samplename filename condition paired stranded GKR14 /data/images/proton/run212/tophat_013/sort_uniq.bam TZEROHOURS single yes GKR20 /data/images/proton/run209/tophat_001/sort_uniq.bam TZEROHOURS single yes GKR26 /data/images/proton/run200/tophat_007/sort_uniq.bam TZEROHOURS single yes GKR15 /data/images/proton/run213/tophat_014/sort_uniq.bam TONEHOUR single yes GKR21 /data/images/proton/run210/tophat_002/sort_uniq.bam TONEHOUR single yes GKR27 /data/images/proton/run200/tophat_008/sort_uniq.bam TONEHOUR single yes