#!/bin/bash
# Sampling to smallest library containing 18101311 reads
echo "28"
./tophat2stranded-sampled-pair-bigwig2.sh r202-GKR28-III3h.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.8699465603509272 r205-GKR28-III3h.bam
echo "29";date
./tophat2stranded-sampled-pair-bigwig2.sh r202-GKR29-III6h.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.6342979497997966 r205-GKR29-III6h.bam
echo "26";date
./tophat2stranded-sampled-pair-bigwig2.sh r200-GKR26-III0h.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 0.9778344743114775 r201-GKR26-III0h.bam
echo "27";date
#./tophat2stranded-sampled-pair-bigwig2.sh r200-GKR27-III1h.bam /data/results/reference/mmu/Mus_musculus/UCSC/mm9/Sequence/WholeGenomeFasta/mmu.mm9.genome 1 r201-GKR27-III1h.bam
date