samplename filename condition paired stranded GKR14 /data/images/proton/run212/tophat_013/sort_uniq.bam TZEROHOURS single yes GKR20 /data/images/proton/run209/tophat_001/sort_uniq.bam TZEROHOURS single yes GKR26 /data/images/proton/run200/tophat_007/sort_uniq.bam TZEROHOURS single yes GKR16 /data/images/proton/run212/tophat_015/sort_uniq.bam TTHREEHOURS single yes GKR22 /data/images/proton/run210/tophat_003/sort_uniq.bam TTHREEHOURS single yes GKR28 /data/images/proton/run202/tophat_009/sort_uniq.bam TTHREEHOURS single yes