samplename filename condition paired stranded EPI1 /data/images/proton/GKlab/Prados/run395/GK3R170-EPI1.bam EPI1_3_CTRL single yes EPI2 /data/images/proton/GKlab/Prados/run395/GK3R171-EPI2.bam EPI1_3_CTRL single yes EPI3 /data/images/proton/GKlab/Prados/run395/GK3R172-EPI3.bam EPI1_3_CTRL single yes EPI4 /data/images/proton/GKlab/Prados/run395/GK3R173-EPI4.bam EPI4_6_CRE single yes EPI5 /data/images/proton/GKlab/Prados/run395/GK3R174-EPI5.bam EPI4_6_CRE single yes EPI6 /data/images/proton/GKlab/Prados/run395/GK3R175-EPI6.bam EPI4_6_CRE single yes MCs1 /data/images/proton/GKlab/Prados/run395/GK3R182-MCs1.bam MC1_3_CTRL single yes MCs2 /data/images/proton/GKlab/Prados/run395/GK3R183-MCs2.bam MC1_3_CTRL single yes MCs3 /data/images/proton/GKlab/Prados/run395/GK3R184-MCs3.bam MC1_3_CTRL single yes MCs4 /data/images/proton/GKlab/Prados/run395/GK3R185-MCs4.bam MC4_6_CRE single yes MCs5 /data/images/proton/GKlab/Prados/run395/GK3R186-MCs5.bam MC4_6_CRE single yes MCs6 /data/images/proton/GKlab/Prados/run395/GK3R187-MCs6.bam MC4_6_CRE single yes