ln -s /data/images/proton/run213/tophat_014/sort_uniq.bam T1h.bam
ln -s /data/images/proton/run212/tophat_015/sort_uniq.bam T3h.bam
ln -s /data/images/proton/run213/tophat_016/sort_uniq.bam T6h.bam

/data/images/proton/tophat2stranded-sampled-triple-bigwig1.sh  T0h.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.9007184698526043 /data/images/proton/run209/tophat_001/sort_uniq.bam /data/images/proton/run200/tophat_007/sort_uniq.bam
/data/images/proton/tophat2stranded-sampled-triple-bigwig1.sh  T1h.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 1.0 /data/images/proton/run210/tophat_002/sort_uniq.bam /data/images/proton/run200/tophat_008/sort_uniq.bam
/data/images/proton/tophat2stranded-sampled-triple-bigwig1.sh  T3h.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.871762113128735 /data/images/proton/run210/tophat_003/sort_uniq.bam /data/images/proton/run202/tophat_009/sort_uniq.bam
/data/images/proton/tophat2stranded-sampled-triple-bigwig1.sh  T6h.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.9409525153157573 /data/images/proton/run209/tophat_004/sort_uniq.bam /data/images/proton/run202/tophat_010/sort_uniq.bam
/data/images/proton/tophat2stranded-sampled-triple-bigwig1.sh  T24h.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.7753196757284724 /data/images/proton/run208/tophat_005/sort_uniq.bam /data/images/proton/run207/tophat_011/sort_uniq.bam
/data/images/proton/tophat2stranded-sampled-triple-bigwig1.sh  T7d.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.7889254276218506 /data/images/proton/run208/tophat_006/sort_uniq.bam /data/images/proton/run207/tophat_012/sort_uniq.bam