/data/images/proton/tophat2stranded-sampled-triple-bigwig1.sh #smallest lib: 99750012 samplename filename condition paired stranded GKR14 /data/images/proton/run212/tophat_013/sort_uniq.bam TZEROHOURS 42153690 31570145 (74.9% of input) GKR20 /data/images/proton/run209/tophat_001/sort_uniq.bam TZEROHOURS 49563551 26412621 (53.3% of input) GKR26 /data/images/proton/run200/tophat_007/sort_uniq.bam TZEROHOURS 19027698 11906250 (62.6% of input) (/ 99750012.0 110744939) 0.9007184698526043 GKR15 /data/images/proton/run213/tophat_014/sort_uniq.bam TONEHOUR 42837783 19993014 (46.7% of input) GKR21 /data/images/proton/run210/tophat_002/sort_uniq.bam TONEHOUR 38259331 23634266 (61.8% of input) GKR27 /data/images/proton/run200/tophat_008/sort_uniq.bam TONEHOUR 18652898 12246354 (65.7% of input) (/ 99750012.0 99750012) 1.0 GKR16 /data/images/proton/run212/tophat_015/sort_uniq.bam TTHREEHOURS 49297107 34784664 (70.6% of input) GKR22 /data/images/proton/run210/tophat_003/sort_uniq.bam TTHREEHOURS 47025013 31494687 (67.0% of input) GKR28 /data/images/proton/run202/tophat_009/sort_uniq.bam TTHREEHOURS 18101311 9217782 (50.9% of input) (/ 99750012.0 114423431) 0.871762113128735 GKR17 /data/images/proton/run213/tophat_016/sort_uniq.bam TSIXHOURS 44040960 23731932 (53.9% of input) GKR23 /data/images/proton/run209/tophat_004/sort_uniq.bam TSIXHOURS 39551153 28387747 (71.8% of input) GKR29 /data/images/proton/run202/tophat_010/sort_uniq.bam TSIXHOURS 22417500 13225068 (59.0% of input) (/ 99750012.0 106009613) 0.9409525153157573 GKR18 /data/images/proton/run211/tophat_007/sort_uniq.bam TTWENTYFOURHOURS 44606143 23419573 (52.5% of input) GKR24 /data/images/proton/run208/tophat_005/sort_uniq.bam TTWENTYFOURHOURS 40219289 29265884 (72.8% of input) GKR30 /data/images/proton/run207/tophat_011/sort_uniq.bam TTWENTYFOURHOURS 43831192 26778140 (61.1% of input) (/ 99750012.0 128656624) 0.7753196757284724 GKR19 /data/images/proton/run211/tophat_008/sort_uniq.bam TSEVENDAYS 38310065 20291313 (53.0% of input) GKR25 /data/images/proton/run208/tophat_006/sort_uniq.bam TSEVENDAYS 52167745 36544550 (70.1% of input) GKR31 /data/images/proton/run207/tophat_012/sort_uniq.bam TSEVENDAYS 35960011 20432778 (56.8% of input) (/ 99750012.0 126437821) 0.7889254276218506