMUSG00000040856 | 0.5354 | + | Dlk1 | protein_coding | 8.57e-09 | 2.14e-06 | 4.21e-02 | -4.570226 | 2.83e+02 | 8.40e+01 | 6.04e+02 | 8.15e+00 | 6.41e+00 | 9.24e+00 | 4.20e-02 | 1.25e-02 | 8.96e-02 | 1.60e+01 | 1.50e+01 | 7.00e+00 | 4.09e+00 | 4.00e+00 | 3.00e+00 | 2.37e-03 | 2.23e-03 | 1.04e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 153740349 | 153745468 | ENSMUSG00000026475 | 0.5045 | + | Rgs16 | protein_coding | 8.66e-09 | 2.14e-06 | 1.89e+01 | 4.238353 | 1.53e+02 | 1.51e+02 | 5.90e+01 | 7.27e+00 | 7.25e+00 | 5.91e+00 | 5.34e-02 | 5.27e-02 | 2.06e-02 | 3.60e+01 | 4.80e+01 | 6.82e+03 | 5.21e+00 | 5.61e+00 | 1.27e+01 | 1.26e-02 | 1.67e-02 | 2.38e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 107397099 | 107403376 | ENSMUSG00000031239 | 0.3633 | - | Itm2a | protein_coding | 9.68e-09 | 2.36e-06 | 4.35e-02 | -4.523562 | 3.13e+02 | 1.13e+02 | 2.15e+02 | 8.29e+00 | 6.83e+00 | 7.75e+00 | 1.53e-01 | 5.52e-02 | 1.05e-01 | 1.00e+00 | 1.50e+01 | 9.00e+00 | 1.00e+00 | 4.00e+00 | 3.32e+00 | 4.89e-04 | 7.33e-03 | 4.40e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 27334264 | 27342574 | ENSMUSG00000063632 | 0.4648 | - | Sox11 | protein_coding | 1.14e-08 | 2.75e-06 | 9.53e-02 | -3.390915 | 7.00e+01 | 4.32e+02 | 5.23e+02 | 6.15e+00 | 8.76e+00 | 9.03e+00 | 8.80e-03 | 5.43e-02 | 6.57e-02 | 4.00e+00 | 4.20e+01 | 4.90e+01 | 2.32e+00 | 5.43e+00 | 5.64e+00 | 5.03e-04 | 5.28e-03 | 6.16e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 10204088 | 10208576 | ENSMUSG00000062515 | 0.4219 | - | Fabp4 | protein_coding | 1.20e-08 | 2.84e-06 | 7.38e-02 | -3.761185 | 5.62e+02 | 7.58e+02 | 3.99e+02 | 9.14e+00 | 9.57e+00 | 8.64e+00 | 3.33e-01 | 4.50e-01 | 2.37e-01 | 3.10e+01 | 3.10e+01 | 6.20e+01 | 5.00e+00 | 5.00e+00 | 5.98e+00 | 1.84e-02 | 1.84e-02 | 3.68e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 87948666 | 87953376 | ENSMUSG00000004885 | 0.5245 | + | Crabp2 | protein_coding | 1.35e-08 | 3.18e-06 | 5.24e-02 | -4.252981 | 1.11e+02 | 5.80e+01 | 1.14e+02 | 6.81e+00 | 5.88e+00 | 6.85e+00 | 6.75e-02 | 3.53e-02 | 6.93e-02 | 1.00e+00 | 4.00e+00 | 7.00e+00 | 1.00e+00 | 2.32e+00 | 3.00e+00 | 6.08e-04 | 2.43e-03 | 4.26e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56129556 | 56132608 | ENSMUSG00000059256 | 0.4923 | - | Gzmd | protein_coding | 1.70e-08 | 3.94e-06 | 3.31e-02 | -4.918863 | 5.70e+01 | 4.40e+01 | 1.70e+01 | 5.86e+00 | 5.49e+00 | 4.17e+00 | 4.15e-02 | 3.20e-02 | 1.24e-02 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.28e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 92483952 | 92485895 | ENSMUSG00000050359 | 0.4573 | - | Sprr1a | protein_coding | 2.11e-08 | 4.84e-06 | 3.15e+01 | 4.977280 | 0.00e+00 | 3.00e+00 | 4.00e+00 | 0.00e+00 | 2.00e+00 | 2.32e+00 | 0.00e+00 | 1.92e-03 | 2.56e-03 | 9.30e+01 | 6.30e+01 | 1.56e+02 | 6.55e+00 | 6.00e+00 | 7.29e+00 | 5.96e-02 | 4.04e-02 | 1.00e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 83766321 | 83774316 | ENSMUSG00000027996 | 0.4816 | + | Sfrp2 | protein_coding | 2.17e-08 | 4.89e-06 | 7.21e-02 | -3.794332 | 3.84e+03 | 3.87e+03 | 3.10e+03 | 1.19e+01 | 1.19e+01 | 1.16e+01 | 8.25e-01 | 8.31e-01 | 6.65e-01 | 5.00e+01 | 5.39e+02 | 1.87e+02 | 5.67e+00 | 9.08e+00 | 7.55e+00 | 1.07e-02 | 1.16e-01 | 4.02e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 56477846 | 56690128 | ENSMUSG00000035258 | 0.3922 | + | Abi3bp | protein_coding | 2.19e-08 | 4.89e-06 | 7.47e-02 | -3.743492 | 6.68e+02 | 7.54e+02 | 1.16e+03 | 9.39e+00 | 9.56e+00 | 1.02e+01 | 2.86e-01 | 3.23e-01 | 4.97e-01 | 2.00e+00 | 1.88e+02 | 0.00e+00 | 1.58e+00 | 7.56e+00 | 0.00e+00 | 8.57e-04 | 8.06e-02 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 56288647 | 56296551 | ENSMUSG00000021508 | 0.5293 | - | Cxcl14 | protein_coding | 2.32e-08 | 5.14e-06 | 4.35e-02 | -4.523562 | 8.95e+03 | 3.66e+03 | 3.83e+03 | 1.31e+01 | 1.18e+01 | 1.19e+01 | 3.73e+00 | 1.52e+00 | 1.60e+00 | 1.27e+02 | 5.49e+02 | 3.60e+01 | 7.00e+00 | 9.10e+00 | 5.21e+00 | 5.29e-02 | 2.29e-01 | 1.50e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 60174405 | 60177365 | ENSMUSG00000052957 | 0.5836 | - | Gas1 | protein_coding | 2.41e-08 | 5.28e-06 | 6.77e-02 | -3.884864 | 7.01e+02 | 4.61e+02 | 4.60e+02 | 9.46e+00 | 8.85e+00 | 8.85e+00 | 2.94e-01 | 1.94e-01 | 1.93e-01 | 5.00e+00 | 8.70e+01 | 1.50e+01 | 2.58e+00 | 6.46e+00 | 4.00e+00 | 2.10e-03 | 3.65e-02 | 6.30e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 30172593 | 31029311 | ENSMUSG00000022240 | 0.4097 | + | Ctnnd2 | protein_coding | 2.44e-08 | 5.29e-06 | 4.70e+01 | 5.554589 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 6.80e+01 | 4.10e+01 | 2.90e+01 | 6.11e+00 | 5.39e+00 | 4.91e+00 | 2.35e-02 | 1.42e-02 | 1.00e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 120729489 | 120732114 | ENSMUSG00000025150 | 0.5678 | - | Cbr2 | protein_coding | 2.55e-08 | 5.45e-06 | 7.05e-02 | -3.825624 | 1.80e+03 | 2.58e+03 | 2.06e+03 | 1.08e+01 | 1.13e+01 | 1.10e+01 | 6.42e-01 | 9.22e-01 | 7.36e-01 | 9.80e+01 | 2.81e+02 | 7.20e+01 | 6.63e+00 | 8.14e+00 | 6.19e+00 | 3.50e-02 | 1.00e-01 | 2.57e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 78175959 | 78738012 | ENSMUSG00000059146 | 0.4391 | - | Ntrk3 | protein_coding | 2.59e-08 | 5.48e-06 | 4.02e-02 | -4.637430 | 1.00e+02 | 1.68e+02 | 1.77e+02 | 6.66e+00 | 7.40e+00 | 7.48e+00 | 2.45e-03 | 4.12e-03 | 4.34e-03 | 1.00e+00 | 1.30e+01 | 1.00e+00 | 1.00e+00 | 3.81e+00 | 1.00e+00 | 2.45e-05 | 3.19e-04 | 2.45e-05 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 24336853 | 24351494 | ENSMUSG00000026981 | 0.4277 | + | Il1rn | protein_coding | 2.90e-08 | 6.05e-06 | 6.52e-02 | -3.940090 | 5.01e+03 | 4.63e+03 | 2.62e+03 | 1.23e+01 | 1.22e+01 | 1.14e+01 | 8.59e-01 | 7.94e-01 | 4.48e-01 | 3.50e+01 | 7.19e+02 | 4.20e+01 | 5.17e+00 | 9.49e+00 | 5.43e+00 | 6.00e-03 | 1.23e-01 | 7.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 184610280 | 184629473 | ENSMUSG00000103308 | 0.4423 | - | Gm37800 | lincRNA | 2.92e-08 | 6.05e-06 | 3.02e-02 | -5.051662 | 1.68e+02 | 1.49e+02 | 7.80e+01 | 7.40e+00 | 7.23e+00 | 6.30e+00 | 6.70e-02 | 5.94e-02 | 3.11e-02 | 2.00e+00 | 4.00e+00 | 3.00e+00 | 1.58e+00 | 2.32e+00 | 2.00e+00 | 7.97e-04 | 1.59e-03 | 1.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 56609603 | 56639339 | ENSMUSG00000035493 | 0.5059 | + | Tgfbi | protein_coding | 3.20e-08 | 6.55e-06 | 4.30e-02 | -4.538538 | 2.23e+02 | 1.14e+02 | 2.41e+02 | 7.81e+00 | 6.85e+00 | 7.92e+00 | 1.21e-01 | 6.21e-02 | 1.31e-01 | 6.00e+00 | 1.20e+01 | 4.00e+00 | 2.81e+00 | 3.70e+00 | 2.32e+00 | 3.27e-03 | 6.54e-03 | 2.18e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 49681560 | 49783383 | ENSMUSG00000036242 | 0.4023 | - | 3632451O06Rik | protein_coding | 3.26e-08 | 6.61e-06 | 5.29e-02 | -4.239466 | 2.91e+02 | 1.58e+02 | 3.98e+02 | 8.19e+00 | 7.31e+00 | 8.64e+00 | 8.83e-02 | 4.79e-02 | 1.21e-01 | 3.00e+00 | 3.50e+01 | 4.00e+00 | 2.00e+00 | 5.17e+00 | 2.32e+00 | 9.10e-04 | 1.06e-02 | 1.21e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 92570902 | 92573735 | ENSMUSG00000049128 | 0.4891 | - | Ivl | protein_coding | 3.77e-08 | 7.56e-06 | 4.67e+01 | 5.544321 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 2.60e+01 | 6.10e+01 | 5.00e+01 | 4.75e+00 | 5.95e+00 | 5.67e+00 | 1.53e-02 | 3.58e-02 | 2.94e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group1_vs_group5.Download the whole result list for group1_vs_group5.DEG table for the contrast group2_vs_group6The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group2_vs_group6. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group2_vs_group6 | log2_normalized_fold_change_group2_vs_group6 | natural_normalized_counts_4_Tg197_1_SFs | natural_normalized_counts_5_Tg197_2_SFs | natural_normalized_counts_6_Tg197_3_SFs | log2_normalized_counts_4_Tg197_1_SFs | log2_normalized_counts_5_Tg197_2_SFs | log2_normalized_counts_6_Tg197_3_SFs | rpgm_normalized_counts_4_Tg197_1_SFs | rpgm_normalized_counts_5_Tg197_2_SFs | rpgm_normalized_counts_6_Tg197_3_SFs | natural_normalized_counts_15_Tg197_1_VICs | natural_normalized_counts_16_Tg197_2_VICs | natural_normalized_counts_17_Tg197_3_VICs | log2_normalized_counts_15_Tg197_1_VICs | log2_normalized_counts_16_Tg197_2_VICs | log2_normalized_counts_17_Tg197_3_VICs | rpgm_normalized_counts_15_Tg197_1_VICs | rpgm_normalized_counts_16_Tg197_2_VICs | rpgm_normalized_counts_17_Tg197_3_VICs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr9 | 24718138 | 24774303 | ENSMUSG00000031965 | 0.4010 | - | Tbx20 | protein_coding | 1.00e-23 | 1.93e-19 | 3.64e+02 | 8.50743 | 2.00e+00 | 0.00e+00 | 6.00e+00 | 1.58e+00 | 0.00e+00 | 2.81e+00 | 1.57e-04 | 0.00e+00 | 4.70e-04 | 8.78e+02 | 1.55e+03 | 1.57e+03 | 9.78e+00 | 1.06e+01 | 1.06e+01 | 6.87e-02 | 1.21e-01 | 1.23e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56117619 | 56120625 | ENSMUSG00000022156 | 0.4865 | - | Gzme | protein_coding | 1.09e-21 | 7.61e-18 | 5.15e-03 | -7.60140 | 9.90e+02 | 1.25e+03 | 6.67e+02 | 9.95e+00 | 1.03e+01 | 9.38e+00 | 7.27e-01 | 9.21e-01 | 4.90e-01 | 2.00e+00 | 1.00e+01 | 0.00e+00 | 1.58e+00 | 3.46e+00 | 0.00e+00 | 1.47e-03 | 7.35e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 136038496 | 136046487 | ENSMUSG00000042985 | 0.5240 | + | Upk3b | protein_coding | 1.19e-21 | 7.61e-18 | 4.46e+02 | 8.80090 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 7.50e+02 | 2.97e+02 | 2.88e+02 | 9.55e+00 | 8.22e+00 | 8.17e+00 | 2.06e-01 | 8.14e-02 | 7.90e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36450537 | 36455392 | ENSMUSG00000054905 | 0.4016 | - | Stfa3 | protein_coding | 1.11e-20 | 5.33e-17 | 2.45e-03 | -8.67125 | 8.81e+02 | 2.48e+02 | 9.10e+01 | 9.78e+00 | 7.96e+00 | 6.52e+00 | 6.64e-01 | 1.87e-01 | 6.86e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 7272514 | 7283331 | ENSMUSG00000050578 | 0.3772 | + | Mmp13 | protein_coding | 1.33e-18 | 5.13e-15 | 8.15e-03 | -6.93832 | 7.27e+02 | 8.35e+02 | 1.87e+03 | 9.51e+00 | 9.71e+00 | 1.09e+01 | 2.95e-01 | 3.38e-01 | 7.58e-01 | 9.00e+00 | 5.00e+00 | 1.10e+01 | 3.32e+00 | 2.58e+00 | 3.58e+00 | 3.65e-03 | 2.03e-03 | 4.46e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 40429570 | 40465415 | ENSMUSG00000026069 | 0.4155 | + | Il1rl1 | protein_coding | 8.83e-18 | 2.83e-14 | 1.16e-02 | -6.42682 | 1.37e+03 | 6.91e+02 | 5.19e+02 | 1.04e+01 | 9.43e+00 | 9.02e+00 | 1.62e-01 | 8.18e-02 | 6.14e-02 | 1.50e+01 | 3.00e+00 | 9.00e+00 | 4.00e+00 | 2.00e+00 | 3.32e+00 | 1.77e-03 | 3.55e-04 | 1.06e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 56477846 | 56690128 | ENSMUSG00000035258 | 0.3922 | + | Abi3bp | protein_coding | 4.00e-17 | 1.10e-13 | 1.09e-02 | -6.51642 | 3.28e+02 | 3.75e+02 | 3.01e+02 | 8.36e+00 | 8.55e+00 | 8.24e+00 | 1.41e-01 | 1.61e-01 | 1.29e-01 | 1.00e+00 | 5.00e+00 | 2.00e+00 | 1.00e+00 | 2.58e+00 | 1.58e+00 | 4.29e-04 | 2.14e-03 | 8.57e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 70373558 | 70382066 | ENSMUSG00000031849 | 0.5643 | + | Comp | protein_coding | 1.25e-16 | 3.00e-13 | 1.28e-02 | -6.29108 | 3.53e+02 | 1.41e+02 | 5.21e+02 | 8.47e+00 | 7.15e+00 | 9.03e+00 | 5.70e-02 | 2.28e-02 | 8.41e-02 | 7.00e+00 | 1.00e+00 | 2.00e+00 | 3.00e+00 | 1.00e+00 | 1.58e+00 | 1.13e-03 | 1.61e-04 | 3.23e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56231401 | 56234656 | ENSMUSG00000079186 | 0.4877 | - | Gzmc | protein_coding | 1.80e-16 | 3.84e-13 | 8.59e-03 | -6.86295 | 2.12e+02 | 3.48e+02 | 1.90e+01 | 7.73e+00 | 8.45e+00 | 4.32e+00 | 1.55e-01 | 2.55e-01 | 1.39e-02 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 7.32e-04 | 7.32e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52244393 | 52249799 | ENSMUSG00000086427 | 0.5302 | + | Hoxa11os | processed_transcript | 2.96e-16 | 5.70e-13 | 8.58e-03 | -6.86542 | 2.48e+02 | 2.31e+02 | 1.01e+02 | 7.96e+00 | 7.86e+00 | 6.67e+00 | 9.77e-02 | 9.10e-02 | 3.98e-02 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 7.88e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 103513341 | 103613346 | ENSMUSG00000022123 | 0.4082 | + | Scel | protein_coding | 4.48e-16 | 7.84e-13 | 1.25e+02 | 6.96083 | 4.00e+00 | 0.00e+00 | 0.00e+00 | 2.32e+00 | 0.00e+00 | 0.00e+00 | 1.82e-03 | 0.00e+00 | 0.00e+00 | 2.44e+02 | 2.85e+02 | 3.40e+02 | 7.94e+00 | 8.16e+00 | 8.41e+00 | 1.11e-01 | 1.29e-01 | 1.54e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36184212 | 36188111 | ENSMUSG00000079597 | 0.3918 | + | Gm5483 | protein_coding | 4.72e-15 | 7.57e-12 | 4.57e-03 | -7.77479 | 3.55e+02 | 2.14e+02 | 8.50e+01 | 8.48e+00 | 7.75e+00 | 6.43e+00 | 2.68e-01 | 1.61e-01 | 6.41e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 120729489 | 120732114 | ENSMUSG00000025150 | 0.5678 | - | Cbr2 | protein_coding | 6.06e-15 | 8.98e-12 | 1.56e-02 | -6.00601 | 1.27e+03 | 9.68e+02 | 6.18e+03 | 1.03e+01 | 9.92e+00 | 1.26e+01 | 4.54e-01 | 3.46e-01 | 2.21e+00 | 4.80e+01 | 2.30e+01 | 5.70e+01 | 5.61e+00 | 4.58e+00 | 5.86e+00 | 1.72e-02 | 8.22e-03 | 2.04e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56365068 | 56388551 | ENSMUSG00000022229 | 0.4575 | + | Atp12a | protein_coding | 7.11e-15 | 9.78e-12 | 1.19e-02 | -6.38802 | 1.91e+02 | 9.80e+01 | 4.30e+01 | 7.58e+00 | 6.63e+00 | 5.46e+00 | 1.01e-01 | 5.20e-02 | 2.28e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 5.31e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 92750148 | 92752338 | ENSMUSG00000027919 | 0.4350 | - | Lce1g | protein_coding | 1.40e-14 | 1.72e-11 | 1.13e+02 | 6.81506 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 1.19e-03 | 0.00e+00 | 1.21e+02 | 2.40e+01 | 4.15e+02 | 6.93e+00 | 4.64e+00 | 8.70e+00 | 7.18e-02 | 1.42e-02 | 2.46e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 104435118 | 104441050 | ENSMUSG00000029304 | 0.3787 | + | Spp1 | protein_coding | 1.43e-14 | 1.72e-11 | 2.17e-02 | -5.52895 | 1.20e+03 | 1.80e+03 | 1.29e+03 | 1.02e+01 | 1.08e+01 | 1.03e+01 | 2.83e-01 | 4.26e-01 | 3.05e-01 | 5.00e+01 | 2.60e+01 | 1.40e+01 | 5.67e+00 | 4.75e+00 | 3.91e+00 | 1.18e-02 | 6.14e-03 | 3.31e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 143078473 | 143081713 | ENSMUSG00000027416 | 0.3891 | + | Otor | protein_coding | 4.47e-14 | 5.06e-11 | 1.20e-02 | -6.37504 | 1.56e+02 | 1.27e+02 | 1.29e+02 | 7.29e+00 | 7.00e+00 | 7.02e+00 | 8.72e-02 | 7.10e-02 | 7.21e-02 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 1.12e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74668310 | 74671599 | ENSMUSG00000001819 | 0.4617 | + | Hoxd13 | protein_coding | 1.48e-13 | 1.53e-10 | 9.69e-03 | -6.69000 | 1.07e+02 | 1.77e+02 | 1.26e+02 | 6.75e+00 | 7.48e+00 | 6.99e+00 | 3.94e-02 | 6.51e-02 | 4.64e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.68e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 133850980 | 133865577 | ENSMUSG00000031250 | 0.4123 | + | Tnmd | protein_coding | 1.51e-13 | 1.53e-10 | 1.83e-02 | -5.76907 | 2.10e+02 | 2.22e+02 | 3.83e+02 | 7.72e+00 | 7.80e+00 | 8.58e+00 | 1.47e-01 | 1.56e-01 | 2.69e-01 | 9.00e+00 | 1.00e+00 | 2.00e+00 | 3.32e+00 | 1.00e+00 | 1.58e+00 | 6.31e-03 | 7.01e-04 | 1.40e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 22817279 | 22820128 | ENSMUSG00000045680 | 0.4958 | - | Tcf21 | protein_coding | 1.60e-13 | 1.54e-10 | 9.30e+01 | 6.53916 | 0.00e+00 | 0.00e+00 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.75e-03 | 1.36e+02 | 2.92e+02 | 1.27e+02 | 7.10e+00 | 8.19e+00 | 7.00e+00 | 7.94e-02 | 1.71e-01 | 7.42e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 54054928 | 54069014 | ENSMUSG00000020388 | 0.5357 | - | Pdlim4 | protein_coding | 2.12e-13 | 1.94e-10 | 3.13e-02 | -4.99607 | 1.04e+03 | 8.17e+02 | 1.08e+03 | 1.00e+01 | 9.68e+00 | 1.01e+01 | 1.98e-01 | 1.55e-01 | 2.05e-01 | 5.80e+01 | 2.40e+01 | 7.00e+00 | 5.88e+00 | 4.64e+00 | 3.00e+00 | 1.10e-02 | 4.57e-03 | 1.33e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52223100 | 52231089 | ENSMUSG00000038227 | 0.5144 | - | Hoxa9 | protein_coding | 2.28e-13 | 1.99e-10 | 1.02e-02 | -6.61961 | 8.60e+01 | 1.39e+02 | 6.70e+01 | 6.44e+00 | 7.13e+00 | 6.09e+00 | 1.73e-02 | 2.79e-02 | 1.35e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56129556 | 56132608 | ENSMUSG00000059256 | 0.4923 | - | Gzmd | protein_coding | 2.63e-13 | 2.20e-10 | 7.83e-03 | -6.99624 | 1.08e+02 | 2.31e+02 | 4.10e+01 | 6.77e+00 | 7.86e+00 | 5.39e+00 | 7.87e-02 | 1.68e-01 | 2.99e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164940780 | 164955850 | ENSMUSG00000017737 | 0.5213 | + | Mmp9 | protein_coding | 3.40e-13 | 2.73e-10 | 3.91e-02 | -4.67695 | 6.86e+03 | 1.99e+03 | 1.69e+03 | 1.27e+01 | 1.10e+01 | 1.07e+01 | 1.46e+00 | 4.22e-01 | 3.58e-01 | 3.80e+02 | 1.40e+01 | 1.50e+01 | 8.57e+00 | 3.91e+00 | 4.00e+00 | 8.07e-02 | 2.97e-03 | 3.19e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 22985854 | 23029101 | ENSMUSG00000060459 | 0.4230 | - | Kng2 | protein_coding | 4.61e-13 | 3.55e-10 | 1.67e-02 | -5.90087 | 7.80e+01 | 6.10e+01 | 9.70e+01 | 6.30e+00 | 5.95e+00 | 6.61e+00 | 8.20e-03 | 6.41e-03 | 1.02e-02 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.05e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 36111965 | 36119844 | ENSMUSG00000024803 | 0.4397 | - | Ankrd1 | protein_coding | 5.64e-13 | 4.17e-10 | 6.75e+01 | 6.07691 | 4.60e+01 | 1.10e+02 | 1.84e+02 | 5.55e+00 | 6.79e+00 | 7.53e+00 | 2.30e-02 | 5.51e-02 | 9.22e-02 | 5.27e+03 | 6.37e+03 | 1.15e+04 | 1.24e+01 | 1.26e+01 | 1.35e+01 | 2.64e+00 | 3.19e+00 | 5.77e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 93014205 | 93015687 | ENSMUSG00000027913 | 0.4990 | - | Crct1 | protein_coding | 6.37e-13 | 4.54e-10 | 3.14e+01 | 4.97495 | 1.60e+01 | 2.00e+01 | 3.00e+01 | 4.09e+00 | 4.39e+00 | 4.95e+00 | 1.02e-02 | 1.27e-02 | 1.91e-02 | 5.91e+02 | 2.94e+02 | 1.28e+03 | 9.21e+00 | 8.20e+00 | 1.03e+01 | 3.77e-01 | 1.87e-01 | 8.17e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 33027416 | 33041884 | ENSMUSG00000021403 | 0.4160 | + | Serpinb9b | protein_coding | 7.78e-13 | 5.35e-10 | 3.29e+01 | 5.04041 | 2.20e+01 | 2.00e+01 | 1.00e+01 | 4.52e+00 | 4.39e+00 | 3.46e+00 | 6.92e-03 | 6.29e-03 | 3.15e-03 | 4.72e+02 | 4.76e+02 | 8.59e+02 | 8.89e+00 | 8.90e+00 | 9.75e+00 | 1.49e-01 | 1.50e-01 | 2.70e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56082166 | 56085216 | ENSMUSG00000022157 | 0.4569 | - | Mcpt8 | protein_coding | 1.00e-12 | 6.65e-10 | 3.56e-02 | -4.81027 | 9.55e+02 | 4.41e+02 | 8.80e+01 | 9.90e+00 | 8.79e+00 | 6.48e+00 | 7.15e-01 | 3.30e-01 | 6.59e-02 | 2.30e+01 | 2.10e+01 | 6.00e+00 | 4.58e+00 | 4.46e+00 | 2.81e+00 | 1.72e-02 | 1.57e-02 | 4.49e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 20601961 | 20643462 | ENSMUSG00000053279 | 0.3766 | + | Aldh1a1 | protein_coding | 1.10e-12 | 7.09e-10 | 3.02e+01 | 4.91654 | 3.10e+01 | 4.60e+01 | 7.40e+01 | 5.00e+00 | 5.55e+00 | 6.23e+00 | 1.77e-02 | 2.63e-02 | 4.23e-02 | 1.08e+03 | 1.11e+03 | 2.46e+03 | 1.01e+01 | 1.01e+01 | 1.13e+01 | 6.16e-01 | 6.33e-01 | 1.41e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52242106 | 52245810 | ENSMUSG00000038210 | 0.5282 | - | Hoxa11 | protein_coding | 1.31e-12 | 8.16e-10 | 1.17e-02 | -6.41363 | 9.40e+01 | 1.46e+02 | 9.80e+01 | 6.57e+00 | 7.20e+00 | 6.63e+00 | 3.75e-02 | 5.82e-02 | 3.91e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.99e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52231197 | 52240854 | ENSMUSG00000000938 | 0.5046 | - | Hoxa10 | protein_coding | 1.52e-12 | 9.15e-10 | 1.13e-02 | -6.47168 | 1.13e+02 | 1.22e+02 | 1.17e+02 | 6.83e+00 | 6.94e+00 | 6.88e+00 | 4.41e-02 | 4.76e-02 | 4.56e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.90e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 63198922 | 63271692 | ENSMUSG00000021944 | 0.4731 | - | Gata4 | protein_coding | 1.64e-12 | 9.56e-10 | 1.26e+02 | 6.97346 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 1.10e+02 | 1.92e+02 | 7.20e+01 | 6.79e+00 | 7.59e+00 | 6.19e+00 | 2.77e-02 | 4.83e-02 | 1.81e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 56288647 | 56296551 | ENSMUSG00000021508 | 0.5293 | - | Cxcl14 | protein_coding | 4.83e-12 | 2.73e-09 | 2.62e-02 | -5.25283 | 7.56e+03 | 8.10e+03 | 1.42e+03 | 1.29e+01 | 1.30e+01 | 1.05e+01 | 3.15e+00 | 3.38e+00 | 5.91e-01 | 3.82e+02 | 4.50e+01 | 1.80e+01 | 8.58e+00 | 5.52e+00 | 4.25e+00 | 1.59e-01 | 1.88e-02 | 7.50e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 90765923 | 90843971 | ENSMUSG00000048126 | 0.4734 | - | Col6a3 | protein_coding | 5.37e-12 | 2.95e-09 | 3.29e-02 | -4.92481 | 4.01e+02 | 5.23e+02 | 2.88e+02 | 8.65e+00 | 9.03e+00 | 8.17e+00 | 4.86e-02 | 6.33e-02 | 3.49e-02 | 6.00e+00 | 2.00e+01 | 1.10e+01 | 2.81e+00 | 4.39e+00 | 3.58e+00 | 7.27e-04 | 2.42e-03 | 1.33e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 54838898 | 54920146 | ENSMUSG00000022425 | 0.4043 | - | Enpp2 | protein_coding | 6.06e-12 | 3.20e-09 | 3.35e-02 | -4.89785 | 4.95e+02 | 3.92e+02 | 5.41e+02 | 8.95e+00 | 8.62e+00 | 9.08e+00 | 2.87e-01 | 2.28e-01 | 3.14e-01 | 1.10e+01 | 2.10e+01 | 1.30e+01 | 3.58e+00 | 4.46e+00 | 3.81e+00 | 6.39e-03 | 1.22e-02 | 7.55e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 110279068 | 110281097 | ENSMUSG00000075707 | 0.5783 | + | Dio3 | protein_coding | 6.16e-12 | 3.20e-09 | 4.06e-02 | -4.62310 | 1.89e+03 | 1.20e+03 | 7.00e+02 | 1.09e+01 | 1.02e+01 | 9.45e+00 | 9.69e-01 | 6.16e-01 | 3.59e-01 | 6.20e+01 | 7.20e+01 | 1.70e+01 | 5.98e+00 | 6.19e+00 | 4.17e+00 | 3.18e-02 | 3.69e-02 | 8.72e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 72211752 | 72409054 | ENSMUSG00000021087 | 0.4375 | - | Rtn1 | protein_coding | 7.36e-12 | 3.73e-09 | 5.05e+01 | 5.65691 | 4.00e+00 | 0.00e+00 | 4.00e+00 | 2.32e+00 | 0.00e+00 | 2.32e+00 | 1.22e-03 | 0.00e+00 | 1.22e-03 | 1.17e+02 | 1.34e+02 | 3.01e+02 | 6.88e+00 | 7.08e+00 | 8.24e+00 | 3.56e-02 | 4.07e-02 | 9.15e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 144729677 | 144760977 | ENSMUSG00000056025 | 0.4089 | - | Clca3a1 | protein_coding | 8.91e-12 | 4.30e-09 | 4.68e+01 | 5.54800 | 4.00e+00 | 3.00e+00 | 4.00e+00 | 2.32e+00 | 2.00e+00 | 2.32e+00 | 5.52e-04 | 4.14e-04 | 5.52e-04 | 1.95e+02 | 3.17e+02 | 1.40e+02 | 7.61e+00 | 8.31e+00 | 7.14e+00 | 2.69e-02 | 4.37e-02 | 1.93e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 93235841 | 93301065 | ENSMUSG00000047793 | 0.4874 | + | Sned1 | protein_coding | 8.94e-12 | 4.30e-09 | 4.00e-02 | -4.64386 | 2.37e+02 | 9.30e+01 | 3.92e+02 | 7.89e+00 | 6.55e+00 | 8.62e+00 | 2.42e-02 | 9.49e-03 | 4.00e-02 | 1.00e+01 | 1.30e+01 | 3.00e+00 | 3.46e+00 | 3.81e+00 | 2.00e+00 | 1.02e-03 | 1.33e-03 | 3.06e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 54954843 | 55060871 | ENSMUSG00000031517 | 0.3518 | + | Gpm6a | protein_coding | 1.05e-11 | 4.81e-09 | 6.60e+01 | 6.04439 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 1.10e+01 | 6.70e+01 | 1.17e+02 | 3.58e+00 | 6.09e+00 | 6.88e+00 | 3.44e-03 | 2.10e-02 | 3.66e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 71957921 | 71963723 | ENSMUSG00000060969 | 0.5346 | - | Irx1 | protein_coding | 1.05e-11 | 4.81e-09 | 2.76e-02 | -5.17659 | 1.39e+02 | 1.27e+02 | 1.65e+02 | 7.13e+00 | 7.00e+00 | 7.38e+00 | 7.13e-02 | 6.52e-02 | 8.47e-02 | 2.00e+00 | 6.00e+00 | 1.00e+00 | 1.58e+00 | 2.81e+00 | 1.00e+00 | 1.03e-03 | 3.08e-03 | 5.13e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36221468 | 36257444 | ENSMUSG00000095620 | 0.3992 | + | 2010005H15Rik | protein_coding | 1.38e-11 | 6.20e-09 | 1.86e-02 | -5.74915 | 2.40e+02 | 7.60e+01 | 4.34e+02 | 7.91e+00 | 6.27e+00 | 8.76e+00 | 1.81e-01 | 5.73e-02 | 3.27e-01 | 4.00e+00 | 6.00e+00 | 1.00e+00 | 2.32e+00 | 2.81e+00 | 1.00e+00 | 3.02e-03 | 4.52e-03 | 7.54e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 40423815 | 40510268 | ENSMUSG00000039470 | 0.3927 | + | Zdhhc2 | protein_coding | 1.43e-11 | 6.25e-09 | 2.36e+01 | 4.56017 | 5.20e+01 | 8.00e+01 | 6.80e+01 | 5.73e+00 | 6.34e+00 | 6.11e+00 | 6.29e-03 | 9.68e-03 | 8.23e-03 | 1.05e+03 | 8.92e+02 | 2.84e+03 | 1.00e+01 | 9.80e+00 | 1.15e+01 | 1.27e-01 | 1.08e-01 | 3.44e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 180934772 | 180954699 | ENSMUSG00000027574 | 0.4915 | - | Nkain4 | protein_coding | 4.49e-11 | 1.92e-08 | 2.35e+01 | 4.55678 | 1.10e+01 | 3.90e+01 | 3.00e+00 | 3.58e+00 | 5.32e+00 | 2.00e+00 | 1.69e-03 | 5.98e-03 | 4.60e-04 | 4.26e+02 | 5.15e+02 | 3.74e+02 | 8.74e+00 | 9.01e+00 | 8.55e+00 | 6.54e-02 | 7.90e-02 | 5.74e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 30336441 | 30382867 | ENSMUSG00000049115 | 0.4305 | + | Agtr1a | protein_coding | 6.89e-11 | 2.88e-08 | 2.96e-02 | -5.07635 | 1.06e+02 | 4.80e+01 | 6.19e+02 | 6.74e+00 | 5.61e+00 | 9.28e+00 | 3.17e-02 | 1.44e-02 | 1.85e-01 | 5.00e+00 | 1.40e+01 | 1.00e+00 | 2.58e+00 | 3.91e+00 | 1.00e+00 | 1.50e-03 | 4.19e-03 | 2.99e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74691924 | 74695105 | ENSMUSG00000050368 | 0.4846 | + | Hoxd10 | protein_coding | 7.26e-11 | 2.95e-08 | 1.61e-02 | -5.95420 | 7.20e+01 | 8.30e+01 | 9.00e+01 | 6.19e+00 | 6.39e+00 | 6.51e+00 | 3.62e-02 | 4.17e-02 | 4.52e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 5.02e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 95637601 | 95698096 | ENSMUSG00000015354 | 0.4438 | + | Pcolce2 | protein_coding | 7.35e-11 | 2.95e-08 | 2.43e+01 | 4.60256 | 5.60e+01 | 2.20e+01 | 6.50e+01 | 5.83e+00 | 4.52e+00 | 6.04e+00 | 1.02e-02 | 3.99e-03 | 1.18e-02 | 2.68e+03 | 4.33e+02 | 4.26e+02 | 1.14e+01 | 8.76e+00 | 8.74e+00 | 4.87e-01 | 7.86e-02 | 7.73e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 75044018 | 75048830 | ENSMUSG00000079018 | 0.4820 | - | Ly6c1 | protein_coding | 7.80e-11 | 3.07e-08 | 4.11e-02 | -4.60416 | 2.64e+02 | 2.55e+02 | 1.59e+02 | 8.05e+00 | 8.00e+00 | 7.32e+00 | 7.34e-02 | 7.09e-02 | 4.42e-02 | 2.00e+00 | 1.30e+01 | 1.00e+01 | 1.58e+00 | 3.81e+00 | 3.46e+00 | 5.56e-04 | 3.62e-03 | 2.78e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 43506966 | 43513729 | ENSMUSG00000028463 | 0.5099 | + | Car9 | protein_coding | 8.86e-11 | 3.41e-08 | 4.09e-02 | -4.61343 | 2.11e+02 | 1.26e+02 | 2.23e+02 | 7.73e+00 | 6.99e+00 | 7.81e+00 | 4.58e-02 | 2.73e-02 | 4.84e-02 | 1.70e+01 | 2.00e+00 | 1.00e+00 | 4.17e+00 | 1.58e+00 | 1.00e+00 | 3.69e-03 | 4.34e-04 | 2.17e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 142575529 | 142578143 | ENSMUSG00000000031 | 0.5583 | - | H19 | lincRNA | 9.82e-11 | 3.71e-08 | 5.62e-02 | -4.15287 | 7.42e+02 | 2.95e+02 | 8.10e+02 | 9.54e+00 | 8.21e+00 | 9.66e+00 | 2.63e-01 | 1.04e-01 | 2.87e-01 | 1.70e+01 | 7.70e+01 | 7.00e+00 | 4.17e+00 | 6.29e+00 | 3.00e+00 | 6.02e-03 | 2.73e-02 | 2.48e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 33684466 | 33771576 | ENSMUSG00000075254 | 0.4667 | + | Heg1 | protein_coding | 1.05e-10 | 3.87e-08 | 2.44e+01 | 4.61028 | 1.65e+02 | 1.32e+02 | 9.30e+01 | 7.38e+00 | 7.06e+00 | 6.55e+00 | 1.66e-02 | 1.33e-02 | 9.36e-03 | 2.72e+03 | 4.58e+03 | 2.30e+03 | 1.14e+01 | 1.22e+01 | 1.12e+01 | 2.74e-01 | 4.61e-01 | 2.31e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 80411970 | 80447625 | ENSMUSG00000027004 | 0.4146 | - | Frzb | protein_coding | 1.11e-10 | 4.02e-08 | 2.58e+01 | 4.69071 | 1.98e+02 | 1.29e+02 | 4.20e+01 | 7.64e+00 | 7.02e+00 | 5.43e+00 | 7.48e-02 | 4.88e-02 | 1.59e-02 | 1.70e+03 | 4.26e+03 | 3.65e+03 | 1.07e+01 | 1.21e+01 | 1.18e+01 | 6.41e-01 | 1.61e+00 | 1.38e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 9844372 | 9862345 | ENSMUSG00000051279 | 0.4789 | + | Gdf6 | protein_coding | 1.63e-10 | 5.82e-08 | 2.25e+01 | 4.48971 | 5.80e+01 | 3.90e+01 | 3.50e+01 | 5.88e+00 | 5.32e+00 | 5.17e+00 | 1.75e-02 | 1.18e-02 | 1.06e-02 | 1.97e+03 | 6.15e+02 | 4.41e+02 | 1.09e+01 | 9.27e+00 | 8.79e+00 | 5.95e-01 | 1.86e-01 | 1.33e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 142650766 | 142666816 | ENSMUSG00000048583 | 0.5479 | - | Igf2 | protein_coding | 1.68e-10 | 5.82e-08 | 3.70e-02 | -4.75489 | 1.42e+02 | 5.40e+01 | 7.10e+01 | 7.16e+00 | 5.78e+00 | 6.17e+00 | 2.02e-02 | 7.67e-03 | 1.01e-02 | 2.00e+00 | 0.00e+00 | 5.00e+00 | 1.58e+00 | 0.00e+00 | 2.58e+00 | 2.84e-04 | 0.00e+00 | 7.10e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 151796502 | 151837630 | ENSMUSG00000028036 | 0.4114 | - | Ptgfr | protein_coding | 1.69e-10 | 5.82e-08 | 2.33e-02 | -5.42626 | 9.70e+01 | 8.30e+01 | 7.50e+01 | 6.61e+00 | 6.39e+00 | 6.25e+00 | 1.50e-02 | 1.28e-02 | 1.16e-02 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 1.00e+00 | 1.58e+00 | 0.00e+00 | 1.55e-04 | 3.09e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 65265180 | 65280605 | ENSMUSG00000042254 | 0.4935 | + | Cilp | protein_coding | 1.76e-10 | 5.96e-08 | 2.20e-02 | -5.50462 | 7.00e+01 | 1.00e+02 | 5.40e+01 | 6.15e+00 | 6.66e+00 | 5.78e+00 | 6.30e-03 | 9.01e-03 | 4.86e-03 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 1.80e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 38773184 | 38800203 | ENSMUSG00000049436 | 0.4395 | - | Upk1b | protein_coding | 3.05e-10 | 1.01e-07 | 6.20e+01 | 5.95420 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 2.80e+01 | 1.90e+01 | 1.36e+02 | 4.86e+00 | 4.32e+00 | 7.10e+00 | 1.29e-02 | 8.78e-03 | 6.28e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 92321347 | 92328079 | ENSMUSG00000029417 | 0.4151 | - | Cxcl9 | protein_coding | 3.46e-10 | 1.13e-07 | 2.16e-02 | -5.53605 | 1.22e+02 | 4.90e+01 | 5.80e+01 | 6.94e+00 | 5.64e+00 | 5.88e+00 | 2.46e-02 | 9.88e-03 | 1.17e-02 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 4.03e-04 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 112116017 | 112159057 | ENSMUSG00000030772 | 0.4891 | - | Dkk3 | protein_coding | 5.04e-10 | 1.62e-07 | 5.28e-02 | -4.24220 | 4.94e+02 | 8.32e+02 | 4.31e+02 | 8.95e+00 | 9.70e+00 | 8.75e+00 | 1.43e-01 | 2.41e-01 | 1.25e-01 | 1.70e+01 | 5.30e+01 | 2.00e+01 | 4.17e+00 | 5.75e+00 | 4.39e+00 | 4.93e-03 | 1.54e-02 | 5.80e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 32965209 | 32979067 | ENSMUSG00000042842 | 0.4316 | + | Serpinb6b | protein_coding | 5.25e-10 | 1.66e-07 | 2.36e+01 | 4.56377 | 1.30e+01 | 8.00e+00 | 1.60e+01 | 3.81e+00 | 3.17e+00 | 4.09e+00 | 3.74e-03 | 2.30e-03 | 4.60e-03 | 1.32e+02 | 4.32e+02 | 3.79e+02 | 7.06e+00 | 8.76e+00 | 8.57e+00 | 3.80e-02 | 1.24e-01 | 1.09e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 115450311 | 115587780 | ENSMUSG00000020140 | 0.4222 | - | Lgr5 | protein_coding | 7.08e-10 | 2.20e-07 | 2.27e-02 | -5.45943 | 3.70e+01 | 1.29e+02 | 5.10e+01 | 5.25e+00 | 7.02e+00 | 5.70e+00 | 4.01e-03 | 1.40e-02 | 5.53e-03 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.08e-04 | 0.00e+00 | 1.08e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74679557 | 74687016 | ENSMUSG00000042499 | 0.5307 | + | Hoxd11 | protein_coding | 7.40e-10 | 2.26e-07 | 1.72e-02 | -5.85798 | 9.40e+01 | 1.21e+02 | 7.20e+01 | 6.57e+00 | 6.93e+00 | 6.19e+00 | 3.70e-02 | 4.77e-02 | 2.84e-02 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 7.88e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 127514939 | 127517152 | ENSMUSG00000040280 | 0.5664 | + | Ndufa4l2 | protein_coding | 9.65e-10 | 2.90e-07 | 5.47e-02 | -4.19236 | 3.47e+02 | 2.26e+02 | 1.37e+02 | 8.44e+00 | 7.83e+00 | 7.11e+00 | 1.82e-01 | 1.19e-01 | 7.18e-02 | 1.40e+01 | 2.00e+01 | 2.00e+00 | 3.91e+00 | 4.39e+00 | 1.58e+00 | 7.34e-03 | 1.05e-02 | 1.05e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 78920787 | 78960254 | ENSMUSG00000020826 | 0.5008 | + | Nos2 | protein_coding | 1.11e-09 | 3.29e-07 | 6.16e-02 | -4.02185 | 6.68e+02 | 4.77e+02 | 2.49e+02 | 9.39e+00 | 8.90e+00 | 7.97e+00 | 2.22e-01 | 1.58e-01 | 8.27e-02 | 2.10e+01 | 5.40e+01 | 8.00e+00 | 4.46e+00 | 5.78e+00 | 3.17e+00 | 6.98e-03 | 1.79e-02 | 2.66e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 174833785 | 174921819 | ENSMUSG00000050069 | 0.4091 | - | Grem2 | protein_coding | 1.21e-09 | 3.53e-07 | 4.14e-02 | -4.59418 | 1.41e+02 | 9.00e+01 | 8.00e+01 | 7.15e+00 | 6.51e+00 | 6.34e+00 | 3.32e-02 | 2.12e-02 | 1.89e-02 | 8.00e+00 | 1.00e+00 | 1.00e+00 | 3.17e+00 | 1.00e+00 | 1.00e+00 | 1.89e-03 | 2.36e-04 | 2.36e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 165595032 | 165771727 | ENSMUSG00000017897 | 0.4927 | + | Eya2 | protein_coding | 1.32e-09 | 3.79e-07 | 5.20e-02 | -4.26440 | 2.71e+02 | 4.24e+02 | 3.59e+02 | 8.09e+00 | 8.73e+00 | 8.49e+00 | 4.81e-02 | 7.53e-02 | 6.38e-02 | 8.00e+00 | 3.30e+01 | 1.10e+01 | 3.17e+00 | 5.09e+00 | 3.58e+00 | 1.42e-03 | 5.86e-03 | 1.95e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 10208272 | 10240748 | ENSMUSG00000036098 | 0.5446 | - | Myrf | protein_coding | 1.58e-09 | 4.45e-07 | 2.03e+01 | 4.34577 | 2.80e+01 | 1.00e+01 | 1.30e+01 | 4.86e+00 | 3.46e+00 | 3.81e+00 | 6.06e-03 | 2.16e-03 | 2.81e-03 | 2.78e+02 | 3.21e+02 | 4.96e+02 | 8.12e+00 | 8.33e+00 | 8.96e+00 | 6.02e-02 | 6.95e-02 | 1.07e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 49544443 | 49567565 | ENSMUSG00000021388 | 0.3693 | + | Aspn | protein_coding | 1.60e-09 | 4.45e-07 | 1.66e-02 | -5.91488 | 3.10e+01 | 1.02e+02 | 4.50e+01 | 5.00e+00 | 6.69e+00 | 5.52e+00 | 1.42e-02 | 4.66e-02 | 2.06e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 160085029 | 160153580 | ENSMUSG00000026725 | 0.4388 | - | Tnn | protein_coding | 2.15e-09 | 5.92e-07 | 3.52e-02 | -4.82655 | 7.60e+01 | 2.50e+01 | 1.23e+02 | 6.27e+00 | 4.70e+00 | 6.95e+00 | 3.37e-02 | 1.11e-02 | 5.45e-02 | 3.00e+00 | 2.00e+00 | 0.00e+00 | 2.00e+00 | 1.58e+00 | 0.00e+00 | 1.33e-03 | 8.87e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 37804842 | 37808876 | ENSMUSG00000095180 | 0.4709 | + | Rhox5 | protein_coding | 2.48e-09 | 6.73e-07 | 4.23e+01 | 5.40210 | 2.00e+00 | 2.00e+00 | 0.00e+00 | 1.58e+00 | 1.58e+00 | 0.00e+00 | 1.46e-03 | 1.46e-03 | 0.00e+00 | 6.90e+01 | 7.90e+01 | 1.45e+02 | 6.13e+00 | 6.32e+00 | 7.19e+00 | 5.05e-02 | 5.78e-02 | 1.06e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 94772009 | 94782427 | ENSMUSG00000031778 | 0.5268 | + | Cx3cl1 | protein_coding | 2.69e-09 | 7.20e-07 | 6.93e-02 | -3.85014 | 1.85e+03 | 1.75e+03 | 4.34e+02 | 1.09e+01 | 1.08e+01 | 8.76e+00 | 1.90e-01 | 1.80e-01 | 4.46e-02 | 1.22e+02 | 9.90e+01 | 5.60e+01 | 6.94e+00 | 6.64e+00 | 5.83e+00 | 1.25e-02 | 1.02e-02 | 5.75e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 127525473 | 127534559 | ENSMUSG00000040258 | 0.5580 | - | Nxph4 | protein_coding | 2.85e-09 | 7.51e-07 | 1.97e-02 | -5.66676 | 8.90e+01 | 9.30e+01 | 6.90e+01 | 6.49e+00 | 6.55e+00 | 6.13e+00 | 4.72e-02 | 4.93e-02 | 3.66e-02 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 5.30e-04 | 5.30e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group2_vs_group6.Download the whole result list for group2_vs_group6.DEG table for the contrast group3_vs_group7The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group3_vs_group7. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group3_vs_group7 | log2_normalized_fold_change_group3_vs_group7 | natural_normalized_counts_7_TNF_DeltaARE_1_SFs | natural_normalized_counts_8_TNF_DeltaARE_2_SFs | natural_normalized_counts_9_TNF_DeltaARE_3_SFs | log2_normalized_counts_7_TNF_DeltaARE_1_SFs | log2_normalized_counts_8_TNF_DeltaARE_2_SFs | log2_normalized_counts_9_TNF_DeltaARE_3_SFs | rpgm_normalized_counts_7_TNF_DeltaARE_1_SFs | rpgm_normalized_counts_8_TNF_DeltaARE_2_SFs | rpgm_normalized_counts_9_TNF_DeltaARE_3_SFs | natural_normalized_counts_18_TNF_DeltaARE_1_VICs | natural_normalized_counts_19_TNF_DeltaARE_2_VICs | natural_normalized_counts_20_TNF_DeltaARE_3_VICs | log2_normalized_counts_18_TNF_DeltaARE_1_VICs | log2_normalized_counts_19_TNF_DeltaARE_2_VICs | log2_normalized_counts_20_TNF_DeltaARE_3_VICs | rpgm_normalized_counts_18_TNF_DeltaARE_1_VICs | rpgm_normalized_counts_19_TNF_DeltaARE_2_VICs | rpgm_normalized_counts_20_TNF_DeltaARE_3_VICs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr14 | 56117619 | 56120625 | ENSMUSG00000022156 | 0.4865 | - | Gzme | protein_coding | 1.14e-25 | 2.20e-21 | 2.89e-03 | -8.433933 | 9.33e+02 | 9.83e+02 | 1.56e+02 | 9.87e+00 | 9.94e+00 | 7.29e+00 | 6.86e-01 | 7.22e-01 | 1.15e-01 | 2.00e+00 | 1.00e+00 | 0.00e+00 | 1.58e+00 | 1.00e+00 | 0.00e+00 | 1.47e-03 | 7.35e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 92751590 | 92794818 | ENSMUSG00000021702 | 0.4601 | - | Thbs4 | protein_coding | 1.25e-23 | 1.20e-19 | 3.92e-03 | -7.994651 | 1.36e+03 | 2.22e+03 | 1.26e+03 | 1.04e+01 | 1.11e+01 | 1.03e+01 | 5.10e-01 | 8.33e-01 | 4.72e-01 | 1.30e+01 | 2.00e+00 | 1.00e+00 | 3.81e+00 | 1.58e+00 | 1.00e+00 | 4.87e-03 | 7.49e-04 | 3.75e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 24718138 | 24774303 | ENSMUSG00000031965 | 0.4010 | - | Tbx20 | protein_coding | 1.75e-22 | 1.12e-18 | 2.77e+02 | 8.115130 | 1.00e+00 | 7.00e+00 | 4.00e+00 | 1.00e+00 | 3.00e+00 | 2.32e+00 | 7.83e-05 | 5.48e-04 | 3.13e-04 | 1.44e+03 | 1.26e+03 | 1.46e+03 | 1.05e+01 | 1.03e+01 | 1.05e+01 | 1.13e-01 | 9.84e-02 | 1.14e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 127514939 | 127517152 | ENSMUSG00000040280 | 0.5664 | + | Ndufa4l2 | protein_coding | 1.40e-20 | 6.73e-17 | 4.21e-03 | -7.892796 | 3.44e+02 | 3.02e+02 | 6.40e+01 | 8.43e+00 | 8.24e+00 | 6.02e+00 | 1.80e-01 | 1.58e-01 | 3.36e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 110279068 | 110281097 | ENSMUSG00000075707 | 0.5783 | + | Dio3 | protein_coding | 1.41e-19 | 4.58e-16 | 9.15e-03 | -6.771684 | 7.96e+02 | 1.32e+03 | 1.60e+03 | 9.64e+00 | 1.04e+01 | 1.06e+01 | 4.08e-01 | 6.75e-01 | 8.21e-01 | 2.50e+01 | 5.00e+00 | 1.00e+00 | 4.70e+00 | 2.58e+00 | 1.00e+00 | 1.28e-02 | 2.56e-03 | 5.13e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 136038496 | 136046487 | ENSMUSG00000042985 | 0.5240 | + | Upk3b | protein_coding | 1.61e-19 | 4.58e-16 | 2.26e+02 | 7.816984 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 2.74e-04 | 0.00e+00 | 3.50e+02 | 2.75e+02 | 2.74e+02 | 8.46e+00 | 8.11e+00 | 8.10e+00 | 9.60e-02 | 7.54e-02 | 7.51e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 56477846 | 56690128 | ENSMUSG00000035258 | 0.3922 | + | Abi3bp | protein_coding | 1.67e-19 | 4.58e-16 | 7.80e-03 | -7.002413 | 5.40e+02 | 6.16e+02 | 6.36e+02 | 9.08e+00 | 9.27e+00 | 9.32e+00 | 2.31e-01 | 2.64e-01 | 2.73e-01 | 2.00e+00 | 7.00e+00 | 2.00e+00 | 1.58e+00 | 3.00e+00 | 1.58e+00 | 8.57e-04 | 3.00e-03 | 8.57e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 33027416 | 33041884 | ENSMUSG00000021403 | 0.4160 | + | Serpinb9b | protein_coding | 9.59e-19 | 2.31e-15 | 1.08e+02 | 6.759946 | 1.00e+01 | 9.00e+00 | 7.00e+00 | 3.46e+00 | 3.32e+00 | 3.00e+00 | 3.15e-03 | 2.83e-03 | 2.20e-03 | 1.02e+03 | 1.00e+03 | 1.12e+03 | 9.99e+00 | 9.97e+00 | 1.01e+01 | 3.21e-01 | 3.15e-01 | 3.52e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56231401 | 56234656 | ENSMUSG00000079186 | 0.4877 | - | Gzmc | protein_coding | 1.41e-18 | 2.72e-15 | 8.26e-03 | -6.918863 | 1.29e+02 | 3.08e+02 | 4.40e+01 | 7.02e+00 | 8.27e+00 | 5.49e+00 | 9.44e-02 | 2.25e-01 | 3.22e-02 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.32e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 7272514 | 7283331 | ENSMUSG00000050578 | 0.3772 | + | Mmp13 | protein_coding | 1.41e-18 | 2.72e-15 | 1.00e-02 | -6.638162 | 1.69e+03 | 1.06e+03 | 5.26e+02 | 1.07e+01 | 1.01e+01 | 9.04e+00 | 6.87e-01 | 4.31e-01 | 2.13e-01 | 1.10e+01 | 1.10e+01 | 8.00e+00 | 3.58e+00 | 3.58e+00 | 3.17e+00 | 4.46e-03 | 4.46e-03 | 3.24e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52244393 | 52249799 | ENSMUSG00000086427 | 0.5302 | + | Hoxa11os | processed_transcript | 1.72e-18 | 3.02e-15 | 5.75e-03 | -7.442943 | 2.03e+02 | 1.41e+02 | 1.75e+02 | 7.67e+00 | 7.15e+00 | 7.46e+00 | 8.00e-02 | 5.56e-02 | 6.90e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 71957921 | 71963723 | ENSMUSG00000060969 | 0.5346 | - | Irx1 | protein_coding | 8.14e-18 | 1.31e-14 | 9.70e-03 | -6.688250 | 2.63e+02 | 2.64e+02 | 2.95e+02 | 8.04e+00 | 8.05e+00 | 8.21e+00 | 1.35e-01 | 1.35e-01 | 1.51e-01 | 4.00e+00 | 1.00e+00 | 0.00e+00 | 2.32e+00 | 1.00e+00 | 0.00e+00 | 2.05e-03 | 5.13e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 62677826 | 62783982 | ENSMUSG00000032243 | 0.4998 | + | Itga11 | protein_coding | 1.41e-17 | 2.09e-14 | 9.93e-03 | -6.654311 | 4.47e+02 | 4.51e+02 | 2.07e+02 | 8.81e+00 | 8.82e+00 | 7.70e+00 | 1.18e-01 | 1.19e-01 | 5.46e-02 | 5.00e+00 | 2.00e+00 | 1.00e+00 | 2.58e+00 | 1.58e+00 | 1.00e+00 | 1.32e-03 | 5.28e-04 | 2.64e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 83587882 | 83593087 | ENSMUSG00000018927 | 0.4368 | - | Ccl6 | protein_coding | 1.58e-17 | 2.17e-14 | 1.38e-02 | -6.182914 | 1.92e+03 | 1.14e+03 | 5.90e+01 | 1.09e+01 | 1.02e+01 | 5.91e+00 | 5.57e-01 | 3.30e-01 | 1.71e-02 | 3.40e+01 | 5.00e+00 | 1.00e+00 | 5.13e+00 | 2.58e+00 | 1.00e+00 | 9.85e-03 | 1.45e-03 | 2.90e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56082166 | 56085216 | ENSMUSG00000022157 | 0.4569 | - | Mcpt8 | protein_coding | 1.69e-17 | 2.17e-14 | 1.08e-02 | -6.535275 | 6.48e+02 | 5.92e+02 | 2.41e+02 | 9.34e+00 | 9.21e+00 | 7.92e+00 | 4.85e-01 | 4.43e-01 | 1.80e-01 | 6.00e+00 | 6.00e+00 | 1.00e+00 | 2.81e+00 | 2.81e+00 | 1.00e+00 | 4.49e-03 | 4.49e-03 | 7.49e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 133850980 | 133865577 | ENSMUSG00000031250 | 0.4123 | + | Tnmd | protein_coding | 2.22e-17 | 2.67e-14 | 9.83e-03 | -6.668885 | 8.50e+01 | 1.69e+02 | 1.50e+02 | 6.43e+00 | 7.41e+00 | 7.24e+00 | 5.96e-02 | 1.19e-01 | 1.05e-01 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.01e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56365068 | 56388551 | ENSMUSG00000022229 | 0.4575 | + | Atp12a | protein_coding | 2.56e-17 | 2.89e-14 | 1.13e-02 | -6.471675 | 9.10e+01 | 2.21e+02 | 4.00e+01 | 6.52e+00 | 7.79e+00 | 5.36e+00 | 4.83e-02 | 1.17e-01 | 2.12e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 5.31e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 142650766 | 142666816 | ENSMUSG00000048583 | 0.5479 | - | Igf2 | protein_coding | 3.36e-17 | 3.60e-14 | 1.57e-02 | -5.994982 | 4.30e+01 | 4.68e+02 | 6.00e+01 | 5.46e+00 | 8.87e+00 | 5.93e+00 | 6.10e-03 | 6.64e-02 | 8.52e-03 | 5.00e+00 | 0.00e+00 | 1.00e+00 | 2.58e+00 | 0.00e+00 | 1.00e+00 | 7.10e-04 | 0.00e+00 | 1.42e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 54954843 | 55060871 | ENSMUSG00000031517 | 0.3518 | + | Gpm6a | protein_coding | 4.83e-17 | 4.89e-14 | 1.75e+02 | 7.449149 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.13e-04 | 0.00e+00 | 0.00e+00 | 1.01e+02 | 3.94e+02 | 2.01e+02 | 6.67e+00 | 8.63e+00 | 7.66e+00 | 3.16e-02 | 1.23e-01 | 6.29e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 54054928 | 54069014 | ENSMUSG00000020388 | 0.5357 | - | Pdlim4 | protein_coding | 8.01e-17 | 7.71e-14 | 1.58e-02 | -5.983808 | 5.91e+02 | 7.26e+02 | 8.95e+02 | 9.21e+00 | 9.51e+00 | 9.81e+00 | 1.12e-01 | 1.38e-01 | 1.70e-01 | 1.80e+01 | 1.00e+01 | 4.00e+00 | 4.25e+00 | 3.46e+00 | 2.32e+00 | 3.42e-03 | 1.90e-03 | 7.61e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 4133531 | 4138819 | ENSMUSG00000045573 | 0.4386 | - | Penk | protein_coding | 1.06e-16 | 9.67e-14 | 1.23e-02 | -6.348412 | 2.29e+03 | 1.35e+03 | 9.27e+02 | 1.12e+01 | 1.04e+01 | 9.86e+00 | 8.12e-01 | 4.78e-01 | 3.29e-01 | 1.10e+01 | 3.30e+01 | 9.00e+00 | 3.58e+00 | 5.09e+00 | 3.32e+00 | 3.91e-03 | 1.17e-02 | 3.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 43020811 | 43170818 | ENSMUSG00000051920 | 0.3829 | - | Rspo2 | protein_coding | 2.29e-16 | 2.00e-13 | 1.54e-02 | -6.018327 | 1.51e+02 | 2.45e+02 | 3.14e+02 | 7.25e+00 | 7.94e+00 | 8.30e+00 | 5.08e-02 | 8.25e-02 | 1.06e-01 | 5.00e+00 | 2.00e+00 | 1.00e+00 | 2.58e+00 | 1.58e+00 | 1.00e+00 | 1.68e-03 | 6.73e-04 | 3.37e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 93014205 | 93015687 | ENSMUSG00000027913 | 0.4990 | - | Crct1 | protein_coding | 6.60e-16 | 5.52e-13 | 6.30e+01 | 5.977280 | 2.40e+01 | 2.90e+01 | 5.00e+00 | 4.64e+00 | 4.91e+00 | 2.58e+00 | 1.53e-02 | 1.85e-02 | 3.19e-03 | 1.12e+03 | 8.27e+02 | 1.90e+03 | 1.01e+01 | 9.69e+00 | 1.09e+01 | 7.13e-01 | 5.27e-01 | 1.21e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 54838898 | 54920146 | ENSMUSG00000022425 | 0.4043 | - | Enpp2 | protein_coding | 7.35e-16 | 5.90e-13 | 1.70e-02 | -5.882074 | 1.02e+03 | 9.00e+02 | 6.09e+02 | 1.00e+01 | 9.82e+00 | 9.25e+00 | 5.95e-01 | 5.23e-01 | 3.54e-01 | 1.40e+01 | 1.10e+01 | 1.50e+01 | 3.91e+00 | 3.58e+00 | 4.00e+00 | 8.13e-03 | 6.39e-03 | 8.71e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 36111965 | 36119844 | ENSMUSG00000024803 | 0.4397 | - | Ankrd1 | protein_coding | 8.96e-16 | 6.90e-13 | 1.51e+02 | 7.243145 | 1.32e+02 | 1.32e+02 | 5.90e+01 | 7.06e+00 | 7.06e+00 | 5.91e+00 | 6.61e-02 | 6.61e-02 | 2.96e-02 | 7.94e+03 | 2.17e+04 | 1.97e+04 | 1.30e+01 | 1.44e+01 | 1.43e+01 | 3.98e+00 | 1.09e+01 | 9.87e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 69029289 | 69041401 | ENSMUSG00000014813 | 0.4445 | + | Stc1 | protein_coding | 1.11e-15 | 8.21e-13 | 1.81e-02 | -5.787309 | 2.08e+03 | 9.43e+02 | 6.22e+02 | 1.10e+01 | 9.88e+00 | 9.28e+00 | 5.00e-01 | 2.27e-01 | 1.50e-01 | 3.40e+01 | 1.40e+01 | 1.50e+01 | 5.13e+00 | 3.91e+00 | 4.00e+00 | 8.19e-03 | 3.37e-03 | 3.61e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 70373558 | 70382066 | ENSMUSG00000031849 | 0.5643 | + | Comp | protein_coding | 1.19e-15 | 8.51e-13 | 1.61e-02 | -5.956779 | 9.30e+01 | 7.90e+01 | 3.84e+02 | 6.55e+00 | 6.32e+00 | 8.59e+00 | 1.50e-02 | 1.28e-02 | 6.20e-02 | 2.00e+00 | 2.00e+00 | 2.00e+00 | 1.58e+00 | 1.58e+00 | 1.58e+00 | 3.23e-04 | 3.23e-04 | 3.23e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 22985854 | 23029101 | ENSMUSG00000060459 | 0.4230 | - | Kng2 | protein_coding | 1.26e-15 | 8.67e-13 | 1.03e-02 | -6.607330 | 1.78e+02 | 1.62e+02 | 4.70e+01 | 7.48e+00 | 7.35e+00 | 5.58e+00 | 1.87e-02 | 1.70e-02 | 4.94e-03 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.05e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52242106 | 52245810 | ENSMUSG00000038210 | 0.5282 | - | Hoxa11 | protein_coding | 2.17e-15 | 1.44e-12 | 8.71e-03 | -6.842979 | 1.78e+02 | 1.72e+02 | 2.21e+02 | 7.48e+00 | 7.43e+00 | 7.79e+00 | 7.10e-02 | 6.86e-02 | 8.81e-02 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 7.97e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 56288647 | 56296551 | ENSMUSG00000021508 | 0.5293 | - | Cxcl14 | protein_coding | 2.89e-15 | 1.86e-12 | 1.03e-02 | -6.604689 | 1.51e+04 | 1.27e+04 | 2.74e+03 | 1.39e+01 | 1.36e+01 | 1.14e+01 | 6.31e+00 | 5.28e+00 | 1.14e+00 | 5.80e+01 | 2.37e+02 | 1.60e+01 | 5.88e+00 | 7.89e+00 | 4.09e+00 | 2.42e-02 | 9.88e-02 | 6.67e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74668310 | 74671599 | ENSMUSG00000001819 | 0.4617 | + | Hoxd13 | protein_coding | 9.31e-15 | 5.78e-12 | 1.15e-02 | -6.438792 | 1.21e+02 | 9.60e+01 | 1.27e+02 | 6.93e+00 | 6.60e+00 | 7.00e+00 | 4.45e-02 | 3.53e-02 | 4.67e-02 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.68e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164940780 | 164955850 | ENSMUSG00000017737 | 0.5213 | + | Mmp9 | protein_coding | 1.18e-14 | 7.13e-12 | 2.17e-02 | -5.529431 | 1.48e+03 | 6.16e+02 | 1.22e+02 | 1.05e+01 | 9.27e+00 | 6.94e+00 | 3.14e-01 | 1.31e-01 | 2.59e-02 | 3.30e+01 | 5.00e+00 | 7.00e+00 | 5.09e+00 | 2.58e+00 | 3.00e+00 | 7.01e-03 | 1.06e-03 | 1.49e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52231197 | 52240854 | ENSMUSG00000000938 | 0.5046 | - | Hoxa10 | protein_coding | 1.91e-14 | 1.10e-11 | 1.08e-02 | -6.535275 | 1.41e+02 | 1.24e+02 | 1.03e+02 | 7.15e+00 | 6.97e+00 | 6.70e+00 | 5.50e-02 | 4.84e-02 | 4.02e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.90e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 103513341 | 103613346 | ENSMUSG00000022123 | 0.4082 | + | Scel | protein_coding | 1.95e-14 | 1.10e-11 | 6.46e+01 | 6.014274 | 3.00e+00 | 3.00e+00 | 2.00e+00 | 2.00e+00 | 2.00e+00 | 1.58e+00 | 1.36e-03 | 1.36e-03 | 9.09e-04 | 2.82e+02 | 2.53e+02 | 1.73e+02 | 8.14e+00 | 7.99e+00 | 7.44e+00 | 1.28e-01 | 1.15e-01 | 7.86e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 43506966 | 43513729 | ENSMUSG00000028463 | 0.5099 | + | Car9 | protein_coding | 3.26e-14 | 1.79e-11 | 1.54e-02 | -6.017922 | 1.67e+02 | 1.32e+02 | 2.20e+01 | 7.39e+00 | 7.06e+00 | 4.52e+00 | 3.62e-02 | 2.86e-02 | 4.77e-03 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 2.17e-04 | 2.17e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 92750148 | 92752338 | ENSMUSG00000027919 | 0.4350 | - | Lce1g | protein_coding | 4.19e-14 | 2.24e-11 | 1.23e+02 | 6.942515 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 5.93e-04 | 0.00e+00 | 0.00e+00 | 2.73e+02 | 9.70e+01 | 1.19e+02 | 8.10e+00 | 6.61e+00 | 6.91e+00 | 1.62e-01 | 5.75e-02 | 7.06e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 22817279 | 22820128 | ENSMUSG00000045680 | 0.4958 | - | Tcf21 | protein_coding | 5.49e-14 | 2.86e-11 | 1.16e+02 | 6.853829 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 2.00e+02 | 7.90e+01 | 6.50e+01 | 7.65e+00 | 6.32e+00 | 6.04e+00 | 1.17e-01 | 4.61e-02 | 3.80e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 97565501 | 97572703 | ENSMUSG00000036446 | 0.3719 | + | Lum | protein_coding | 7.64e-14 | 3.79e-11 | 2.08e-02 | -5.584963 | 5.80e+02 | 2.77e+02 | 1.48e+02 | 9.18e+00 | 8.12e+00 | 7.22e+00 | 3.04e-01 | 1.45e-01 | 7.76e-02 | 1.10e+01 | 5.00e+00 | 2.00e+00 | 3.58e+00 | 2.58e+00 | 1.58e+00 | 5.77e-03 | 2.62e-03 | 1.05e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 104435118 | 104441050 | ENSMUSG00000029304 | 0.3787 | + | Spp1 | protein_coding | 7.67e-14 | 3.79e-11 | 2.58e-02 | -5.278904 | 1.67e+03 | 1.20e+03 | 8.93e+02 | 1.07e+01 | 1.02e+01 | 9.80e+00 | 3.95e-01 | 2.83e-01 | 2.11e-01 | 3.30e+01 | 3.80e+01 | 2.30e+01 | 5.09e+00 | 5.29e+00 | 4.58e+00 | 7.80e-03 | 8.98e-03 | 5.43e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 71215789 | 71296243 | ENSMUSG00000013584 | 0.4211 | + | Aldh1a2 | protein_coding | 1.06e-13 | 5.09e-11 | 3.35e-02 | -4.899659 | 6.39e+02 | 1.62e+03 | 1.32e+03 | 9.32e+00 | 1.07e+01 | 1.04e+01 | 2.20e-01 | 5.57e-01 | 4.56e-01 | 9.80e+01 | 1.50e+01 | 4.00e+00 | 6.63e+00 | 4.00e+00 | 2.32e+00 | 3.38e-02 | 5.17e-03 | 1.38e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 143078473 | 143081713 | ENSMUSG00000027416 | 0.3891 | + | Otor | protein_coding | 2.02e-13 | 9.51e-11 | 1.79e-02 | -5.800900 | 3.10e+01 | 8.90e+01 | 1.00e+02 | 5.00e+00 | 6.49e+00 | 6.66e+00 | 1.73e-02 | 4.97e-02 | 5.59e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 5.59e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 20601961 | 20643462 | ENSMUSG00000053279 | 0.3766 | + | Aldh1a1 | protein_coding | 2.57e-13 | 1.17e-10 | 3.80e+01 | 5.246937 | 4.00e+01 | 3.20e+01 | 4.00e+01 | 5.36e+00 | 5.04e+00 | 5.36e+00 | 2.29e-02 | 1.83e-02 | 2.29e-02 | 2.11e+03 | 1.01e+03 | 1.25e+03 | 1.10e+01 | 9.98e+00 | 1.03e+01 | 1.21e+00 | 5.75e-01 | 7.13e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34856412 | 34882042 | ENSMUSG00000092511 | 0.4845 | - | Gm20547 | protein_coding | 2.62e-13 | 1.17e-10 | 2.28e-02 | -5.456016 | 5.66e+03 | 6.35e+03 | 3.18e+03 | 1.25e+01 | 1.26e+01 | 1.16e+01 | 4.46e+00 | 5.00e+00 | 2.51e+00 | 2.34e+02 | 8.50e+01 | 2.40e+01 | 7.88e+00 | 6.43e+00 | 4.64e+00 | 1.84e-01 | 6.70e-02 | 1.89e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 32965209 | 32979067 | ENSMUSG00000042842 | 0.4316 | + | Serpinb6b | protein_coding | 3.42e-13 | 1.50e-10 | 6.05e+01 | 5.917946 | 0.00e+00 | 4.00e+00 | 6.00e+00 | 0.00e+00 | 2.32e+00 | 2.81e+00 | 0.00e+00 | 1.15e-03 | 1.73e-03 | 4.77e+02 | 1.45e+02 | 1.61e+02 | 8.90e+00 | 7.19e+00 | 7.34e+00 | 1.37e-01 | 4.17e-02 | 4.63e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 63198922 | 63271692 | ENSMUSG00000021944 | 0.4731 | - | Gata4 | protein_coding | 4.29e-13 | 1.84e-10 | 1.13e+02 | 6.815917 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 7.00e+01 | 1.72e+02 | 9.30e+01 | 6.15e+00 | 7.43e+00 | 6.55e+00 | 1.76e-02 | 4.33e-02 | 2.34e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 38773184 | 38800203 | ENSMUSG00000049436 | 0.4395 | - | Upk1b | protein_coding | 1.27e-12 | 5.33e-10 | 1.11e+02 | 6.790077 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 1.05e+02 | 1.22e+02 | 1.02e+02 | 6.73e+00 | 6.94e+00 | 6.69e+00 | 4.85e-02 | 5.64e-02 | 4.71e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36221468 | 36257444 | ENSMUSG00000095620 | 0.3992 | + | 2010005H15Rik | protein_coding | 1.35e-12 | 5.55e-10 | 1.40e-02 | -6.163230 | 1.23e+02 | 8.80e+01 | 1.00e+00 | 6.95e+00 | 6.48e+00 | 1.00e+00 | 9.28e-02 | 6.64e-02 | 7.54e-04 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 40429570 | 40465415 | ENSMUSG00000026069 | 0.4155 | + | Il1rl1 | protein_coding | 1.66e-12 | 6.66e-10 | 3.44e-02 | -4.862439 | 9.29e+02 | 6.68e+02 | 6.69e+02 | 9.86e+00 | 9.39e+00 | 9.39e+00 | 1.10e-01 | 7.90e-02 | 7.92e-02 | 1.70e+01 | 7.00e+00 | 5.10e+01 | 4.17e+00 | 3.00e+00 | 5.70e+00 | 2.01e-03 | 8.28e-04 | 6.03e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 160085029 | 160153580 | ENSMUSG00000026725 | 0.4388 | - | Tnn | protein_coding | 2.42e-12 | 9.53e-10 | 1.95e-02 | -5.680485 | 9.90e+01 | 1.14e+02 | 1.43e+02 | 6.64e+00 | 6.85e+00 | 7.17e+00 | 4.39e-02 | 5.05e-02 | 6.34e-02 | 3.00e+00 | 0.00e+00 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 1.00e+00 | 1.33e-03 | 0.00e+00 | 4.43e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74679557 | 74687016 | ENSMUSG00000042499 | 0.5307 | + | Hoxd11 | protein_coding | 2.51e-12 | 9.65e-10 | 1.52e-02 | -6.038919 | 8.40e+01 | 1.11e+02 | 6.50e+01 | 6.41e+00 | 6.81e+00 | 6.04e+00 | 3.31e-02 | 4.37e-02 | 2.56e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 3.94e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 60174405 | 60177365 | ENSMUSG00000052957 | 0.5836 | - | Gas1 | protein_coding | 3.41e-12 | 1.29e-09 | 3.47e-02 | -4.849070 | 2.26e+02 | 2.59e+02 | 3.19e+02 | 7.83e+00 | 8.02e+00 | 8.32e+00 | 9.49e-02 | 1.09e-01 | 1.34e-01 | 1.10e+01 | 7.00e+00 | 7.00e+00 | 3.58e+00 | 3.00e+00 | 3.00e+00 | 4.62e-03 | 2.94e-03 | 2.94e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 59316735 | 59344394 | ENSMUSG00000036334 | 0.4060 | - | Igsf10 | protein_coding | 3.69e-12 | 1.37e-09 | 1.68e-02 | -5.897240 | 8.50e+01 | 9.20e+01 | 1.18e+02 | 6.43e+00 | 6.54e+00 | 6.89e+00 | 2.01e-02 | 2.17e-02 | 2.78e-02 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 2.36e-04 | 2.36e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 92483952 | 92485895 | ENSMUSG00000050359 | 0.4573 | - | Sprr1a | protein_coding | 4.56e-12 | 1.66e-09 | 7.12e+01 | 6.153130 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.92e-03 | 0.00e+00 | 0.00e+00 | 6.70e+01 | 1.52e+02 | 2.05e+02 | 6.09e+00 | 7.26e+00 | 7.69e+00 | 4.29e-02 | 9.74e-02 | 1.31e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 24336853 | 24351494 | ENSMUSG00000026981 | 0.4277 | + | Il1rn | protein_coding | 5.41e-12 | 1.93e-09 | 3.98e-02 | -4.650334 | 1.91e+03 | 1.08e+03 | 1.03e+03 | 1.09e+01 | 1.01e+01 | 1.00e+01 | 3.27e-01 | 1.85e-01 | 1.76e-01 | 1.48e+02 | 5.00e+00 | 4.00e+00 | 7.22e+00 | 2.58e+00 | 2.32e+00 | 2.54e-02 | 8.57e-04 | 6.86e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56129556 | 56132608 | ENSMUSG00000059256 | 0.4923 | - | Gzmd | protein_coding | 6.38e-12 | 2.21e-09 | 1.52e-02 | -6.044394 | 1.63e+02 | 8.70e+01 | 1.10e+01 | 7.36e+00 | 6.46e+00 | 3.58e+00 | 1.19e-01 | 6.34e-02 | 8.01e-03 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.28e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52214491 | 52221854 | ENSMUSG00000038236 | 0.5205 | - | Hoxa7 | protein_coding | 6.42e-12 | 2.21e-09 | 1.64e-02 | -5.934112 | 1.60e+02 | 1.47e+02 | 1.18e+02 | 7.33e+00 | 7.21e+00 | 6.89e+00 | 3.08e-02 | 2.83e-02 | 2.27e-02 | 2.00e+00 | 1.00e+00 | 1.00e+00 | 1.58e+00 | 1.00e+00 | 1.00e+00 | 3.85e-04 | 1.93e-04 | 1.93e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 142575529 | 142578143 | ENSMUSG00000000031 | 0.5583 | - | H19 | lincRNA | 7.88e-12 | 2.66e-09 | 4.11e-02 | -4.606024 | 2.84e+02 | 3.16e+02 | 2.25e+02 | 8.15e+00 | 8.31e+00 | 7.82e+00 | 1.01e-01 | 1.12e-01 | 7.97e-02 | 1.80e+01 | 7.00e+00 | 6.00e+00 | 4.25e+00 | 3.00e+00 | 2.81e+00 | 6.37e-03 | 2.48e-03 | 2.12e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 167191805 | 167240604 | ENSMUSG00000017969 | 0.5082 | - | Ptgis | protein_coding | 8.04e-12 | 2.67e-09 | 2.70e+01 | 4.754888 | 5.20e+01 | 5.10e+01 | 5.40e+01 | 5.73e+00 | 5.70e+00 | 5.78e+00 | 1.24e-02 | 1.22e-02 | 1.29e-02 | 1.53e+03 | 1.32e+03 | 1.48e+03 | 1.06e+01 | 1.04e+01 | 1.05e+01 | 3.64e-01 | 3.14e-01 | 3.52e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34862604 | 34898265 | ENSMUSG00000024371 | 0.4824 | - | C2 | protein_coding | 8.35e-12 | 2.72e-09 | 3.08e-02 | -5.021062 | 1.88e+02 | 2.88e+02 | 7.30e+01 | 7.56e+00 | 8.17e+00 | 6.21e+00 | 2.88e-02 | 4.41e-02 | 1.12e-02 | 8.00e+00 | 5.00e+00 | 1.00e+00 | 3.17e+00 | 2.58e+00 | 1.00e+00 | 1.23e-03 | 7.66e-04 | 1.53e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 30336441 | 30382867 | ENSMUSG00000049115 | 0.4305 | + | Agtr1a | protein_coding | 8.57e-12 | 2.75e-09 | 2.53e-02 | -5.307429 | 4.50e+01 | 6.20e+01 | 8.80e+01 | 5.52e+00 | 5.98e+00 | 6.48e+00 | 1.35e-02 | 1.86e-02 | 2.63e-02 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 5.98e-04 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 66175273 | 66442583 | ENSMUSG00000015222 | 0.3834 | + | Map2 | protein_coding | 1.20e-11 | 3.78e-09 | 4.02e+01 | 5.329636 | 1.00e+00 | 3.00e+00 | 7.00e+00 | 1.00e+00 | 2.00e+00 | 3.00e+00 | 5.00e-05 | 1.50e-04 | 3.50e-04 | 2.40e+02 | 1.44e+02 | 1.76e+02 | 7.91e+00 | 7.18e+00 | 7.47e+00 | 1.20e-02 | 7.20e-03 | 8.80e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 65265180 | 65280605 | ENSMUSG00000042254 | 0.4935 | + | Cilp | protein_coding | 1.66e-11 | 5.14e-09 | 2.69e-02 | -5.217231 | 5.10e+01 | 8.60e+01 | 4.60e+01 | 5.70e+00 | 6.44e+00 | 5.55e+00 | 4.59e-03 | 7.75e-03 | 4.14e-03 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 9.01e-05 | 9.01e-05 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 165595032 | 165771727 | ENSMUSG00000017897 | 0.4927 | + | Eya2 | protein_coding | 1.91e-11 | 5.85e-09 | 3.75e-02 | -4.737610 | 3.07e+02 | 2.36e+02 | 2.01e+02 | 8.27e+00 | 7.89e+00 | 7.66e+00 | 5.45e-02 | 4.19e-02 | 3.57e-02 | 5.00e+00 | 5.00e+00 | 1.50e+01 | 2.58e+00 | 2.58e+00 | 4.00e+00 | 8.88e-04 | 8.88e-04 | 2.66e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 48569696 | 48572789 | ENSMUSG00000009281 | 0.5055 | - | Rarres2 | protein_coding | 1.97e-11 | 5.93e-09 | 4.49e-02 | -4.477723 | 5.88e+02 | 5.46e+02 | 1.33e+02 | 9.20e+00 | 9.10e+00 | 7.07e+00 | 2.48e-01 | 2.30e-01 | 5.60e-02 | 3.60e+01 | 5.00e+00 | 1.30e+01 | 5.21e+00 | 2.58e+00 | 3.81e+00 | 1.52e-02 | 2.11e-03 | 5.48e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 42424727 | 42676977 | ENSMUSG00000022309 | 0.3748 | - | Angpt1 | protein_coding | 2.07e-11 | 6.13e-09 | 1.25e-02 | -6.321928 | 7.90e+01 | 8.00e+01 | 7.80e+01 | 6.32e+00 | 6.34e+00 | 6.30e+00 | 2.26e-02 | 2.29e-02 | 2.23e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164354070 | 164389095 | ENSMUSG00000017002 | 0.4508 | - | Slpi | protein_coding | 2.83e-11 | 8.25e-09 | 4.66e-02 | -4.423499 | 1.04e+03 | 5.20e+02 | 2.65e+02 | 1.00e+01 | 9.03e+00 | 8.06e+00 | 2.76e-01 | 1.39e-01 | 7.06e-02 | 7.20e+01 | 8.00e+00 | 2.00e+00 | 6.19e+00 | 3.17e+00 | 1.58e+00 | 1.92e-02 | 2.13e-03 | 5.33e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 40423815 | 40510268 | ENSMUSG00000039470 | 0.3927 | + | Zdhhc2 | protein_coding | 2.96e-11 | 8.52e-09 | 2.59e+01 | 4.695320 | 4.60e+01 | 4.50e+01 | 5.80e+01 | 5.55e+00 | 5.52e+00 | 5.88e+00 | 5.57e-03 | 5.45e-03 | 7.02e-03 | 2.50e+03 | 5.64e+02 | 8.67e+02 | 1.13e+01 | 9.14e+00 | 9.76e+00 | 3.03e-01 | 6.83e-02 | 1.05e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 94772009 | 94782427 | ENSMUSG00000031778 | 0.5268 | + | Cx3cl1 | protein_coding | 4.24e-11 | 1.20e-08 | 5.14e-02 | -4.282631 | 1.10e+03 | 1.04e+03 | 7.22e+02 | 1.01e+01 | 1.00e+01 | 9.50e+00 | 1.12e-01 | 1.07e-01 | 7.41e-02 | 9.60e+01 | 1.90e+01 | 2.90e+01 | 6.60e+00 | 4.32e+00 | 4.91e+00 | 9.86e-03 | 1.95e-03 | 2.98e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 87948666 | 87953376 | ENSMUSG00000004885 | 0.5245 | + | Crabp2 | protein_coding | 5.44e-11 | 1.52e-08 | 2.20e-02 | -5.506032 | 2.69e+02 | 1.18e+02 | 1.90e+01 | 8.08e+00 | 6.89e+00 | 4.32e+00 | 1.64e-01 | 7.17e-02 | 1.16e-02 | 3.00e+00 | 2.00e+00 | 1.00e+00 | 2.00e+00 | 1.58e+00 | 1.00e+00 | 1.82e-03 | 1.22e-03 | 6.08e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34856374 | 34862518 | ENSMUSG00000090231 | 0.5196 | - | Cfb | protein_coding | 5.61e-11 | 1.54e-08 | 2.28e-02 | -5.454163 | 1.49e+04 | 1.62e+04 | 8.48e+03 | 1.39e+01 | 1.40e+01 | 1.30e+01 | 2.17e+00 | 2.37e+00 | 1.24e+00 | 6.41e+02 | 1.98e+02 | 6.20e+01 | 9.33e+00 | 7.64e+00 | 5.98e+00 | 9.35e-02 | 2.89e-02 | 9.04e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 141010418 | 141015984 | ENSMUSG00000060572 | 0.5768 | + | Mfap2 | protein_coding | 6.39e-11 | 1.73e-08 | 3.34e-02 | -4.902878 | 1.03e+02 | 1.43e+02 | 1.10e+02 | 6.70e+00 | 7.17e+00 | 6.79e+00 | 3.54e-02 | 4.91e-02 | 3.78e-02 | 5.00e+00 | 4.00e+00 | 0.00e+00 | 2.58e+00 | 2.32e+00 | 0.00e+00 | 1.72e-03 | 1.37e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 137341067 | 137432185 | ENSMUSG00000054690 | 0.3836 | + | Emcn | protein_coding | 7.43e-11 | 1.99e-08 | 5.59e+01 | 5.804776 | 3.00e+00 | 4.00e+00 | 0.00e+00 | 2.00e+00 | 2.32e+00 | 0.00e+00 | 5.61e-04 | 7.47e-04 | 0.00e+00 | 5.50e+01 | 3.51e+02 | 1.50e+02 | 5.81e+00 | 8.46e+00 | 7.24e+00 | 1.03e-02 | 6.56e-02 | 2.80e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 148495183 | 148500460 | ENSMUSG00000028989 | 0.4970 | - | Angptl7 | protein_coding | 8.20e-11 | 2.16e-08 | 2.56e-02 | -5.285402 | 1.38e+02 | 8.90e+01 | 4.30e+01 | 7.12e+00 | 6.49e+00 | 5.46e+00 | 6.20e-02 | 4.00e-02 | 1.93e-02 | 2.00e+00 | 1.00e+00 | 1.00e+00 | 1.58e+00 | 1.00e+00 | 1.00e+00 | 8.98e-04 | 4.49e-04 | 4.49e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52223100 | 52231089 | ENSMUSG00000038227 | 0.5144 | - | Hoxa9 | protein_coding | 8.51e-11 | 2.21e-08 | 2.76e-02 | -5.177193 | 1.41e+02 | 1.48e+02 | 1.06e+02 | 7.15e+00 | 7.22e+00 | 6.74e+00 | 2.83e-02 | 2.97e-02 | 2.13e-02 | 5.00e+00 | 1.00e+00 | 2.00e+00 | 2.58e+00 | 1.00e+00 | 1.58e+00 | 1.00e-03 | 2.01e-04 | 4.02e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 14279506 | 14404790 | ENSMUSG00000023886 | 0.4618 | + | Smoc2 | protein_coding | 1.10e-10 | 2.83e-08 | 5.50e-02 | -4.184482 | 6.48e+02 | 7.02e+02 | 9.38e+02 | 9.34e+00 | 9.46e+00 | 9.87e+00 | 2.56e-01 | 2.77e-01 | 3.70e-01 | 8.40e+01 | 2.40e+01 | 1.50e+01 | 6.41e+00 | 4.64e+00 | 4.00e+00 | 3.32e-02 | 9.48e-03 | 5.92e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 10208272 | 10240748 | ENSMUSG00000036098 | 0.5446 | - | Myrf | protein_coding | 1.29e-10 | 3.25e-08 | 2.70e+01 | 4.752907 | 7.00e+00 | 1.20e+01 | 5.00e+00 | 3.00e+00 | 3.70e+00 | 2.58e+00 | 1.51e-03 | 2.60e-03 | 1.08e-03 | 3.07e+02 | 2.01e+02 | 2.17e+02 | 8.27e+00 | 7.66e+00 | 7.77e+00 | 6.64e-02 | 4.35e-02 | 4.70e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 127887589 | 127953977 | ENSMUSG00000030351 | 0.4980 | + | Tspan11 | protein_coding | 1.30e-10 | 3.25e-08 | 1.68e-02 | -5.896549 | 1.97e+02 | 1.22e+02 | 9.50e+01 | 7.63e+00 | 6.94e+00 | 6.58e+00 | 2.97e-02 | 1.84e-02 | 1.43e-02 | 0.00e+00 | 2.00e+00 | 2.00e+00 | 0.00e+00 | 1.58e+00 | 1.58e+00 | 0.00e+00 | 3.02e-04 | 3.02e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 107106570 | 107289629 | ENSMUSG00000029287 | 0.4522 | - | Tgfbr3 | protein_coding | 1.42e-10 | 3.48e-08 | 5.72e-02 | -4.127221 | 6.55e+02 | 7.67e+02 | 6.72e+02 | 9.36e+00 | 9.58e+00 | 9.39e+00 | 9.29e-02 | 1.09e-01 | 9.53e-02 | 7.90e+01 | 2.10e+01 | 1.70e+01 | 6.32e+00 | 4.46e+00 | 4.17e+00 | 1.12e-02 | 2.98e-03 | 2.41e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 151796502 | 151837630 | ENSMUSG00000028036 | 0.4114 | - | Ptgfr | protein_coding | 1.43e-10 | 3.48e-08 | 2.23e-02 | -5.487266 | 1.47e+02 | 1.03e+02 | 6.10e+01 | 7.21e+00 | 6.70e+00 | 5.95e+00 | 2.27e-02 | 1.59e-02 | 9.43e-03 | 1.00e+00 | 3.00e+00 | 0.00e+00 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 1.55e-04 | 4.64e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 44302687 | 44306902 | ENSMUSG00000004473 | 0.5384 | - | Clec11a | protein_coding | 1.83e-10 | 4.41e-08 | 5.01e-02 | -4.319439 | 1.73e+02 | 2.06e+02 | 1.97e+02 | 7.44e+00 | 7.69e+00 | 7.63e+00 | 5.57e-02 | 6.63e-02 | 6.34e-02 | 2.10e+01 | 2.00e+00 | 3.00e+00 | 4.46e+00 | 1.58e+00 | 2.00e+00 | 6.76e-03 | 6.44e-04 | 9.65e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 125676995 | 125873862 | ENSMUSG00000026343 | 0.4423 | + | Gpr39 | protein_coding | 2.13e-10 | 5.06e-08 | 1.90e+01 | 4.248901 | 2.50e+01 | 1.60e+01 | 3.40e+01 | 4.70e+00 | 4.09e+00 | 5.13e+00 | 1.12e-02 | 7.17e-03 | 1.52e-02 | 3.52e+02 | 5.78e+02 | 5.50e+02 | 8.46e+00 | 9.18e+00 | 9.11e+00 | 1.58e-01 | 2.59e-01 | 2.46e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 68356781 | 68735146 | ENSMUSG00000036356 | 0.4094 | - | Csgalnact1 | protein_coding | 2.29e-10 | 5.38e-08 | 5.45e-02 | -4.198049 | 1.05e+03 | 8.82e+02 | 3.98e+02 | 1.00e+01 | 9.79e+00 | 8.64e+00 | 1.27e-01 | 1.07e-01 | 4.82e-02 | 5.60e+01 | 3.40e+01 | 3.40e+01 | 5.83e+00 | 5.13e+00 | 5.13e+00 | 6.78e-03 | 4.12e-03 | 4.12e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 116301374 | 116389538 | ENSMUSG00000020154 | 0.4348 | + | Ptprb | protein_coding | 3.00e-10 | 6.97e-08 | 7.05e+01 | 6.139551 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.45e-04 | 0.00e+00 | 0.00e+00 | 5.80e+01 | 1.16e+02 | 1.05e+02 | 5.88e+00 | 6.87e+00 | 6.73e+00 | 8.39e-03 | 1.68e-02 | 1.52e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 174833785 | 174921819 | ENSMUSG00000050069 | 0.4091 | - | Grem2 | protein_coding | 3.60e-10 | 8.24e-08 | 3.15e-02 | -4.988685 | 2.32e+02 | 1.96e+02 | 2.04e+02 | 7.86e+00 | 7.62e+00 | 7.68e+00 | 5.47e-02 | 4.62e-02 | 4.81e-02 | 5.00e+00 | 1.00e+01 | 2.00e+00 | 2.58e+00 | 3.46e+00 | 1.58e+00 | 1.18e-03 | 2.36e-03 | 4.71e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 10153571 | 10256529 | ENSMUSG00000025780 | 0.4401 | + | Itih5 | protein_coding | 3.70e-10 | 8.37e-08 | 4.25e-02 | -4.557145 | 2.42e+02 | 2.19e+02 | 1.01e+02 | 7.92e+00 | 7.78e+00 | 6.67e+00 | 3.90e-02 | 3.53e-02 | 1.63e-02 | 1.50e+01 | 2.00e+00 | 4.00e+00 | 4.00e+00 | 1.58e+00 | 2.32e+00 | 2.42e-03 | 3.23e-04 | 6.45e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 37804842 | 37808876 | ENSMUSG00000095180 | 0.4709 | + | Rhox5 | protein_coding | 3.80e-10 | 8.51e-08 | 5.85e+01 | 5.870365 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.32e-04 | 0.00e+00 | 9.90e+01 | 6.20e+01 | 7.00e+01 | 6.64e+00 | 5.98e+00 | 6.15e+00 | 7.25e-02 | 4.54e-02 | 5.12e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36184212 | 36188111 | ENSMUSG00000079597 | 0.3918 | + | Gm5483 | protein_coding | 4.27e-10 | 9.34e-08 | 2.29e-02 | -5.448461 | 6.90e+01 | 5.80e+01 | 1.00e+00 | 6.13e+00 | 5.88e+00 | 1.00e+00 | 5.20e-02 | 4.37e-02 | 7.54e-04 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 123411424 | 123422015 | ENSMUSG00000062380 | 0.5051 | + | Tubb3 | protein_coding | 4.27e-10 | 9.34e-08 | 1.97e+01 | 4.298076 | 4.00e+01 | 8.80e+01 | 1.16e+02 | 5.36e+00 | 6.48e+00 | 6.87e+00 | 1.24e-02 | 2.72e-02 | 3.59e-02 | 9.42e+02 | 1.80e+03 | 2.11e+03 | 9.88e+00 | 1.08e+01 | 1.10e+01 | 2.91e-01 | 5.58e-01 | 6.53e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 117966079 | 117970047 | ENSMUSG00000053113 | 0.6102 | - | Socs3 | protein_coding | 4.42e-10 | 9.56e-08 | 4.72e-02 | -4.403722 | 2.08e+02 | 2.02e+02 | 9.50e+01 | 7.71e+00 | 7.67e+00 | 6.58e+00 | 5.15e-02 | 5.00e-02 | 2.35e-02 | 1.40e+01 | 5.00e+00 | 2.00e+00 | 3.91e+00 | 2.58e+00 | 1.58e+00 | 3.46e-03 | 1.24e-03 | 4.95e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74691924 | 74695105 | ENSMUSG00000050368 | 0.4846 | + | Hoxd10 | protein_coding | 4.85e-10 | 1.04e-07 | 2.17e-02 | -5.523562 | 1.30e+02 | 9.10e+01 | 9.80e+01 | 7.03e+00 | 6.52e+00 | 6.63e+00 | 6.53e-02 | 4.57e-02 | 4.92e-02 | 0.00e+00 | 0.00e+00 | 4.00e+00 | 0.00e+00 | 0.00e+00 | 2.32e+00 | 0.00e+00 | 0.00e+00 | 2.01e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 59347407 | 59365470 | ENSMUSG00000068245 | 0.4345 | - | Phf11d | protein_coding | 5.39e-10 | 1.14e-07 | 7.56e-02 | -3.725156 | 1.66e+02 | 1.44e+03 | 2.13e+02 | 7.38e+00 | 1.05e+01 | 7.74e+00 | 5.51e-02 | 4.79e-01 | 7.06e-02 | 6.80e+01 | 5.40e+01 | 1.30e+01 | 6.11e+00 | 5.78e+00 | 3.81e+00 | 2.26e-02 | 1.79e-02 | 4.31e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 90765923 | 90843971 | ENSMUSG00000048126 | 0.4734 | - | Col6a3 | protein_coding | 6.00e-10 | 1.25e-07 | 5.46e-02 | -4.195920 | 2.29e+02 | 1.64e+02 | 6.12e+02 | 7.85e+00 | 7.37e+00 | 9.26e+00 | 2.77e-02 | 1.99e-02 | 7.41e-02 | 1.90e+01 | 1.50e+01 | 1.80e+01 | 4.32e+00 | 4.00e+00 | 4.25e+00 | 2.30e-03 | 1.82e-03 | 2.18e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 36450537 | 36455392 | ENSMUSG00000054905 | 0.4016 | - | Stfa3 | protein_coding | 6.08e-10 | 1.26e-07 | 4.55e-02 | -4.459432 | 3.00e+01 | 9.50e+01 | 4.00e+00 | 4.95e+00 | 6.58e+00 | 2.32e+00 | 2.26e-02 | 7.16e-02 | 3.02e-03 | 2.00e+00 | 0.00e+00 | 1.00e+00 | 1.58e+00 | 0.00e+00 | 1.00e+00 | 1.51e-03 | 0.00e+00 | 7.54e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 180934772 | 180954699 | ENSMUSG00000027574 | 0.4915 | - | Nkain4 | protein_coding | 7.27e-10 | 1.49e-07 | 2.26e+01 | 4.495224 | 4.00e+00 | 1.20e+01 | 1.90e+01 | 2.32e+00 | 3.70e+00 | 4.32e+00 | 6.14e-04 | 1.84e-03 | 2.92e-03 | 5.34e+02 | 1.17e+02 | 2.03e+02 | 9.06e+00 | 6.88e+00 | 7.67e+00 | 8.19e-02 | 1.80e-02 | 3.11e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 92209893 | 92215408 | ENSMUSG00000029409 | 0.4329 | - | U90926 | protein_coding | 8.45e-10 | 1.70e-07 | 2.74e-02 | -5.191344 | 1.44e+02 | 1.69e+02 | 1.59e+02 | 7.18e+00 | 7.41e+00 | 7.32e+00 | 9.76e-02 | 1.15e-01 | 1.08e-01 | 3.00e+00 | 3.00e+00 | 4.00e+00 | 2.00e+00 | 2.00e+00 | 2.32e+00 | 2.03e-03 | 2.03e-03 | 2.71e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr18 | 66045302 | 66302739 | ENSMUSG00000046318 | 0.4346 | - | Ccbe1 | protein_coding | 8.48e-10 | 1.70e-07 | 4.11e-02 | -4.603214 | 4.44e+02 | 2.82e+02 | 1.46e+02 | 8.80e+00 | 8.14e+00 | 7.20e+00 | 5.04e-02 | 3.20e-02 | 1.66e-02 | 1.10e+01 | 1.30e+01 | 9.00e+00 | 3.58e+00 | 3.81e+00 | 3.32e+00 | 1.25e-03 | 1.48e-03 | 1.02e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group3_vs_group7.Download the whole result list for group3_vs_group7.DEG table for the contrast group4_vs_group8The following table presents the top 5% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast group4_vs_group8. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | FDR_deseq | natural_normalized_fold_change_group4_vs_group8 | log2_normalized_fold_change_group4_vs_group8 | natural_normalized_counts_10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs | natural_normalized_counts_11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs | log2_normalized_counts_10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs | log2_normalized_counts_11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs | rpgm_normalized_counts_10_TNF_DeltaARE_ColVI_p75_f-f_1_SFs | rpgm_normalized_counts_11_TNF_DeltaARE_ColVI_p75_f-f_3_SFs | natural_normalized_counts_21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs | natural_normalized_counts_22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs | natural_normalized_counts_23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs | log2_normalized_counts_21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs | log2_normalized_counts_22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs | log2_normalized_counts_23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs | rpgm_normalized_counts_21_TNF_DeltaARE_ColVI_p75_f-f_1_VICs | rpgm_normalized_counts_22_TNF_DeltaARE_ColVI_p75_f-f_2_VICs | rpgm_normalized_counts_23_TNF_DeltaARE_ColVI_p75_f-f_3_VICs | LN | AR | MD | MN | QN | KN | CM | BT |
|---|
| chr15 | 75044018 | 75048830 | ENSMUSG00000079018 | 0.4820 | - | Ly6c1 | protein_coding | 6.72e-28 | 1.29e-23 | 1.83e-03 | -9.090774 | 1.18e+03 | 3.18e+03 | 1.02e+01 | 1.16e+01 | 3.28e-01 | 8.84e-01 | 3.00e+00 | 2.00e+00 | 4.00e+00 | 2.00e+00 | 1.58e+00 | 2.32e+00 | 8.34e-04 | 5.56e-04 | 1.11e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 92751590 | 92794818 | ENSMUSG00000021702 | 0.4601 | - | Thbs4 | protein_coding | 7.02e-27 | 6.75e-23 | 1.57e-03 | -9.315958 | 6.39e+03 | 2.53e+03 | 1.26e+01 | 1.13e+01 | 2.39e+00 | 9.49e-01 | 0.00e+00 | 0.00e+00 | 1.80e+01 | 0.00e+00 | 0.00e+00 | 4.25e+00 | 0.00e+00 | 0.00e+00 | 6.74e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56117619 | 56120625 | ENSMUSG00000022156 | 0.4865 | - | Gzme | protein_coding | 7.18e-26 | 4.61e-22 | 1.94e-03 | -9.008078 | 4.49e+03 | 1.00e+03 | 1.21e+01 | 9.97e+00 | 3.30e+00 | 7.37e-01 | 2.00e+00 | 6.00e+00 | 5.00e+00 | 1.58e+00 | 2.81e+00 | 2.58e+00 | 1.47e-03 | 4.41e-03 | 3.67e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 43020811 | 43170818 | ENSMUSG00000051920 | 0.3829 | - | Rspo2 | protein_coding | 2.52e-23 | 1.21e-19 | 3.26e-03 | -8.260214 | 3.72e+02 | 6.48e+02 | 8.54e+00 | 9.34e+00 | 1.25e-01 | 2.18e-01 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 3.37e-04 | 3.37e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 4133531 | 4138819 | ENSMUSG00000045573 | 0.4386 | - | Penk | protein_coding | 1.95e-22 | 7.52e-19 | 4.47e-03 | -7.806976 | 2.64e+03 | 2.44e+03 | 1.14e+01 | 1.13e+01 | 9.37e-01 | 8.65e-01 | 2.00e+00 | 4.00e+00 | 2.50e+01 | 1.58e+00 | 2.32e+00 | 4.70e+00 | 7.10e-04 | 1.42e-03 | 8.88e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56365068 | 56388551 | ENSMUSG00000022229 | 0.4575 | + | Atp12a | protein_coding | 1.84e-21 | 5.91e-18 | 3.57e-03 | -8.128768 | 4.79e+02 | 4.52e+02 | 8.91e+00 | 8.82e+00 | 2.54e-01 | 2.40e-01 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 5.31e-04 | 5.31e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56231401 | 56234656 | ENSMUSG00000079186 | 0.4877 | - | Gzmc | protein_coding | 5.06e-21 | 1.39e-17 | 2.60e-03 | -8.588715 | 6.11e+02 | 1.57e+02 | 9.26e+00 | 7.30e+00 | 4.47e-01 | 1.15e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 142650766 | 142666816 | ENSMUSG00000048583 | 0.5479 | - | Igf2 | protein_coding | 2.42e-20 | 5.83e-17 | 5.20e-03 | -7.588179 | 1.17e+03 | 6.20e+02 | 1.02e+01 | 9.28e+00 | 1.67e-01 | 8.80e-02 | 3.00e+00 | 1.00e+00 | 7.00e+00 | 2.00e+00 | 1.00e+00 | 3.00e+00 | 4.26e-04 | 1.42e-04 | 9.94e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 56477846 | 56690128 | ENSMUSG00000035258 | 0.3922 | + | Abi3bp | protein_coding | 1.49e-19 | 3.19e-16 | 8.26e-03 | -6.919715 | 4.08e+02 | 7.20e+02 | 8.68e+00 | 9.49e+00 | 1.75e-01 | 3.09e-01 | 2.00e+00 | 1.00e+00 | 8.00e+00 | 1.58e+00 | 1.00e+00 | 3.17e+00 | 8.57e-04 | 4.29e-04 | 3.43e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 65265180 | 65280605 | ENSMUSG00000042254 | 0.4935 | + | Cilp | protein_coding | 1.88e-19 | 3.62e-16 | 3.37e-03 | -8.214319 | 3.63e+02 | 2.29e+02 | 8.51e+00 | 7.85e+00 | 3.27e-02 | 2.06e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52244393 | 52249799 | ENSMUSG00000086427 | 0.5302 | + | Hoxa11os | processed_transcript | 2.54e-19 | 4.44e-16 | 4.06e-03 | -7.945444 | 2.20e+02 | 2.71e+02 | 7.79e+00 | 8.09e+00 | 8.67e-02 | 1.07e-01 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 43506966 | 43513729 | ENSMUSG00000028463 | 0.5099 | + | Car9 | protein_coding | 3.23e-19 | 5.18e-16 | 5.61e-03 | -7.478770 | 9.09e+02 | 5.16e+02 | 9.83e+00 | 9.01e+00 | 1.97e-01 | 1.12e-01 | 2.00e+00 | 2.00e+00 | 5.00e+00 | 1.58e+00 | 1.58e+00 | 2.58e+00 | 4.34e-04 | 4.34e-04 | 1.08e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 70373558 | 70382066 | ENSMUSG00000031849 | 0.5643 | + | Comp | protein_coding | 7.40e-19 | 1.10e-15 | 9.14e-03 | -6.773846 | 5.17e+02 | 1.01e+03 | 9.02e+00 | 9.99e+00 | 8.35e-02 | 1.64e-01 | 1.10e+01 | 6.00e+00 | 1.00e+00 | 3.58e+00 | 2.81e+00 | 1.00e+00 | 1.78e-03 | 9.69e-04 | 1.61e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74668310 | 74671599 | ENSMUSG00000001819 | 0.4617 | + | Hoxd13 | protein_coding | 1.56e-17 | 2.15e-14 | 4.81e-03 | -7.700440 | 1.88e+02 | 2.26e+02 | 7.56e+00 | 7.83e+00 | 6.92e-02 | 8.32e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 24718138 | 24774303 | ENSMUSG00000031965 | 0.4010 | - | Tbx20 | protein_coding | 3.62e-17 | 4.64e-14 | 4.30e+02 | 8.749151 | 4.00e+00 | 1.00e+00 | 2.32e+00 | 1.00e+00 | 3.13e-04 | 7.83e-05 | 1.45e+03 | 1.52e+03 | 1.55e+03 | 1.05e+01 | 1.06e+01 | 1.06e+01 | 1.14e-01 | 1.19e-01 | 1.21e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 93235841 | 93301065 | ENSMUSG00000047793 | 0.4874 | + | Sned1 | protein_coding | 6.34e-17 | 7.62e-14 | 1.27e-02 | -6.299736 | 1.47e+03 | 1.26e+03 | 1.05e+01 | 1.03e+01 | 1.50e-01 | 1.29e-01 | 1.60e+01 | 1.60e+01 | 1.70e+01 | 4.09e+00 | 4.09e+00 | 4.17e+00 | 1.63e-03 | 1.63e-03 | 1.73e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 71957921 | 71963723 | ENSMUSG00000060969 | 0.5346 | - | Irx1 | protein_coding | 9.11e-17 | 1.03e-13 | 9.37e-03 | -6.736966 | 3.36e+02 | 3.02e+02 | 8.40e+00 | 8.24e+00 | 1.72e-01 | 1.55e-01 | 0.00e+00 | 1.00e+00 | 5.00e+00 | 0.00e+00 | 1.00e+00 | 2.58e+00 | 0.00e+00 | 5.13e-04 | 2.57e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 23057865 | 23082068 | ENSMUSG00000022875 | 0.4312 | + | Kng1 | protein_coding | 3.03e-16 | 3.24e-13 | 5.99e-03 | -7.382624 | 2.35e+02 | 2.08e+02 | 7.88e+00 | 7.71e+00 | 5.31e-02 | 4.70e-02 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 2.26e-04 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 133850980 | 133865577 | ENSMUSG00000031250 | 0.4123 | + | Tnmd | protein_coding | 5.07e-16 | 5.14e-13 | 8.52e-03 | -6.875640 | 3.79e+02 | 1.67e+02 | 8.57e+00 | 7.39e+00 | 2.66e-01 | 1.17e-01 | 0.00e+00 | 2.00e+00 | 2.00e+00 | 0.00e+00 | 1.58e+00 | 1.58e+00 | 0.00e+00 | 1.40e-03 | 1.40e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 54054928 | 54069014 | ENSMUSG00000020388 | 0.5357 | - | Pdlim4 | protein_coding | 5.61e-16 | 5.40e-13 | 1.69e-02 | -5.887221 | 1.07e+03 | 1.77e+03 | 1.01e+01 | 1.08e+01 | 2.03e-01 | 3.37e-01 | 2.10e+01 | 3.00e+01 | 1.80e+01 | 4.46e+00 | 4.95e+00 | 4.25e+00 | 3.99e-03 | 5.71e-03 | 3.42e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 7272514 | 7283331 | ENSMUSG00000050578 | 0.3772 | + | Mmp13 | protein_coding | 7.53e-16 | 6.90e-13 | 1.51e-02 | -6.047753 | 1.01e+03 | 7.06e+02 | 9.98e+00 | 9.47e+00 | 4.10e-01 | 2.86e-01 | 2.00e+00 | 2.10e+01 | 1.30e+01 | 1.58e+00 | 4.46e+00 | 3.81e+00 | 8.11e-04 | 8.51e-03 | 5.27e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52231197 | 52240854 | ENSMUSG00000000938 | 0.5046 | - | Hoxa10 | protein_coding | 1.79e-15 | 1.57e-12 | 7.33e-03 | -7.092757 | 6.90e+01 | 2.02e+02 | 6.13e+00 | 7.67e+00 | 2.69e-02 | 7.88e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 24413392 | 24417835 | ENSMUSG00000038276 | 0.5473 | + | Asic3 | protein_coding | 1.95e-15 | 1.64e-12 | 8.73e-03 | -6.839776 | 5.80e+02 | 2.58e+02 | 9.18e+00 | 8.02e+00 | 1.27e-01 | 5.64e-02 | 0.00e+00 | 2.00e+00 | 6.00e+00 | 0.00e+00 | 1.58e+00 | 2.81e+00 | 0.00e+00 | 4.37e-04 | 1.31e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 150449412 | 150466165 | ENSMUSG00000006014 | 0.4048 | - | Prg4 | protein_coding | 9.29e-15 | 7.46e-12 | 1.37e-02 | -6.193115 | 4.48e+02 | 4.28e+02 | 8.81e+00 | 8.74e+00 | 1.03e-01 | 9.88e-02 | 8.00e+00 | 5.00e+00 | 2.00e+00 | 3.17e+00 | 2.58e+00 | 1.58e+00 | 1.85e-03 | 1.15e-03 | 4.61e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 142575529 | 142578143 | ENSMUSG00000000031 | 0.5583 | - | H19 | lincRNA | 1.28e-14 | 9.84e-12 | 1.67e-02 | -5.899788 | 1.73e+03 | 5.00e+02 | 1.08e+01 | 8.97e+00 | 6.12e-01 | 1.77e-01 | 1.90e+01 | 2.00e+01 | 1.40e+01 | 4.32e+00 | 4.39e+00 | 3.91e+00 | 6.73e-03 | 7.08e-03 | 4.96e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164354070 | 164389095 | ENSMUSG00000017002 | 0.4508 | - | Slpi | protein_coding | 1.84e-14 | 1.35e-11 | 2.23e-02 | -5.489848 | 7.86e+02 | 1.37e+03 | 9.62e+00 | 1.04e+01 | 2.09e-01 | 3.65e-01 | 4.00e+00 | 5.30e+01 | 1.20e+01 | 2.32e+00 | 5.75e+00 | 3.70e+00 | 1.07e-03 | 1.41e-02 | 3.20e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 136038496 | 136046487 | ENSMUSG00000042985 | 0.5240 | + | Upk3b | protein_coding | 1.90e-14 | 1.35e-11 | 3.90e+02 | 8.606097 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 3.58e+02 | 2.98e+02 | 5.10e+02 | 8.49e+00 | 8.22e+00 | 9.00e+00 | 9.82e-02 | 8.17e-02 | 1.40e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 22985854 | 23029101 | ENSMUSG00000060459 | 0.4230 | - | Kng2 | protein_coding | 1.96e-14 | 1.35e-11 | 1.26e-02 | -6.312883 | 2.24e+02 | 1.98e+02 | 7.81e+00 | 7.64e+00 | 2.35e-02 | 2.08e-02 | 1.00e+00 | 4.00e+00 | 0.00e+00 | 1.00e+00 | 2.32e+00 | 0.00e+00 | 1.05e-04 | 4.20e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 120729489 | 120732114 | ENSMUSG00000025150 | 0.5678 | - | Cbr2 | protein_coding | 2.14e-14 | 1.42e-11 | 1.83e-02 | -5.770113 | 2.86e+03 | 2.37e+03 | 1.15e+01 | 1.12e+01 | 1.02e+00 | 8.48e-01 | 8.00e+01 | 3.80e+01 | 2.30e+01 | 6.34e+00 | 5.29e+00 | 4.58e+00 | 2.86e-02 | 1.36e-02 | 8.22e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 101266846 | 101274792 | ENSMUSG00000023034 | 0.5561 | + | Nr4a1 | protein_coding | 2.54e-14 | 1.63e-11 | 2.28e-02 | -5.457207 | 1.55e+03 | 1.90e+03 | 1.06e+01 | 1.09e+01 | 8.64e-01 | 1.06e+00 | 1.40e+01 | 5.00e+01 | 5.10e+01 | 3.91e+00 | 5.67e+00 | 5.70e+00 | 7.80e-03 | 2.79e-02 | 2.84e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 40429570 | 40465415 | ENSMUSG00000026069 | 0.4155 | + | Il1rl1 | protein_coding | 3.28e-14 | 2.04e-11 | 2.26e-02 | -5.469749 | 7.39e+02 | 9.43e+02 | 9.53e+00 | 9.88e+00 | 8.74e-02 | 1.12e-01 | 7.00e+00 | 3.70e+01 | 1.00e+01 | 3.00e+00 | 5.25e+00 | 3.46e+00 | 8.28e-04 | 4.38e-03 | 1.18e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 143078473 | 143081713 | ENSMUSG00000027416 | 0.3891 | + | Otor | protein_coding | 3.54e-14 | 2.09e-11 | 9.57e-03 | -6.707359 | 1.23e+02 | 8.40e+01 | 6.95e+00 | 6.41e+00 | 6.88e-02 | 4.70e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 60174405 | 60177365 | ENSMUSG00000052957 | 0.5836 | - | Gas1 | protein_coding | 3.58e-14 | 2.09e-11 | 2.01e-02 | -5.638600 | 4.82e+02 | 6.12e+02 | 8.92e+00 | 9.26e+00 | 2.02e-01 | 2.57e-01 | 7.00e+00 | 2.00e+01 | 3.00e+00 | 3.00e+00 | 4.39e+00 | 2.00e+00 | 2.94e-03 | 8.40e-03 | 1.26e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 160085029 | 160153580 | ENSMUSG00000026725 | 0.4388 | - | Tnn | protein_coding | 1.08e-13 | 6.09e-11 | 8.46e-03 | -6.885086 | 3.00e+02 | 9.20e+01 | 8.23e+00 | 6.54e+00 | 1.33e-01 | 4.08e-02 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 8.87e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 112116017 | 112159057 | ENSMUSG00000030772 | 0.4891 | - | Dkk3 | protein_coding | 1.60e-13 | 8.82e-11 | 2.40e-02 | -5.378566 | 9.47e+02 | 8.26e+02 | 9.89e+00 | 9.69e+00 | 2.75e-01 | 2.40e-01 | 1.90e+01 | 3.20e+01 | 1.00e+01 | 4.32e+00 | 5.04e+00 | 3.46e+00 | 5.51e-03 | 9.28e-03 | 2.90e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 110279068 | 110281097 | ENSMUSG00000075707 | 0.5783 | + | Dio3 | protein_coding | 2.93e-13 | 1.57e-10 | 2.42e-02 | -5.366918 | 2.23e+03 | 2.61e+03 | 1.11e+01 | 1.14e+01 | 1.14e+00 | 1.34e+00 | 1.36e+02 | 2.40e+01 | 1.30e+01 | 7.10e+00 | 4.64e+00 | 3.81e+00 | 6.97e-02 | 1.23e-02 | 6.67e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 10094593 | 10131396 | ENSMUSG00000037254 | 0.4259 | - | Itih2 | protein_coding | 3.06e-13 | 1.59e-10 | 1.18e-02 | -6.406964 | 1.34e+02 | 2.60e+02 | 7.08e+00 | 8.03e+00 | 3.42e-02 | 6.63e-02 | 1.00e+00 | 2.00e+00 | 1.00e+00 | 1.00e+00 | 1.58e+00 | 1.00e+00 | 2.55e-04 | 5.10e-04 | 2.55e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52223100 | 52231089 | ENSMUSG00000038227 | 0.5144 | - | Hoxa9 | protein_coding | 3.55e-13 | 1.80e-10 | 1.19e-02 | -6.398744 | 9.90e+01 | 1.24e+02 | 6.64e+00 | 6.97e+00 | 1.99e-02 | 2.49e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 2.01e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 56288647 | 56296551 | ENSMUSG00000021508 | 0.5293 | - | Cxcl14 | protein_coding | 4.18e-13 | 2.06e-10 | 1.65e-02 | -5.922799 | 4.81e+03 | 4.85e+03 | 1.22e+01 | 1.22e+01 | 2.01e+00 | 2.02e+00 | 9.60e+01 | 9.10e+01 | 4.90e+01 | 6.60e+00 | 6.52e+00 | 5.64e+00 | 4.00e-02 | 3.79e-02 | 2.04e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56082166 | 56085216 | ENSMUSG00000022157 | 0.4569 | - | Mcpt8 | protein_coding | 4.61e-13 | 2.22e-10 | 2.53e-02 | -5.302950 | 2.37e+02 | 3.40e+02 | 7.89e+00 | 8.41e+00 | 1.77e-01 | 2.54e-01 | 2.00e+00 | 1.40e+01 | 3.00e+00 | 1.58e+00 | 3.91e+00 | 2.00e+00 | 1.50e-03 | 1.05e-02 | 2.25e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 123891769 | 123894751 | ENSMUSG00000031972 | 0.5675 | - | Acta1 | protein_coding | 1.37e-12 | 6.44e-10 | 2.41e-02 | -5.372140 | 2.26e+02 | 2.69e+02 | 7.83e+00 | 8.08e+00 | 8.22e-02 | 9.79e-02 | 3.00e+00 | 3.00e+00 | 9.00e+00 | 2.00e+00 | 2.00e+00 | 3.32e+00 | 1.09e-03 | 1.09e-03 | 3.28e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74679557 | 74687016 | ENSMUSG00000042499 | 0.5307 | + | Hoxd11 | protein_coding | 1.51e-12 | 6.90e-10 | 1.05e-02 | -6.577429 | 9.00e+01 | 9.90e+01 | 6.51e+00 | 6.64e+00 | 3.55e-02 | 3.90e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 127514939 | 127517152 | ENSMUSG00000040280 | 0.5664 | + | Ndufa4l2 | protein_coding | 1.58e-12 | 7.07e-10 | 2.13e-02 | -5.554589 | 2.46e+02 | 2.22e+02 | 7.95e+00 | 7.80e+00 | 1.29e-01 | 1.16e-01 | 8.00e+00 | 0.00e+00 | 4.00e+00 | 3.17e+00 | 0.00e+00 | 2.32e+00 | 4.20e-03 | 0.00e+00 | 2.10e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 56129556 | 56132608 | ENSMUSG00000059256 | 0.4923 | - | Gzmd | protein_coding | 4.12e-12 | 1.80e-09 | 9.49e-03 | -6.719389 | 2.35e+02 | 4.40e+01 | 7.88e+00 | 5.49e+00 | 1.71e-01 | 3.20e-02 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 7.28e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 92321347 | 92328079 | ENSMUSG00000029417 | 0.4151 | - | Cxcl9 | protein_coding | 4.55e-12 | 1.91e-09 | 9.35e-03 | -6.741467 | 1.45e+02 | 6.70e+01 | 7.19e+00 | 6.09e+00 | 2.92e-02 | 1.35e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 40423815 | 40510268 | ENSMUSG00000039470 | 0.3927 | + | Zdhhc2 | protein_coding | 4.56e-12 | 1.91e-09 | 8.82e+01 | 6.461889 | 1.40e+01 | 2.40e+01 | 3.91e+00 | 4.64e+00 | 1.69e-03 | 2.91e-03 | 2.12e+03 | 9.44e+02 | 2.22e+03 | 1.10e+01 | 9.88e+00 | 1.11e+01 | 2.56e-01 | 1.14e-01 | 2.69e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 174833785 | 174921819 | ENSMUSG00000050069 | 0.4091 | - | Grem2 | protein_coding | 7.27e-12 | 2.98e-09 | 2.07e-02 | -5.592457 | 1.43e+02 | 2.41e+02 | 7.17e+00 | 7.92e+00 | 3.37e-02 | 5.68e-02 | 3.00e+00 | 6.00e+00 | 0.00e+00 | 2.00e+00 | 2.81e+00 | 0.00e+00 | 7.07e-04 | 1.41e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 69029289 | 69041401 | ENSMUSG00000014813 | 0.4445 | + | Stc1 | protein_coding | 8.32e-12 | 3.34e-09 | 3.34e-02 | -4.905888 | 1.57e+03 | 1.31e+03 | 1.06e+01 | 1.04e+01 | 3.78e-01 | 3.15e-01 | 1.80e+01 | 1.01e+02 | 2.20e+01 | 4.25e+00 | 6.67e+00 | 4.52e+00 | 4.34e-03 | 2.43e-02 | 5.30e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr14 | 103513341 | 103613346 | ENSMUSG00000022123 | 0.4082 | + | Scel | protein_coding | 9.48e-12 | 3.73e-09 | 1.21e+02 | 6.921699 | 2.00e+00 | 3.00e+00 | 1.58e+00 | 2.00e+00 | 9.09e-04 | 1.36e-03 | 4.05e+02 | 1.88e+02 | 6.77e+02 | 8.67e+00 | 7.56e+00 | 9.41e+00 | 1.84e-01 | 8.54e-02 | 3.08e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 58156268 | 58204306 | ENSMUSG00000037206 | 0.4732 | - | Islr | protein_coding | 1.51e-11 | 5.78e-09 | 3.64e-02 | -4.781148 | 1.13e+03 | 1.14e+03 | 1.01e+01 | 1.02e+01 | 3.57e-01 | 3.58e-01 | 5.70e+01 | 3.30e+01 | 3.10e+01 | 5.86e+00 | 5.09e+00 | 5.00e+00 | 1.79e-02 | 1.04e-02 | 9.76e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 54745702 | 54754039 | ENSMUSG00000037362 | 0.4183 | + | Nov | protein_coding | 1.54e-11 | 5.78e-09 | 3.48e-02 | -4.845490 | 1.91e+02 | 4.97e+02 | 7.58e+00 | 8.96e+00 | 6.85e-02 | 1.78e-01 | 1.90e+01 | 6.00e+00 | 8.00e+00 | 4.32e+00 | 2.81e+00 | 3.17e+00 | 6.81e-03 | 2.15e-03 | 2.87e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 151796502 | 151837630 | ENSMUSG00000028036 | 0.4114 | - | Ptgfr | protein_coding | 1.56e-11 | 5.78e-09 | 1.60e-02 | -5.963474 | 1.08e+02 | 9.80e+01 | 6.77e+00 | 6.63e+00 | 1.67e-02 | 1.51e-02 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.55e-04 | 1.55e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr8 | 54954843 | 55060871 | ENSMUSG00000031517 | 0.3518 | + | Gpm6a | protein_coding | 1.74e-11 | 6.31e-09 | 2.18e+02 | 7.765977 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 2.05e+02 | 9.40e+01 | 3.51e+02 | 7.69e+00 | 6.57e+00 | 8.46e+00 | 6.41e-02 | 2.94e-02 | 1.10e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 115450311 | 115587780 | ENSMUSG00000020140 | 0.4222 | - | Lgr5 | protein_coding | 3.91e-11 | 1.40e-08 | 2.50e-02 | -5.323315 | 1.37e+02 | 2.08e+02 | 7.11e+00 | 7.71e+00 | 1.48e-02 | 2.25e-02 | 4.00e+00 | 1.00e+00 | 5.00e+00 | 2.32e+00 | 1.00e+00 | 2.58e+00 | 4.34e-04 | 1.08e-04 | 5.42e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 107397099 | 107403376 | ENSMUSG00000031239 | 0.3633 | - | Itm2a | protein_coding | 4.14e-11 | 1.45e-08 | 2.21e-02 | -5.502121 | 2.01e+02 | 2.20e+02 | 7.66e+00 | 7.79e+00 | 9.82e-02 | 1.08e-01 | 4.00e+00 | 4.00e+00 | 3.00e+00 | 2.32e+00 | 2.32e+00 | 2.00e+00 | 1.96e-03 | 1.96e-03 | 1.47e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 164777161 | 164779967 | ENSMUSG00000017300 | 0.5426 | - | Tnnc2 | protein_coding | 5.54e-11 | 1.91e-08 | 2.02e-02 | -5.629357 | 6.90e+01 | 9.40e+01 | 6.13e+00 | 6.57e+00 | 2.60e-02 | 3.55e-02 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 7.55e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 36111965 | 36119844 | ENSMUSG00000024803 | 0.4397 | - | Ankrd1 | protein_coding | 5.76e-11 | 1.94e-08 | 1.41e+02 | 7.137815 | 6.90e+01 | 4.30e+01 | 6.13e+00 | 5.46e+00 | 3.46e-02 | 2.15e-02 | 1.04e+04 | 6.32e+03 | 7.34e+03 | 1.33e+01 | 1.26e+01 | 1.28e+01 | 5.22e+00 | 3.17e+00 | 3.68e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 82057823 | 82062955 | ENSMUSG00000020676 | 0.4282 | + | Ccl11 | protein_coding | 6.06e-11 | 2.01e-08 | 1.09e-02 | -6.519636 | 2.13e+02 | 1.52e+02 | 7.74e+00 | 7.26e+00 | 1.12e-01 | 8.01e-02 | 0.00e+00 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 74994877 | 74998031 | ENSMUSG00000075602 | 0.4887 | - | Ly6a | protein_coding | 9.20e-11 | 3.00e-08 | 3.78e-02 | -4.723702 | 4.52e+03 | 9.26e+03 | 1.21e+01 | 1.32e+01 | 1.56e+00 | 3.20e+00 | 4.35e+02 | 1.95e+02 | 1.49e+02 | 8.77e+00 | 7.61e+00 | 7.23e+00 | 1.50e-01 | 6.74e-02 | 5.15e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 184610280 | 184629473 | ENSMUSG00000103308 | 0.4423 | - | Gm37800 | lincRNA | 9.75e-11 | 3.13e-08 | 1.80e-02 | -5.794416 | 5.10e+01 | 1.32e+02 | 5.70e+00 | 7.06e+00 | 2.03e-02 | 5.26e-02 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 0.00e+00 | 7.97e-04 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 78175959 | 78738012 | ENSMUSG00000059146 | 0.4391 | - | Ntrk3 | protein_coding | 1.51e-10 | 4.77e-08 | 2.12e-02 | -5.558421 | 1.93e+02 | 1.82e+02 | 7.60e+00 | 7.52e+00 | 4.74e-03 | 4.47e-03 | 2.00e+00 | 4.00e+00 | 3.00e+00 | 1.58e+00 | 2.32e+00 | 2.00e+00 | 4.91e-05 | 9.82e-05 | 7.36e-05 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 121489824 | 121495694 | ENSMUSG00000032532 | 0.4916 | - | Cck | protein_coding | 2.31e-10 | 7.18e-08 | 2.47e-02 | -5.339850 | 1.03e+02 | 1.92e+02 | 6.70e+00 | 7.59e+00 | 3.67e-02 | 6.83e-02 | 1.00e+00 | 6.00e+00 | 1.00e+00 | 1.00e+00 | 2.81e+00 | 1.00e+00 | 3.56e-04 | 2.14e-03 | 3.56e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 97975602 | 98004695 | ENSMUSG00000022483 | 0.5486 | - | Col2a1 | protein_coding | 2.41e-10 | 7.38e-08 | 1.65e-02 | -5.918863 | 1.17e+02 | 1.23e+02 | 6.88e+00 | 6.95e+00 | 1.41e-02 | 1.48e-02 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 1.00e+00 | 1.58e+00 | 0.00e+00 | 1.20e-04 | 2.40e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 148495183 | 148500460 | ENSMUSG00000028989 | 0.4970 | - | Angptl7 | protein_coding | 2.59e-10 | 7.81e-08 | 2.71e-02 | -5.207680 | 9.00e+01 | 1.79e+02 | 6.51e+00 | 7.49e+00 | 4.04e-02 | 8.04e-02 | 7.00e+00 | 0.00e+00 | 1.00e+00 | 3.00e+00 | 0.00e+00 | 1.00e+00 | 3.14e-03 | 0.00e+00 | 4.49e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 93014205 | 93015687 | ENSMUSG00000027913 | 0.4990 | - | Crct1 | protein_coding | 3.15e-10 | 9.33e-08 | 4.78e+01 | 5.579944 | 1.30e+01 | 2.10e+01 | 3.81e+00 | 4.46e+00 | 8.29e-03 | 1.34e-02 | 1.04e+03 | 8.29e+02 | 7.13e+02 | 1.00e+01 | 9.70e+00 | 9.48e+00 | 6.62e-01 | 5.28e-01 | 4.54e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 126286793 | 126314330 | ENSMUSG00000056174 | 0.5298 | + | Col8a2 | protein_coding | 3.27e-10 | 9.55e-08 | 2.45e-02 | -5.353147 | 9.60e+01 | 1.20e+02 | 6.60e+00 | 6.92e+00 | 2.11e-02 | 2.64e-02 | 2.00e+00 | 1.00e+00 | 2.00e+00 | 1.58e+00 | 1.00e+00 | 1.58e+00 | 4.41e-04 | 2.20e-04 | 4.41e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 66924295 | 66945404 | ENSMUSG00000061816 | 0.3829 | - | Myl1 | protein_coding | 4.28e-10 | 1.23e-07 | 1.18e-02 | -6.409391 | 1.12e+02 | 5.60e+01 | 6.82e+00 | 5.83e+00 | 1.42e-02 | 7.11e-03 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 46740497 | 46742980 | ENSMUSG00000074115 | 0.5382 | - | Saa1 | protein_coding | 4.48e-10 | 1.27e-07 | 1.54e-02 | -6.025535 | 1.25e+02 | 1.77e+02 | 6.98e+00 | 7.48e+00 | 8.56e-02 | 1.21e-01 | 1.00e+00 | 3.00e+00 | 0.00e+00 | 1.00e+00 | 2.00e+00 | 0.00e+00 | 6.84e-04 | 2.05e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 87948666 | 87953376 | ENSMUSG00000004885 | 0.5245 | + | Crabp2 | protein_coding | 5.36e-10 | 1.50e-07 | 2.41e-02 | -5.372865 | 1.61e+02 | 5.80e+01 | 7.34e+00 | 5.88e+00 | 9.79e-02 | 3.53e-02 | 2.00e+00 | 1.00e+00 | 2.00e+00 | 1.58e+00 | 1.00e+00 | 1.58e+00 | 1.22e-03 | 6.08e-04 | 1.22e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 78920787 | 78960254 | ENSMUSG00000020826 | 0.5008 | + | Nos2 | protein_coding | 5.71e-10 | 1.57e-07 | 3.91e-02 | -4.677612 | 5.83e+02 | 2.51e+02 | 9.19e+00 | 7.98e+00 | 1.94e-01 | 8.34e-02 | 1.00e+00 | 3.60e+01 | 9.00e+00 | 1.00e+00 | 5.21e+00 | 3.32e+00 | 3.32e-04 | 1.20e-02 | 2.99e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 33027416 | 33041884 | ENSMUSG00000021403 | 0.4160 | + | Serpinb9b | protein_coding | 6.02e-10 | 1.63e-07 | 3.73e+01 | 5.220551 | 2.00e+01 | 6.00e+00 | 4.39e+00 | 2.81e+00 | 6.29e-03 | 1.89e-03 | 3.66e+02 | 7.93e+02 | 4.04e+02 | 8.52e+00 | 9.63e+00 | 8.66e+00 | 1.15e-01 | 2.50e-01 | 1.27e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 120474538 | 120505024 | ENSMUSG00000026390 | 0.4694 | - | Marco | protein_coding | 7.38e-10 | 1.97e-07 | 3.65e+01 | 5.189825 | 2.30e+01 | 3.00e+00 | 4.58e+00 | 2.00e+00 | 8.75e-03 | 1.14e-03 | 3.00e+02 | 7.73e+02 | 4.57e+02 | 8.23e+00 | 9.60e+00 | 8.84e+00 | 1.14e-01 | 2.94e-01 | 1.74e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 22817279 | 22820128 | ENSMUSG00000045680 | 0.4958 | - | Tcf21 | protein_coding | 7.93e-10 | 2.09e-07 | 9.32e+01 | 6.541742 | 2.00e+00 | 0.00e+00 | 1.58e+00 | 0.00e+00 | 1.17e-03 | 0.00e+00 | 2.55e+02 | 1.08e+02 | 1.93e+02 | 8.00e+00 | 6.77e+00 | 7.60e+00 | 1.49e-01 | 6.31e-02 | 1.13e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 145300828 | 145309557 | ENSMUSG00000031070 | 0.5267 | + | Mrgprf | protein_coding | 8.09e-10 | 2.11e-07 | 3.07e-02 | -5.027906 | 2.66e+02 | 3.41e+02 | 8.06e+00 | 8.42e+00 | 8.86e-02 | 1.14e-01 | 5.00e+00 | 1.10e+01 | 9.00e+00 | 2.58e+00 | 3.58e+00 | 3.32e+00 | 1.67e-03 | 3.66e-03 | 3.00e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 165595032 | 165771727 | ENSMUSG00000017897 | 0.4927 | + | Eya2 | protein_coding | 9.33e-10 | 2.39e-07 | 4.89e-02 | -4.353406 | 3.18e+02 | 3.75e+02 | 8.32e+00 | 8.55e+00 | 5.65e-02 | 6.66e-02 | 1.50e+01 | 1.90e+01 | 1.40e+01 | 4.00e+00 | 4.32e+00 | 3.91e+00 | 2.66e-03 | 3.38e-03 | 2.49e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 74691924 | 74695105 | ENSMUSG00000050368 | 0.4846 | + | Hoxd10 | protein_coding | 1.07e-09 | 2.71e-07 | 2.40e-02 | -5.381975 | 5.60e+01 | 8.10e+01 | 5.83e+00 | 6.36e+00 | 2.81e-02 | 4.07e-02 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 1.00e+00 | 0.00e+00 | 1.00e+00 | 5.02e-04 | 0.00e+00 | 5.02e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 71215789 | 71296243 | ENSMUSG00000013584 | 0.4211 | + | Aldh1a2 | protein_coding | 1.16e-09 | 2.89e-07 | 4.80e-02 | -4.379437 | 4.21e+03 | 1.92e+03 | 1.20e+01 | 1.09e+01 | 1.45e+00 | 6.62e-01 | 8.40e+01 | 1.44e+02 | 2.11e+02 | 6.41e+00 | 7.18e+00 | 7.73e+00 | 2.89e-02 | 4.96e-02 | 7.27e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 141010418 | 141015984 | ENSMUSG00000060572 | 0.5768 | + | Mfap2 | protein_coding | 1.24e-09 | 3.06e-07 | 3.70e-02 | -4.757967 | 2.47e+02 | 2.20e+02 | 7.95e+00 | 7.79e+00 | 8.48e-02 | 7.55e-02 | 9.00e+00 | 1.30e+01 | 1.00e+00 | 3.32e+00 | 3.81e+00 | 1.00e+00 | 3.09e-03 | 4.46e-03 | 3.43e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 165405028 | 165473230 | ENSMUSG00000018459 | 0.5038 | - | Slc13a3 | protein_coding | 1.65e-09 | 4.03e-07 | 4.15e+01 | 5.376487 | 1.40e+01 | 0.00e+00 | 3.91e+00 | 0.00e+00 | 2.57e-03 | 0.00e+00 | 1.68e+02 | 5.97e+02 | 2.29e+02 | 7.40e+00 | 9.22e+00 | 7.85e+00 | 3.09e-02 | 1.10e-01 | 4.21e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 32965209 | 32979067 | ENSMUSG00000042842 | 0.4316 | + | Serpinb6b | protein_coding | 1.80e-09 | 4.33e-07 | 6.81e+01 | 6.089818 | 2.00e+00 | 2.00e+00 | 1.58e+00 | 1.58e+00 | 5.76e-04 | 5.76e-04 | 1.31e+02 | 1.14e+02 | 3.65e+02 | 7.04e+00 | 6.85e+00 | 8.52e+00 | 3.77e-02 | 3.28e-02 | 1.05e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr5 | 104435118 | 104441050 | ENSMUSG00000029304 | 0.3787 | + | Spp1 | protein_coding | 1.92e-09 | 4.55e-07 | 5.96e-02 | -4.068947 | 6.40e+02 | 9.58e+02 | 9.32e+00 | 9.91e+00 | 1.51e-01 | 2.26e-01 | 1.40e+01 | 8.90e+01 | 3.70e+01 | 3.91e+00 | 6.49e+00 | 5.25e+00 | 3.31e-03 | 2.10e-02 | 8.74e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 14279506 | 14404790 | ENSMUSG00000023886 | 0.4618 | + | Smoc2 | protein_coding | 2.05e-09 | 4.81e-07 | 5.82e-02 | -4.102238 | 5.20e+02 | 6.23e+02 | 9.03e+00 | 9.29e+00 | 2.05e-01 | 2.46e-01 | 3.20e+01 | 3.30e+01 | 3.20e+01 | 5.04e+00 | 5.09e+00 | 5.04e+00 | 1.26e-02 | 1.30e-02 | 1.26e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr6 | 52214491 | 52221854 | ENSMUSG00000038236 | 0.5205 | - | Hoxa7 | protein_coding | 2.21e-09 | 5.13e-07 | 2.79e-02 | -5.163230 | 1.17e+02 | 9.60e+01 | 6.88e+00 | 6.60e+00 | 2.25e-02 | 1.85e-02 | 0.00e+00 | 5.00e+00 | 1.00e+00 | 0.00e+00 | 2.58e+00 | 1.00e+00 | 0.00e+00 | 9.64e-04 | 1.93e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 78182774 | 78209349 | ENSMUSG00000032348 | 0.4409 | + | Gsta4 | protein_coding | 2.47e-09 | 5.62e-07 | 1.97e-02 | -5.665336 | 1.57e+02 | 4.40e+01 | 7.30e+00 | 5.49e+00 | 5.86e-02 | 1.64e-02 | 0.00e+00 | 0.00e+00 | 3.00e+00 | 0.00e+00 | 0.00e+00 | 2.00e+00 | 0.00e+00 | 0.00e+00 | 1.12e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 54838898 | 54920146 | ENSMUSG00000022425 | 0.4043 | - | Enpp2 | protein_coding | 2.48e-09 | 5.62e-07 | 5.41e-02 | -4.209453 | 1.35e+02 | 2.33e+02 | 7.09e+00 | 7.87e+00 | 7.84e-02 | 1.35e-01 | 5.00e+00 | 1.80e+01 | 4.00e+00 | 2.58e+00 | 4.25e+00 | 2.32e+00 | 2.90e-03 | 1.05e-02 | 2.32e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 59316735 | 59344394 | ENSMUSG00000036334 | 0.4060 | - | Igsf10 | protein_coding | 2.52e-09 | 5.64e-07 | 2.83e-02 | -5.143930 | 8.70e+01 | 7.60e+01 | 6.46e+00 | 6.27e+00 | 2.05e-02 | 1.79e-02 | 1.00e+00 | 1.00e+00 | 2.00e+00 | 1.00e+00 | 1.00e+00 | 1.58e+00 | 2.36e-04 | 2.36e-04 | 4.72e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 77015489 | 77050670 | ENSMUSG00000018893 | 0.4993 | - | Mb | protein_coding | 2.72e-09 | 6.02e-07 | 1.58e-02 | -5.985842 | 1.03e+02 | 6.40e+01 | 6.70e+00 | 6.02e+00 | 6.09e-02 | 3.78e-02 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 1.00e+00 | 0.00e+00 | 0.00e+00 | 5.91e-04 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr4 | 144892827 | 144928209 | ENSMUSG00000066026 | 0.4886 | + | Dhrs3 | protein_coding | 3.34e-09 | 7.32e-07 | 5.74e-02 | -4.122500 | 7.93e+02 | 7.61e+02 | 9.63e+00 | 9.57e+00 | 1.30e-01 | 1.25e-01 | 5.60e+01 | 3.40e+01 | 4.10e+01 | 5.83e+00 | 5.13e+00 | 5.39e+00 | 9.21e-03 | 5.59e-03 | 6.74e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 101330605 | 101341938 | ENSMUSG00000019326 | 0.5094 | + | Aoc3 | protein_coding | 3.77e-09 | 8.15e-07 | 3.41e-02 | -4.873207 | 1.25e+02 | 1.27e+02 | 6.98e+00 | 7.00e+00 | 2.81e-02 | 2.86e-02 | 5.00e+00 | 2.00e+00 | 3.00e+00 | 2.58e+00 | 1.58e+00 | 2.00e+00 | 1.12e-03 | 4.50e-04 | 6.74e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr1 | 156804166 | 156939626 | ENSMUSG00000026594 | 0.4130 | - | Ralgps2 | protein_coding | 3.93e-09 | 8.41e-07 | 6.77e+01 | 6.080373 | 4.00e+00 | 0.00e+00 | 2.32e+00 | 0.00e+00 | 1.30e-04 | 0.00e+00 | 2.69e+02 | 1.77e+02 | 1.60e+02 | 8.08e+00 | 7.48e+00 | 7.33e+00 | 8.75e-03 | 5.76e-03 | 5.21e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 84783212 | 84876532 | ENSMUSG00000002020 | 0.4992 | - | Ltbp2 | protein_coding | 4.48e-09 | 9.48e-07 | 5.05e-02 | -4.306851 | 4.95e+03 | 3.05e+03 | 1.23e+01 | 1.16e+01 | 6.77e-01 | 4.17e-01 | 2.38e+02 | 2.42e+02 | 1.23e+02 | 7.90e+00 | 7.92e+00 | 6.95e+00 | 3.26e-02 | 3.31e-02 | 1.68e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 83766321 | 83774316 | ENSMUSG00000027996 | 0.4816 | + | Sfrp2 | protein_coding | 4.56e-09 | 9.55e-07 | 5.39e-02 | -4.213552 | 4.37e+03 | 2.68e+03 | 1.21e+01 | 1.14e+01 | 9.38e-01 | 5.76e-01 | 2.09e+02 | 1.79e+02 | 1.79e+02 | 7.71e+00 | 7.49e+00 | 7.49e+00 | 4.49e-02 | 3.84e-02 | 3.84e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 95568818 | 95587735 | ENSMUSG00000000120 | 0.5362 | - | Ngfr | protein_coding | 5.27e-09 | 1.09e-06 | 2.32e-02 | -5.429312 | 2.04e+02 | 1.10e+02 | 7.68e+00 | 6.79e+00 | 6.30e-02 | 3.40e-02 | 2.00e+00 | 6.00e+00 | 0.00e+00 | 1.58e+00 | 2.81e+00 | 0.00e+00 | 6.17e-04 | 1.85e-03 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 35170991 | 35176068 | ENSMUSG00000024397 | 0.5228 | - | Aif1 | protein_coding | 6.19e-09 | 1.27e-06 | 3.51e+01 | 5.133025 | 1.10e+01 | 9.00e+00 | 3.58e+00 | 3.32e+00 | 2.84e-03 | 2.32e-03 | 2.80e+02 | 3.06e+02 | 5.69e+02 | 8.13e+00 | 8.26e+00 | 9.15e+00 | 7.22e-02 | 7.89e-02 | 1.47e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr9 | 62677826 | 62783982 | ENSMUSG00000032243 | 0.4998 | + | Itga11 | protein_coding | 6.64e-09 | 1.35e-06 | 4.97e-02 | -4.330490 | 5.83e+02 | 2.60e+02 | 9.19e+00 | 8.03e+00 | 1.54e-01 | 6.86e-02 | 2.70e+01 | 1.80e+01 | 1.50e+01 | 4.81e+00 | 4.25e+00 | 4.00e+00 | 7.12e-03 | 4.75e-03 | 3.96e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 180934772 | 180954699 | ENSMUSG00000027574 | 0.4915 | - | Nkain4 | protein_coding | 7.37e-09 | 1.48e-06 | 3.59e+01 | 5.165059 | 9.00e+00 | 1.10e+01 | 3.32e+00 | 3.58e+00 | 1.38e-03 | 1.69e-03 | 5.33e+02 | 1.70e+02 | 4.78e+02 | 9.06e+00 | 7.42e+00 | 8.90e+00 | 8.18e-02 | 2.61e-02 | 7.33e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34862604 | 34898265 | ENSMUSG00000024371 | 0.4824 | - | C2 | protein_coding | 7.67e-09 | 1.51e-06 | 4.46e-02 | -4.486184 | 2.93e+02 | 2.13e+02 | 8.20e+00 | 7.74e+00 | 4.49e-02 | 3.26e-02 | 1.60e+01 | 1.10e+01 | 4.00e+00 | 4.09e+00 | 3.58e+00 | 2.32e+00 | 2.45e-03 | 1.69e-03 | 6.13e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 37108540 | 37179534 | ENSMUSG00000036144 | 0.3693 | + | Meox2 | protein_coding | 7.69e-09 | 1.51e-06 | 2.02e-02 | -5.629357 | 3.30e+01 | 6.40e+01 | 5.09e+00 | 6.02e+00 | 1.37e-02 | 2.65e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr17 | 34263209 | 34269418 | ENSMUSG00000073421 | 0.5225 | + | H2-Ab1 | protein_coding | 7.89e-09 | 1.53e-06 | 2.01e-02 | -5.634811 | 1.72e+02 | 9.10e+01 | 7.43e+00 | 6.52e+00 | 6.10e-02 | 3.23e-02 | 1.00e+00 | 1.00e+00 | 3.00e+00 | 1.00e+00 | 1.00e+00 | 2.00e+00 | 3.55e-04 | 3.55e-04 | 1.06e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr10 | 21882184 | 21999903 | ENSMUSG00000019970 | 0.4378 | + | Sgk1 | protein_coding | 9.25e-09 | 1.78e-06 | 6.18e-02 | -4.016012 | 2.55e+03 | 1.98e+03 | 1.13e+01 | 1.09e+01 | 2.29e-01 | 1.77e-01 | 1.32e+02 | 1.94e+02 | 9.10e+01 | 7.06e+00 | 7.61e+00 | 6.52e+00 | 1.19e-02 | 1.74e-02 | 8.18e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr19 | 38116620 | 38125321 | ENSMUSG00000024990 | 0.4990 | - | Rbp4 | protein_coding | 9.57e-09 | 1.82e-06 | 2.27e-02 | -5.459432 | 3.80e+01 | 1.36e+02 | 5.29e+00 | 7.10e+00 | 2.52e-02 | 9.03e-02 | 2.00e+00 | 1.00e+00 | 0.00e+00 | 1.58e+00 | 1.00e+00 | 0.00e+00 | 1.33e-03 | 6.64e-04 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 144729677 | 144760977 | ENSMUSG00000056025 | 0.4089 | - | Clca3a1 | protein_coding | 1.13e-08 | 2.14e-06 | 3.85e+01 | 5.265684 | 9.00e+00 | 6.00e+00 | 3.32e+00 | 2.81e+00 | 1.24e-03 | 8.27e-04 | 3.50e+02 | 1.64e+02 | 4.64e+02 | 8.46e+00 | 7.37e+00 | 8.86e+00 | 4.83e-02 | 2.26e-02 | 6.40e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr13 | 30336441 | 30382867 | ENSMUSG00000049115 | 0.4305 | + | Agtr1a | protein_coding | 1.20e-08 | 2.24e-06 | 4.64e-02 | -4.430453 | 1.16e+02 | 1.12e+02 | 6.87e+00 | 6.82e+00 | 3.47e-02 | 3.35e-02 | 5.00e+00 | 2.00e+00 | 6.00e+00 | 2.58e+00 | 1.58e+00 | 2.81e+00 | 1.50e-03 | 5.98e-04 | 1.80e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr11 | 94408391 | 94474198 | ENSMUSG00000020866 | 0.5317 | - | Cacna1g | protein_coding | 1.29e-08 | 2.39e-06 | 3.88e-02 | -4.688250 | 1.35e+02 | 1.38e+02 | 7.09e+00 | 7.12e+00 | 1.63e-02 | 1.67e-02 | 6.00e+00 | 6.00e+00 | 1.00e+00 | 2.81e+00 | 2.81e+00 | 1.00e+00 | 7.25e-04 | 7.25e-04 | 1.21e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 63241537 | 63386030 | ENSMUSG00000027820 | 0.3846 | + | Mme | protein_coding | 1.32e-08 | 2.42e-06 | 3.76e-02 | -4.731804 | 3.80e+01 | 8.40e+01 | 5.29e+00 | 6.41e+00 | 3.87e-03 | 8.55e-03 | 1.00e+00 | 1.00e+00 | 2.00e+00 | 1.00e+00 | 1.00e+00 | 1.58e+00 | 1.02e-04 | 1.02e-04 | 2.03e-04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr12 | 72211752 | 72409054 | ENSMUSG00000021087 | 0.4375 | - | Rtn1 | protein_coding | 1.42e-08 | 2.58e-06 | 4.25e+01 | 5.410019 | 7.00e+00 | 0.00e+00 | 3.00e+00 | 0.00e+00 | 2.13e-03 | 0.00e+00 | 1.83e+02 | 1.15e+02 | 2.73e+02 | 7.52e+00 | 6.86e+00 | 8.10e+00 | 5.56e-02 | 3.49e-02 | 8.30e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 51660360 | 51682677 | ENSMUSG00000074604 | 0.4659 | + | Mgst2 | protein_coding | 1.44e-08 | 2.60e-06 | 3.77e-02 | -4.730942 | 2.91e+02 | 1.85e+02 | 8.19e+00 | 7.54e+00 | 7.30e-02 | 4.64e-02 | 9.00e+00 | 6.00e+00 | 9.00e+00 | 3.32e+00 | 2.81e+00 | 3.32e+00 | 2.26e-03 | 1.51e-03 | 2.26e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr2 | 80411970 | 80447625 | ENSMUSG00000027004 | 0.4146 | - | Frzb | protein_coding | 1.54e-08 | 2.75e-06 | 3.04e+01 | 4.926572 | 1.37e+02 | 1.15e+02 | 7.11e+00 | 6.86e+00 | 5.18e-02 | 4.35e-02 | 4.39e+03 | 4.76e+03 | 2.43e+03 | 1.21e+01 | 1.22e+01 | 1.12e+01 | 1.66e+00 | 1.80e+00 | 9.19e-01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 102144362 | 102149511 | ENSMUSG00000023046 | 0.5258 | + | Igfbp6 | protein_coding | 3.05e-08 | 5.36e-06 | 5.86e-02 | -4.092757 | 2.29e+02 | 3.15e+02 | 7.85e+00 | 8.30e+00 | 1.57e-01 | 2.15e-01 | 2.30e+01 | 7.00e+00 | 1.50e+01 | 4.58e+00 | 3.00e+00 | 4.00e+00 | 1.57e-02 | 4.78e-03 | 1.03e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr15 | 75108158 | 75111970 | ENSMUSG00000022584 | 0.4881 | - | Ly6c2 | protein_coding | 3.06e-08 | 5.36e-06 | 1.67e-02 | -5.906891 | 2.90e+01 | 8.90e+01 | 4.91e+00 | 6.49e+00 | 1.77e-02 | 5.43e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr3 | 54361109 | 54391037 | ENSMUSG00000027750 | 0.3811 | + | Postn | protein_coding | 3.09e-08 | 5.36e-06 | 8.09e-02 | -3.627848 | 4.44e+02 | 7.49e+02 | 8.80e+00 | 9.55e+00 | 1.37e-01 | 2.31e-01 | 3.60e+01 | 4.30e+01 | 6.30e+01 | 5.21e+00 | 5.46e+00 | 6.00e+00 | 1.11e-02 | 1.32e-02 | 1.94e-02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr7 | 27119909 | 27133660 | ENSMUSG00000052974 | 0.4776 | + | Cyp2f2 | protein_coding | 3.23e-08 | 5.55e-06 | 1.52e-02 | -6.044394 | 8.90e+01 | 4.10e+01 | 6.49e+00 | 5.39e+00 | 2.21e-02 | 1.02e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0.00e+00 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chr16 | 31296192 | 31314808 | ENSMUSG00000022548 | 0.4595 | - | Apod | protein_coding | 3.99e-08 | 6.80e-06 | 4.48e-02 | -4.479780 | 5.44e+02 | 1.68e+02 | 9.09e+00 | 7.40e+00 | 1.42e-01 | 4.39e-02 | 1.60e+01 | 2.10e+01 | 8.00e+00 | 4.09e+00 | 4.46e+00 | 3.17e+00 | 4.18e-03 | 5.48e-03 | 2.09e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | chrX | 136590842 | 136668378 | ENSMUSG00000044550 | 0.4029 | + | Tceal3 | protein_coding | 4.60e-08 | 7.77e-06 | 3.15e-02 | -4.987548 | 3.25e+02 | 9.60e+01 | 8.35e+00 | 6.60e+00 | 5.94e-02 | 1.75e-02 | 2.00e+00 | 3.00e+00 | 1.20e+01 | 1.58e+00 | 2.00e+00 | 3.70e+00 | 3.65e-04 | 5.48e-04 | 2.19e-03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Download the DEG result list for group4_vs_group8.Download the whole result list for group4_vs_group8.Download the raw read counts table for the experiment.Download the normalized read counts table for the experiment.
References
|
|
