metaseqR report

Summary

Analysis summary

Summary: The gene counts table was normalized for inherent systematic or experimental biases (e.g. sequencing depth, gene length, GC content bias etc.) using the Bioconductor package DESeq after removing genes that had zero counts over all the RNA-Seq samples (19293 genes). The output of the normalization algorithm was a table with normalized counts, which can be used for differential expression analysis with statistical algorithms developed specifically for count data. Prior to the statistical testing procedure, the gene read counts were filtered for possible artifacts that could affect the subsequent statistical testing procedures. Genes presenting any of the following were excluded from further analysis: i) genes with length less than 500 (5041 genes), ii) genes whose average reads per 100 bp was less than the 25^th quantile of the total normalized distribution of average reads per 100bp (0 genes with cutoff value 0 average reads per 100 bp), iii) genes with read counts below the median read counts of the total normalized count distribution (9627 genes with cutoff value 3 normalized read counts). The total number of genes excluded due to the application of gene filters was 5187. The total (unified) number of genes excluded due to the application of all filters was 31377. The resulting gene counts table was subjected to differential expression analysis for the contrasts ML versus MU, CL versus CU, ML versus CL, MI versus CI, ML versus MI, CL versus CI, MU versus CU using the Bioconductor package DESeq. The final numbers of differentially expressed genes were (per contrast): for the contrast ML versus MU, 1994 (1005) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 416 (71) were up-regulated, 1578 (934) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log₂ scale, for the contrast CL versus CU, 2208 (1099) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 778 (253) were up-regulated, 1430 (846) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log₂ scale, for the contrast ML versus CL, 287 (25) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 69 (2) were up-regulated, 218 (23) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log₂ scale, for the contrast MI versus CI, 1019 (189) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 671 (160) were up-regulated, 348 (29) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log₂ scale, for the contrast ML versus MI, 2199 (1029) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 588 (113) were up-regulated, 1611 (916) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log₂ scale, for the contrast CL versus CI, 2183 (1032) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 860 (254) were up-regulated, 1323 (778) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log₂ scale, for the contrast MU versus CU, 552 (133) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 491 (131) were up-regulated, 61 (2) were down-regulated and 0 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log₂ scale. Literature references for all the algorithms used can be found at the end of this report.

Input options

Read counts file: imported custom data frame
Conditions: MU, MI, CU, CI, CL, ML
Samples included: GK3R140_MU1, GK3R141_MU2, GK3R142_MU3, GK3R143_MI1, GK3R144_MI2, GK3R145_MI3, GK3R146_CU1, GK3R147_CU2, GK3R148_CU3, GK3R149_CI1, GK3R150_CI2, GK3R151_CI3r, GK3R164-CL1, GK3R165-CL2, GK3R166-CL3, GK3R167-ML1, GK3R168-ML2, GK3R169-ML3
Samples excluded: none
Requested contrasts: ML_vs_MU, CL_vs_CU, ML_vs_CL, MI_vs_CI, ML_vs_MI, CL_vs_CI, MU_vs_CU
Library sizes: not available
Annotation: embedded
Organism:
Annotation source: Ensembl genomes
Count type: utr
Exon filters: none applied
Gene filters: length, avg.reads, expression, biotype

length
- length: 500

avg.reads
- average.per.bp: 100
- quantile: 0.25

expression
- median: TRUE
- mean: FALSE
- quantile: NA
- known: NA
- custom: NA

biotype
- pseudogene: FALSE
- snRNA: FALSE
- protein_coding: FALSE
- antisense: FALSE
- miRNA: FALSE
- snoRNA: FALSE
- lincRNA: FALSE
- processed_transcript: FALSE
- misc_RNA: FALSE
- rRNA: TRUE
- sense_intronic: FALSE
- sense_overlapping: FALSE
- polymorphic_pseudogene: FALSE
- IG_C_gene: FALSE
- IG_J_gene: FALSE
- IG_D_gene: FALSE
- IG_LV_gene: FALSE
- IG_V_gene: FALSE
- IG_V_pseudogene: TRUE
- TR_V_gene: FALSE
- TR_V_pseudogene: TRUE
- three_prime_overlapping_ncrna: FALSE

Filter application: after normalization
Normalization algorithm: DESeq
Normalization arguments: locfunc

[[list(locfunc = function (x, na.rm = FALSE) standardGeneric("median"))locfunc

Statistical algorithm(s): DESeq
Statistical arguments for DESeq: method, sharingMode, fitType

method: blind
sharingMode: fit-only
fitType: local

Meta-analysis method: no meta-analysis, reported p-values from the first supplied statistical algorithm
Multiple testing correction: Benjamini-Hochberg FDR
p-value threshold: 0.05
Logarithmic tranformation offset: 1
Analysis preset: not available
Quality control plots: multidimensional scaling, biotype detection, biotype counts, sample and biotype saturation, filtered biotypes, correlation heatmap and correlogram, pairwise scatterplots between samples, boxplots, GC-content bias, transcript length bias, mean-difference plot, mean-variance plot, DEG biotype detection, volcano plot, DEG heatmap
Figure format: png, pdf
Output directory: /data/images/proton/GKlab/Kolliaraki/run386_run394/metaseqr_quantseq_run386_run394
Output data: Annotation, p-value, Adjusted p-value (FDR), Fold change, Statistics, Read counts
Output scale(s): log2 scale, Reads per Gene Model
Output values: Normalized values
Output statistics: Mean
Total run time: 30 minutes 06 seconds

Filtered genes

Number of filtered genes: 31377 which is the union of

Filtered because of zero reads: 19293
Filtered because of exon filters: 0
Filtered because of gene filters: 12084 which is the union of
- length: 5041 genes with filter cutoff value 500
- avg.reads: 0 genes with filter cutoff value 0
- expression: 9627 genes further decomposed to (filter name, filtered genes, filter cutoff):
- - median: 9627 genes with filter cutoff value 3
- biotype: 145 genes with filter cutoff value rRNA, IG_V_pseudogene, TR_V_pseudogene

Differentially expressed genes

Number of differentially expressed genes per contrast:

ML_vs_MU: 1994 (1005) statistically significant genes of which 416 (71) up regulated, 1578 (934) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log₂ scale.
CL_vs_CU: 2208 (1099) statistically significant genes of which 778 (253) up regulated, 1430 (846) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log₂ scale.
ML_vs_CL: 287 (25) statistically significant genes of which 69 (2) up regulated, 218 (23) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log₂ scale.
MI_vs_CI: 1019 (189) statistically significant genes of which 671 (160) up regulated, 348 (29) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log₂ scale.
ML_vs_MI: 2199 (1029) statistically significant genes of which 588 (113) up regulated, 1611 (916) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log₂ scale.
CL_vs_CI: 2183 (1032) statistically significant genes of which 860 (254) up regulated, 1323 (778) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log₂ scale.
MU_vs_CU: 552 (133) statistically significant genes of which 491 (131) up regulated, 61 (2) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log₂ scale.

Run log

[ 2018-05-08 11:03:20 ] INFO 2018-05-08 11:03:20: Data processing started...
[ 2018-05-08 11:03:20 ] INFO Read counts file: imported custom data frame
[ 2018-05-08 11:03:20 ] INFO Conditions: MU, MI, CU, CI, CL, ML
[ 2018-05-08 11:03:20 ] INFO Samples to include: GK3R140_MU1, GK3R141_MU2, GK3R142_MU3, GK3R143_MI1, GK3R144_MI2, GK3R145_MI3, GK3R146_CU1, GK3R147_CU2, GK3R148_CU3, GK3R149_CI1, GK3R150_CI2, GK3R151_CI3r, GK3R164-CL1, GK3R165-CL2, GK3R166-CL3, GK3R167-ML1, GK3R168-ML2, GK3R169-ML3
[ 2018-05-08 11:03:20 ] INFO Samples to exclude: none
[ 2018-05-08 11:03:20 ] INFO Requested contrasts: ML_vs_MU, CL_vs_CU, ML_vs_CL, MI_vs_CI, ML_vs_MI, CL_vs_CI, MU_vs_CU
[ 2018-05-08 11:03:20 ] INFO Annotation: embedded
[ 2018-05-08 11:03:20 ] INFO Organism: custom
[ 2018-05-08 11:03:20 ] INFO Reference source: ensembl
[ 2018-05-08 11:03:20 ] INFO Count type: utr
[ 2018-05-08 11:03:20 ] INFO Exon filters: none applied
[ 2018-05-08 11:03:20 ] INFO Gene filters: length, avg.reads, expression, biotype
[ 2018-05-08 11:03:20 ] INFO length:
[ 2018-05-08 11:03:20 ] INFO length: 500
[ 2018-05-08 11:03:20 ] INFO avg.reads:
[ 2018-05-08 11:03:20 ] INFO average.per.bp: 100
[ 2018-05-08 11:03:20 ] INFO quantile: 0.25
[ 2018-05-08 11:03:20 ] INFO expression:
[ 2018-05-08 11:03:20 ] INFO median: TRUE
[ 2018-05-08 11:03:20 ] INFO mean: FALSE
[ 2018-05-08 11:03:20 ] INFO quantile: NA
[ 2018-05-08 11:03:20 ] INFO known: NA
[ 2018-05-08 11:03:20 ] INFO custom: NA
[ 2018-05-08 11:03:20 ] INFO biotype:
[ 2018-05-08 11:03:20 ] INFO pseudogene: FALSE
[ 2018-05-08 11:03:20 ] INFO snRNA: FALSE
[ 2018-05-08 11:03:20 ] INFO protein_coding: FALSE
[ 2018-05-08 11:03:20 ] INFO antisense: FALSE
[ 2018-05-08 11:03:20 ] INFO miRNA: FALSE
[ 2018-05-08 11:03:20 ] INFO snoRNA: FALSE
[ 2018-05-08 11:03:20 ] INFO lincRNA: FALSE
[ 2018-05-08 11:03:20 ] INFO processed_transcript: FALSE
[ 2018-05-08 11:03:20 ] INFO misc_RNA: FALSE
[ 2018-05-08 11:03:20 ] INFO rRNA: TRUE
[ 2018-05-08 11:03:20 ] INFO sense_intronic: FALSE
[ 2018-05-08 11:03:20 ] INFO sense_overlapping: FALSE
[ 2018-05-08 11:03:20 ] INFO polymorphic_pseudogene: FALSE
[ 2018-05-08 11:03:20 ] INFO IG_C_gene: FALSE
[ 2018-05-08 11:03:20 ] INFO IG_J_gene: FALSE
[ 2018-05-08 11:03:20 ] INFO IG_D_gene: FALSE
[ 2018-05-08 11:03:20 ] INFO IG_LV_gene: FALSE
[ 2018-05-08 11:03:20 ] INFO IG_V_gene: FALSE
[ 2018-05-08 11:03:20 ] INFO IG_V_pseudogene: TRUE
[ 2018-05-08 11:03:20 ] INFO TR_V_gene: FALSE
[ 2018-05-08 11:03:20 ] INFO TR_V_pseudogene: TRUE
[ 2018-05-08 11:03:20 ] INFO three_prime_overlapping_ncrna: FALSE
[ 2018-05-08 11:03:20 ] INFO Filter application: postnorm
[ 2018-05-08 11:03:20 ] INFO Normalization algorithm: deseq
[ 2018-05-08 11:03:20 ] INFO Normalization arguments:
[ 2018-05-08 11:03:20 ] INFO locfunc:
[ 2018-05-08 11:03:20 ] INFO [[
[ 2018-05-08 11:03:20 ] INFO list(locfunc = function (x, na.rm = FALSE) standardGeneric("median"))
[ 2018-05-08 11:03:20 ] INFO locfunc
[ 2018-05-08 11:03:20 ] INFO Statistical algorithm: deseq
[ 2018-05-08 11:03:20 ] INFO Statistical arguments:
[ 2018-05-08 11:03:20 ] INFO deseq: blind, fit-only, local
[ 2018-05-08 11:03:20 ] INFO Meta-analysis method: none
[ 2018-05-08 11:03:20 ] INFO Multiple testing correction: BH
[ 2018-05-08 11:03:20 ] INFO p-value threshold: 0.05
[ 2018-05-08 11:03:20 ] INFO Logarithmic transformation offset: 1
[ 2018-05-08 11:03:20 ] INFO Quality control plots: mds, biodetection, countsbio, saturation, readnoise, filtered, correl, pairwise, boxplot, gcbias, lengthbias, meandiff, meanvar, biodist, volcano, deheatmap
[ 2018-05-08 11:03:20 ] INFO Figure format: png, pdf
[ 2018-05-08 11:03:20 ] INFO Output directory: /data/images/proton/GKlab/Kolliaraki/run386_run394/metaseqr_quantseq_run386_run394
[ 2018-05-08 11:03:20 ] INFO Output data: annotation, p.value, adj.p.value, fold.change, stats, counts, flags
[ 2018-05-08 11:03:20 ] INFO Output scale(s): log2, rpgm
[ 2018-05-08 11:03:20 ] INFO Output values: normalized
[ 2018-05-08 11:03:20 ] INFO Output statistics: mean
[ 2018-05-08 11:03:20 ] INFO Reading custom external gene annotation for from /data/results/tools/rnaseq/metaseqr/mm10/gene_data_mm10.txt.gz...
[ 2018-05-08 11:03:22 ] INFO Checking chromosomes in transcript counts and gene annotation...
[ 2018-05-08 11:03:22 ] INFO Processing transcripts...
[ 2018-05-08 11:03:22 ] INFO Separating transcripts (UTR regions) per gene for GK3R140_MU1...
[ 2018-05-08 11:03:39 ] INFO Separating transcripts (UTR regions) per gene for GK3R141_MU2...
[ 2018-05-08 11:03:57 ] INFO Separating transcripts (UTR regions) per gene for GK3R142_MU3...
[ 2018-05-08 11:04:15 ] INFO Separating transcripts (UTR regions) per gene for GK3R143_MI1...
[ 2018-05-08 11:04:32 ] INFO Separating transcripts (UTR regions) per gene for GK3R144_MI2...
[ 2018-05-08 11:04:51 ] INFO Separating transcripts (UTR regions) per gene for GK3R145_MI3...
[ 2018-05-08 11:05:09 ] INFO Separating transcripts (UTR regions) per gene for GK3R146_CU1...
[ 2018-05-08 11:05:27 ] INFO Separating transcripts (UTR regions) per gene for GK3R147_CU2...
[ 2018-05-08 11:05:59 ] INFO Separating transcripts (UTR regions) per gene for GK3R148_CU3...
[ 2018-05-08 11:06:30 ] INFO Separating transcripts (UTR regions) per gene for GK3R149_CI1...
[ 2018-05-08 11:07:00 ] INFO Separating transcripts (UTR regions) per gene for GK3R150_CI2...
[ 2018-05-08 11:07:31 ] INFO Separating transcripts (UTR regions) per gene for GK3R151_CI3r...
[ 2018-05-08 11:08:00 ] INFO Separating transcripts (UTR regions) per gene for GK3R164-CL1...
[ 2018-05-08 11:08:31 ] INFO Separating transcripts (UTR regions) per gene for GK3R165-CL2...
[ 2018-05-08 11:09:02 ] INFO Separating transcripts (UTR regions) per gene for GK3R166-CL3...
[ 2018-05-08 11:09:29 ] INFO Separating transcripts (UTR regions) per gene for GK3R167-ML1...
[ 2018-05-08 11:09:57 ] INFO Separating transcripts (UTR regions) per gene for GK3R168-ML2...
[ 2018-05-08 11:10:24 ] INFO Separating transcripts (UTR regions) per gene for GK3R169-ML3...
[ 2018-05-08 11:10:50 ] INFO Saving gene model to /data/images/proton/GKlab/Kolliaraki/run386_run394/metaseqr_quantseq_run386_run394/data/gene_model.RData
[ 2018-05-08 11:10:55 ] INFO Summarizing count data...
[ 2018-05-08 11:12:14 ] INFO Removing genes with zero counts in all samples...
[ 2018-05-08 11:12:15 ] INFO Normalizing with: deseq
[ 2018-05-08 11:12:15 ] INFO Applying gene filter length...
[ 2018-05-08 11:12:15 ] INFO Threshold below which ignored: 500
[ 2018-05-08 11:12:15 ] INFO Applying gene filter avg.reads...
[ 2018-05-08 11:12:15 ] INFO Threshold below which ignored: 0
[ 2018-05-08 11:12:15 ] INFO Applying gene filter expression...
[ 2018-05-08 11:12:15 ] INFO Threshold below which ignored: 3
[ 2018-05-08 11:12:15 ] INFO Applying gene filter biotype...
[ 2018-05-08 11:12:15 ] INFO Biotypes ignored: rRNA, IG_V_pseudogene, TR_V_pseudogene
[ 2018-05-08 11:12:15 ] INFO 31377 genes filtered out
[ 2018-05-08 11:12:15 ] INFO 18171 genes remain after filtering
[ 2018-05-08 11:12:15 ] INFO Running statistical tests with: deseq
[ 2018-05-08 11:12:16 ] INFO Contrast: ML_vs_MU
[ 2018-05-08 11:12:31 ] INFO Contrast: CL_vs_CU
[ 2018-05-08 11:12:47 ] INFO Contrast: ML_vs_CL
[ 2018-05-08 11:13:04 ] INFO Contrast: MI_vs_CI
[ 2018-05-08 11:13:15 ] INFO Contrast: ML_vs_MI
[ 2018-05-08 11:13:30 ] INFO Contrast: CL_vs_CI
[ 2018-05-08 11:13:44 ] INFO Contrast: MU_vs_CU
[ 2018-05-08 11:13:59 ] INFO Contrast ML_vs_MU: found 1994 genes
[ 2018-05-08 11:13:59 ] INFO Contrast CL_vs_CU: found 2208 genes
[ 2018-05-08 11:13:59 ] INFO Contrast ML_vs_CL: found 287 genes
[ 2018-05-08 11:13:59 ] INFO Contrast MI_vs_CI: found 1019 genes
[ 2018-05-08 11:13:59 ] INFO Contrast ML_vs_MI: found 2199 genes
[ 2018-05-08 11:13:59 ] INFO Contrast CL_vs_CI: found 2183 genes
[ 2018-05-08 11:13:59 ] INFO Contrast MU_vs_CU: found 552 genes
[ 2018-05-08 11:13:59 ] INFO Building output files...
[ 2018-05-08 11:14:01 ] INFO Contrast: ML_vs_MU
[ 2018-05-08 11:14:01 ] INFO Adding non-filtered data...
[ 2018-05-08 11:14:01 ] INFO binding annotation...
[ 2018-05-08 11:14:02 ] INFO binding p-values...
[ 2018-05-08 11:14:02 ] INFO binding FDRs...
[ 2018-05-08 11:14:03 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:03 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:03 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:04 ] INFO binding all normalized counts for ML...
[ 2018-05-08 11:14:05 ] INFO binding all normalized counts for MU...
[ 2018-05-08 11:14:05 ] INFO binding filtering flags...
[ 2018-05-08 11:14:06 ] INFO Writing output...
[ 2018-05-08 11:14:06 ] INFO Adding filtered data...
[ 2018-05-08 11:14:06 ] INFO binding annotation...
[ 2018-05-08 11:14:06 ] INFO binding p-values...
[ 2018-05-08 11:14:06 ] INFO binding FDRs...
[ 2018-05-08 11:14:07 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:07 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:08 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:08 ] INFO binding all normalized counts for ML...
[ 2018-05-08 11:14:08 ] INFO binding all normalized counts for MU...
[ 2018-05-08 11:14:08 ] INFO binding filtering flags...
[ 2018-05-08 11:14:09 ] INFO Writing output...
[ 2018-05-08 11:14:11 ] INFO Contrast: CL_vs_CU
[ 2018-05-08 11:14:11 ] INFO Adding non-filtered data...
[ 2018-05-08 11:14:11 ] INFO binding annotation...
[ 2018-05-08 11:14:12 ] INFO binding p-values...
[ 2018-05-08 11:14:12 ] INFO binding FDRs...
[ 2018-05-08 11:14:12 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:12 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:13 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:14 ] INFO binding all normalized counts for CL...
[ 2018-05-08 11:14:14 ] INFO binding all normalized counts for CU...
[ 2018-05-08 11:14:15 ] INFO binding filtering flags...
[ 2018-05-08 11:14:16 ] INFO Writing output...
[ 2018-05-08 11:14:16 ] INFO Adding filtered data...
[ 2018-05-08 11:14:16 ] INFO binding annotation...
[ 2018-05-08 11:14:16 ] INFO binding p-values...
[ 2018-05-08 11:14:16 ] INFO binding FDRs...
[ 2018-05-08 11:14:17 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:17 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:17 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:18 ] INFO binding all normalized counts for CL...
[ 2018-05-08 11:14:18 ] INFO binding all normalized counts for CU...
[ 2018-05-08 11:14:18 ] INFO binding filtering flags...
[ 2018-05-08 11:14:19 ] INFO Writing output...
[ 2018-05-08 11:14:21 ] INFO Contrast: ML_vs_CL
[ 2018-05-08 11:14:21 ] INFO Adding non-filtered data...
[ 2018-05-08 11:14:21 ] INFO binding annotation...
[ 2018-05-08 11:14:22 ] INFO binding p-values...
[ 2018-05-08 11:14:22 ] INFO binding FDRs...
[ 2018-05-08 11:14:22 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:22 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:23 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:23 ] INFO binding all normalized counts for ML...
[ 2018-05-08 11:14:24 ] INFO binding all normalized counts for CL...
[ 2018-05-08 11:14:25 ] INFO binding filtering flags...
[ 2018-05-08 11:14:26 ] INFO Writing output...
[ 2018-05-08 11:14:26 ] INFO Adding filtered data...
[ 2018-05-08 11:14:26 ] INFO binding annotation...
[ 2018-05-08 11:14:26 ] INFO binding p-values...
[ 2018-05-08 11:14:26 ] INFO binding FDRs...
[ 2018-05-08 11:14:26 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:26 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:27 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:27 ] INFO binding all normalized counts for ML...
[ 2018-05-08 11:14:27 ] INFO binding all normalized counts for CL...
[ 2018-05-08 11:14:27 ] INFO binding filtering flags...
[ 2018-05-08 11:14:28 ] INFO Writing output...
[ 2018-05-08 11:14:30 ] INFO Contrast: MI_vs_CI
[ 2018-05-08 11:14:30 ] INFO Adding non-filtered data...
[ 2018-05-08 11:14:30 ] INFO binding annotation...
[ 2018-05-08 11:14:31 ] INFO binding p-values...
[ 2018-05-08 11:14:31 ] INFO binding FDRs...
[ 2018-05-08 11:14:32 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:32 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:32 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:33 ] INFO binding all normalized counts for MI...
[ 2018-05-08 11:14:34 ] INFO binding all normalized counts for CI...
[ 2018-05-08 11:14:34 ] INFO binding filtering flags...
[ 2018-05-08 11:14:35 ] INFO Writing output...
[ 2018-05-08 11:14:35 ] INFO Adding filtered data...
[ 2018-05-08 11:14:35 ] INFO binding annotation...
[ 2018-05-08 11:14:35 ] INFO binding p-values...
[ 2018-05-08 11:14:35 ] INFO binding FDRs...
[ 2018-05-08 11:14:36 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:36 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:36 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:37 ] INFO binding all normalized counts for MI...
[ 2018-05-08 11:14:37 ] INFO binding all normalized counts for CI...
[ 2018-05-08 11:14:37 ] INFO binding filtering flags...
[ 2018-05-08 11:14:38 ] INFO Writing output...
[ 2018-05-08 11:14:40 ] INFO Contrast: ML_vs_MI
[ 2018-05-08 11:14:40 ] INFO Adding non-filtered data...
[ 2018-05-08 11:14:40 ] INFO binding annotation...
[ 2018-05-08 11:14:41 ] INFO binding p-values...
[ 2018-05-08 11:14:41 ] INFO binding FDRs...
[ 2018-05-08 11:14:41 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:42 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:42 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:43 ] INFO binding all normalized counts for ML...
[ 2018-05-08 11:14:44 ] INFO binding all normalized counts for MI...
[ 2018-05-08 11:14:44 ] INFO binding filtering flags...
[ 2018-05-08 11:14:45 ] INFO Writing output...
[ 2018-05-08 11:14:45 ] INFO Adding filtered data...
[ 2018-05-08 11:14:45 ] INFO binding annotation...
[ 2018-05-08 11:14:45 ] INFO binding p-values...
[ 2018-05-08 11:14:45 ] INFO binding FDRs...
[ 2018-05-08 11:14:46 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:46 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:47 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:47 ] INFO binding all normalized counts for ML...
[ 2018-05-08 11:14:47 ] INFO binding all normalized counts for MI...
[ 2018-05-08 11:14:47 ] INFO binding filtering flags...
[ 2018-05-08 11:14:48 ] INFO Writing output...
[ 2018-05-08 11:14:50 ] INFO Contrast: CL_vs_CI
[ 2018-05-08 11:14:50 ] INFO Adding non-filtered data...
[ 2018-05-08 11:14:50 ] INFO binding annotation...
[ 2018-05-08 11:14:51 ] INFO binding p-values...
[ 2018-05-08 11:14:51 ] INFO binding FDRs...
[ 2018-05-08 11:14:52 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:52 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:52 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:53 ] INFO binding all normalized counts for CL...
[ 2018-05-08 11:14:54 ] INFO binding all normalized counts for CI...
[ 2018-05-08 11:14:54 ] INFO binding filtering flags...
[ 2018-05-08 11:14:55 ] INFO Writing output...
[ 2018-05-08 11:14:55 ] INFO Adding filtered data...
[ 2018-05-08 11:14:55 ] INFO binding annotation...
[ 2018-05-08 11:14:55 ] INFO binding p-values...
[ 2018-05-08 11:14:55 ] INFO binding FDRs...
[ 2018-05-08 11:14:56 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:14:56 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:57 ] INFO binding normalized mean counts...
[ 2018-05-08 11:14:57 ] INFO binding all normalized counts for CL...
[ 2018-05-08 11:14:57 ] INFO binding all normalized counts for CI...
[ 2018-05-08 11:14:57 ] INFO binding filtering flags...
[ 2018-05-08 11:14:58 ] INFO Writing output...
[ 2018-05-08 11:15:00 ] INFO Contrast: MU_vs_CU
[ 2018-05-08 11:15:00 ] INFO Adding non-filtered data...
[ 2018-05-08 11:15:00 ] INFO binding annotation...
[ 2018-05-08 11:15:01 ] INFO binding p-values...
[ 2018-05-08 11:15:01 ] INFO binding FDRs...
[ 2018-05-08 11:15:02 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:15:02 ] INFO binding normalized mean counts...
[ 2018-05-08 11:15:02 ] INFO binding normalized mean counts...
[ 2018-05-08 11:15:03 ] INFO binding all normalized counts for MU...
[ 2018-05-08 11:15:04 ] INFO binding all normalized counts for CU...
[ 2018-05-08 11:15:05 ] INFO binding filtering flags...
[ 2018-05-08 11:15:06 ] INFO Writing output...
[ 2018-05-08 11:15:06 ] INFO Adding filtered data...
[ 2018-05-08 11:15:06 ] INFO binding annotation...
[ 2018-05-08 11:15:06 ] INFO binding p-values...
[ 2018-05-08 11:15:06 ] INFO binding FDRs...
[ 2018-05-08 11:15:06 ] INFO binding log2 normalized fold changes...
[ 2018-05-08 11:15:06 ] INFO binding normalized mean counts...
[ 2018-05-08 11:15:07 ] INFO binding normalized mean counts...
[ 2018-05-08 11:15:08 ] INFO binding all normalized counts for MU...
[ 2018-05-08 11:15:08 ] INFO binding all normalized counts for CU...
[ 2018-05-08 11:15:08 ] INFO binding filtering flags...
[ 2018-05-08 11:15:09 ] INFO Writing output...
[ 2018-05-08 11:15:11 ] INFO Creating quality control graphs...
[ 2018-05-08 11:15:11 ] INFO Plotting in png format...
[ 2018-05-08 11:15:11 ] INFO Plotting mds...
[ 2018-05-08 11:15:11 ] INFO Plotting biodetection...
[ 2018-05-08 11:15:14 ] INFO Plotting countsbio...
[ 2018-05-08 11:15:17 ] INFO Plotting saturation...
[ 2018-05-08 11:15:31 ] INFO Plotting readnoise...
[ 2018-05-08 11:15:40 ] INFO Plotting correl...
[ 2018-05-08 11:15:40 ] INFO Plotting pairwise...
[ 2018-05-08 11:17:56 ] INFO Plotting boxplot...
[ 2018-05-08 11:17:56 ] INFO Plotting gcbias...
[ 2018-05-08 11:17:58 ] INFO Plotting lengthbias...
[ 2018-05-08 11:18:00 ] INFO Plotting meandiff...
[ 2018-05-08 11:18:03 ] INFO Plotting meanvar...
[ 2018-05-08 11:18:29 ] INFO Plotting boxplot...
[ 2018-05-08 11:18:29 ] INFO Plotting gcbias...
[ 2018-05-08 11:18:31 ] INFO Plotting lengthbias...
[ 2018-05-08 11:18:33 ] INFO Plotting meandiff...
[ 2018-05-08 11:18:36 ] INFO Plotting meanvar...
[ 2018-05-08 11:19:02 ] INFO Plotting biodist...
[ 2018-05-08 11:19:02 ] INFO Contrast: ML_vs_MU
[ 2018-05-08 11:19:02 ] INFO Contrast: CL_vs_CU
[ 2018-05-08 11:19:03 ] INFO Contrast: ML_vs_CL
[ 2018-05-08 11:19:03 ] INFO Contrast: MI_vs_CI
[ 2018-05-08 11:19:03 ] INFO Contrast: ML_vs_MI
[ 2018-05-08 11:19:04 ] INFO Contrast: CL_vs_CI
[ 2018-05-08 11:19:04 ] INFO Contrast: MU_vs_CU
[ 2018-05-08 11:19:04 ] INFO Plotting volcano...
[ 2018-05-08 11:19:04 ] INFO Contrast: ML_vs_MU
[ 2018-05-08 11:19:05 ] INFO Contrast: CL_vs_CU
[ 2018-05-08 11:19:06 ] INFO Contrast: ML_vs_CL
[ 2018-05-08 11:19:06 ] INFO Contrast: MI_vs_CI
[ 2018-05-08 11:19:07 ] INFO Contrast: ML_vs_MI
[ 2018-05-08 11:19:08 ] INFO Contrast: CL_vs_CI
[ 2018-05-08 11:19:08 ] INFO Contrast: MU_vs_CU
[ 2018-05-08 11:19:09 ] INFO Plotting deheatmap...
[ 2018-05-08 11:19:09 ] INFO Contrast: ML_vs_MU
[ 2018-05-08 11:19:59 ] INFO Contrast: CL_vs_CU
[ 2018-05-08 11:20:49 ] INFO Contrast: ML_vs_CL
[ 2018-05-08 11:21:38 ] INFO Contrast: MI_vs_CI
[ 2018-05-08 11:22:26 ] INFO Contrast: ML_vs_MI
[ 2018-05-08 11:23:17 ] INFO Contrast: CL_vs_CI
[ 2018-05-08 11:24:05 ] INFO Contrast: MU_vs_CU
[ 2018-05-08 11:24:56 ] INFO Plotting filtered...
[ 2018-05-08 11:24:56 ] INFO Plotting in pdf format...
[ 2018-05-08 11:24:56 ] INFO Plotting mds...
[ 2018-05-08 11:24:56 ] INFO Plotting biodetection...
[ 2018-05-08 11:24:57 ] INFO Plotting countsbio...
[ 2018-05-08 11:25:00 ] INFO Plotting saturation...
[ 2018-05-08 11:25:13 ] INFO Plotting readnoise...
[ 2018-05-08 11:25:21 ] INFO Plotting correl...
[ 2018-05-08 11:25:21 ] INFO Plotting pairwise...
[ 2018-05-08 11:26:30 ] INFO Plotting boxplot...
[ 2018-05-08 11:26:30 ] INFO Plotting gcbias...
[ 2018-05-08 11:26:33 ] INFO Plotting lengthbias...
[ 2018-05-08 11:26:35 ] INFO Plotting meandiff...
[ 2018-05-08 11:26:39 ] INFO Plotting meanvar...
[ 2018-05-08 11:27:03 ] INFO Plotting boxplot...
[ 2018-05-08 11:27:03 ] INFO Plotting gcbias...
[ 2018-05-08 11:27:06 ] INFO Plotting lengthbias...
[ 2018-05-08 11:27:08 ] INFO Plotting meandiff...
[ 2018-05-08 11:27:12 ] INFO Plotting meanvar...
[ 2018-05-08 11:27:38 ] INFO Plotting biodist...
[ 2018-05-08 11:27:38 ] INFO Contrast: ML_vs_MU
[ 2018-05-08 11:27:38 ] INFO Contrast: CL_vs_CU
[ 2018-05-08 11:27:38 ] INFO Contrast: ML_vs_CL
[ 2018-05-08 11:27:38 ] INFO Contrast: MI_vs_CI
[ 2018-05-08 11:27:38 ] INFO Contrast: ML_vs_MI
[ 2018-05-08 11:27:39 ] INFO Contrast: CL_vs_CI
[ 2018-05-08 11:27:39 ] INFO Contrast: MU_vs_CU
[ 2018-05-08 11:27:39 ] INFO Plotting volcano...
[ 2018-05-08 11:27:39 ] INFO Contrast: ML_vs_MU
[ 2018-05-08 11:27:39 ] INFO Contrast: CL_vs_CU
[ 2018-05-08 11:27:40 ] INFO Contrast: ML_vs_CL
[ 2018-05-08 11:27:40 ] INFO Contrast: MI_vs_CI
[ 2018-05-08 11:27:40 ] INFO Contrast: ML_vs_MI
[ 2018-05-08 11:27:41 ] INFO Contrast: CL_vs_CI
[ 2018-05-08 11:27:41 ] INFO Contrast: MU_vs_CU
[ 2018-05-08 11:27:42 ] INFO Plotting deheatmap...
[ 2018-05-08 11:27:42 ] INFO Contrast: ML_vs_MU
[ 2018-05-08 11:28:29 ] INFO Contrast: CL_vs_CU
[ 2018-05-08 11:29:18 ] INFO Contrast: ML_vs_CL
[ 2018-05-08 11:30:09 ] INFO Contrast: MI_vs_CI
[ 2018-05-08 11:30:56 ] INFO Contrast: ML_vs_MI
[ 2018-05-08 11:31:45 ] INFO Contrast: CL_vs_CI
[ 2018-05-08 11:32:32 ] INFO Contrast: MU_vs_CU
[ 2018-05-08 11:33:24 ] INFO Plotting filtered...
[ 2018-05-08 11:33:24 ] INFO Creating HTML report...
[ 2018-05-08 11:33:24 ] INFO Compressing figures...

Figures

Multidimensional scaling

The Multi-Dimensional Scaling (MDS) plots comprise a means of visualizing the level of similarity of individual cases of a dataset. It is similar to Principal Component Analysis (PCA), but instead of using the covariance matrix to find similarities among cases, MDS uses absolute distance metrics such as the classical Euclidean distance. Because of the relative linear relations among sequencing samples, it provides a more realistic clustering among samples. MDS serves quality control and it can be interpreted as follows: when the distance among samples of the same biological condition in the MDS space is small, this is an indication of high correlation and reproducibility among them. When this distance is larger or heterogeneous (e.g. the 3rd sample of a triplicate set is further from the other 2), this constitutes an indication of low correlation and reproducibility among samples. It can help exclude poor samples from further analysis.

Biotype detection

The biotype detection bar diagrams are a set of quality control charts that show the percentage of each biotype in the genome (i.e. in the whole set of features provided, for example, protein coding genes, non coding RNAs or pseudogenes) in grey bars, which proportion has been detected in a sample before normalization and after a basic filtering by removing features with zero counts in red lined bars, and the percentage of each biotype within the sample in solid red bars. The difference between grey bars and solid red bars is that the grey bars show the percentage of a feature in the genome while the solid red bars show the percentage in the sample. Thus, the solid red bars may be sometimes higher than the grey bars because certain features (e.g. protein coding genes) may be detected within a sample with a higher proportion relatively to their presence in the genome, as compared with other features. For example, while the percentage of protein coding genes in the whole genome is already higher than other biotypes, this percentage is expected to be even higher in an RNA-Seq experiment where one expects protein-coding genes to exhibit greater abundance. The vertical green line separates the most abundant biotypes (on the left-hand side, corresponding to the left axis scale) from the rest (on the right-hand side, corresponding to the right axis scale). Otherwise, the lower abundance biotypes would be indistinguishable. Unexpected outcomes in this quality control chart (e.g. very low detection of protein coding genes) would signify possible low quality of a sample.

Biotype detection counts

The biotype detection counts boxplots are a set of quality control charts that depict both the biological classification for the detected features and the actual distribution of the read counts for each biological type. The boxplot comprises a means of summarizing the read counts distribution of a sample in the form of a bar with extending lines, as commonly used way of graphically presenting groups of numerical data. A boxplot also indicates which observations, if any, might be considered outliers and is able to visually show different types of populations, without making any assumptions of the underlying statistical distribution. The spacing between the different parts of the box help indicate variance, skewness and identify outliers. The thick bar inside the colored box is the median of the observations while the box extends over the Interquartile Range of the observations. The whiskers extend up (down) to +/-1.5xIQR. Unexpected outcomes (e.g. protein coding read count distribution similar to pseudogene read count distribution) indicates poor sample quality.

Read and biotype saturation

The read and biotype saturation plots are a set of quality control charts that depict the read count saturation levels at several sequencing depths. Thus, they comprise a means of assessing whether the sequencing depth of an RNA-Seq experiment is sufficient in order to detect the biological features under investigation. These quality control charts are separated in two subgroups: the first subgroup (read saturation per biotype for all samples) is a set of plots, one for each biological feature (e.g. protein coding, pseudogene, lincRNA, etc.), that depict the number of detected features in different sequencing depths and for all samples in the same plot. The second subgroup (read saturation per sample for all biotypes) is a set of plots similar to the above, but with, there is one pair of plots with two panels for each sample, presenting all biological features. The left panel depicts the saturation levels for the less abundatnt features, while the right panel, the saturation for the more abundant features, as placing them all together would make the less abundant features indistinguishable. All the saturation plots should be interpreted as follows: if the read counts for a biotype tend to be saturated, the respective curve should tend to reach a plateau at higher depths. Otherwise, more sequencing is needed for the specific biotype.

Read saturation per biotype for all samples

Read saturation per sample for all biotypes

RNA-Seq reads noise

The read noise plots depict the percentage of biological features detected when subsampling the total number of reads. Very steep curves in read noise plots indicate that although the sequencing depth reaches its maximum, a relatively small percentage of total features is detected, indicating that the level of background noise is relatively high. Less steep RNA composition curves, indicate less noise. When a sample's curve deviate from the rest, it could indicate lower or higher quality, depending on the curves of the rest of the samples.

Correlation plots

The sample correlation plots depict the accordance among the RNA-Seq samples, as this is manifested through the read counts table used with the metaseqr pipeline, with two representations that both use the correlation matrix (a matrix which depicts all the pairwise correlations between each pair of samples) of the read counts matrix. The first is a correlation clustered heatmap which depicts the correlations among samples as color-scaled image and the hierarchical clustering tree depicts the grouping of the samples according to their correlation. Samples from the same group that are not clustered together provides an indication that there might be a quality problem with the dataset. The second is a 'correlogram' plot, where again the samples are hierarchically clustered and grouped but this time correlations are presented as ellipses inside each cell. Each cell represents a pairwise comparison and each correlation coefficient is represented by an ellipse whose 'diameter', direction and color depict the accordance for that pair of samples. Highly correlated samples are depicted as ellipses with narrow diameter, while poorly correlated samples are depicted as ellipses with wide diameters. Also, highly correlated samples are depicted as ellipses with a left-to-right upwards direction while poorly correlated samples are depicted as ellipses with a right-to-left upwards direction.

Correlation heatmap

Data correlogram

Pairwise scatterplots

The pairwise comparison plots are split in three parts: the upper diagonal consists of simple scatterplots for all pairwise sample comparisons, together with their Pearson correlation coefficient. It is a simple measure of between sample correlation using all the available data points instead of only the correlation matrix. The lower diagonal consists of mean-difference plots for all pairwise sample comparisons. A mean-difference plot (or a Bland-Altman plots) is a method of data plotting used in analyzing the agreement between two different assays/variables. In this graphical method the differences (or alternatively the ratios) between the two variables are plotted against the averages of the two. Such a plot is useful, for example, for analyzing data with strong correlation between x and y axes, when the (x,y) dots on the plot are close to the diagonal x=y. In this case, the value of the transformed variable X is about the same as x and y and the variable Y shows the difference between x and y. In both represantations, irregular shapes of the red smoother lines are an indication of poor correlation between samples or of other systematic bias sources, which is usually corrected through data normalization.

Boxplots

The boxplot comprises a means of summarizing the read counts distribution of a sample in the form of a bar with extending lines, as a commonly used way of graphically presenting groups of numerical data. A boxplot also indicates which observations, if any, might be considered outliers and is able to visually show different types of populations, without making any assumptions about the underlying statistical distribution. The spacings between the different parts of the box help indicate variance, skewness and identify outliers. The thick bar inside the colored box is the median of the observations while the box extends over the Interquartile Range of the observations. The whiskers extend up (down) to +/-1.5xIQR. Boxplots at similar levels indicate good quality of the normalization. If boxplots remain at different levels after normalization, maybe another normalization algorithm may have to be examined. The un-normalized boxplots show the need for data normalization in order for the data from different samples to follow the same underlying distribution and statistical testing becoming possible.

Boxplot of un-normalized data

Boxplot of normalized data

GC content bias

The GC-content bias plot is a quality control chart that shows the possible dependence of the read counts (in log2 scale) under a gene to the GC content percentage of that gene. In order for the statistical tests to be able to detect statistical significance which occurs due to real biological effects and not by other systematic biases present in the data (e.g. a possible GC-content bias), the latter should be accounted for by the applied normalization algorithm. Although the tests are performed for each gene across biological conditions one could assume that the GC content does not represent a bias, as it is the same for the tested gene across samples and conditions. However, Risso et al. (2011) showed that the GC-content could have an impact in the statistical testing procedure. The GC-content bias plot depicts the dependence of the read counts to the GC content before and after normalization. The smoothing lines for each sample, should be as 'straight' as possible after normalization. In addition, if the smoothing lines differ significantly between biological conditions, this would constitute a possible quality warning.

GC content bias un-normalized

GC content bias normalized

Gene/transcript length bias

The gene/transcript length bias plot is a quality control chart that shows the possible dependence of the read counts (in log2 scale) under a gene to the length that gene (whole gene or sum of exons depending on the analysis). In order for the statistical tests to be able to detect statistical significance which occurs due to real biological effects and not by other systematic biases present in the data (e.g. a possible length bias), the latter should be accounted for by the applied normalization algorithm. Although the tests are performed for each gene across bioogical conditions, one could assume that the gene length does not represent a bias as it's the same for the tested gene across samples and conditions. However, it has been shown in several studies that the gene length could have an impact on the statistical testing procedure. The length bias plot depicts the dependence of the read counts to the gene/transcript length before and after normalization. The smoothing lines for each sample, should be as 'straight' as possible after normalization. In addition, if the smoothing lines differ significantly among biological conditions, this would constitute a possible quality warning.

Gene/transcript length bias un-normalized

Gene/transcript length bias normalized

Mean-difference

A mean-difference plot (or a Bland-Altman plot) is a method of data plotting used in analyzing the agreement between two different assays/variables. In this graphical method the differences (or alternatively the ratios) between the two variables are plotted against the averages of the two. Such a plot is useful, for example, for analyzing data with strong correlation between x and y axes, when the (x,y) dots on the plot are close to the diagonal x=y. In this case, the value of the transformed variable X is about the same as x and y and the variable Y shows the difference between x and y. When the data cloud in a mean difference plot is centered around the horizontal zero line, this is an indication of good data quality and good normalization results. On the other hand, when the data cloud deviates from the center line or has a 'banana' shape, this constitutes an indication of systematic biases present in the data and that either the chosen normalization algorithm has not worked well, or that data are not normalized. The smoothing curve that traverses the data (red curve) summarizes the above trends.

Mean-difference plots for the replicates of MU

Mean-difference plots for the replicates of MI

Mean-difference plots for the replicates of CU

Mean-difference plots for the replicates of CI

Mean-difference plots for the replicates of CL

Mean-difference plots for the replicates of ML

Mean-variance

The mean-variance plot comprises a graphical means of displaying a possible relationship between the means of gene expression (counts) values and their variances across replicates of the same biological condition. Thus data can be inspected for possible overdispersion (greater variability in a dataset than would be expected based on a given simple statistical model). In such plots for RNA-Seq data, overdispersion is usually manifested as increasing variance with increasing gene expression (counts) and it is summarized through a smoothing curve (red curve). The following is taken from the EDASeq package vignette: '...although the Poisson distribution is a natural and simple way to model count data, it has the limitation of assuming equality of the mean and variance. For this reason, the negative binomial distribution has been proposed as an alternative when the data show over-dispersion...' If overdispersion is not present, the data cloud is expected to be evenly scattered around the smoothing curve.

Mean-variance plots for the replicates of MU

Mean-variance plots for the replicates of MI

Mean-variance plots for the replicates of CU

Mean-variance plots for the replicates of CI

Mean-variance plots for the replicates of CL

Mean-variance plots for the replicates of ML

Chromosome and biotype distribution of filtered genes

The chromosome and biotype distribution of filtered genes is a quality control chart with two rows and four panels: on the left panel of the first row, the bar chart depicts the numbers of filtered genes per chromosome (actual numbers shown above the bars). On the right panel of the first row, the bar chart depicts the numbers of filtered genes per biotype (actual numbers shown above the bars). On the left panel of the second row, the bar chart depicts the fraction of the filtered genes to the total genes per chromosome (actual percentages shown above the bars). On the right panel of the second row, the bar chart depicts the fraction of the filtered genes to the total genes per biotype (actual percentages shown above the bars). This plot should indicate possible quality problems when for example the filtered genes for a specific chromosome (or the fraction) is extremely higher than the rest. Generally, the fractions per chromosome should be uniform and the fractions per biotype should be proportional to the biotype fraction relative to the genome.

Volcano plots

A volcano plot is a scatterplot that is often used when analyzing high-throughput -omics data (e.g. microarray data, RNA-Seq data) to give an overview of interesting genes. The log2 fold change is plotted on the x-axis and the negative log10 p-value is plotted on the y-axis. A volcano plot combines the results of a statistical test (aka, p-values) with the magnitude of the change enabling quick visual identification of those genes that display large-magnitude changes that are also statistically significant. The horizontal dashed line sets the threshold for statistical significance, while the vertical dashed lines set the thresholds for biological significance. It should be noted that the volcano plots become harder to interpret when using more than one statistical algorithm and performing meta-analysis. This happens because the genes that have stronger evidence of being differentially expressed obtain lower p-values while the rest either remain at similar levels or obtain higher p-values. The result is a 'warped' volcano plot, with two main data clouds: one in the upper part of the plot, and one in the lower part of the plot. You can always zoom in when using interacting mode (the default).

Volcano plot for the contrast ML_vs_MU

Volcano plot for the contrast CL_vs_CU

Volcano plot for the contrast ML_vs_CL

Volcano plot for the contrast MI_vs_CI

Volcano plot for the contrast ML_vs_MI

Volcano plot for the contrast CL_vs_CI

Volcano plot for the contrast MU_vs_CU

DEG heatmaps

The Differentially Expressed Genes (DEGs) heatmaps depict how well samples from different conditions cluster together according to their expression values after normalization and statistical testing, for each requested statistical contrast. If samples from the same biological condition do not cluster together, this would constitute a warning sign regarding the quality of the samples. In addition, DEG heatmaps provide an initial view of possible clusters of co-expressed genes.

DEG heatmap for the contrast ML_vs_MU

DEG heatmap for the contrast CL_vs_CU

DEG heatmap for the contrast ML_vs_CL

DEG heatmap for the contrast MI_vs_CI

DEG heatmap for the contrast ML_vs_MI

DEG heatmap for the contrast CL_vs_CI

DEG heatmap for the contrast MU_vs_CU

Chromosome and biotype distributions of DEGs

The chromosome and biotype distributions bar diagram for Differentially Expressed Genes (DEGs) is split in two panels: i) on the left panel DEGs are distributed per chromosome and the percentage of each chromosome in the genome is presented in grey bars, the percentage of DEGs in each chromosome is presented in red lined bars and the percentage of certain chromosomes in the distribution of DEGs is presented in solid red bars. ii) on the right panel, DEGs are distributed per biotype and the percentage of each biotype in the genome (i.e. in the whole set of features provided, for example, protein coding genes, non coding RNAs or pseudogenes) is presented in grey bars, the percentage of DEGs in each biotype is presented in blue lined bars and the percentage of each biotype in DEGs is presented in solid blue lines. The vertical green line separates the most abundant biotypes (on the left-hand side, corresponding to the left axis scale), from the rest (on the right-hand side, corresponding to the right axis scale). Otherwise, the lower abundance, biotypes would be indistinguishable.

Biotype distribution in DEG for the contrast ML_vs_MU

Biotype distribution in DEG for the contrast CL_vs_CU

Biotype distribution in DEG for the contrast ML_vs_CL

Biotype distribution in DEG for the contrast MI_vs_CI

Biotype distribution in DEG for the contrast ML_vs_MI

Biotype distribution in DEG for the contrast CL_vs_CI

Biotype distribution in DEG for the contrast MU_vs_CU

Get all the figures in png, pdf format.

Results

DEG table for the contrast ML_vs_MU

The following table presents the top 10% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast ML_vs_MU. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right.

chromosome	start	end	gene_id	gc_content	strand	gene_name	biotype	p-value_deseq	FDR_deseq	log2_normalized_fold_change_ML_vs_MU	log2_normalized_mean_counts_ML	rpgm_normalized_mean_counts_ML	log2_normalized_mean_counts_MU	rpgm_normalized_mean_counts_MU	log2_normalized_counts_GK3R167-ML1	log2_normalized_counts_GK3R168-ML2	log2_normalized_counts_GK3R169-ML3	rpgm_normalized_counts_GK3R167-ML1	rpgm_normalized_counts_GK3R168-ML2	rpgm_normalized_counts_GK3R169-ML3	log2_normalized_counts_GK3R140_MU1	log2_normalized_counts_GK3R141_MU2	log2_normalized_counts_GK3R142_MU3	rpgm_normalized_counts_GK3R140_MU1	rpgm_normalized_counts_GK3R141_MU2	rpgm_normalized_counts_GK3R142_MU3
chr10	81182605	81183849	ENSMUSG00000053603	0.5293	-	4930442H23Rik	protein_coding	4.34e-43	7.89e-39	-1.40e+01	1.40e+01	1.32e+01	0.00e+00	0.00e+00	1.41e+01	1.41e+01	1.39e+01	1.37e+01	1.36e+01	1.23e+01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	37714190	37724490	ENSMUSG00000058174	0.4589	-	Gm5148	protein_coding	7.84e-40	7.12e-36	-1.31e+01	1.30e+01	2.98e+00	0.00e+00	0.00e+00	1.26e+01	1.29e+01	1.36e+01	2.13e+00	2.68e+00	4.12e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	29376671	29388468	ENSMUSG00000058831	0.4835	-	Opn1sw	protein_coding	2.61e-37	1.58e-33	-1.20e+01	1.33e+01	1.95e+00	1.00e+00	2.65e-04	1.33e+01	1.30e+01	1.35e+01	1.95e+00	1.67e+00	2.23e+00	0.00e+00	2.00e+00	1.00e+00	0.00e+00	5.96e-04	1.99e-04
chr10	60302748	60696490	ENSMUSG00000012819	0.5079	-	Cdh23	protein_coding	1.15e-35	5.23e-32	-1.13e+01	1.22e+01	5.92e-01	8.62e-01	1.21e-04	1.23e+01	1.27e+01	1.16e+01	5.92e-01	7.99e-01	3.85e-01	0.00e+00	1.00e+00	1.58e+00	0.00e+00	1.21e-04	2.43e-04
chr6	72953236	72957247	ENSMUSG00000097569	0.4743	+	Gm26640	lincRNA	2.91e-34	1.06e-30	-1.12e+01	1.12e+01	1.94e+00	0.00e+00	0.00e+00	1.13e+01	1.10e+01	1.14e+01	2.01e+00	1.67e+00	2.13e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	127982570	127984881	ENSMUSG00000097751	0.4010	-	Gm26690	lincRNA	3.52e-34	1.07e-30	-1.14e+01	1.12e+01	2.12e+00	0.00e+00	0.00e+00	1.06e+01	1.10e+01	1.21e+01	1.27e+00	1.59e+00	3.49e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	39847113	39848035	ENSMUSG00000105361	0.5439	-	AY036118	lincRNA	6.95e-34	1.80e-30	-1.12e+01	1.10e+01	1.86e+00	0.00e+00	0.00e+00	1.00e+01	1.16e+01	1.15e+01	8.34e-01	2.48e+00	2.25e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	121439059	121456781	ENSMUSG00000046110	0.4888	-	Serinc4	protein_coding	7.93e-32	1.80e-28	-1.06e+01	1.06e+01	7.98e-02	0.00e+00	0.00e+00	1.06e+01	1.08e+01	1.04e+01	7.79e-02	9.02e-02	7.12e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	17284721	17329359	ENSMUSG00000020566	0.4798	-	Atp6v1c2	protein_coding	1.21e-31	2.45e-28	-1.06e+01	1.06e+01	1.47e-01	0.00e+00	0.00e+00	1.09e+01	1.02e+01	1.06e+01	1.81e-01	1.14e-01	1.48e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	9985174	10001633	ENSMUSG00000037418	0.4892	-	Best1	protein_coding	3.10e-31	5.64e-28	-9.91e+00	1.21e+01	1.65e+00	1.77e+00	1.35e-03	1.24e+01	1.21e+01	1.19e+01	1.95e+00	1.57e+00	1.42e+00	0.00e+00	3.00e+00	2.32e+00	0.00e+00	2.57e-03	1.47e-03
chr8	13172022	13200620	ENSMUSG00000038515	0.5033	-	Grtp1	protein_coding	1.88e-30	3.10e-27	-9.52e+00	1.20e+01	5.28e-01	1.76e+00	5.94e-04	1.24e+01	1.18e+01	1.18e+01	6.84e-01	4.41e-01	4.58e-01	1.58e+00	3.70e+00	0.00e+00	2.55e-04	1.53e-03	0.00e+00
chr11	50174444	50200115	ENSMUSG00000020381	0.4711	+	3010026O09Rik	protein_coding	3.66e-30	5.54e-27	-9.77e+00	1.18e+01	5.82e-01	1.80e+00	4.99e-04	1.20e+01	1.17e+01	1.16e+01	6.71e-01	5.50e-01	5.25e-01	2.81e+00	1.00e+00	1.58e+00	9.97e-04	1.66e-04	3.32e-04
chr10	70868669	70934324	ENSMUSG00000047692	0.4390	+	4930533K18Rik	protein_coding	1.04e-29	1.45e-26	-1.01e+01	1.01e+01	2.71e-01	0.00e+00	0.00e+00	9.83e+00	1.03e+01	1.01e+01	2.27e-01	3.18e-01	2.68e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	140898945	140900446	ENSMUSG00000025488	0.5360	-	Cox8b	protein_coding	1.18e-29	1.53e-26	-1.01e+01	1.01e+01	8.48e-01	0.00e+00	0.00e+00	1.03e+01	9.85e+00	1.01e+01	1.00e+00	7.12e-01	8.33e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	46711998	46715700	ENSMUSG00000040026	0.4807	-	Saa3	protein_coding	5.24e-29	6.35e-26	-9.74e+00	1.26e+01	1.37e+00	2.11e+00	1.38e-03	1.30e+01	1.24e+01	1.24e+01	1.77e+00	1.14e+00	1.19e+00	0.00e+00	2.32e+00	4.00e+00	0.00e+00	8.71e-04	3.27e-03
chr7	28881422	28893563	ENSMUSG00000054083	0.5460	+	Capn12	protein_coding	8.29e-29	9.42e-26	-9.58e+00	1.12e+01	7.43e-01	9.36e-01	6.49e-04	1.13e+01	1.11e+01	1.11e+01	7.95e-01	7.14e-01	7.20e-01	0.00e+00	0.00e+00	2.81e+00	0.00e+00	0.00e+00	1.95e-03
chr9	66065176	66069719	ENSMUSG00000039452	0.5427	-	Snx22	protein_coding	4.24e-28	4.53e-25	-9.69e+00	9.68e+00	1.86e-01	0.00e+00	0.00e+00	9.52e+00	9.89e+00	9.63e+00	1.65e-01	2.13e-01	1.79e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	74278550	74279624	ENSMUSG00000064272	0.6130	+	Gpbar1	protein_coding	5.95e-28	6.01e-25	-9.33e+00	1.07e+01	1.66e+00	1.11e+00	1.61e-03	1.09e+01	1.06e+01	1.08e+01	1.79e+00	1.49e+00	1.70e+00	2.32e+00	1.00e+00	0.00e+00	3.87e-03	9.67e-04	0.00e+00
chr5	90759360	90761624	ENSMUSG00000029371	0.4190	+	Cxcl5	protein_coding	6.47e-28	6.19e-25	-9.29e+00	1.22e+01	2.03e+00	2.80e+00	2.82e-03	1.24e+01	1.24e+01	1.18e+01	2.25e+00	2.32e+00	1.51e+00	2.00e+00	2.81e+00	3.58e+00	1.27e-03	2.54e-03	4.65e-03
chr9	120955351	121277197	ENSMUSG00000040936	0.4889	-	Ulk4	protein_coding	1.05e-27	9.56e-25	-9.04e+00	1.15e+01	6.60e-02	2.46e+00	1.03e-04	1.14e+01	1.15e+01	1.17e+01	6.07e-02	6.36e-02	7.37e-02	2.00e+00	2.81e+00	2.58e+00	6.63e-05	1.33e-04	1.11e-04
chr9	58652850	58743964	ENSMUSG00000074269	0.4395	-	Rec114	protein_coding	1.19e-27	1.03e-24	-9.45e+00	1.04e+01	5.37e-01	6.67e-01	3.85e-04	1.05e+01	1.02e+01	1.06e+01	5.55e-01	4.66e-01	5.90e-01	0.00e+00	0.00e+00	2.00e+00	0.00e+00	0.00e+00	1.15e-03
chr1	9908638	9942085	ENSMUSG00000046101	0.3985	+	Mcmdc2	protein_coding	2.05e-27	1.69e-24	-9.41e+00	9.80e+00	1.27e-01	3.33e-01	4.66e-05	9.40e+00	9.90e+00	1.01e+01	9.43e-02	1.33e-01	1.54e-01	0.00e+00	1.00e+00	0.00e+00	0.00e+00	1.40e-04	0.00e+00
chr17	35062693	35066184	ENSMUSG00000073414	0.5284	-	G6b	protein_coding	2.52e-27	1.99e-24	-9.54e+00	9.52e+00	2.56e-01	0.00e+00	0.00e+00	9.59e+00	9.23e+00	9.75e+00	2.66e-01	2.06e-01	2.97e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	29170210	29173976	ENSMUSG00000031493	0.6010	+	Ggn	protein_coding	3.46e-27	2.62e-24	-9.06e+00	1.13e+01	9.39e-01	2.16e+00	1.38e-03	1.14e+01	1.10e+01	1.14e+01	1.04e+00	7.80e-01	9.99e-01	2.58e+00	2.32e+00	1.58e+00	1.89e-03	1.51e-03	7.54e-04
chr1	75450436	75474343	ENSMUSG00000033007	0.5347	+	Asic4	protein_coding	3.83e-27	2.78e-24	-9.52e+00	9.52e+00	3.73e-01	0.00e+00	0.00e+00	9.45e+00	9.51e+00	9.60e+00	3.54e-01	3.70e-01	3.95e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	143069153	143094642	ENSMUSG00000009246	0.5298	-	Trpm5	protein_coding	1.07e-26	7.47e-24	-9.36e+00	9.36e+00	5.62e-02	0.00e+00	0.00e+00	9.37e+00	9.20e+00	9.50e+00	5.64e-02	5.02e-02	6.18e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	25218745	25222280	ENSMUSG00000026969	0.4938	+	Fam166a	protein_coding	1.36e-26	9.15e-24	-9.53e+00	9.41e+00	5.41e-01	0.00e+00	0.00e+00	8.92e+00	9.13e+00	1.02e+01	3.54e-01	4.12e-01	8.57e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr18	36735068	36742391	ENSMUSG00000006850	0.4870	+	Tmco6	protein_coding	1.96e-26	1.27e-23	-9.07e+00	1.03e+01	8.43e-01	1.19e+00	9.00e-04	1.02e+01	1.01e+01	1.05e+01	8.15e-01	7.31e-01	9.84e-01	1.00e+00	1.00e+00	1.58e+00	6.75e-04	6.75e-04	1.35e-03
chr8	71624417	71671757	ENSMUSG00000034799	0.5418	-	Unc13a	protein_coding	2.22e-26	1.39e-23	-8.81e+00	1.10e+01	1.25e-01	2.06e+00	2.18e-04	1.13e+01	1.09e+01	1.09e+01	1.48e-01	1.12e-01	1.15e-01	3.00e+00	1.58e+00	1.58e+00	4.16e-04	1.19e-04	1.19e-04
chr5	113842601	113843116	ENSMUSG00000090458	0.5271	+	Gm17122	antisense	2.63e-26	1.59e-23	-9.28e+00	9.26e+00	4.96e-01	0.00e+00	0.00e+00	8.89e+00	9.34e+00	9.54e+00	3.78e-01	5.15e-01	5.94e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	90104132	90212048	ENSMUSG00000027939	0.4384	+	Nup210l	protein_coding	3.10e-26	1.82e-23	-9.24e+00	9.23e+00	4.69e-01	0.00e+00	0.00e+00	9.19e+00	9.39e+00	9.12e+00	4.54e-01	5.20e-01	4.33e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	16455721	16477728	ENSMUSG00000001988	0.5276	-	Npas1	protein_coding	5.32e-26	3.02e-23	-9.29e+00	9.27e+00	2.38e-01	0.00e+00	0.00e+00	9.39e+00	8.94e+00	9.49e+00	2.55e-01	1.86e-01	2.74e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	156872457	156887192	ENSMUSG00000027636	0.5173	-	Sla2	protein_coding	6.48e-26	3.54e-23	-9.21e+00	9.21e+00	1.84e-01	0.00e+00	0.00e+00	9.23e+00	9.13e+00	9.26e+00	1.87e-01	1.74e-01	1.90e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	3567990	3584939	ENSMUSG00000065952	0.4553	+	C330021F23Rik	protein_coding	6.62e-26	3.54e-23	-9.16e+00	9.15e+00	1.29e-01	0.00e+00	0.00e+00	8.88e+00	9.23e+00	9.34e+00	1.06e-01	1.35e-01	1.46e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69851005	69858730	ENSMUSG00000001583	0.5286	-	Tnk1	protein_coding	8.25e-26	4.28e-23	-9.16e+00	9.14e+00	9.64e-02	0.00e+00	0.00e+00	9.17e+00	9.40e+00	8.86e+00	9.69e-02	1.14e-01	7.85e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	139579376	139582797	ENSMUSG00000041309	0.5786	-	Nkx6-2	protein_coding	1.42e-25	7.15e-23	-9.11e+00	9.10e+00	1.79e-01	0.00e+00	0.00e+00	9.34e+00	8.89e+00	9.06e+00	2.10e-01	1.55e-01	1.73e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	12923833	12940402	ENSMUSG00000062480	0.4584	-	Acat3	protein_coding	1.70e-25	8.34e-23	-8.68e+00	9.89e+00	4.45e-01	1.19e+00	6.21e-04	1.00e+01	9.65e+00	1.00e+01	4.79e-01	3.74e-01	4.83e-01	1.00e+00	1.58e+00	1.00e+00	4.66e-04	9.32e-04	4.66e-04
chr9	107558809	107568415	ENSMUSG00000097099	0.4994	-	Gm9917	antisense	2.08e-25	9.95e-23	-9.18e+00	9.13e+00	1.15e-01	0.00e+00	0.00e+00	9.06e+00	8.72e+00	9.60e+00	1.06e-01	8.41e-02	1.55e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	95897768	95904691	ENSMUSG00000038526	0.5042	-	Car14	protein_coding	5.81e-25	2.71e-22	-9.06e+00	9.04e+00	9.88e-02	0.00e+00	0.00e+00	8.86e+00	8.88e+00	9.38e+00	8.58e-02	8.73e-02	1.23e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	29743048	30026033	ENSMUSG00000044072	0.4117	-	Eml6	protein_coding	5.99e-25	2.72e-22	-8.56e+00	1.03e+01	7.41e-02	1.27e+00	1.38e-04	1.04e+01	1.02e+01	1.03e+01	8.08e-02	6.98e-02	7.19e-02	2.81e+00	0.00e+00	1.00e+00	3.54e-04	0.00e+00	5.90e-05
chr8	105518755	105523988	ENSMUSG00000031891	0.5481	+	Hsd11b2	protein_coding	9.43e-25	4.18e-22	-8.95e+00	8.92e+00	2.70e-01	0.00e+00	0.00e+00	9.26e+00	8.87e+00	8.64e+00	3.36e-01	2.56e-01	2.18e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	115909455	116076176	ENSMUSG00000056880	0.4482	+	Gadl1	protein_coding	1.07e-24	4.63e-22	-8.23e+00	1.10e+01	4.40e-01	2.78e+00	1.25e-03	1.13e+01	1.08e+01	1.10e+01	5.35e-01	3.64e-01	4.21e-01	2.58e+00	2.58e+00	3.17e+00	1.05e-03	1.05e-03	1.67e-03
chr8	92853653	92856334	ENSMUSG00000109669	0.5272	-	Gm45472	antisense	1.21e-24	5.10e-22	-8.99e+00	8.93e+00	4.06e-01	0.00e+00	0.00e+00	8.48e+00	9.50e+00	8.81e+00	2.84e-01	5.75e-01	3.58e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	79970715	79977190	ENSMUSG00000035745	0.5865	+	Grin3b	protein_coding	1.91e-24	7.89e-22	-9.07e+00	9.04e+00	2.06e-01	0.00e+00	0.00e+00	8.73e+00	9.02e+00	9.38e+00	1.63e-01	1.99e-01	2.55e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	172320501	172329318	ENSMUSG00000038026	0.5319	-	Kcnj9	protein_coding	3.44e-24	1.39e-21	-8.88e+00	8.87e+00	9.65e-02	0.00e+00	0.00e+00	9.05e+00	8.70e+00	8.87e+00	1.09e-01	8.50e-02	9.57e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	100621342	100636865	ENSMUSG00000053559	0.4926	-	Smagp	protein_coding	3.74e-24	1.48e-21	-8.50e+00	9.24e+00	3.43e-01	6.67e-01	3.79e-04	9.37e+00	9.17e+00	9.16e+00	3.76e-01	3.27e-01	3.26e-01	1.00e+00	0.00e+00	1.00e+00	5.68e-04	0.00e+00	5.68e-04
chr11	101279012	101296317	ENSMUSG00000078653	0.4580	+	Cntd1	protein_coding	4.73e-24	1.83e-21	-8.53e+00	9.27e+00	1.26e-01	6.67e-01	1.37e-04	9.24e+00	9.17e+00	9.39e+00	1.24e-01	1.18e-01	1.37e-01	1.00e+00	0.00e+00	1.00e+00	2.05e-04	0.00e+00	2.05e-04
chr6	127122966	127126155	ENSMUSG00000107379	0.4564	+	Gm43126	antisense	5.00e-24	1.86e-21	-8.81e+00	8.80e+00	3.56e-01	0.00e+00	0.00e+00	8.61e+00	8.88e+00	8.91e+00	3.11e-01	3.76e-01	3.83e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	76324891	76334153	ENSMUSG00000021057	0.4478	+	Akap5	protein_coding	5.01e-24	1.86e-21	-7.89e+00	1.19e+01	7.39e-01	4.03e+00	2.93e-03	1.24e+01	1.17e+01	1.16e+01	1.01e+00	6.17e-01	5.93e-01	4.32e+00	4.17e+00	3.58e+00	3.55e-03	3.18e-03	2.05e-03
chr6	115774538	115805557	ENSMUSG00000030319	0.5026	+	Cand2	protein_coding	8.16e-24	2.97e-21	-7.99e+00	1.13e+01	8.92e-01	3.34e+00	3.17e-03	1.14e+01	1.11e+01	1.15e+01	9.35e-01	7.27e-01	1.01e+00	3.00e+00	3.32e+00	3.70e+00	2.38e-03	3.05e-03	4.07e-03
chr11	96766802	96768269	ENSMUSG00000085242	0.5293	+	Gm11537	antisense	8.93e-24	3.18e-21	-8.85e+00	8.84e+00	3.66e-01	0.00e+00	0.00e+00	8.64e+00	8.85e+00	9.03e+00	3.17e-01	3.66e-01	4.15e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	125362660	125380793	ENSMUSG00000038167	0.5280	-	Plekhg6	protein_coding	1.15e-23	4.03e-21	-8.74e+00	8.72e+00	2.93e-01	0.00e+00	0.00e+00	8.69e+00	8.99e+00	8.50e+00	2.83e-01	3.48e-01	2.48e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	44410159	44418569	ENSMUSG00000043923	0.4642	-	Ccdc84	protein_coding	1.18e-23	4.06e-21	-8.15e+00	1.03e+01	2.34e-01	1.97e+00	6.34e-04	1.04e+01	1.03e+01	1.01e+01	2.63e-01	2.35e-01	2.05e-01	2.32e+00	1.00e+00	2.58e+00	7.61e-04	1.90e-04	9.51e-04
chr14	66135039	66152948	ENSMUSG00000022041	0.4905	+	Chrna2	protein_coding	1.33e-23	4.48e-21	-8.58e+00	8.93e+00	1.63e-01	3.33e-01	1.07e-04	9.32e+00	8.34e+00	9.14e+00	2.04e-01	1.03e-01	1.80e-01	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	3.20e-04
chr1	92859803	92902906	ENSMUSG00000034212	0.4993	-	Ankmy1	protein_coding	2.07e-23	6.83e-21	-8.57e+00	8.55e+00	9.39e-02	0.00e+00	0.00e+00	8.68e+00	8.76e+00	8.22e+00	1.01e-01	1.07e-01	7.35e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	33630759	33645705	ENSMUSG00000092412	0.4843	+	Gm20507	processed_transcript	2.55e-23	8.29e-21	-8.56e+00	8.97e+00	4.00e-01	3.33e-01	2.66e-04	9.03e+00	8.78e+00	9.08e+00	4.17e-01	3.51e-01	4.31e-01	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	0.00e+00
chr16	5086291	5132481	ENSMUSG00000039457	0.5103	-	Ppl	protein_coding	2.95e-23	9.42e-21	-8.51e+00	8.85e+00	2.29e-01	3.33e-01	1.57e-04	8.34e+00	8.75e+00	9.47e+00	1.52e-01	2.02e-01	3.32e-01	1.00e+00	0.00e+00	0.00e+00	4.70e-04	0.00e+00	0.00e+00
chr8	84701457	84704715	ENSMUSG00000034041	0.5726	+	Lyl1	protein_coding	8.80e-23	2.76e-20	-8.53e+00	8.53e+00	2.22e-01	0.00e+00	0.00e+00	8.57e+00	8.62e+00	8.38e+00	2.29e-01	2.36e-01	2.00e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	43446462	43454628	ENSMUSG00000028459	0.5155	-	Cd72	protein_coding	1.65e-22	5.07e-20	-8.58e+00	8.58e+00	5.03e-02	0.00e+00	0.00e+00	8.46e+00	8.58e+00	8.70e+00	4.63e-02	5.01e-02	5.44e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	88171556	88177785	ENSMUSG00000096935	0.4767	-	1700113A16Rik	antisense	1.79e-22	5.37e-20	-8.52e+00	8.50e+00	1.46e-01	0.00e+00	0.00e+00	8.17e+00	8.74e+00	8.58e+00	1.15e-01	1.70e-01	1.52e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	80879720	80899441	ENSMUSG00000059406	0.5335	+	Tmprss9	protein_coding	1.80e-22	5.37e-20	-8.32e+00	8.29e+00	2.35e-01	0.00e+00	0.00e+00	8.72e+00	8.18e+00	7.95e+00	3.11e-01	2.13e-01	1.82e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	27153714	27158668	ENSMUSG00000078787	0.5269	+	Cyp2t4	protein_coding	2.72e-22	7.97e-20	-8.45e+00	8.44e+00	2.57e-01	0.00e+00	0.00e+00	8.60e+00	8.23e+00	8.49e+00	2.86e-01	2.21e-01	2.64e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	155611212	155634307	ENSMUSG00000074652	0.5475	+	Myh7b	protein_coding	3.58e-22	1.03e-19	-8.43e+00	8.40e+00	1.26e-01	0.00e+00	0.00e+00	8.56e+00	8.64e+00	8.00e+00	1.38e-01	1.46e-01	9.36e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	101818313	101822726	ENSMUSG00000007946	0.5659	+	Phox2a	protein_coding	7.66e-22	2.17e-19	-8.43e+00	8.43e+00	1.12e-01	0.00e+00	0.00e+00	8.27e+00	8.39e+00	8.62e+00	9.94e-02	1.08e-01	1.27e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr16	11178176	11192292	ENSMUSG00000096959	0.4570	+	4930509G22Rik	lincRNA	9.77e-22	2.73e-19	-8.00e+00	8.72e+00	3.39e-01	5.28e-01	5.32e-04	8.74e+00	8.97e+00	8.44e+00	3.40e-01	4.00e-01	2.76e-01	0.00e+00	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.59e-03
chr11	101260567	101277409	ENSMUSG00000035112	0.5101	+	Wnk4	protein_coding	1.26e-21	3.47e-19	-8.34e+00	8.33e+00	1.56e-02	0.00e+00	0.00e+00	8.45e+00	8.19e+00	8.36e+00	1.69e-02	1.42e-02	1.59e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	106870242	106884566	ENSMUSG00000031910	0.5057	+	Has3	protein_coding	1.70e-21	4.62e-19	-8.40e+00	8.39e+00	4.90e-02	0.00e+00	0.00e+00	8.50e+00	8.11e+00	8.56e+00	5.23e-02	4.00e-02	5.45e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	119236526	119352407	ENSMUSG00000041460	0.4873	+	Cacna2d4	protein_coding	2.15e-21	5.75e-19	-8.35e+00	8.24e+00	2.64e-02	0.00e+00	0.00e+00	9.01e+00	7.85e+00	7.86e+00	4.18e-02	1.85e-02	1.88e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	144264526	144358112	ENSMUSG00000038859	0.4482	-	Baiap2l1	protein_coding	2.61e-21	6.88e-19	-7.33e+00	1.02e+01	3.14e-01	2.66e+00	1.69e-03	1.01e+01	9.84e+00	1.07e+01	2.86e-01	2.32e-01	4.23e-01	1.58e+00	3.81e+00	2.58e+00	5.08e-04	3.30e-03	1.27e-03
chr2	38997476	39006168	ENSMUSG00000035295	0.5293	+	Wdr38	protein_coding	2.79e-21	7.24e-19	-8.11e+00	8.11e+00	5.21e-02	0.00e+00	0.00e+00	8.12e+00	7.99e+00	8.21e+00	5.25e-02	4.78e-02	5.59e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	45906497	45929726	ENSMUSG00000035382	0.4761	+	Pcsk7	protein_coding	3.27e-21	8.36e-19	-7.29e+00	1.25e+01	4.26e-01	5.23e+00	2.65e-03	1.29e+01	1.24e+01	1.24e+01	5.30e-01	3.75e-01	3.74e-01	4.91e+00	5.25e+00	5.52e+00	2.08e-03	2.65e-03	3.22e-03
chr17	33638056	33645706	ENSMUSG00000032739	0.4912	+	Pram1	protein_coding	3.36e-21	8.47e-19	-7.97e+00	8.97e+00	4.43e-02	6.67e-01	8.85e-05	9.03e+00	8.78e+00	9.08e+00	4.63e-02	3.89e-02	4.79e-02	2.00e+00	0.00e+00	0.00e+00	2.65e-04	0.00e+00	0.00e+00
chr2	152962485	153008482	ENSMUSG00000074673	0.4816	+	Ttll9	protein_coding	4.26e-21	1.06e-18	-8.29e+00	8.27e+00	1.96e-02	0.00e+00	0.00e+00	8.22e+00	8.02e+00	8.58e+00	1.86e-02	1.62e-02	2.40e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	97160990	97161675	ENSMUSG00000084936	0.3907	+	Gm11583	antisense	4.34e-21	1.07e-18	-8.26e+00	8.24e+00	2.44e-01	0.00e+00	0.00e+00	8.44e+00	7.94e+00	8.35e+00	2.76e-01	1.95e-01	2.60e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	102393403	102402555	ENSMUSG00000006575	0.5573	+	Rundc3a	protein_coding	4.71e-21	1.14e-18	-7.44e+00	9.44e+00	1.20e-01	1.64e+00	5.18e-04	9.42e+00	9.44e+00	9.47e+00	1.18e-01	1.19e-01	1.22e-01	2.58e+00	2.32e+00	0.00e+00	8.63e-04	6.90e-04	0.00e+00
chr1	39371492	39478755	ENSMUSG00000003134	0.4730	-	Tbc1d8	protein_coding	6.36e-21	1.52e-18	-7.57e+00	8.98e+00	2.33e-02	1.19e+00	7.68e-05	9.10e+00	8.98e+00	8.86e+00	2.53e-02	2.32e-02	2.14e-02	2.00e+00	1.58e+00	0.00e+00	1.38e-04	9.22e-05	0.00e+00
chr2	32777381	32784428	ENSMUSG00000038987	0.5155	-	Cfap157	protein_coding	9.66e-21	2.28e-18	-8.20e+00	8.19e+00	1.12e-01	0.00e+00	0.00e+00	8.33e+00	8.04e+00	8.21e+00	1.22e-01	9.98e-02	1.13e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	169969409	169972396	ENSMUSG00000097503	0.4060	+	3110045C21Rik	antisense	1.86e-20	4.34e-18	-7.52e+00	8.69e+00	3.35e-01	1.06e+00	1.04e-03	8.93e+00	9.04e+00	8.09e+00	3.81e-01	4.10e-01	2.12e-01	1.58e+00	0.00e+00	1.58e+00	1.56e-03	0.00e+00	1.56e-03
chr17	33810520	33822918	ENSMUSG00000042099	0.4973	+	Kank3	protein_coding	1.93e-20	4.43e-18	-7.23e+00	9.73e+00	4.23e-01	2.46e+00	2.32e-03	9.64e+00	9.82e+00	9.75e+00	3.95e-01	4.49e-01	4.26e-01	2.81e+00	2.58e+00	2.00e+00	2.98e-03	2.48e-03	1.49e-03
chr2	155278243	155357430	ENSMUSG00000038383	0.4369	-	Pigu	protein_coding	3.29e-20	7.48e-18	-7.06e+00	1.08e+01	4.50e-01	3.69e+00	3.12e-03	1.08e+01	1.08e+01	1.09e+01	4.36e-01	4.47e-01	4.69e-01	4.32e+00	3.17e+00	3.58e+00	4.69e-03	1.97e-03	2.71e-03
chr2	32308471	32353338	ENSMUSG00000026825	0.5353	-	Dnm1	protein_coding	3.51e-20	7.87e-18	-7.38e+00	9.24e+00	6.58e-02	1.83e+00	2.88e-04	9.31e+00	8.95e+00	9.46e+00	6.83e-02	5.31e-02	7.61e-02	1.58e+00	1.58e+00	2.32e+00	2.16e-04	2.16e-04	4.32e-04
chr6	83762644	83768326	ENSMUSG00000014747	0.5233	+	Ankrd53	protein_coding	4.13e-20	9.15e-18	-8.20e+00	8.19e+00	1.16e-01	0.00e+00	0.00e+00	8.33e+00	8.06e+00	8.19e+00	1.26e-01	1.05e-01	1.15e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	109614517	109674386	ENSMUSG00000048827	0.4630	+	Pkd1l3	protein_coding	4.37e-20	9.57e-18	-7.76e+00	8.16e+00	4.59e-02	3.33e-01	5.32e-05	7.99e+00	8.41e+00	8.10e+00	4.04e-02	5.39e-02	4.35e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	1.59e-04
chr7	119742856	119744110	ENSMUSG00000109404	0.4382	-	Gm19963	processed_pseudogene	5.92e-20	1.28e-17	-8.10e+00	8.10e+00	2.19e-01	0.00e+00	0.00e+00	8.17e+00	8.16e+00	7.97e+00	2.30e-01	2.27e-01	1.99e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	122169893	122186207	ENSMUSG00000030866	0.4982	-	Ern2	protein_coding	1.13e-19	2.41e-17	-8.24e+00	8.05e+00	1.12e-01	0.00e+00	0.00e+00	7.88e+00	7.24e+00	9.03e+00	8.68e-02	5.57e-02	1.93e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	105932003	105933862	ENSMUSG00000031896	0.5430	-	Ctrl	protein_coding	1.20e-19	2.54e-17	-8.00e+00	7.99e+00	9.96e-02	0.00e+00	0.00e+00	8.00e+00	8.21e+00	7.75e+00	9.96e-02	1.16e-01	8.36e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	83642825	83745726	ENSMUSG00000001741	0.4512	-	Il16	protein_coding	1.92e-19	4.00e-17	-8.03e+00	8.00e+00	1.64e-02	0.00e+00	0.00e+00	7.63e+00	8.22e+00	8.16e+00	1.24e-02	1.88e-02	1.80e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	36090379	36091829	ENSMUSG00000059301	0.4673	+	Gm5434	protein_coding	2.01e-19	4.11e-17	-8.00e+00	7.98e+00	1.42e-01	0.00e+00	0.00e+00	8.28e+00	7.71e+00	7.95e+00	1.73e-01	1.16e-01	1.38e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	34613349	34615971	ENSMUSG00000015467	0.5791	-	Egfl8	protein_coding	2.01e-19	4.11e-17	-7.21e+00	9.15e+00	1.41e-01	1.64e+00	7.16e-04	9.69e+00	8.79e+00	8.99e+00	1.96e-01	1.05e-01	1.21e-01	2.58e+00	0.00e+00	2.32e+00	1.19e-03	0.00e+00	9.55e-04
chr1	10993465	11303681	ENSMUSG00000048960	0.3910	+	Prex2	protein_coding	2.06e-19	4.16e-17	-7.28e+00	8.78e+00	2.50e-02	9.36e-01	1.08e-04	9.30e+00	8.95e+00	8.11e+00	3.38e-02	2.65e-02	1.48e-02	2.81e+00	0.00e+00	0.00e+00	3.23e-04	0.00e+00	0.00e+00
chr12	72101292	72185029	ENSMUSG00000021086	0.4139	-	Ccdc175	protein_coding	2.89e-19	5.77e-17	-7.93e+00	7.92e+00	1.78e-01	0.00e+00	0.00e+00	7.70e+00	7.89e+00	8.16e+00	1.51e-01	1.73e-01	2.08e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	108950003	108950541	ENSMUSG00000103754	0.5566	-	Gm37284	TEC	3.48e-19	6.80e-17	-8.01e+00	7.98e+00	2.05e-01	0.00e+00	0.00e+00	8.43e+00	7.69e+00	7.81e+00	2.74e-01	1.64e-01	1.79e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	137518548	137527935	ENSMUSG00000029714	0.5839	+	Gigyf1	protein_coding	3.48e-19	6.80e-17	-6.82e+00	1.02e+01	2.46e-01	3.37e+00	1.97e-03	9.83e+00	1.03e+01	1.04e+01	1.92e-01	2.57e-01	2.89e-01	3.32e+00	3.32e+00	3.46e+00	1.90e-03	1.90e-03	2.11e-03
chr11	78176711	78181909	ENSMUSG00000019437	0.5266	+	Tlcd1	protein_coding	4.02e-19	7.78e-17	-6.81e+00	1.04e+01	3.89e-01	3.42e+00	3.19e-03	1.04e+01	1.04e+01	1.05e+01	3.87e-01	3.84e-01	3.96e-01	4.25e+00	2.32e+00	3.70e+00	5.06e-03	1.12e-03	3.37e-03
chr7	29953621	29965711	ENSMUSG00000063623	0.4614	+	C230062I16Rik	processed_transcript	4.97e-19	9.50e-17	-6.62e+00	1.13e+01	6.94e-01	4.70e+00	6.80e-03	1.16e+01	1.10e+01	1.14e+01	8.28e-01	5.25e-01	7.30e-01	4.09e+00	5.00e+00	5.00e+00	4.19e-03	8.11e-03	8.11e-03
chr8	94674894	94696278	ENSMUSG00000031775	0.5041	-	Pllp	protein_coding	5.60e-19	1.06e-16	-7.46e+00	8.18e+00	1.16e-01	5.28e-01	2.64e-04	7.97e+00	8.47e+00	8.10e+00	9.91e-02	1.40e-01	1.08e-01	1.58e+00	0.00e+00	0.00e+00	7.93e-04	0.00e+00	0.00e+00
chr9	106463962	106465938	ENSMUSG00000091735	0.6297	-	Gpr62	protein_coding	6.59e-19	1.22e-16	-7.93e+00	7.90e+00	1.44e-01	0.00e+00	0.00e+00	7.55e+00	8.29e+00	7.85e+00	1.11e-01	1.84e-01	1.36e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	3280627	3303526	ENSMUSG00000091119	0.3855	-	Ccdc152	protein_coding	6.60e-19	1.22e-16	-7.99e+00	7.98e+00	2.02e-01	0.00e+00	0.00e+00	8.17e+00	7.73e+00	8.03e+00	2.30e-01	1.69e-01	2.08e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	104794836	104818563	ENSMUSG00000002227	0.4862	-	Mov10	protein_coding	6.70e-19	1.23e-16	-6.61e+00	1.18e+01	1.39e-01	5.11e+00	1.38e-03	1.19e+01	1.15e+01	1.19e+01	1.51e-01	1.17e-01	1.49e-01	5.61e+00	4.81e+00	4.91e+00	1.91e-03	1.08e-03	1.16e-03
chr6	42358487	42373268	ENSMUSG00000029859	0.4893	-	Epha1	protein_coding	7.27e-19	1.32e-16	-6.74e+00	9.90e+00	3.43e-01	3.11e+00	2.87e-03	1.00e+01	9.81e+00	9.87e+00	3.74e-01	3.21e-01	3.36e-01	3.17e+00	2.58e+00	3.58e+00	2.87e-03	1.79e-03	3.94e-03
chr13	55325168	55329758	ENSMUSG00000021485	0.5450	-	Mxd3	protein_coding	7.93e-19	1.43e-16	-6.77e+00	9.71e+00	4.48e-01	2.90e+00	3.57e-03	9.54e+00	9.77e+00	9.81e+00	3.99e-01	4.66e-01	4.78e-01	2.81e+00	2.58e+00	3.32e+00	3.21e-03	2.68e-03	4.82e-03
chr5	115097689	115098295	ENSMUSG00000072693	0.4168	-	Gm10401	protein_coding	8.12e-19	1.45e-16	-7.42e+00	8.16e+00	2.24e-01	6.67e-01	5.23e-04	8.00e+00	8.20e+00	8.27e+00	2.00e-01	2.30e-01	2.41e-01	1.00e+00	1.00e+00	0.00e+00	7.85e-04	7.85e-04	0.00e+00
chr17	24488783	24508905	ENSMUSG00000033597	0.5544	+	Caskin1	protein_coding	8.30e-19	1.46e-16	-8.00e+00	8.00e+00	8.66e-02	0.00e+00	0.00e+00	8.08e+00	7.88e+00	8.03e+00	9.17e-02	7.99e-02	8.83e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	101068983	101152370	ENSMUSG00000035275	0.4489	+	Raver2	protein_coding	8.48e-19	1.48e-16	-6.93e+00	9.25e+00	8.66e-02	1.86e+00	5.69e-04	9.13e+00	9.35e+00	9.28e+00	7.93e-02	9.27e-02	8.80e-02	0.00e+00	3.00e+00	2.58e+00	0.00e+00	9.95e-04	7.11e-04
chr4	41769467	41774247	ENSMUSG00000073888	0.5227	-	Ccl27a	protein_coding	1.25e-18	2.16e-16	-6.60e+00	1.10e+01	4.75e-01	4.37e+00	4.69e-03	1.10e+01	1.08e+01	1.13e+01	4.55e-01	4.06e-01	5.65e-01	4.00e+00	4.17e+00	4.95e+00	3.40e-03	3.86e-03	6.80e-03
chr5	24502757	24527202	ENSMUSG00000067724	0.4991	-	Gbx1	protein_coding	1.44e-18	2.47e-16	-7.59e+00	8.31e+00	1.04e-01	5.28e-01	2.16e-04	8.19e+00	8.08e+00	8.65e+00	9.43e-02	8.72e-02	1.30e-01	0.00e+00	0.00e+00	1.58e+00	0.00e+00	0.00e+00	6.48e-04
chr5	90891241	90893115	ENSMUSG00000029380	0.4464	+	Cxcl1	protein_coding	1.61e-18	2.72e-16	-6.89e+00	9.99e+00	5.57e-01	2.87e+00	4.15e-03	9.66e+00	1.00e+01	1.03e+01	4.38e-01	5.60e-01	6.73e-01	3.70e+00	1.58e+00	3.32e+00	6.50e-03	1.08e-03	4.88e-03
chr10	93540632	93584327	ENSMUSG00000036168	0.4470	+	Ccdc38	protein_coding	1.62e-18	2.72e-16	-7.77e+00	7.68e+00	3.89e-02	0.00e+00	0.00e+00	7.58e+00	7.12e+00	8.34e+00	3.41e-02	2.47e-02	5.79e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	78439668	78468634	ENSMUSG00000016942	0.5308	-	Tmprss6	protein_coding	1.66e-18	2.77e-16	-7.20e+00	8.19e+00	1.63e-01	8.62e-01	5.56e-04	8.40e+00	8.19e+00	7.99e+00	1.87e-01	1.62e-01	1.41e-01	1.00e+00	0.00e+00	1.58e+00	5.56e-04	0.00e+00	1.11e-03
chr7	120658731	120670343	ENSMUSG00000030887	0.4401	-	Pdzd9	protein_coding	1.72e-18	2.84e-16	-7.73e+00	7.73e+00	5.40e-02	0.00e+00	0.00e+00	7.54e+00	7.82e+00	7.82e+00	4.72e-02	5.74e-02	5.74e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	26916367	26920183	ENSMUSG00000014873	0.5258	+	Surf2	protein_coding	2.62e-18	4.29e-16	-6.50e+00	1.09e+01	1.19e+00	4.35e+00	1.25e-02	1.10e+01	1.08e+01	1.10e+01	1.23e+00	1.10e+00	1.25e+00	4.95e+00	4.00e+00	4.09e+00	1.85e-02	9.24e-03	9.85e-03
chr3	28807205	28813985	ENSMUSG00000104444	0.4150	-	Gm33051	antisense	3.09e-18	5.02e-16	-7.65e+00	7.63e+00	1.59e-01	0.00e+00	0.00e+00	7.34e+00	7.78e+00	7.77e+00	1.28e-01	1.75e-01	1.74e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr13	3566036	3611108	ENSMUSG00000033799	0.3807	-	Fam208b	protein_coding	3.69e-18	5.93e-16	-6.64e+00	9.04e+00	2.82e-01	2.41e+00	2.30e-03	9.26e+00	9.00e+00	8.86e+00	3.26e-01	2.72e-01	2.47e-01	2.32e+00	2.58e+00	2.32e+00	2.13e-03	2.66e-03	2.13e-03
chr11	101339660	101347939	ENSMUSG00000101925	0.4345	-	Gm28156	antisense	4.02e-18	6.38e-16	-7.51e+00	7.40e+00	1.44e-01	0.00e+00	0.00e+00	6.64e+00	7.98e+00	7.59e+00	7.89e-02	2.00e-01	1.53e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	71795795	72034227	ENSMUSG00000079022	0.4426	-	Col22a1	protein_coding	4.04e-18	6.38e-16	-7.19e+00	7.90e+00	2.83e-02	6.67e-01	7.75e-05	8.03e+00	8.20e+00	7.45e+00	3.03e-02	3.42e-02	2.02e-02	1.00e+00	0.00e+00	1.00e+00	1.16e-04	0.00e+00	1.16e-04
chr17	25786580	25790513	ENSMUSG00000071202	0.5399	+	Ccdc78	protein_coding	4.30e-18	6.73e-16	-7.50e+00	7.92e+00	1.55e-01	3.33e-01	2.14e-04	8.03e+00	7.85e+00	7.87e+00	1.68e-01	1.47e-01	1.50e-01	1.00e+00	0.00e+00	0.00e+00	6.43e-04	0.00e+00	0.00e+00
chr12	79130777	79156301	ENSMUSG00000021125	0.4294	+	Arg2	protein_coding	5.07e-18	7.88e-16	-7.72e+00	7.72e+00	1.38e-01	0.00e+00	0.00e+00	7.71e+00	7.61e+00	7.83e+00	1.37e-01	1.27e-01	1.48e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	43427019	43429134	ENSMUSG00000042788	0.5425	-	Fam166b	protein_coding	5.50e-18	8.47e-16	-7.66e+00	7.66e+00	4.95e-02	0.00e+00	0.00e+00	7.67e+00	7.62e+00	7.69e+00	4.98e-02	4.81e-02	5.06e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	78850862	78855529	ENSMUSG00000043501	0.5120	-	Lgals2	protein_coding	7.03e-18	1.07e-15	-7.83e+00	7.82e+00	1.62e-01	0.00e+00	0.00e+00	7.89e+00	7.55e+00	8.01e+00	1.69e-01	1.33e-01	1.84e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	35371546	35931228	ENSMUSG00000037646	0.3916	+	Vps13b	protein_coding	7.22e-18	1.09e-15	-6.39e+00	1.00e+01	4.46e-01	3.60e+00	4.90e-03	1.01e+01	9.85e+00	1.02e+01	4.64e-01	3.86e-01	4.87e-01	3.81e+00	4.00e+00	3.00e+00	5.46e-03	6.30e-03	2.94e-03
chr7	45233632	45239115	ENSMUSG00000030798	0.5450	-	Cd37	protein_coding	1.05e-17	1.57e-15	-7.71e+00	7.71e+00	4.23e-02	0.00e+00	0.00e+00	7.81e+00	7.67e+00	7.64e+00	4.56e-02	4.11e-02	4.03e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	45481877	45523632	ENSMUSG00000023467	0.4946	+	Tulp2	protein_coding	1.21e-17	1.80e-15	-7.75e+00	7.75e+00	3.03e-02	0.00e+00	0.00e+00	7.61e+00	7.87e+00	7.76e+00	2.74e-02	3.29e-02	3.05e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	94644996	94653964	ENSMUSG00000039055	0.4822	-	Eme1	protein_coding	1.36e-17	2.01e-15	-7.67e+00	7.65e+00	3.71e-02	0.00e+00	0.00e+00	7.92e+00	7.61e+00	7.42e+00	4.42e-02	3.58e-02	3.12e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	35994453	36038435	ENSMUSG00000092368	0.4683	+	A930015D03Rik	antisense	2.41e-17	3.53e-15	-7.67e+00	7.66e+00	1.61e-01	0.00e+00	0.00e+00	7.75e+00	7.55e+00	7.69e+00	1.71e-01	1.48e-01	1.63e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	149144263	149153540	ENSMUSG00000107388	0.4528	+	Gm42788	lincRNA	2.53e-17	3.67e-15	-7.74e+00	7.73e+00	1.70e-01	0.00e+00	0.00e+00	7.97e+00	7.72e+00	7.50e+00	1.99e-01	1.67e-01	1.44e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	88328655	88336148	ENSMUSG00000001420	0.5149	-	Tmem79	protein_coding	3.01e-17	4.32e-15	-7.49e+00	7.49e+00	5.02e-02	0.00e+00	0.00e+00	7.57e+00	7.53e+00	7.38e+00	5.29e-02	5.15e-02	4.62e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69655314	69656727	ENSMUSG00000041287	0.5750	+	Sox15	protein_coding	3.02e-17	4.32e-15	-7.74e+00	7.70e+00	1.56e-01	0.00e+00	0.00e+00	7.43e+00	7.53e+00	8.14e+00	1.26e-01	1.35e-01	2.07e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	97048691	97051432	ENSMUSG00000085262	0.5255	-	Gm11574	processed_transcript	3.25e-17	4.62e-15	-7.35e+00	7.76e+00	1.73e-01	3.33e-01	2.66e-04	7.86e+00	7.63e+00	7.80e+00	1.85e-01	1.57e-01	1.77e-01	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	0.00e+00
chr16	58468125	58524243	ENSMUSG00000022747	0.4252	-	St3gal6	protein_coding	4.66e-17	6.57e-15	-6.97e+00	7.96e+00	2.46e-02	6.67e-01	9.88e-05	7.83e+00	7.95e+00	8.11e+00	2.23e-02	2.43e-02	2.73e-02	0.00e+00	2.00e+00	0.00e+00	0.00e+00	2.96e-04	0.00e+00
chr4	117866524	117872557	ENSMUSG00000078588	0.5474	-	Ccdc24	protein_coding	5.37e-17	7.50e-15	-7.32e+00	7.65e+00	2.59e-02	3.33e-01	4.06e-05	8.18e+00	7.83e+00	6.93e+00	3.53e-02	2.77e-02	1.47e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	1.22e-04
chr11	69964779	69967885	ENSMUSG00000018569	0.5848	+	Cldn7	protein_coding	6.66e-17	9.23e-15	-7.57e+00	7.51e+00	6.90e-02	0.00e+00	0.00e+00	7.29e+00	7.19e+00	8.07e+00	5.65e-02	5.29e-02	9.74e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	120489406	120492394	ENSMUSG00000086929	0.5490	-	Gm11788	antisense	7.37e-17	1.01e-14	-7.58e+00	7.57e+00	1.52e-01	0.00e+00	0.00e+00	7.81e+00	7.30e+00	7.59e+00	1.78e-01	1.25e-01	1.53e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	5406740	5422847	ENSMUSG00000086938	0.4815	+	4930481A15Rik	antisense	1.08e-16	1.47e-14	-6.02e+00	9.28e+00	1.62e-01	2.83e+00	2.24e-03	9.46e+00	9.07e+00	9.31e+00	1.82e-01	1.39e-01	1.64e-01	2.58e+00	4.32e+00	1.58e+00	1.29e-03	4.92e-03	5.17e-04
chr10	86055125	86498896	ENSMUSG00000059602	0.4537	-	Syn3	protein_coding	1.12e-16	1.51e-14	-7.26e+00	7.67e+00	1.86e-02	3.33e-01	3.04e-05	7.69e+00	7.46e+00	7.85e+00	1.88e-02	1.60e-02	2.10e-02	1.00e+00	0.00e+00	0.00e+00	9.12e-05	0.00e+00	0.00e+00
chr11	82035571	82037453	ENSMUSG00000035385	0.4376	+	Ccl2	protein_coding	1.23e-16	1.66e-14	-6.06e+00	1.20e+01	2.60e+00	5.68e+00	3.84e-02	1.20e+01	1.21e+01	1.18e+01	2.66e+00	2.80e+00	2.34e+00	6.75e+00	5.32e+00	4.95e+00	7.00e-02	2.55e-02	1.96e-02
chrX	134588149	134601125	ENSMUSG00000031266	0.4258	-	Gla	protein_coding	1.75e-16	2.34e-14	-5.97e+00	1.01e+01	2.57e-01	4.02e+00	3.86e-03	9.99e+00	9.92e+00	1.03e+01	2.40e-01	2.28e-01	3.02e-01	3.46e+00	4.70e+00	3.91e+00	2.37e-03	5.92e-03	3.31e-03
chr14	55618037	55625395	ENSMUSG00000002324	0.5205	+	Rec8	protein_coding	1.94e-16	2.57e-14	-7.54e+00	7.54e+00	4.88e-02	0.00e+00	0.00e+00	7.67e+00	7.36e+00	7.58e+00	5.35e-02	4.29e-02	5.01e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	95296096	95307176	ENSMUSG00000015702	0.4791	-	Anxa9	protein_coding	1.97e-16	2.59e-14	-7.28e+00	7.68e+00	6.42e-02	3.33e-01	1.04e-04	7.90e+00	7.70e+00	7.43e+00	7.43e-02	6.46e-02	5.37e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	3.12e-04
chr2	155775342	155818366	ENSMUSG00000027612	0.4902	+	Mmp24	protein_coding	3.03e-16	3.94e-14	-7.51e+00	7.51e+00	3.76e-02	0.00e+00	0.00e+00	7.64e+00	7.36e+00	7.53e+00	4.10e-02	3.38e-02	3.81e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	5092871	5098418	ENSMUSG00000024873	0.5624	-	Cnih2	protein_coding	3.04e-16	3.94e-14	-6.85e+00	7.85e+00	1.24e-01	8.62e-01	5.40e-04	7.90e+00	7.83e+00	7.81e+00	1.28e-01	1.23e-01	1.21e-01	0.00e+00	1.58e+00	1.00e+00	0.00e+00	1.08e-03	5.40e-04
chr7	141633456	141655319	ENSMUSG00000048191	0.5300	-	Muc6	protein_coding	3.88e-16	5.00e-14	-7.40e+00	7.39e+00	8.33e-02	0.00e+00	0.00e+00	7.46e+00	7.18e+00	7.54e+00	8.68e-02	7.14e-02	9.18e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	116410077	116461178	ENSMUSG00000025701	0.4476	-	Alox5	protein_coding	4.02e-16	5.14e-14	-7.23e+00	7.62e+00	2.93e-02	3.33e-01	4.92e-05	7.33e+00	7.53e+00	7.98e+00	2.36e-02	2.72e-02	3.72e-02	1.00e+00	0.00e+00	0.00e+00	1.48e-04	0.00e+00	0.00e+00
chr19	5845623	5851388	ENSMUSG00000043488	0.5309	+	Frmd8os	antisense	4.39e-16	5.58e-14	-7.23e+00	7.57e+00	1.56e-01	3.33e-01	2.62e-04	8.20e+00	7.27e+00	7.24e+00	2.31e-01	1.20e-01	1.18e-01	1.00e+00	0.00e+00	0.00e+00	7.87e-04	0.00e+00	0.00e+00
chr16	56477846	56690128	ENSMUSG00000035258	0.3922	+	Abi3bp	protein_coding	4.62e-16	5.83e-14	-7.36e+00	7.33e+00	6.99e-02	0.00e+00	0.00e+00	7.66e+00	7.34e+00	7.00e+00	8.62e-02	6.90e-02	5.44e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	97673031	97674694	ENSMUSG00000090441	0.4189	-	Gm17651	protein_coding	4.76e-16	5.93e-14	-7.09e+00	7.06e+00	1.08e-01	0.00e+00	0.00e+00	7.17e+00	7.36e+00	6.64e+00	1.14e-01	1.30e-01	7.89e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	51584757	51604489	ENSMUSG00000020359	0.4734	+	Phykpl	protein_coding	4.76e-16	5.93e-14	-5.85e+00	1.08e+01	1.14e-01	4.85e+00	1.90e-03	1.06e+01	1.09e+01	1.07e+01	1.03e-01	1.28e-01	1.09e-01	4.95e+00	4.32e+00	5.29e+00	1.97e-03	1.25e-03	2.50e-03
chr5	48389502	49524907	ENSMUSG00000029088	0.3778	-	Kcnip4	protein_coding	5.00e-16	6.19e-14	-7.46e+00	7.43e+00	4.49e-02	0.00e+00	0.00e+00	7.13e+00	7.32e+00	7.85e+00	3.55e-02	4.06e-02	5.85e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	85575676	85577295	ENSMUSG00000094127	0.4617	+	G530012D18Rik	protein_coding	5.68e-16	6.97e-14	-7.35e+00	7.29e+00	1.30e-01	0.00e+00	0.00e+00	6.69e+00	7.53e+00	7.67e+00	8.13e-02	1.47e-01	1.61e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	26195999	26199087	ENSMUSG00000024184	0.5458	-	Pdia2	protein_coding	6.68e-16	8.14e-14	-7.36e+00	7.31e+00	6.29e-02	0.00e+00	0.00e+00	6.95e+00	7.81e+00	7.17e+00	4.75e-02	8.61e-02	5.52e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	5058128	5060385	ENSMUSG00000034209	0.5735	+	Rasl10a	protein_coding	8.36e-16	1.01e-13	-7.13e+00	7.53e+00	1.18e-01	3.33e-01	2.11e-04	7.78e+00	7.28e+00	7.54e+00	1.39e-01	9.77e-02	1.17e-01	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	6.34e-04
chr13	55464267	55473155	ENSMUSG00000034686	0.5631	+	Prr7	protein_coding	8.74e-16	1.05e-13	-6.07e+00	8.79e+00	3.16e-01	2.71e+00	3.99e-03	8.76e+00	9.09e+00	8.52e+00	3.05e-01	3.83e-01	2.59e-01	2.81e+00	2.32e+00	3.00e+00	4.23e-03	2.82e-03	4.93e-03
chr11	29526408	29545279	ENSMUSG00000020459	0.3929	+	Mtif2	protein_coding	1.09e-15	1.30e-13	-5.76e+00	1.19e+01	5.09e-01	6.19e+00	9.24e-03	1.19e+01	1.17e+01	1.22e+01	4.93e-01	4.22e-01	6.13e-01	6.29e+00	6.21e+00	6.09e+00	9.84e-03	9.33e-03	8.56e-03
chr5	115333239	115341178	ENSMUSG00000029536	0.4571	-	Gatc	protein_coding	1.12e-15	1.33e-13	-5.80e+00	9.60e+00	3.11e-01	3.74e+00	5.22e-03	1.00e+01	9.37e+00	9.40e+00	4.11e-01	2.59e-01	2.64e-01	3.00e+00	3.91e+00	4.32e+00	2.74e-03	5.48e-03	7.44e-03
chr3	95236920	95241598	ENSMUSG00000068860	0.5012	-	Gm128	protein_coding	1.30e-15	1.54e-13	-7.35e+00	7.34e+00	1.05e-01	0.00e+00	0.00e+00	7.22e+00	7.18e+00	7.61e+00	9.59e-02	9.33e-02	1.26e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	25242659	25256364	ENSMUSG00000047507	0.5719	-	Baiap3	protein_coding	1.48e-15	1.73e-13	-7.33e+00	7.29e+00	2.66e-02	0.00e+00	0.00e+00	7.38e+00	6.87e+00	7.64e+00	2.75e-02	1.93e-02	3.30e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	43566928	43578873	ENSMUSG00000028467	0.5073	-	Gba2	protein_coding	1.51e-15	1.76e-13	-5.94e+00	8.95e+00	9.66e-02	2.93e+00	1.39e-03	9.27e+00	8.45e+00	9.14e+00	1.17e-01	6.59e-02	1.07e-01	3.32e+00	3.46e+00	2.00e+00	1.71e-03	1.90e-03	5.69e-04
chr19	45026906	45046614	ENSMUSG00000074818	0.5288	-	Pdzd7	protein_coding	1.89e-15	2.19e-13	-7.20e+00	7.18e+00	7.42e-02	0.00e+00	0.00e+00	6.92e+00	7.49e+00	7.12e+00	6.11e-02	9.12e-02	7.03e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	30888694	30906965	ENSMUSG00000029165	0.4870	+	Agbl5	protein_coding	2.18e-15	2.51e-13	-5.94e+00	9.77e+00	7.64e-02	3.56e+00	1.16e-03	9.62e+00	9.28e+00	1.04e+01	6.55e-02	5.16e-02	1.12e-01	4.17e+00	2.00e+00	4.52e+00	1.41e-03	2.49e-04	1.83e-03
chr6	48847659	48863107	ENSMUSG00000107597	0.4503	-	Gm44764	processed_transcript	2.34e-15	2.67e-13	-7.67e+00	7.59e+00	8.08e-02	0.00e+00	0.00e+00	8.22e+00	7.47e+00	7.09e+00	1.18e-01	7.02e-02	5.38e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	135963727	135968178	ENSMUSG00000028671	0.5833	+	Gale	protein_coding	2.35e-15	2.67e-13	-6.07e+00	8.71e+00	9.87e-02	2.55e+00	1.24e-03	8.35e+00	8.73e+00	9.04e+00	7.58e-02	9.86e-02	1.22e-01	3.32e+00	2.00e+00	2.32e+00	2.09e-03	6.98e-04	9.30e-04
chr11	69396519	69398234	ENSMUSG00000045377	0.5606	-	Tmem88	protein_coding	2.65e-15	2.99e-13	-6.63e+00	7.84e+00	9.79e-02	7.74e-01	5.68e-04	7.67e+00	7.92e+00	7.94e+00	8.65e-02	1.03e-01	1.04e-01	2.32e+00	0.00e+00	0.00e+00	1.70e-03	0.00e+00	0.00e+00
chr4	46038935	46116032	ENSMUSG00000028328	0.4920	+	Tmod1	protein_coding	2.93e-15	3.29e-13	-5.86e+00	8.80e+00	8.18e-02	2.90e+00	1.23e-03	8.81e+00	8.71e+00	8.86e+00	8.27e-02	7.71e-02	8.56e-02	2.58e+00	3.32e+00	2.81e+00	9.20e-04	1.66e-03	1.10e-03
chr10	79860475	79874634	ENSMUSG00000035835	0.5350	-	Plppr3	protein_coding	3.17e-15	3.53e-13	-6.08e+00	8.66e+00	5.28e-02	2.01e+00	6.54e-04	8.66e+00	8.74e+00	8.58e+00	5.28e-02	5.57e-02	4.98e-02	3.46e+00	0.00e+00	2.58e+00	1.31e-03	0.00e+00	6.54e-04
chr14	46379414	46383608	ENSMUSG00000079261	0.4923	+	Gm15217	protein_coding	3.25e-15	3.60e-13	-6.42e+00	7.82e+00	1.50e-01	1.39e+00	1.10e-03	8.10e+00	7.71e+00	7.66e+00	1.80e-01	1.38e-01	1.32e-01	1.58e+00	1.00e+00	1.58e+00	1.32e-03	6.58e-04	1.32e-03
chr9	109057933	109059734	ENSMUSG00000049734	0.5766	-	Trex1	protein_coding	3.37e-15	3.71e-13	-5.69e+00	9.53e+00	5.71e-01	3.69e+00	1.03e-02	9.32e+00	9.66e+00	9.60e+00	4.92e-01	6.24e-01	5.96e-01	4.46e+00	3.81e+00	2.81e+00	1.62e-02	1.00e-02	4.62e-03
chr2	22895522	22940266	ENSMUSG00000026784	0.3960	+	Pdss1	protein_coding	3.68e-15	4.03e-13	-7.17e+00	7.14e+00	1.34e-02	0.00e+00	0.00e+00	6.79e+00	7.49e+00	7.13e+00	1.03e-02	1.68e-02	1.31e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	21405242	21411720	ENSMUSG00000097665	0.4893	-	Gm16853	antisense	3.82e-15	4.16e-13	-7.12e+00	7.11e+00	1.10e-01	0.00e+00	0.00e+00	7.37e+00	6.88e+00	7.07e+00	1.31e-01	9.33e-02	1.06e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr14	13918444	13949558	ENSMUSG00000079357	0.4247	+	Gm11100	antisense	4.29e-15	4.64e-13	-7.22e+00	7.18e+00	1.18e-01	0.00e+00	0.00e+00	7.13e+00	7.61e+00	6.79e+00	1.11e-01	1.56e-01	8.77e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr13	28943048	28951671	ENSMUSG00000097461	0.4381	+	Gm26735	lincRNA	4.83e-15	5.20e-13	-7.41e+00	7.36e+00	1.35e-01	0.00e+00	0.00e+00	6.85e+00	7.41e+00	7.81e+00	9.09e-02	1.35e-01	1.79e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	116551740	116552627	ENSMUSG00000087299	0.4077	+	Gm12953	antisense	5.51e-15	5.89e-13	-6.82e+00	7.60e+00	1.79e-01	1.00e+00	7.97e-04	7.48e+00	6.70e+00	8.63e+00	1.41e-01	8.21e-02	3.14e-01	1.00e+00	1.00e+00	1.00e+00	7.97e-04	7.97e-04	7.97e-04
chr17	23660523	23668610	ENSMUSG00000043782	0.5378	+	Ccdc64b	protein_coding	5.84e-15	6.20e-13	-7.24e+00	7.24e+00	9.40e-02	0.00e+00	0.00e+00	7.11e+00	7.19e+00	7.41e+00	8.56e-02	9.06e-02	1.06e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	23761753	23849158	ENSMUSG00000026156	0.4316	+	B3gat2	protein_coding	6.36e-15	6.72e-13	-7.15e+00	7.15e+00	2.11e-02	0.00e+00	0.00e+00	7.19e+00	7.27e+00	6.99e+00	2.17e-02	2.29e-02	1.89e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	121204433	121222655	ENSMUSG00000039307	0.4815	+	Hexdc	protein_coding	6.73e-15	7.07e-13	-6.36e+00	7.94e+00	4.60e-02	1.53e+00	3.74e-04	8.00e+00	7.78e+00	8.05e+00	4.76e-02	4.09e-02	4.93e-02	1.58e+00	1.00e+00	2.00e+00	3.74e-04	1.87e-04	5.61e-04
chr2	118388618	118475234	ENSMUSG00000005102	0.4479	+	Eif2ak4	protein_coding	7.83e-15	8.18e-13	-5.56e+00	9.61e+00	1.32e-01	4.00e+00	2.64e-03	9.45e+00	9.52e+00	9.85e+00	1.17e-01	1.24e-01	1.55e-01	3.70e+00	4.58e+00	3.70e+00	2.02e-03	3.88e-03	2.02e-03
chr6	125145241	125161782	ENSMUSG00000038271	0.5355	+	Iffo1	protein_coding	8.07e-15	8.38e-13	-5.81e+00	9.10e+00	6.51e-02	3.29e+00	1.05e-03	9.14e+00	8.72e+00	9.44e+00	6.57e-02	4.89e-02	8.06e-02	3.17e+00	3.00e+00	3.70e+00	9.31e-04	8.14e-04	1.40e-03
chr11	100713850	100714575	ENSMUSG00000017832	0.5978	+	Hspb9	protein_coding	9.98e-15	1.03e-12	-7.25e+00	7.23e+00	1.34e-01	0.00e+00	0.00e+00	7.22e+00	6.92e+00	7.54e+00	1.32e-01	1.07e-01	1.64e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	24527241	24534210	ENSMUSG00000079657	0.5366	-	Rab26	protein_coding	1.07e-14	1.10e-12	-6.89e+00	7.30e+00	4.42e-02	3.33e-01	9.39e-05	7.25e+00	7.39e+00	7.27e+00	4.25e-02	4.71e-02	4.31e-02	0.00e+00	1.00e+00	0.00e+00	0.00e+00	2.82e-04	0.00e+00
chr11	69340461	69342641	ENSMUSG00000043419	0.4888	+	Chd3os	protein_coding	1.28e-14	1.31e-12	-5.69e+00	8.80e+00	1.66e-01	3.11e+00	2.86e-03	8.69e+00	8.91e+00	8.80e+00	1.54e-01	1.79e-01	1.66e-01	3.00e+00	3.17e+00	3.17e+00	2.61e-03	2.98e-03	2.98e-03
chr6	88503605	88504277	ENSMUSG00000107659	0.5721	+	Gm44170	antisense	1.71e-14	1.74e-12	-7.12e+00	7.10e+00	1.10e-01	0.00e+00	0.00e+00	6.83e+00	7.41e+00	7.07e+00	9.01e-02	1.35e-01	1.06e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	98571004	98589588	ENSMUSG00000022993	0.4567	+	4930415O20Rik	protein_coding	2.45e-14	2.47e-12	-7.11e+00	7.08e+00	9.94e-02	0.00e+00	0.00e+00	6.73e+00	7.11e+00	7.42e+00	7.60e-02	9.91e-02	1.23e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	180258540	180273496	ENSMUSG00000038990	0.5294	-	Cables2	protein_coding	2.53e-14	2.54e-12	-5.31e+00	1.02e+01	1.83e-01	4.87e+00	4.45e-03	1.03e+01	1.03e+01	1.01e+01	1.89e-01	1.89e-01	1.71e-01	5.04e+00	5.17e+00	4.39e+00	4.91e-03	5.37e-03	3.07e-03
chr11	115974709	116008412	ENSMUSG00000020758	0.5360	+	Itgb4	protein_coding	2.78e-14	2.77e-12	-5.98e+00	7.97e+00	3.81e-02	1.86e+00	4.56e-04	8.10e+00	7.99e+00	7.83e+00	4.15e-02	3.84e-02	3.43e-02	2.00e+00	2.58e+00	1.00e+00	4.56e-04	7.60e-04	1.52e-04
chr16	32475522	32487879	ENSMUSG00000035699	0.4808	-	Slc51a	protein_coding	2.79e-14	2.77e-12	-6.16e+00	7.73e+00	1.45e-01	9.36e-01	1.36e-03	7.86e+00	7.91e+00	7.42e+00	1.57e-01	1.62e-01	1.15e-01	0.00e+00	0.00e+00	2.81e+00	0.00e+00	0.00e+00	4.07e-03
chr2	131127280	131146321	ENSMUSG00000074793	0.5138	+	Hspa12b	protein_coding	3.22e-14	3.18e-12	-6.47e+00	7.45e+00	1.20e-02	8.62e-01	6.83e-05	7.71e+00	7.19e+00	7.45e+00	1.43e-02	9.91e-03	1.19e-02	1.58e+00	1.00e+00	0.00e+00	1.37e-04	6.83e-05	0.00e+00
chr1	181576559	181815774	ENSMUSG00000047369	0.4257	+	Dnah14	protein_coding	3.44e-14	3.38e-12	-6.52e+00	7.73e+00	2.37e-02	7.74e-01	1.48e-04	7.54e+00	7.64e+00	8.01e+00	2.06e-02	2.21e-02	2.84e-02	0.00e+00	0.00e+00	2.32e+00	0.00e+00	0.00e+00	4.44e-04
chr7	126847416	126852705	ENSMUSG00000052301	0.5864	+	Doc2a	protein_coding	3.57e-14	3.48e-12	-7.14e+00	7.12e+00	1.91e-02	0.00e+00	0.00e+00	6.86e+00	7.17e+00	7.34e+00	1.57e-02	1.95e-02	2.20e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	113631649	113633144	ENSMUSG00000097671	0.5107	-	1700015O11Rik	lincRNA	4.07e-14	3.95e-12	-6.85e+00	6.80e+00	9.09e-02	0.00e+00	0.00e+00	6.92e+00	7.17e+00	6.32e+00	9.57e-02	1.14e-01	6.30e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	108337089	108338273	ENSMUSG00000104208	0.4160	-	Gm37401	antisense	4.32e-14	4.18e-12	-5.88e+00	8.10e+00	2.19e-01	2.06e+00	2.92e-03	7.97e+00	8.14e+00	8.20e+00	1.99e-01	2.25e-01	2.34e-01	2.58e+00	1.00e+00	2.58e+00	3.99e-03	7.97e-04	3.99e-03
chr5	122323223	122354233	ENSMUSG00000038569	0.4535	-	Rad9b	protein_coding	4.89e-14	4.70e-12	-6.38e+00	7.78e+00	3.43e-02	8.62e-01	2.58e-04	7.46e+00	7.92e+00	7.95e+00	2.71e-02	3.75e-02	3.83e-02	0.00e+00	0.00e+00	2.58e+00	0.00e+00	0.00e+00	7.74e-04
chr2	32925216	32961614	ENSMUSG00000026792	0.5183	-	Lrsam1	protein_coding	5.47e-14	5.24e-12	-5.37e+00	9.77e+00	4.88e-02	4.41e+00	1.13e-03	9.57e+00	9.69e+00	1.00e+01	4.23e-02	4.57e-02	5.84e-02	4.39e+00	4.32e+00	4.52e+00	1.11e-03	1.05e-03	1.22e-03
chr11	102835849	102838040	ENSMUSG00000020928	0.5192	+	Higd1b	protein_coding	6.20e-14	5.90e-12	-7.04e+00	7.02e+00	9.86e-02	0.00e+00	0.00e+00	6.69e+00	7.34e+00	7.02e+00	7.70e-02	1.22e-01	9.74e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	129608331	129614257	ENSMUSG00000078552	0.5205	-	Dcdc2b	protein_coding	6.76e-14	6.39e-12	-6.43e+00	7.42e+00	1.03e-01	8.62e-01	5.98e-04	7.19e+00	7.51e+00	7.56e+00	8.68e-02	1.08e-01	1.13e-01	1.58e+00	1.00e+00	0.00e+00	1.20e-03	5.98e-04	0.00e+00
chr3	108555467	108556904	ENSMUSG00000105810	0.4103	+	Gm43435	TEC	6.80e-14	6.40e-12	-6.03e+00	7.87e+00	1.90e-01	1.83e+00	2.13e-03	7.40e+00	8.17e+00	8.03e+00	1.34e-01	2.30e-01	2.07e-01	2.32e+00	1.58e+00	1.58e+00	3.19e-03	1.59e-03	1.59e-03
chr11	102436981	102447682	ENSMUSG00000034685	0.5747	-	Fam171a2	protein_coding	7.06e-14	6.61e-12	-5.38e+00	1.28e+01	1.67e+00	7.33e+00	3.98e-02	1.29e+01	1.23e+01	1.31e+01	1.80e+00	1.19e+00	2.01e+00	7.49e+00	6.67e+00	7.83e+00	4.22e-02	2.38e-02	5.35e-02
chr2	126034658	126091185	ENSMUSG00000027208	0.4000	+	Fgf7	protein_coding	8.09e-14	7.53e-12	-6.47e+00	6.86e+00	2.83e-02	3.33e-01	8.07e-05	7.18e+00	6.82e+00	6.58e+00	3.48e-02	2.71e-02	2.30e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	2.42e-04
chr11	100627543	100692455	ENSMUSG00000014198	0.5052	-	Zfp385c	protein_coding	8.52e-14	7.90e-12	-6.94e+00	6.94e+00	1.93e-02	0.00e+00	0.00e+00	6.92e+00	7.06e+00	6.83e+00	1.90e-02	2.09e-02	1.79e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	113326972	113335068	ENSMUSG00000030271	0.4803	+	Ogg1	protein_coding	1.17e-13	1.08e-11	-5.28e+00	9.40e+00	8.57e-02	4.11e+00	2.08e-03	9.63e+00	9.08e+00	9.50e+00	9.92e-02	6.77e-02	9.02e-02	4.52e+00	4.00e+00	3.81e+00	2.75e-03	1.88e-03	1.63e-03
chr5	120476526	120483932	ENSMUSG00000029597	0.5308	+	Sds	protein_coding	1.34e-13	1.23e-11	-6.76e+00	7.13e+00	5.01e-02	3.33e-01	1.16e-04	6.66e+00	7.27e+00	7.48e+00	3.49e-02	5.34e-02	6.18e-02	0.00e+00	1.00e+00	0.00e+00	0.00e+00	3.49e-04	0.00e+00
chr10	128395934	128401224	ENSMUSG00000039878	0.5566	-	Slc39a5	protein_coding	1.40e-13	1.28e-11	-7.04e+00	7.02e+00	9.53e-02	0.00e+00	0.00e+00	7.16e+00	6.74e+00	7.17e+00	1.04e-01	7.75e-02	1.05e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	121981761	121989116	ENSMUSG00000108511	0.4496	+	Gm44987	antisense	1.59e-13	1.45e-11	-7.09e+00	7.06e+00	1.08e-01	0.00e+00	0.00e+00	6.74e+00	7.00e+00	7.43e+00	8.45e-02	1.01e-01	1.37e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00

Download the DEG result list for ML_vs_MU.
Download the whole result list for ML_vs_MU.

DEG table for the contrast CL_vs_CU

The following table presents the top 10% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast CL_vs_CU. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right.

chromosome	start	end	gene_id	gc_content	strand	gene_name	biotype	p-value_deseq	FDR_deseq	log2_normalized_fold_change_CL_vs_CU	log2_normalized_mean_counts_CL	rpgm_normalized_mean_counts_CL	log2_normalized_mean_counts_CU	rpgm_normalized_mean_counts_CU	log2_normalized_counts_GK3R164-CL1	log2_normalized_counts_GK3R165-CL2	log2_normalized_counts_GK3R166-CL3	rpgm_normalized_counts_GK3R164-CL1	rpgm_normalized_counts_GK3R165-CL2	rpgm_normalized_counts_GK3R166-CL3	log2_normalized_counts_GK3R146_CU1	log2_normalized_counts_GK3R147_CU2	log2_normalized_counts_GK3R148_CU3	rpgm_normalized_counts_GK3R146_CU1	rpgm_normalized_counts_GK3R147_CU2	rpgm_normalized_counts_GK3R148_CU3
chr10	81182605	81183849	ENSMUSG00000053603	0.5293	-	4930442H23Rik	protein_coding	7.46e-43	1.36e-38	-1.40e+01	1.44e+01	1.69e+01	3.33e-01	2.62e-04	1.45e+01	1.47e+01	1.39e+01	1.85e+01	2.03e+01	1.20e+01	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.87e-04
chr3	37714190	37724490	ENSMUSG00000058174	0.4589	-	Gm5148	protein_coding	4.95e-41	4.50e-37	-1.34e+01	1.34e+01	3.75e+00	0.00e+00	0.00e+00	1.37e+01	1.34e+01	1.31e+01	4.60e+00	3.70e+00	2.93e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	60302748	60696490	ENSMUSG00000012819	0.5079	-	Cdh23	protein_coding	2.11e-38	1.28e-34	-1.25e+01	1.24e+01	7.08e-01	0.00e+00	0.00e+00	1.17e+01	1.28e+01	1.28e+01	4.05e-01	8.53e-01	8.66e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	29376671	29388468	ENSMUSG00000058831	0.4835	-	Opn1sw	protein_coding	4.56e-37	2.07e-33	-1.18e+01	1.34e+01	2.18e+00	1.19e+00	3.97e-04	1.34e+01	1.36e+01	1.32e+01	2.12e+00	2.51e+00	1.91e+00	1.00e+00	0.00e+00	2.58e+00	1.99e-04	0.00e+00	9.93e-04
chr6	72953236	72957247	ENSMUSG00000097569	0.4743	+	Gm26640	lincRNA	1.09e-35	3.95e-32	-1.17e+01	1.16e+01	2.65e+00	0.00e+00	0.00e+00	1.22e+01	1.16e+01	1.12e+01	3.62e+00	2.45e+00	1.87e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	28881422	28893563	ENSMUSG00000054083	0.5460	+	Capn12	protein_coding	1.72e-33	4.56e-30	-1.11e+01	1.15e+01	9.22e-01	3.33e-01	1.08e-04	1.12e+01	1.14e+01	1.18e+01	7.59e-01	8.75e-01	1.13e+00	1.00e+00	0.00e+00	0.00e+00	3.24e-04	0.00e+00	0.00e+00
chr7	127982570	127984881	ENSMUSG00000097751	0.4010	-	Gm26690	lincRNA	1.76e-33	4.56e-30	-1.11e+01	1.10e+01	1.78e+00	0.00e+00	0.00e+00	1.17e+01	1.09e+01	1.04e+01	2.71e+00	1.57e+00	1.06e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	13172022	13200620	ENSMUSG00000038515	0.5033	-	Grtp1	protein_coding	3.48e-32	7.91e-29	-1.04e+01	1.20e+01	5.08e-01	1.53e+00	2.55e-04	1.20e+01	1.19e+01	1.20e+01	5.16e-01	5.01e-01	5.06e-01	1.58e+00	2.00e+00	1.00e+00	2.55e-04	3.82e-04	1.27e-04
chr2	121439059	121456781	ENSMUSG00000046110	0.4888	-	Serinc4	protein_coding	1.48e-31	2.99e-28	-1.07e+01	1.07e+01	8.62e-02	0.00e+00	0.00e+00	1.05e+01	1.08e+01	1.08e+01	7.73e-02	9.08e-02	9.07e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	71624417	71671757	ENSMUSG00000034799	0.5418	-	Unc13a	protein_coding	1.67e-31	3.04e-28	-1.04e+01	1.14e+01	1.57e-01	1.00e+00	5.94e-05	1.13e+01	1.12e+01	1.16e+01	1.45e-01	1.42e-01	1.84e-01	1.00e+00	1.00e+00	1.00e+00	5.94e-05	5.94e-05	5.94e-05
chr9	115909455	116076176	ENSMUSG00000056880	0.4482	+	Gadl1	protein_coding	7.72e-31	1.27e-27	-1.02e+01	1.12e+01	4.84e-01	6.67e-01	2.09e-04	1.14e+01	1.12e+01	1.09e+01	5.80e-01	4.78e-01	3.94e-01	2.00e+00	0.00e+00	0.00e+00	6.27e-04	0.00e+00	0.00e+00
chr1	74278550	74279624	ENSMUSG00000064272	0.6130	+	Gpbar1	protein_coding	2.70e-30	4.08e-27	-1.00e+01	1.12e+01	2.32e+00	1.19e+00	1.29e-03	1.13e+01	1.07e+01	1.16e+01	2.38e+00	1.59e+00	3.00e+00	1.58e+00	1.00e+00	1.00e+00	1.93e-03	9.67e-04	9.67e-04
chr17	39847113	39848035	ENSMUSG00000105361	0.5439	-	AY036118	lincRNA	1.51e-29	2.11e-26	-1.02e+01	1.01e+01	9.30e-01	0.00e+00	0.00e+00	9.34e+00	1.07e+01	1.01e+01	5.14e-01	1.37e+00	9.02e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	35062693	35066184	ENSMUSG00000073414	0.5284	-	G6b	protein_coding	5.13e-29	6.66e-26	-1.01e+01	9.94e+00	3.66e-01	0.00e+00	0.00e+00	1.07e+01	9.73e+00	9.38e+00	5.76e-01	2.94e-01	2.30e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	70868669	70934324	ENSMUSG00000047692	0.4390	+	4930533K18Rik	protein_coding	7.23e-29	8.76e-26	-1.00e+01	1.00e+01	2.63e-01	0.00e+00	0.00e+00	9.79e+00	1.01e+01	1.02e+01	2.21e-01	2.78e-01	2.89e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	143069153	143094642	ENSMUSG00000009246	0.5298	-	Trpm5	protein_coding	1.09e-28	1.24e-25	-9.98e+00	9.87e+00	8.61e-02	0.00e+00	0.00e+00	1.06e+01	9.77e+00	9.23e+00	1.33e-01	7.45e-02	5.13e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	113842601	113843116	ENSMUSG00000090458	0.5271	+	Gm17122	antisense	2.87e-28	3.07e-25	-9.90e+00	9.89e+00	7.63e-01	0.00e+00	0.00e+00	1.02e+01	9.82e+00	9.68e+00	9.15e-01	7.22e-01	6.53e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	50174444	50200115	ENSMUSG00000020381	0.4711	+	3010026O09Rik	protein_coding	4.11e-28	3.98e-25	-9.25e+00	1.15e+01	4.73e-01	1.80e+00	6.09e-04	1.16e+01	1.16e+01	1.12e+01	4.99e-01	5.20e-01	4.00e-01	2.81e+00	2.58e+00	0.00e+00	9.97e-04	8.31e-04	0.00e+00
chr8	3567990	3584939	ENSMUSG00000065952	0.4553	+	C330021F23Rik	protein_coding	4.17e-28	3.98e-25	-9.91e+00	9.86e+00	2.16e-01	0.00e+00	0.00e+00	9.48e+00	9.71e+00	1.04e+01	1.60e-01	1.88e-01	2.99e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	140898945	140900446	ENSMUSG00000025488	0.5360	-	Cox8b	protein_coding	5.76e-28	5.24e-25	-9.79e+00	9.76e+00	6.82e-01	0.00e+00	0.00e+00	9.87e+00	1.01e+01	9.36e+00	7.22e-01	8.18e-01	5.05e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	66065176	66069719	ENSMUSG00000039452	0.5427	-	Snx22	protein_coding	9.36e-28	8.10e-25	-9.79e+00	9.75e+00	1.99e-01	0.00e+00	0.00e+00	9.26e+00	1.00e+01	9.93e+00	1.39e-01	2.39e-01	2.19e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	58652850	58743964	ENSMUSG00000074269	0.4395	-	Rec114	protein_coding	1.30e-27	1.07e-24	-9.39e+00	1.04e+01	5.16e-01	8.62e-01	3.85e-04	1.05e+01	1.02e+01	1.04e+01	5.68e-01	4.48e-01	5.32e-01	0.00e+00	1.00e+00	1.58e+00	0.00e+00	3.85e-04	7.69e-04
chr19	9985174	10001633	ENSMUSG00000037418	0.4892	-	Best1	protein_coding	2.04e-27	1.61e-24	-9.07e+00	1.09e+01	7.25e-01	1.46e+00	9.80e-04	1.08e+01	1.12e+01	1.09e+01	6.36e-01	8.41e-01	6.98e-01	2.81e+00	1.58e+00	0.00e+00	2.21e-03	7.35e-04	0.00e+00
chr3	90104132	90212048	ENSMUSG00000027939	0.4384	+	Nup210l	protein_coding	1.18e-26	8.94e-24	-9.52e+00	9.52e+00	5.73e-01	0.00e+00	0.00e+00	9.61e+00	9.50e+00	9.46e+00	6.09e-01	5.61e-01	5.47e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	29170210	29173976	ENSMUSG00000031493	0.6010	+	Ggn	protein_coding	1.55e-26	1.13e-23	-8.77e+00	1.12e+01	9.35e-01	2.46e+00	1.76e-03	1.17e+01	1.12e+01	1.07e+01	1.28e+00	9.10e-01	6.18e-01	2.58e+00	2.81e+00	2.00e+00	1.89e-03	2.26e-03	1.13e-03
chr12	17284721	17329359	ENSMUSG00000020566	0.4798	-	Atp6v1c2	protein_coding	3.04e-26	2.12e-23	-8.87e+00	1.05e+01	1.33e-01	9.36e-01	1.90e-04	1.06e+01	1.05e+01	1.03e+01	1.44e-01	1.35e-01	1.20e-01	2.81e+00	0.00e+00	0.00e+00	5.69e-04	0.00e+00	0.00e+00
chr15	100621342	100636865	ENSMUSG00000053559	0.4926	-	Smagp	protein_coding	5.78e-26	3.89e-23	-9.38e+00	9.36e+00	3.77e-01	0.00e+00	0.00e+00	9.12e+00	9.34e+00	9.62e+00	3.16e-01	3.67e-01	4.47e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	156872457	156887192	ENSMUSG00000027636	0.5173	-	Sla2	protein_coding	6.66e-26	4.32e-23	-9.35e+00	9.35e+00	2.02e-01	0.00e+00	0.00e+00	9.44e+00	9.27e+00	9.34e+00	2.15e-01	1.91e-01	2.00e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr16	5086291	5132481	ENSMUSG00000039457	0.5103	-	Ppl	protein_coding	1.19e-25	7.43e-23	-9.29e+00	9.19e+00	2.94e-01	0.00e+00	0.00e+00	9.87e+00	9.10e+00	8.61e+00	4.41e-01	2.58e-01	1.83e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	75450436	75474343	ENSMUSG00000033007	0.5347	+	Asic4	protein_coding	1.47e-25	8.88e-23	-9.24e+00	9.23e+00	3.06e-01	0.00e+00	0.00e+00	9.23e+00	9.33e+00	9.14e+00	3.05e-01	3.27e-01	2.87e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	120955351	121277197	ENSMUSG00000040936	0.4889	-	Ulk4	protein_coding	1.84e-25	1.08e-22	-8.33e+00	1.18e+01	7.81e-02	3.38e+00	2.21e-04	1.18e+01	1.14e+01	1.20e+01	8.03e-02	6.17e-02	9.21e-02	2.81e+00	3.32e+00	4.00e+00	1.33e-04	1.99e-04	3.32e-04
chr11	29743048	30026033	ENSMUSG00000044072	0.4117	-	Eml6	protein_coding	4.34e-25	2.46e-22	-8.36e+00	1.06e+01	9.06e-02	2.13e+00	2.16e-04	1.07e+01	1.03e+01	1.07e+01	9.55e-02	7.59e-02	1.00e-01	2.00e+00	1.58e+00	2.81e+00	1.77e-04	1.18e-04	3.54e-04
chr10	80879720	80899441	ENSMUSG00000059406	0.5335	+	Tmprss9	protein_coding	4.63e-25	2.55e-22	-9.30e+00	9.01e+00	4.64e-01	0.00e+00	0.00e+00	8.29e+00	8.48e+00	1.03e+01	2.30e-01	2.63e-01	9.01e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	16455721	16477728	ENSMUSG00000001988	0.5276	-	Npas1	protein_coding	6.43e-25	3.43e-22	-9.10e+00	9.08e+00	2.09e-01	0.00e+00	0.00e+00	8.98e+00	9.41e+00	8.87e+00	1.92e-01	2.59e-01	1.78e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	25218745	25222280	ENSMUSG00000026969	0.4938	+	Fam166a	protein_coding	6.69e-25	3.47e-22	-9.04e+00	8.95e+00	3.86e-01	0.00e+00	0.00e+00	9.57e+00	9.02e+00	8.25e+00	5.56e-01	3.79e-01	2.23e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	92859803	92902906	ENSMUSG00000034212	0.4993	-	Ankmy1	protein_coding	1.23e-24	6.21e-22	-9.14e+00	9.12e+00	1.39e-01	0.00e+00	0.00e+00	8.86e+00	9.38e+00	9.12e+00	1.15e-01	1.64e-01	1.38e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	12923833	12940402	ENSMUSG00000062480	0.4584	-	Acat3	protein_coding	2.67e-24	1.31e-21	-8.40e+00	9.98e+00	4.72e-01	1.19e+00	9.32e-04	1.00e+01	9.78e+00	1.01e+01	4.85e-01	4.10e-01	5.22e-01	2.58e+00	1.00e+00	0.00e+00	2.33e-03	4.66e-04	0.00e+00
chr18	36735068	36742391	ENSMUSG00000006850	0.4870	+	Tmco6	protein_coding	4.52e-24	2.16e-21	-8.18e+00	1.04e+01	9.14e-01	2.19e+00	2.47e-03	1.06e+01	1.02e+01	1.04e+01	1.02e+00	7.89e-01	9.37e-01	2.00e+00	2.58e+00	2.00e+00	2.02e-03	3.37e-03	2.02e-03
chr6	127122966	127126155	ENSMUSG00000107379	0.4564	+	Gm43126	antisense	5.47e-24	2.55e-21	-8.98e+00	8.89e+00	4.02e-01	0.00e+00	0.00e+00	8.32e+00	8.77e+00	9.57e+00	2.54e-01	3.48e-01	6.04e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	105518755	105523988	ENSMUSG00000031891	0.5481	+	Hsd11b2	protein_coding	7.89e-24	3.59e-21	-8.90e+00	8.89e+00	2.62e-01	0.00e+00	0.00e+00	8.68e+00	8.82e+00	9.16e+00	2.24e-01	2.48e-01	3.14e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	143150830	143151630	ENSMUSG00000083047	0.4906	-	Gm14082	processed_pseudogene	1.28e-23	5.67e-21	8.62e+00	3.33e-01	2.66e-04	7.89e+00	4.18e-01	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.97e-04	1.01e+01	4.81e+00	8.75e+00	8.91e-01	2.15e-02	3.42e-01
chr7	139579376	139582797	ENSMUSG00000041309	0.5786	-	Nkx6-2	protein_coding	1.31e-23	5.67e-21	-8.44e+00	9.43e+00	2.27e-01	6.67e-01	3.26e-04	9.61e+00	9.51e+00	9.17e+00	2.55e-01	2.38e-01	1.88e-01	0.00e+00	0.00e+00	2.00e+00	0.00e+00	0.00e+00	9.78e-04
chr1	169969409	169972396	ENSMUSG00000097503	0.4060	+	3110045C21Rik	antisense	1.79e-23	7.55e-21	-8.68e+00	9.08e+00	4.28e-01	3.33e-01	2.60e-04	8.85e+00	9.40e+00	8.99e+00	3.60e-01	5.27e-01	3.95e-01	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.81e-04
chr9	107558809	107568415	ENSMUSG00000097099	0.4994	-	Gm9917	antisense	1.88e-23	7.77e-21	-8.49e+00	9.21e+00	1.19e-01	5.28e-01	1.33e-04	9.53e+00	9.08e+00	9.02e+00	1.47e-01	1.08e-01	1.03e-01	0.00e+00	0.00e+00	1.58e+00	0.00e+00	0.00e+00	3.99e-04
chr2	38997476	39006168	ENSMUSG00000035295	0.5293	+	Wdr38	protein_coding	2.08e-23	8.38e-21	-8.74e+00	9.12e+00	1.08e-01	3.33e-01	6.30e-05	9.40e+00	8.68e+00	9.29e+00	1.28e-01	7.71e-02	1.18e-01	1.00e+00	0.00e+00	0.00e+00	1.89e-04	0.00e+00	0.00e+00
chr14	66135039	66152948	ENSMUSG00000022041	0.4905	+	Chrna2	protein_coding	2.41e-23	9.51e-21	-8.63e+00	9.03e+00	1.69e-01	3.33e-01	1.07e-04	8.76e+00	9.01e+00	9.32e+00	1.39e-01	1.65e-01	2.03e-01	0.00e+00	1.00e+00	0.00e+00	0.00e+00	3.20e-04	0.00e+00
chr1	172320501	172329318	ENSMUSG00000038026	0.5319	-	Kcnj9	protein_coding	3.97e-23	1.54e-20	-8.74e+00	8.73e+00	8.75e-02	0.00e+00	0.00e+00	8.63e+00	8.89e+00	8.68e+00	8.13e-02	9.71e-02	8.42e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	101279012	101296317	ENSMUSG00000078653	0.4580	+	Cntd1	protein_coding	5.11e-23	1.94e-20	-8.38e+00	9.11e+00	1.13e-01	5.28e-01	1.37e-04	9.27e+00	9.14e+00	8.91e+00	1.26e-01	1.16e-01	9.81e-02	1.58e+00	0.00e+00	0.00e+00	4.10e-04	0.00e+00	0.00e+00
chr8	84701457	84704715	ENSMUSG00000034041	0.5726	+	Lyl1	protein_coding	8.27e-23	3.07e-20	-8.73e+00	8.73e+00	2.55e-01	0.00e+00	0.00e+00	8.56e+00	8.78e+00	8.84e+00	2.26e-01	2.64e-01	2.76e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	27153714	27158668	ENSMUSG00000078787	0.5269	+	Cyp2t4	protein_coding	9.42e-23	3.42e-20	-8.72e+00	8.71e+00	3.10e-01	0.00e+00	0.00e+00	8.86e+00	8.75e+00	8.54e+00	3.41e-01	3.16e-01	2.72e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	95897768	95904691	ENSMUSG00000038526	0.5042	-	Car14	protein_coding	1.07e-22	3.83e-20	-8.33e+00	9.07e+00	9.93e-02	6.67e-01	1.24e-04	9.17e+00	9.06e+00	8.97e+00	1.07e-01	9.88e-02	9.25e-02	1.00e+00	0.00e+00	1.00e+00	1.85e-04	0.00e+00	1.85e-04
chr17	33630759	33645705	ENSMUSG00000092412	0.4843	+	Gm20507	processed_transcript	1.23e-22	4.30e-20	-8.59e+00	8.55e+00	3.06e-01	0.00e+00	0.00e+00	8.85e+00	8.73e+00	8.08e+00	3.66e-01	3.38e-01	2.15e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	76324891	76334153	ENSMUSG00000021057	0.4478	+	Akap5	protein_coding	1.26e-22	4.30e-20	-7.53e+00	1.16e+01	6.22e-01	4.16e+00	3.18e-03	1.11e+01	1.24e+01	1.11e+01	4.07e-01	1.04e+00	4.24e-01	4.32e+00	4.00e+00	4.17e+00	3.55e-03	2.80e-03	3.18e-03
chr6	125362660	125380793	ENSMUSG00000038167	0.5280	-	Plekhg6	protein_coding	1.78e-22	5.98e-20	-8.62e+00	8.60e+00	2.71e-01	0.00e+00	0.00e+00	8.48e+00	8.38e+00	8.94e+00	2.46e-01	2.28e-01	3.38e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	144264526	144358112	ENSMUSG00000038859	0.4482	-	Baiap2l1	protein_coding	2.48e-22	8.21e-20	-7.70e+00	1.05e+01	3.87e-01	2.68e+00	1.61e-03	1.11e+01	1.06e+01	9.82e+00	5.46e-01	3.84e-01	2.30e-01	3.00e+00	3.46e+00	1.58e+00	1.78e-03	2.54e-03	5.08e-04
chr11	96766802	96768269	ENSMUSG00000085242	0.5293	+	Gm11537	antisense	4.86e-22	1.58e-19	-8.49e+00	8.48e+00	2.85e-01	0.00e+00	0.00e+00	8.57e+00	8.37e+00	8.52e+00	3.01e-01	2.62e-01	2.92e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69851005	69858730	ENSMUSG00000001583	0.5286	-	Tnk1	protein_coding	5.42e-22	1.73e-19	-8.07e+00	9.05e+00	9.08e-02	6.67e-01	1.69e-04	8.70e+00	9.16e+00	9.29e+00	7.02e-02	9.67e-02	1.05e-01	0.00e+00	0.00e+00	2.00e+00	0.00e+00	0.00e+00	5.06e-04
chr9	45906497	45929726	ENSMUSG00000035382	0.4761	+	Pcsk7	protein_coding	8.81e-22	2.76e-19	-7.43e+00	1.33e+01	7.26e-01	5.81e+00	4.15e-03	1.34e+01	1.32e+01	1.33e+01	7.88e-01	6.66e-01	7.25e-01	6.41e+00	5.36e+00	5.67e+00	6.02e-03	2.86e-03	3.58e-03
chr9	44410159	44418569	ENSMUSG00000043923	0.4642	-	Ccdc84	protein_coding	1.05e-21	3.25e-19	-7.48e+00	1.06e+01	3.16e-01	3.05e+00	1.59e-03	1.10e+01	1.08e+01	1.01e+01	4.03e-01	3.36e-01	2.10e-01	3.70e+00	3.46e+00	2.00e+00	2.28e-03	1.90e-03	5.71e-04
chr8	92853653	92856334	ENSMUSG00000109669	0.5272	-	Gm45472	antisense	1.59e-21	4.80e-19	-8.35e+00	8.31e+00	2.60e-01	0.00e+00	0.00e+00	7.80e+00	8.55e+00	8.58e+00	1.77e-01	2.97e-01	3.05e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	43446462	43454628	ENSMUSG00000028459	0.5155	-	Cd72	protein_coding	2.83e-21	8.42e-19	-8.34e+00	8.27e+00	4.25e-02	0.00e+00	0.00e+00	8.76e+00	8.40e+00	7.65e+00	5.69e-02	4.42e-02	2.63e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	115774538	115805557	ENSMUSG00000030319	0.5026	+	Cand2	protein_coding	2.96e-21	8.68e-19	-7.15e+00	1.13e+01	8.98e-01	4.22e+00	5.99e-03	1.17e+01	1.15e+01	1.08e+01	1.09e+00	1.01e+00	5.97e-01	4.32e+00	4.17e+00	4.17e+00	6.45e-03	5.77e-03	5.77e-03
chr7	101818313	101822726	ENSMUSG00000007946	0.5659	+	Phox2a	protein_coding	3.01e-21	8.68e-19	-8.39e+00	8.39e+00	1.09e-01	0.00e+00	0.00e+00	8.35e+00	8.39e+00	8.44e+00	1.05e-01	1.08e-01	1.12e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	155611212	155634307	ENSMUSG00000074652	0.5475	+	Myh7b	protein_coding	3.18e-21	9.03e-19	-8.41e+00	8.36e+00	1.24e-01	0.00e+00	0.00e+00	8.02e+00	8.23e+00	8.84e+00	9.47e-02	1.10e-01	1.68e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	97160990	97161675	ENSMUSG00000084936	0.3907	+	Gm11583	antisense	3.61e-21	1.01e-18	-8.39e+00	8.30e+00	2.66e-01	0.00e+00	0.00e+00	8.95e+00	8.20e+00	7.73e+00	3.95e-01	2.34e-01	1.68e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	115097689	115098295	ENSMUSG00000072693	0.4168	-	Gm10401	protein_coding	5.20e-21	1.43e-18	-8.39e+00	8.39e+00	2.63e-01	0.00e+00	0.00e+00	8.39e+00	8.54e+00	8.24e+00	2.63e-01	2.90e-01	2.36e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	88171556	88177785	ENSMUSG00000096935	0.4767	-	1700113A16Rik	antisense	7.10e-21	1.93e-18	-8.13e+00	8.54e+00	1.48e-01	3.33e-01	1.33e-04	8.50e+00	8.46e+00	8.65e+00	1.44e-01	1.40e-01	1.60e-01	1.00e+00	0.00e+00	0.00e+00	3.99e-04	0.00e+00	0.00e+00
chr17	33638056	33645706	ENSMUSG00000032739	0.4912	+	Pram1	protein_coding	1.00e-20	2.68e-18	-7.86e+00	8.56e+00	3.41e-02	5.28e-01	5.90e-05	8.86e+00	8.73e+00	8.08e+00	4.11e-02	3.75e-02	2.38e-02	0.00e+00	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.77e-04
chr2	32308471	32353338	ENSMUSG00000026825	0.5353	-	Dnm1	protein_coding	1.04e-20	2.74e-18	-7.26e+00	9.36e+00	7.69e-02	1.80e+00	3.96e-04	1.00e+01	9.49e+00	8.58e+00	1.12e-01	7.76e-02	4.13e-02	0.00e+00	2.81e+00	2.58e+00	0.00e+00	6.48e-04	5.40e-04
chr11	100228845	100232078	ENSMUSG00000084257	0.4858	-	Gm11597	unprocessed_pseudogene	1.09e-20	2.83e-18	8.25e+00	0.00e+00	0.00e+00	6.97e+00	2.42e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	9.40e+00	3.70e+00	7.81e+00	5.39e-01	9.57e-03	1.79e-01
chr5	24502757	24527202	ENSMUSG00000067724	0.4991	-	Gbx1	protein_coding	1.19e-20	3.06e-18	-8.26e+00	8.23e+00	9.90e-02	0.00e+00	0.00e+00	8.63e+00	7.99e+00	8.07e+00	1.28e-01	8.23e-02	8.68e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	101339660	101347939	ENSMUSG00000101925	0.4345	-	Gm28156	antisense	1.38e-20	3.49e-18	-8.45e+00	8.44e+00	2.78e-01	0.00e+00	0.00e+00	8.29e+00	8.48e+00	8.55e+00	2.50e-01	2.85e-01	2.98e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	42358487	42373268	ENSMUSG00000029859	0.4893	-	Epha1	protein_coding	1.68e-20	4.18e-18	-7.20e+00	1.02e+01	4.21e-01	2.98e+00	2.51e-03	9.96e+00	1.03e+01	1.03e+01	3.57e-01	4.56e-01	4.51e-01	3.32e+00	2.81e+00	2.81e+00	3.23e-03	2.15e-03	2.15e-03
chr8	106870242	106884566	ENSMUSG00000031910	0.5057	+	Has3	protein_coding	2.20e-20	5.40e-18	-8.19e+00	8.19e+00	4.23e-02	0.00e+00	0.00e+00	8.35e+00	8.16e+00	8.05e+00	4.73e-02	4.13e-02	3.83e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	32777381	32784428	ENSMUSG00000038987	0.5155	-	Cfap157	protein_coding	2.28e-20	5.52e-18	-8.26e+00	8.21e+00	1.16e-01	0.00e+00	0.00e+00	8.20e+00	7.79e+00	8.65e+00	1.12e-01	8.38e-02	1.52e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	78176711	78181909	ENSMUSG00000019437	0.5266	+	Tlcd1	protein_coding	4.17e-20	9.96e-18	-6.93e+00	1.09e+01	5.24e-01	3.93e+00	4.03e-03	1.07e+01	1.08e+01	1.11e+01	4.74e-01	4.99e-01	6.00e-01	3.91e+00	3.70e+00	4.17e+00	3.94e-03	3.37e-03	4.78e-03
chr8	109614517	109674386	ENSMUSG00000048827	0.4630	+	Pkd1l3	protein_coding	4.64e-20	1.10e-17	-7.89e+00	8.54e+00	6.31e-02	5.28e-01	1.06e-04	7.95e+00	8.50e+00	9.18e+00	3.92e-02	5.76e-02	9.23e-02	0.00e+00	1.58e+00	0.00e+00	0.00e+00	3.19e-04	0.00e+00
chr16	32475522	32487879	ENSMUSG00000035699	0.4808	-	Slc51a	protein_coding	5.59e-20	1.30e-17	-8.25e+00	8.25e+00	2.06e-01	0.00e+00	0.00e+00	8.16e+00	8.23e+00	8.37e+00	1.93e-01	2.03e-01	2.23e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr16	11178176	11192292	ENSMUSG00000096959	0.4570	+	4930509G22Rik	lincRNA	6.66e-20	1.53e-17	-7.62e+00	8.62e+00	3.13e-01	8.62e-01	7.97e-04	8.72e+00	8.62e+00	8.50e+00	3.37e-01	3.13e-01	2.88e-01	1.00e+00	0.00e+00	1.58e+00	7.97e-04	0.00e+00	1.59e-03
chr6	119236526	119352407	ENSMUSG00000041460	0.4873	+	Cacna2d4	protein_coding	8.21e-20	1.87e-17	-8.06e+00	8.00e+00	2.15e-02	0.00e+00	0.00e+00	8.34e+00	8.29e+00	7.37e+00	2.61e-02	2.53e-02	1.33e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr13	55325168	55329758	ENSMUSG00000021485	0.5450	-	Mxd3	protein_coding	1.51e-19	3.38e-17	-6.94e+00	9.74e+00	4.59e-01	2.78e+00	3.21e-03	9.63e+00	9.64e+00	9.95e+00	4.24e-01	4.28e-01	5.27e-01	3.17e+00	2.58e+00	2.58e+00	4.28e-03	2.68e-03	2.68e-03
chr12	72101292	72185029	ENSMUSG00000021086	0.4139	-	Ccdc175	protein_coding	1.94e-19	4.26e-17	-8.10e+00	8.10e+00	2.00e-01	0.00e+00	0.00e+00	8.25e+00	8.05e+00	8.00e+00	2.21e-01	1.93e-01	1.86e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	28807205	28813985	ENSMUSG00000104444	0.4150	-	Gm33051	antisense	1.94e-19	4.26e-17	-8.19e+00	8.18e+00	2.32e-01	0.00e+00	0.00e+00	7.97e+00	8.23e+00	8.34e+00	1.99e-01	2.38e-01	2.58e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	78439668	78468634	ENSMUSG00000016942	0.5308	-	Tmprss6	protein_coding	2.71e-19	5.86e-17	-7.69e+00	8.42e+00	1.90e-01	5.28e-01	3.70e-04	8.61e+00	8.21e+00	8.43e+00	2.17e-01	1.64e-01	1.91e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.11e-03	0.00e+00
chr17	33810520	33822918	ENSMUSG00000042099	0.4973	+	Kank3	protein_coding	2.86e-19	6.11e-17	-6.90e+00	1.01e+01	5.32e-01	2.66e+00	3.97e-03	9.89e+00	1.02e+01	1.01e+01	4.71e-01	5.86e-01	5.40e-01	2.81e+00	4.17e+00	1.00e+00	2.98e-03	8.44e-03	4.97e-04
chr1	39371492	39478755	ENSMUSG00000003134	0.4730	-	Tbc1d8	protein_coding	3.10e-19	6.54e-17	-7.04e+00	9.50e+00	3.44e-02	2.39e+00	2.15e-04	9.29e+00	9.26e+00	9.97e+00	2.87e-02	2.82e-02	4.62e-02	3.00e+00	2.58e+00	1.58e+00	3.23e-04	2.30e-04	9.22e-05
chr7	120658731	120670343	ENSMUSG00000030887	0.4401	-	Pdzd9	protein_coding	4.11e-19	8.59e-17	-8.10e+00	8.07e+00	6.98e-02	0.00e+00	0.00e+00	7.98e+00	7.80e+00	8.44e+00	6.41e-02	5.67e-02	8.86e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	102393403	102402555	ENSMUSG00000006575	0.5573	+	Rundc3a	protein_coding	4.30e-19	8.88e-17	-6.90e+00	9.40e+00	1.16e-01	1.97e+00	8.05e-04	9.29e+00	9.35e+00	9.55e+00	1.08e-01	1.13e-01	1.29e-01	0.00e+00	3.32e+00	2.58e+00	0.00e+00	1.55e-03	8.63e-04
chr13	8940336	8940977	ENSMUSG00000061988	0.5171	-	Rpl10a-ps2	processed_pseudogene	5.55e-19	1.13e-16	7.12e+00	1.88e+00	2.39e-03	8.32e+00	4.42e-01	1.00e+00	2.32e+00	2.32e+00	7.97e-04	3.19e-03	3.19e-03	1.02e+01	6.00e+00	8.76e+00	9.30e-01	5.02e-02	3.46e-01
chr14	46379414	46383608	ENSMUSG00000079261	0.4923	+	Gm15217	protein_coding	6.55e-19	1.32e-16	-7.80e+00	7.99e+00	1.94e-01	3.33e-01	2.19e-04	8.78e+00	8.41e+00	6.77e+00	2.88e-01	2.24e-01	7.11e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	6.58e-04
chr3	104794836	104818563	ENSMUSG00000002227	0.4862	-	Mov10	protein_coding	7.75e-19	1.55e-16	-6.48e+00	1.16e+01	1.26e-01	5.10e+00	1.38e-03	1.20e+01	1.16e+01	1.12e+01	1.62e-01	1.22e-01	9.54e-02	5.46e+00	4.52e+00	5.32e+00	1.71e-03	8.76e-04	1.55e-03
chr8	105932003	105933862	ENSMUSG00000031896	0.5430	-	Ctrl	protein_coding	8.02e-19	1.58e-16	-7.95e+00	7.95e+00	9.65e-02	0.00e+00	0.00e+00	7.98e+00	7.97e+00	7.91e+00	9.80e-02	9.77e-02	9.38e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	95410346	95411207	ENSMUSG00000096177	0.5580	-	Gm5070	processed_pseudogene	8.24e-19	1.61e-16	6.73e+00	2.99e+00	5.58e-03	8.28e+00	6.77e-01	2.81e+00	3.00e+00	3.17e+00	4.78e-03	5.58e-03	6.38e-03	1.11e+01	5.36e+00	8.41e+00	1.73e+00	3.19e-02	2.70e-01
chr4	41769467	41774247	ENSMUSG00000073888	0.5227	-	Ccl27a	protein_coding	8.78e-19	1.70e-16	-6.48e+00	1.10e+01	4.79e-01	4.51e+00	5.14e-03	1.16e+01	1.08e+01	1.05e+01	7.04e-01	3.94e-01	3.39e-01	4.58e+00	4.00e+00	4.95e+00	5.22e-03	3.40e-03	6.80e-03
chr17	25786580	25790513	ENSMUSG00000071202	0.5399	+	Ccdc78	protein_coding	1.10e-18	2.10e-16	-7.96e+00	7.95e+00	1.59e-01	0.00e+00	0.00e+00	7.70e+00	8.02e+00	8.12e+00	1.33e-01	1.66e-01	1.79e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	137518548	137527935	ENSMUSG00000029714	0.5839	+	Gigyf1	protein_coding	1.13e-18	2.14e-16	-6.75e+00	9.51e+00	1.59e-01	2.71e+00	1.27e-03	9.05e+00	1.00e+01	9.46e+00	1.12e-01	2.17e-01	1.48e-01	3.32e+00	2.81e+00	2.00e+00	1.90e-03	1.27e-03	6.33e-04
chr11	29526408	29545279	ENSMUSG00000020459	0.3929	+	Mtif2	protein_coding	1.16e-18	2.17e-16	-6.46e+00	1.26e+01	7.97e-01	6.11e+00	8.90e-03	1.31e+01	1.25e+01	1.21e+01	1.10e+00	7.22e-01	5.74e-01	6.29e+00	6.36e+00	5.70e+00	9.84e-03	1.04e-02	6.52e-03
chr10	79970715	79977190	ENSMUSG00000035745	0.5865	+	Grin3b	protein_coding	1.27e-18	2.35e-16	-7.36e+00	8.04e+00	1.05e-01	5.28e-01	2.56e-04	7.45e+00	8.42e+00	8.24e+00	6.68e-02	1.31e-01	1.16e-01	1.58e+00	0.00e+00	0.00e+00	7.68e-04	0.00e+00	0.00e+00
chr7	119742856	119744110	ENSMUSG00000109404	0.4382	-	Gm19963	processed_pseudogene	1.28e-18	2.35e-16	-7.89e+00	7.88e+00	1.88e-01	0.00e+00	0.00e+00	7.71e+00	7.91e+00	8.02e+00	1.66e-01	1.91e-01	2.07e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	35371546	35931228	ENSMUSG00000037646	0.3916	+	Vps13b	protein_coding	1.35e-18	2.46e-16	-6.59e+00	1.01e+01	4.84e-01	3.46e+00	4.62e-03	1.05e+01	9.87e+00	1.00e+01	6.17e-01	3.92e-01	4.43e-01	4.09e+00	3.70e+00	2.58e+00	6.72e-03	5.04e-03	2.10e-03
chr8	94674894	94696278	ENSMUSG00000031775	0.5041	-	Pllp	protein_coding	1.53e-18	2.75e-16	-7.52e+00	8.26e+00	1.21e-01	5.28e-01	2.64e-04	8.29e+00	8.21e+00	8.28e+00	1.23e-01	1.17e-01	1.23e-01	0.00e+00	0.00e+00	1.58e+00	0.00e+00	0.00e+00	7.93e-04
chr17	34613349	34615971	ENSMUSG00000015467	0.5791	-	Egfl8	protein_coding	1.57e-18	2.80e-16	-6.93e+00	8.98e+00	1.26e-01	1.15e+00	7.96e-04	9.12e+00	9.43e+00	8.40e+00	1.33e-01	1.64e-01	8.02e-02	3.46e+00	0.00e+00	0.00e+00	2.39e-03	0.00e+00	0.00e+00
chr11	101260567	101277409	ENSMUSG00000035112	0.5101	+	Wnk4	protein_coding	1.68e-18	2.96e-16	-7.27e+00	8.47e+00	1.74e-02	1.06e+00	6.46e-05	8.66e+00	8.69e+00	8.05e+00	1.95e-02	2.00e-02	1.28e-02	1.58e+00	0.00e+00	1.58e+00	9.70e-05	0.00e+00	9.70e-05
chr4	43566928	43578873	ENSMUSG00000028467	0.5073	-	Gba2	protein_coding	2.16e-18	3.78e-16	-6.96e+00	8.96e+00	9.43e-02	1.80e+00	5.69e-04	8.96e+00	8.94e+00	8.99e+00	9.42e-02	9.29e-02	9.59e-02	1.00e+00	2.81e+00	1.58e+00	1.90e-04	1.14e-03	3.79e-04
chr4	43427019	43429134	ENSMUSG00000042788	0.5425	-	Fam166b	protein_coding	2.30e-18	3.99e-16	-7.96e+00	7.94e+00	6.08e-02	0.00e+00	0.00e+00	7.85e+00	7.73e+00	8.24e+00	5.64e-02	5.20e-02	7.39e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr13	3566036	3611108	ENSMUSG00000033799	0.3807	-	Fam208b	protein_coding	2.45e-18	4.20e-16	-6.61e+00	9.32e+00	3.45e-01	2.73e+00	3.01e-03	9.53e+00	9.48e+00	8.96e+00	3.92e-01	3.80e-01	2.64e-01	2.58e+00	2.81e+00	2.81e+00	2.66e-03	3.19e-03	3.19e-03
chr2	155278243	155357430	ENSMUSG00000038383	0.4369	-	Pigu	protein_coding	2.66e-18	4.52e-16	-6.44e+00	1.07e+01	4.21e-01	4.25e+00	4.60e-03	1.03e+01	1.11e+01	1.07e+01	3.11e-01	5.51e-01	4.01e-01	4.70e+00	3.81e+00	4.25e+00	6.17e-03	3.21e-03	4.44e-03
chr3	97673031	97674694	ENSMUSG00000090441	0.4189	-	Gm17651	protein_coding	2.80e-18	4.71e-16	-8.08e+00	8.07e+00	2.15e-01	0.00e+00	0.00e+00	7.89e+00	8.12e+00	8.19e+00	1.89e-01	2.22e-01	2.33e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	122169893	122186207	ENSMUSG00000030866	0.4982	-	Ern2	protein_coding	3.97e-18	6.61e-16	-7.71e+00	7.70e+00	7.72e-02	0.00e+00	0.00e+00	7.91e+00	7.57e+00	7.62e+00	8.87e-02	7.01e-02	7.27e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	97048691	97051432	ENSMUSG00000085262	0.5255	-	Gm11574	processed_transcript	4.63e-18	7.64e-16	-7.85e+00	7.83e+00	1.83e-01	0.00e+00	0.00e+00	8.09e+00	7.81e+00	7.60e+00	2.16e-01	1.78e-01	1.54e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	79130777	79156301	ENSMUSG00000021125	0.4294	+	Arg2	protein_coding	4.88e-18	7.98e-16	-7.85e+00	7.83e+00	1.51e-01	0.00e+00	0.00e+00	8.11e+00	7.88e+00	7.49e+00	1.81e-01	1.54e-01	1.17e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	83762644	83768326	ENSMUSG00000014747	0.5233	+	Ankrd53	protein_coding	4.95e-18	8.03e-16	-7.71e+00	7.71e+00	8.26e-02	0.00e+00	0.00e+00	7.63e+00	7.83e+00	7.67e+00	7.78e-02	8.97e-02	8.02e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	46711998	46715700	ENSMUSG00000040026	0.4807	-	Saa3	protein_coding	8.43e-18	1.36e-15	6.39e+00	5.32e+00	9.58e-03	1.17e+01	8.23e-01	4.39e+00	5.43e+00	6.15e+00	4.36e-03	9.15e-03	1.52e-02	1.23e+01	1.04e+01	1.23e+01	1.09e+00	3.03e-01	1.08e+00
chr10	93540632	93584327	ENSMUSG00000036168	0.4470	+	Ccdc38	protein_coding	1.28e-17	2.04e-15	-7.29e+00	8.29e+00	5.60e-02	8.62e-01	1.79e-04	8.46e+00	8.17e+00	8.23e+00	6.29e-02	5.14e-02	5.36e-02	0.00e+00	1.00e+00	1.58e+00	0.00e+00	1.79e-04	3.58e-04
chr9	108950003	108950541	ENSMUSG00000103754	0.5566	-	Gm37284	TEC	2.01e-17	3.18e-15	-7.63e+00	7.63e+00	1.58e-01	0.00e+00	0.00e+00	7.54e+00	7.65e+00	7.71e+00	1.48e-01	1.59e-01	1.66e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	30888694	30906965	ENSMUSG00000029165	0.4870	+	Agbl5	protein_coding	2.40e-17	3.76e-15	-6.25e+00	9.87e+00	8.01e-02	3.66e+00	9.70e-04	1.02e+01	1.01e+01	9.37e+00	9.65e-02	8.86e-02	5.50e-02	3.46e+00	3.81e+00	3.70e+00	8.31e-04	1.08e-03	9.98e-04
chr7	83642825	83745726	ENSMUSG00000001741	0.4512	-	Il16	protein_coding	2.49e-17	3.86e-15	-7.42e+00	7.81e+00	1.43e-02	3.33e-01	2.11e-05	8.08e+00	7.91e+00	7.43e+00	1.71e-02	1.52e-02	1.08e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	6.32e-05
chr15	3280627	3303526	ENSMUSG00000091119	0.3855	-	Ccdc152	protein_coding	3.33e-17	5.12e-15	-7.58e+00	7.53e+00	1.52e-01	0.00e+00	0.00e+00	7.61e+00	7.94e+00	7.03e+00	1.56e-01	1.95e-01	1.04e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69964779	69967885	ENSMUSG00000018569	0.5848	+	Cldn7	protein_coding	3.53e-17	5.39e-15	-7.71e+00	7.70e+00	7.59e-02	0.00e+00	0.00e+00	7.91e+00	7.67e+00	7.51e+00	8.76e-02	7.41e-02	6.60e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	46038935	46116032	ENSMUSG00000028328	0.4920	+	Tmod1	protein_coding	4.59e-17	6.95e-15	-6.40e+00	9.06e+00	9.83e-02	2.60e+00	9.82e-04	9.14e+00	8.98e+00	9.06e+00	1.04e-01	9.26e-02	9.83e-02	3.00e+00	2.00e+00	2.81e+00	1.29e-03	5.52e-04	1.10e-03
chr11	51584757	51604489	ENSMUSG00000020359	0.4734	+	Phykpl	protein_coding	4.82e-17	7.24e-15	-6.13e+00	1.09e+01	1.31e-01	4.70e+00	1.80e-03	1.06e+01	1.07e+01	1.14e+01	9.87e-02	1.10e-01	1.83e-01	5.52e+00	4.32e+00	4.25e+00	2.96e-03	1.25e-03	1.18e-03
chr7	45233632	45239115	ENSMUSG00000030798	0.5450	-	Cd37	protein_coding	6.00e-17	8.93e-15	-7.62e+00	7.62e+00	3.99e-02	0.00e+00	0.00e+00	7.71e+00	7.65e+00	7.51e+00	4.23e-02	4.07e-02	3.68e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	36090379	36091829	ENSMUSG00000059301	0.4673	+	Gm5434	protein_coding	8.12e-17	1.20e-14	-7.18e+00	7.92e+00	1.35e-01	5.28e-01	3.73e-04	8.01e+00	7.88e+00	7.86e+00	1.44e-01	1.31e-01	1.30e-01	0.00e+00	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.12e-03
chrX	134588149	134601125	ENSMUSG00000031266	0.4258	-	Gla	protein_coding	8.16e-17	1.20e-14	-6.00e+00	1.06e+01	3.88e-01	4.60e+00	5.84e-03	1.11e+01	1.06e+01	1.02e+01	5.11e-01	3.73e-01	2.81e-01	5.21e+00	4.00e+00	4.58e+00	8.52e-03	3.55e-03	5.44e-03
chr2	152962485	153008482	ENSMUSG00000074673	0.4816	+	Ttll9	protein_coding	1.02e-16	1.48e-14	-6.77e+00	8.27e+00	2.04e-02	9.36e-01	1.25e-04	7.86e+00	8.03e+00	8.92e+00	1.45e-02	1.63e-02	3.04e-02	2.81e+00	0.00e+00	0.00e+00	3.76e-04	0.00e+00	0.00e+00
chr10	86055125	86498896	ENSMUSG00000059602	0.4537	-	Syn3	protein_coding	1.11e-16	1.60e-14	-7.40e+00	7.81e+00	2.04e-02	3.33e-01	3.04e-05	7.73e+00	7.69e+00	8.00e+00	1.92e-02	1.88e-02	2.33e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	9.12e-05
chr7	29953621	29965711	ENSMUSG00000063623	0.4614	+	C230062I16Rik	processed_transcript	1.42e-16	2.03e-14	-5.93e+00	1.08e+01	4.57e-01	4.84e+00	7.24e-03	1.07e+01	1.07e+01	1.10e+01	4.27e-01	4.28e-01	5.18e-01	4.75e+00	4.86e+00	4.91e+00	6.80e-03	7.33e-03	7.59e-03
chr15	71795795	72034227	ENSMUSG00000079022	0.4426	-	Col22a1	protein_coding	1.68e-16	2.39e-14	-6.77e+00	8.35e+00	3.79e-02	1.53e+00	2.33e-04	8.19e+00	8.36e+00	8.49e+00	3.38e-02	3.80e-02	4.17e-02	1.58e+00	2.00e+00	1.00e+00	2.33e-04	3.49e-04	1.16e-04
chr11	5058128	5060385	ENSMUSG00000034209	0.5735	+	Rasl10a	protein_coding	2.25e-16	3.17e-14	-7.55e+00	7.55e+00	1.18e-01	0.00e+00	0.00e+00	7.56e+00	7.58e+00	7.50e+00	1.19e-01	1.20e-01	1.14e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	85575676	85577295	ENSMUSG00000094127	0.4617	+	G530012D18Rik	protein_coding	2.42e-16	3.36e-14	-7.59e+00	7.53e+00	1.53e-01	0.00e+00	0.00e+00	7.99e+00	7.62e+00	6.98e+00	2.02e-01	1.56e-01	9.97e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	78850862	78855529	ENSMUSG00000043501	0.5120	-	Lgals2	protein_coding	2.42e-16	3.36e-14	-7.45e+00	7.44e+00	1.24e-01	0.00e+00	0.00e+00	7.29e+00	7.45e+00	7.58e+00	1.11e-01	1.24e-01	1.37e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	5406740	5422847	ENSMUSG00000086938	0.4815	+	4930481A15Rik	antisense	2.69e-16	3.70e-14	-6.08e+00	9.07e+00	1.40e-01	2.94e+00	1.81e-03	9.34e+00	9.00e+00	8.86e+00	1.67e-01	1.32e-01	1.20e-01	2.32e+00	3.17e+00	3.32e+00	1.03e-03	2.07e-03	2.33e-03
chr7	45481877	45523632	ENSMUSG00000023467	0.4946	+	Tulp2	protein_coding	2.76e-16	3.77e-14	-7.45e+00	7.44e+00	2.46e-02	0.00e+00	0.00e+00	7.57e+00	7.52e+00	7.25e+00	2.67e-02	2.57e-02	2.13e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	152153447	152154116	ENSMUSG00000084343	0.5194	+	Gm16198	processed_pseudogene	3.19e-16	4.33e-14	7.76e+00	0.00e+00	0.00e+00	6.79e+00	1.72e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	8.80e+00	4.00e+00	7.56e+00	3.55e-01	1.20e-02	1.50e-01
chr11	120489406	120492394	ENSMUSG00000086929	0.5490	-	Gm11788	antisense	3.58e-16	4.81e-14	-7.48e+00	7.45e+00	1.41e-01	0.00e+00	0.00e+00	7.81e+00	7.42e+00	7.13e+00	1.78e-01	1.36e-01	1.11e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	141633456	141655319	ENSMUSG00000048191	0.5300	-	Muc6	protein_coding	3.61e-16	4.82e-14	-7.55e+00	7.55e+00	9.24e-02	0.00e+00	0.00e+00	7.55e+00	7.52e+00	7.58e+00	9.23e-02	9.08e-02	9.42e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	10993465	11303681	ENSMUSG00000048960	0.3910	+	Prex2	protein_coding	4.51e-16	5.99e-14	-6.12e+00	8.68e+00	2.25e-02	2.01e+00	2.69e-04	8.37e+00	9.02e+00	8.67e+00	1.78e-02	2.78e-02	2.18e-02	2.58e+00	0.00e+00	3.46e+00	2.69e-04	0.00e+00	5.38e-04
chr4	101068983	101152370	ENSMUSG00000035275	0.4489	+	Raver2	protein_coding	5.14e-16	6.76e-14	-6.27e+00	8.49e+00	5.12e-02	2.06e+00	5.21e-04	8.39e+00	8.49e+00	8.60e+00	4.75e-02	5.10e-02	5.51e-02	1.58e+00	3.00e+00	1.58e+00	2.84e-04	9.95e-04	2.84e-04
chr9	108358202	108359069	ENSMUSG00000104280	0.5703	-	Rps2-ps11	processed_pseudogene	6.33e-16	8.28e-14	6.77e+00	1.72e+00	1.86e-03	7.19e+00	2.88e-01	1.58e+00	2.00e+00	1.58e+00	1.59e-03	2.39e-03	1.59e-03	9.81e+00	4.32e+00	7.43e+00	7.14e-01	1.52e-02	1.36e-01
chr2	32925216	32961614	ENSMUSG00000026792	0.5183	-	Lrsam1	protein_coding	7.60e-16	9.86e-14	-5.93e+00	9.56e+00	4.61e-02	3.72e+00	7.03e-04	9.31e+00	8.96e+00	1.04e+01	3.52e-02	2.76e-02	7.55e-02	3.58e+00	4.25e+00	3.32e+00	6.11e-04	9.99e-04	5.00e-04
chr19	45026906	45046614	ENSMUSG00000074818	0.5288	-	Pdzd7	protein_coding	7.67e-16	9.88e-14	-7.55e+00	7.53e+00	9.48e-02	0.00e+00	0.00e+00	7.26e+00	7.65e+00	7.69e+00	7.74e-02	1.02e-01	1.05e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr16	58468125	58524243	ENSMUSG00000022747	0.4252	-	St3gal6	protein_coding	9.19e-16	1.18e-13	-6.59e+00	8.17e+00	2.85e-02	1.44e+00	1.98e-04	8.21e+00	8.14e+00	8.17e+00	2.92e-02	2.78e-02	2.84e-02	2.32e+00	1.00e+00	1.00e+00	3.95e-04	9.88e-05	9.88e-05
chr17	25242659	25256364	ENSMUSG00000047507	0.5719	-	Baiap3	protein_coding	9.51e-16	1.21e-13	-7.45e+00	7.29e+00	2.90e-02	0.00e+00	0.00e+00	8.12e+00	7.32e+00	6.43e+00	4.62e-02	2.65e-02	1.42e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	134102570	134127593	ENSMUSG00000012126	0.5335	+	Ubxn11	protein_coding	1.15e-15	1.44e-13	-6.01e+00	8.67e+00	3.76e-02	2.06e+00	4.91e-04	8.42e+00	8.84e+00	8.74e+00	3.14e-02	4.21e-02	3.93e-02	2.58e+00	0.00e+00	3.58e+00	4.60e-04	0.00e+00	1.01e-03
chr9	106463962	106465938	ENSMUSG00000091735	0.6297	-	Gpr62	protein_coding	1.15e-15	1.44e-13	-6.94e+00	7.66e+00	1.21e-01	5.28e-01	3.95e-04	7.35e+00	7.97e+00	7.66e+00	9.60e-02	1.48e-01	1.19e-01	1.58e+00	0.00e+00	0.00e+00	1.18e-03	0.00e+00	0.00e+00
chr1	181576559	181815774	ENSMUSG00000047369	0.4257	+	Dnah14	protein_coding	1.16e-15	1.44e-13	-7.13e+00	7.54e+00	2.07e-02	3.33e-01	3.70e-05	7.71e+00	7.32e+00	7.59e+00	2.31e-02	1.77e-02	2.13e-02	0.00e+00	1.00e+00	0.00e+00	0.00e+00	1.11e-04	0.00e+00
chr5	48389502	49524907	ENSMUSG00000029088	0.3778	-	Kcnip4	protein_coding	1.20e-15	1.49e-13	-7.38e+00	7.22e+00	4.23e-02	0.00e+00	0.00e+00	8.02e+00	7.32e+00	6.32e+00	6.62e-02	4.06e-02	2.02e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	24488783	24508905	ENSMUSG00000033597	0.5544	+	Caskin1	protein_coding	1.24e-15	1.53e-13	-7.04e+00	7.45e+00	5.92e-02	3.33e-01	1.13e-04	7.49e+00	7.51e+00	7.36e+00	6.08e-02	6.15e-02	5.54e-02	1.00e+00	0.00e+00	0.00e+00	3.40e-04	0.00e+00	0.00e+00
chr2	181147653	181157014	ENSMUSG00000016349	0.5490	-	Eef1a2	protein_coding	1.80e-15	2.20e-13	7.67e+00	0.00e+00	0.00e+00	6.54e+00	1.28e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	8.92e+00	3.91e+00	6.78e+00	3.06e-01	8.86e-03	6.90e-02
chr14	55618037	55625395	ENSMUSG00000002324	0.5205	+	Rec8	protein_coding	2.26e-15	2.74e-13	-7.31e+00	7.31e+00	4.16e-02	0.00e+00	0.00e+00	7.48e+00	7.17e+00	7.28e+00	4.66e-02	3.77e-02	4.06e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	95236920	95241598	ENSMUSG00000068860	0.5012	-	Gm128	protein_coding	2.46e-15	2.97e-13	-7.39e+00	7.36e+00	1.08e-01	0.00e+00	0.00e+00	7.08e+00	7.23e+00	7.76e+00	8.68e-02	9.66e-02	1.40e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	26195999	26199087	ENSMUSG00000024184	0.5458	-	Pdia2	protein_coding	2.58e-15	3.09e-13	-7.38e+00	7.37e+00	6.38e-02	0.00e+00	0.00e+00	7.11e+00	7.44e+00	7.55e+00	5.29e-02	6.68e-02	7.18e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	149144263	149153540	ENSMUSG00000107388	0.4528	+	Gm42788	lincRNA	3.82e-15	4.52e-13	-7.19e+00	7.18e+00	1.16e-01	0.00e+00	0.00e+00	7.06e+00	7.09e+00	7.40e+00	1.05e-01	1.08e-01	1.34e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	155775342	155818366	ENSMUSG00000027612	0.4902	+	Mmp24	protein_coding	3.83e-15	4.52e-13	-7.27e+00	7.25e+00	3.17e-02	0.00e+00	0.00e+00	7.31e+00	7.48e+00	6.95e+00	3.27e-02	3.69e-02	2.55e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chrX	90744546	90745062	ENSMUSG00000084289	0.4565	-	Gm6977	processed_pseudogene	3.89e-15	4.56e-13	5.55e+00	4.48e+00	1.70e-02	9.28e+00	8.35e-01	4.32e+00	4.46e+00	4.64e+00	1.52e-02	1.67e-02	1.91e-02	1.11e+01	7.06e+00	9.70e+00	1.74e+00	1.05e-01	6.60e-01
chr5	30950066	30955091	ENSMUSG00000006638	0.4956	+	Abhd1	processed_transcript	4.15e-15	4.81e-13	-7.35e+00	7.33e+00	2.59e-02	0.00e+00	0.00e+00	7.62e+00	7.39e+00	6.97e+00	3.12e-02	2.66e-02	1.98e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	5092871	5098418	ENSMUSG00000024873	0.5624	-	Cnih2	protein_coding	4.16e-15	4.81e-13	-6.62e+00	7.83e+00	1.23e-01	7.74e-01	7.20e-04	7.56e+00	7.99e+00	7.94e+00	1.01e-01	1.37e-01	1.32e-01	2.32e+00	0.00e+00	0.00e+00	2.16e-03	0.00e+00	0.00e+00
chr4	129608331	129614257	ENSMUSG00000078552	0.5205	-	Dcdc2b	protein_coding	4.25e-15	4.89e-13	-7.11e+00	7.52e+00	1.10e-01	3.33e-01	1.99e-04	7.52e+00	7.61e+00	7.43e+00	1.10e-01	1.17e-01	1.02e-01	0.00e+00	1.00e+00	0.00e+00	0.00e+00	5.98e-04	0.00e+00
chr2	69871412	69872202	ENSMUSG00000089902	0.3312	-	Gm13625	processed_transcript	4.58e-15	5.24e-13	-5.78e+00	9.23e+00	4.80e-01	3.21e+00	7.97e-03	9.41e+00	9.05e+00	9.22e+00	5.43e-01	4.21e-01	4.75e-01	3.46e+00	4.17e+00	2.00e+00	7.97e-03	1.36e-02	2.39e-03
chr6	113631649	113633144	ENSMUSG00000097671	0.5107	-	1700015O11Rik	lincRNA	5.19e-15	5.90e-13	-7.49e+00	7.21e+00	1.43e-01	0.00e+00	0.00e+00	6.32e+00	6.89e+00	8.41e+00	6.30e-02	9.41e-02	2.71e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69655314	69656727	ENSMUSG00000041287	0.5750	+	Sox15	protein_coding	5.55e-15	6.27e-13	-6.96e+00	7.32e+00	1.21e-01	3.33e-01	2.45e-04	7.75e+00	7.46e+00	6.74e+00	1.57e-01	1.29e-01	7.79e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.35e-04
chr9	21405242	21411720	ENSMUSG00000097665	0.4893	-	Gm16853	antisense	5.83e-15	6.54e-13	-7.19e+00	7.56e+00	1.54e-01	3.33e-01	2.66e-04	7.33e+00	7.28e+00	8.07e+00	1.28e-01	1.23e-01	2.13e-01	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.97e-04
chr2	27021363	27027998	ENSMUSG00000036067	0.5582	-	Slc2a6	protein_coding	5.96e-15	6.64e-13	-6.38e+00	8.23e+00	7.05e-02	1.46e+00	6.18e-04	8.08e+00	8.03e+00	8.58e+00	6.26e-02	6.05e-02	8.83e-02	1.58e+00	2.81e+00	0.00e+00	4.64e-04	1.39e-03	0.00e+00
chr2	144142488	144143373	ENSMUSG00000082480	0.5756	-	Gm11687	processed_pseudogene	6.39e-15	7.08e-13	6.28e+00	2.06e+00	2.66e-03	7.16e+00	2.68e-01	2.58e+00	1.58e+00	2.00e+00	3.99e-03	1.59e-03	2.39e-03	9.67e+00	4.32e+00	7.48e+00	6.49e-01	1.52e-02	1.41e-01
chr1	23761753	23849158	ENSMUSG00000026156	0.4316	+	B3gat2	protein_coding	7.32e-15	8.06e-13	-7.34e+00	7.33e+00	2.40e-02	0.00e+00	0.00e+00	7.13e+00	7.48e+00	7.38e+00	2.08e-02	2.65e-02	2.48e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	69871198	69885615	ENSMUSG00000051730	0.4007	-	Mettl5	protein_coding	1.03e-14	1.13e-12	-5.52e+00	1.02e+01	2.57e-01	4.48e+00	5.39e-03	1.04e+01	1.00e+01	1.02e+01	2.94e-01	2.23e-01	2.54e-01	4.64e+00	5.46e+00	3.32e+00	5.10e-03	9.14e-03	1.91e-03
chr11	69913888	69916591	ENSMUSG00000023170	0.5521	+	Gps2	protein_coding	1.12e-14	1.22e-12	-5.65e+00	9.24e+00	2.29e-01	3.24e+00	4.20e-03	8.95e+00	9.16e+00	9.62e+00	1.82e-01	2.12e-01	2.91e-01	4.32e+00	3.81e+00	1.58e+00	7.03e-03	4.81e-03	7.40e-04
chr19	5845623	5851388	ENSMUSG00000043488	0.5309	+	Frmd8os	antisense	1.15e-14	1.24e-12	-6.93e+00	7.34e+00	1.27e-01	3.33e-01	2.62e-04	7.52e+00	7.20e+00	7.29e+00	1.43e-01	1.15e-01	1.23e-01	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.87e-04
chr17	35994453	36038435	ENSMUSG00000092368	0.4683	+	A930015D03Rik	antisense	1.25e-14	1.34e-12	-6.79e+00	7.51e+00	1.46e-01	5.28e-01	5.32e-04	7.29e+00	7.49e+00	7.75e+00	1.24e-01	1.43e-01	1.71e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.59e-03	0.00e+00
chr11	69340461	69342641	ENSMUSG00000043419	0.4888	+	Chd3os	protein_coding	1.25e-14	1.34e-12	-5.80e+00	8.85e+00	1.73e-01	2.93e+00	2.74e-03	8.57e+00	9.03e+00	8.94e+00	1.41e-01	1.95e-01	1.83e-01	3.46e+00	3.32e+00	2.00e+00	3.73e-03	3.36e-03	1.12e-03
chr17	24527241	24534210	ENSMUSG00000079657	0.5366	-	Rab26	protein_coding	1.39e-14	1.47e-12	-7.03e+00	7.44e+00	4.88e-02	3.33e-01	9.39e-05	7.49e+00	7.34e+00	7.50e+00	5.04e-02	4.54e-02	5.07e-02	1.00e+00	0.00e+00	0.00e+00	2.82e-04	0.00e+00	0.00e+00
chr2	26916367	26920183	ENSMUSG00000014873	0.5258	+	Surf2	protein_coding	1.41e-14	1.49e-12	-5.33e+00	1.07e+01	1.02e+00	5.26e+00	2.48e-02	1.09e+01	1.06e+01	1.05e+01	1.19e+00	9.59e-01	9.16e-01	4.58e+00	5.25e+00	5.95e+00	1.42e-02	2.28e-02	3.76e-02
chr1	9908638	9942085	ENSMUSG00000046101	0.3985	+	Mcmdc2	protein_coding	1.59e-14	1.67e-12	-5.35e+00	1.04e+01	1.94e-01	4.09e+00	4.61e-03	1.06e+01	1.05e+01	1.02e+01	2.20e-01	1.96e-01	1.66e-01	5.73e+00	1.00e+00	5.55e+00	7.26e-03	1.40e-04	6.43e-03
chr17	23660523	23668610	ENSMUSG00000043782	0.5378	+	Ccdc64b	protein_coding	1.61e-14	1.68e-12	-7.22e+00	7.22e+00	9.27e-02	0.00e+00	0.00e+00	7.14e+00	7.26e+00	7.27e+00	8.75e-02	9.50e-02	9.56e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	180165238	180199602	ENSMUSG00000026489	0.5058	-	Coq8a	protein_coding	1.73e-14	1.80e-12	-5.97e+00	8.68e+00	2.55e-02	2.66e+00	3.47e-04	8.37e+00	9.02e+00	8.67e+00	2.02e-02	3.16e-02	2.48e-02	3.17e+00	2.81e+00	2.00e+00	4.89e-04	3.67e-04	1.83e-04
chr6	79048116	79048824	ENSMUSG00000107772	0.4993	+	Gm5311	processed_pseudogene	1.94e-14	2.00e-12	7.12e+00	3.33e-01	2.66e-04	6.24e+00	1.47e-01	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	0.00e+00	8.61e+00	2.81e+00	7.30e+00	3.11e-01	4.78e-03	1.25e-01
chr6	113326972	113335068	ENSMUSG00000030271	0.4803	+	Ogg1	protein_coding	2.14e-14	2.20e-12	-5.49e+00	9.61e+00	9.76e-02	3.86e+00	2.04e-03	9.64e+00	9.70e+00	9.48e+00	9.97e-02	1.04e-01	8.93e-02	4.75e+00	4.25e+00	2.58e+00	3.25e-03	2.25e-03	6.25e-04
chr5	120476526	120483932	ENSMUSG00000029597	0.5308	+	Sds	protein_coding	2.32e-14	2.36e-12	-7.19e+00	7.14e+00	5.05e-02	0.00e+00	0.00e+00	7.62e+00	7.04e+00	6.75e+00	6.85e-02	4.58e-02	3.74e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	180258540	180273496	ENSMUSG00000038990	0.5294	-	Cables2	protein_coding	2.32e-14	2.36e-12	-5.36e+00	1.06e+01	2.40e-01	5.23e+00	5.68e-03	1.05e+01	1.06e+01	1.08e+01	2.20e-01	2.33e-01	2.66e-01	5.43e+00	5.36e+00	4.91e+00	6.44e-03	6.14e-03	4.45e-03
chr14	69029289	69041401	ENSMUSG00000014813	0.4445	+	Stc1	protein_coding	2.42e-14	2.44e-12	5.78e+00	2.69e+00	1.85e-03	8.00e+00	1.14e-01	4.17e+00	1.58e+00	2.32e+00	4.09e-03	4.82e-04	9.63e-04	9.90e+00	5.36e+00	8.74e+00	2.30e-01	9.63e-03	1.03e-01
chr11	102436981	102447682	ENSMUSG00000034685	0.5747	-	Fam171a2	protein_coding	2.45e-14	2.46e-12	-5.34e+00	1.28e+01	1.75e+00	7.51e+00	4.29e-02	1.32e+01	1.29e+01	1.24e+01	2.19e+00	1.78e+00	1.29e+00	7.58e+00	7.64e+00	7.31e+00	4.48e-02	4.67e-02	3.72e-02
chr14	13918444	13949558	ENSMUSG00000079357	0.4247	+	Gm11100	antisense	2.53e-14	2.52e-12	-7.19e+00	7.13e+00	1.16e-01	0.00e+00	0.00e+00	6.54e+00	7.36e+00	7.51e+00	7.34e-02	1.30e-01	1.44e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	98571004	98589588	ENSMUSG00000022993	0.4567	+	4930415O20Rik	protein_coding	2.93e-14	2.91e-12	-7.20e+00	7.17e+00	1.05e-01	0.00e+00	0.00e+00	7.24e+00	7.45e+00	6.83e+00	1.09e-01	1.26e-01	8.18e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	109057933	109059734	ENSMUSG00000049734	0.5766	-	Trex1	protein_coding	2.95e-14	2.92e-12	-5.43e+00	9.50e+00	5.74e-01	4.09e+00	1.26e-02	9.32e+00	9.22e+00	9.97e+00	4.90e-01	4.58e-01	7.74e-01	4.39e+00	3.70e+00	4.17e+00	1.54e-02	9.24e-03	1.31e-02
chr10	79781474	79790961	ENSMUSG00000020323	0.5038	-	Prss57	protein_coding	3.89e-14	3.82e-12	-7.12e+00	7.12e+00	4.43e-02	0.00e+00	0.00e+00	7.28e+00	6.93e+00	7.14e+00	4.94e-02	3.88e-02	4.49e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	135963727	135968178	ENSMUSG00000028671	0.5833	+	Gale	protein_coding	4.40e-14	4.30e-12	-5.64e+00	8.44e+00	8.49e-02	2.69e+00	1.47e-03	7.97e+00	8.31e+00	9.05e+00	5.81e-02	7.35e-02	1.23e-01	3.17e+00	1.58e+00	3.32e+00	1.86e-03	4.65e-04	2.09e-03
chr11	100713850	100714575	ENSMUSG00000017832	0.5978	+	Hspb9	protein_coding	5.08e-14	4.94e-12	-7.10e+00	7.06e+00	1.21e-01	0.00e+00	0.00e+00	6.98e+00	6.69e+00	7.51e+00	1.11e-01	9.07e-02	1.61e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	94406151	94411682	ENSMUSG00000045464	0.4369	+	2810002D19Rik	processed_transcript	5.24e-14	5.07e-12	-5.64e+00	8.60e+00	3.57e-01	3.15e+00	6.38e-03	8.40e+00	7.77e+00	9.63e+00	2.68e-01	1.73e-01	6.30e-01	3.00e+00	3.00e+00	3.46e+00	5.58e-03	5.58e-03	7.97e-03
chr16	56477846	56690128	ENSMUSG00000035258	0.3922	+	Abi3bp	protein_coding	5.36e-14	5.15e-12	-6.74e+00	7.46e+00	7.57e-02	5.28e-01	2.86e-04	7.38e+00	7.32e+00	7.69e+00	7.07e-02	6.82e-02	8.83e-02	0.00e+00	1.58e+00	0.00e+00	0.00e+00	8.57e-04	0.00e+00
chr11	100627543	100692455	ENSMUSG00000014198	0.5052	-	Zfp385c	protein_coding	6.79e-14	6.49e-12	-7.17e+00	7.13e+00	2.27e-02	0.00e+00	0.00e+00	6.94e+00	7.58e+00	6.88e+00	1.93e-02	3.01e-02	1.86e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	88328655	88336148	ENSMUSG00000001420	0.5149	-	Tmem79	protein_coding	6.94e-14	6.60e-12	-6.14e+00	7.84e+00	6.54e-02	1.27e+00	6.53e-04	7.53e+00	7.76e+00	8.24e+00	5.15e-02	6.05e-02	8.43e-02	0.00e+00	1.00e+00	2.81e+00	0.00e+00	2.80e-04	1.68e-03
chr3	108555467	108556904	ENSMUSG00000105810	0.4103	+	Gm43435	TEC	8.16e-14	7.72e-12	-6.09e+00	7.80e+00	1.80e-01	1.27e+00	1.86e-03	8.01e+00	7.43e+00	7.96e+00	2.04e-01	1.37e-01	1.98e-01	2.81e+00	1.00e+00	0.00e+00	4.78e-03	7.97e-04	0.00e+00
chr2	118388618	118475234	ENSMUSG00000005102	0.4479	+	Eif2ak4	protein_coding	9.52e-14	8.96e-12	-5.28e+00	9.69e+00	1.39e-01	4.35e+00	3.43e-03	9.56e+00	9.90e+00	9.60e+00	1.27e-01	1.60e-01	1.30e-01	4.64e+00	4.70e+00	3.70e+00	4.04e-03	4.21e-03	2.02e-03
chr2	164839518	164857711	ENSMUSG00000017754	0.4954	-	Pltp	protein_coding	1.06e-13	9.96e-12	-5.23e+00	1.01e+01	2.06e-01	4.71e+00	5.30e-03	1.01e+01	1.02e+01	9.94e+00	2.10e-01	2.25e-01	1.84e-01	5.00e+00	5.43e+00	3.70e+00	5.80e-03	7.86e-03	2.25e-03
chr17	34597862	34600936	ENSMUSG00000015452	0.5626	+	Ager	protein_coding	1.08e-13	1.01e-11	-6.73e+00	7.44e+00	6.78e-02	5.28e-01	2.57e-04	7.31e+00	7.24e+00	7.78e+00	6.10e-02	5.79e-02	8.45e-02	0.00e+00	1.58e+00	0.00e+00	0.00e+00	7.72e-04	0.00e+00
chr3	95296096	95307176	ENSMUSG00000015702	0.4791	-	Anxa9	protein_coding	1.21e-13	1.12e-11	-6.42e+00	7.41e+00	5.33e-02	6.67e-01	3.12e-04	7.33e+00	7.18e+00	7.71e+00	5.00e-02	4.50e-02	6.50e-02	0.00e+00	2.00e+00	0.00e+00	0.00e+00	9.37e-04	0.00e+00
chr6	52162417	52164831	ENSMUSG00000014704	0.4965	-	Hoxa2	protein_coding	1.40e-13	1.29e-11	-6.17e+00	7.72e+00	1.24e-01	1.53e+00	1.16e-03	7.52e+00	7.50e+00	8.13e+00	1.06e-01	1.04e-01	1.63e-01	1.00e+00	1.58e+00	2.00e+00	5.80e-04	1.16e-03	1.74e-03
chr4	118362743	118409273	ENSMUSG00000033253	0.5204	-	Szt2	protein_coding	1.81e-13	1.66e-11	-5.51e+00	8.56e+00	2.70e-02	2.98e+00	5.24e-04	8.63e+00	8.48e+00	8.59e+00	2.82e-02	2.55e-02	2.75e-02	2.32e+00	3.17e+00	3.46e+00	2.86e-04	5.72e-04	7.15e-04
chr11	102835849	102838040	ENSMUSG00000020928	0.5192	+	Higd1b	protein_coding	2.02e-13	1.84e-11	-7.01e+00	6.98e+00	9.69e-02	0.00e+00	0.00e+00	6.88e+00	7.42e+00	6.63e+00	8.83e-02	1.28e-01	7.40e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	73476447	73477353	ENSMUSG00000082039	0.5413	-	Gm15653	processed_pseudogene	2.22e-13	2.01e-11	7.00e+00	6.67e-01	5.32e-04	6.36e+00	1.69e-01	1.00e+00	1.00e+00	0.00e+00	7.97e-04	7.97e-04	0.00e+00	8.94e+00	3.00e+00	7.13e+00	3.90e-01	5.58e-03	1.11e-01
chr10	22645011	22704285	ENSMUSG00000037490	0.4509	+	Slc2a12	protein_coding	2.42e-13	2.19e-11	-6.68e+00	7.32e+00	3.68e-02	6.67e-01	1.44e-04	8.03e+00	7.19e+00	6.73e+00	5.63e-02	3.14e-02	2.27e-02	0.00e+00	1.00e+00	1.00e+00	0.00e+00	2.17e-04	2.17e-04
chr4	116551740	116552627	ENSMUSG00000087299	0.4077	+	Gm12953	antisense	2.75e-13	2.48e-11	-6.10e+00	7.45e+00	1.45e-01	1.19e+00	1.33e-03	8.01e+00	7.29e+00	7.06e+00	2.04e-01	1.24e-01	1.05e-01	2.00e+00	0.00e+00	1.58e+00	2.39e-03	0.00e+00	1.59e-03
chr13	28943048	28951671	ENSMUSG00000097461	0.4381	+	Gm26735	lincRNA	2.81e-13	2.51e-11	-6.84e+00	6.81e+00	9.06e-02	0.00e+00	0.00e+00	6.43e+00	6.93e+00	7.09e+00	6.78e-02	9.65e-02	1.08e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	116410077	116461178	ENSMUSG00000025701	0.4476	-	Alox5	protein_coding	2.82e-13	2.51e-11	-6.17e+00	7.58e+00	2.82e-02	1.19e+00	2.46e-04	7.64e+00	7.69e+00	7.41e+00	2.92e-02	3.04e-02	2.50e-02	1.58e+00	0.00e+00	2.00e+00	2.95e-04	0.00e+00	4.43e-04
chr8	70766579	70768220	ENSMUSG00000110575	0.5542	+	RP23-410L16.8	TEC	2.84e-13	2.52e-11	-6.97e+00	6.96e+00	9.91e-02	0.00e+00	0.00e+00	6.88e+00	6.88e+00	7.13e+00	9.33e-02	9.33e-02	1.11e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	71111428	71123222	ENSMUSG00000021078	0.4487	+	Tomm20l	protein_coding	3.62e-13	3.19e-11	-7.07e+00	7.05e+00	9.70e-02	0.00e+00	0.00e+00	7.37e+00	7.03e+00	6.74e+00	1.19e-01	9.46e-02	7.71e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	98786604	98901484	ENSMUSG00000051166	0.3893	-	Eml5	protein_coding	3.81e-13	3.34e-11	-7.03e+00	7.01e+00	2.60e-02	0.00e+00	0.00e+00	7.33e+00	7.03e+00	6.66e+00	3.20e-02	2.60e-02	2.00e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	158067186	158076112	ENSMUSG00000104597	0.4073	-	B230334C09Rik	antisense	3.82e-13	3.34e-11	-7.09e+00	7.08e+00	1.08e-01	0.00e+00	0.00e+00	7.34e+00	6.91e+00	6.99e+00	1.28e-01	9.49e-02	1.00e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	122323223	122354233	ENSMUSG00000038569	0.4535	-	Rad9b	protein_coding	3.86e-13	3.35e-11	-5.90e+00	7.77e+00	3.38e-02	1.72e+00	4.13e-04	7.73e+00	7.69e+00	7.89e+00	3.27e-02	3.19e-02	3.67e-02	1.58e+00	2.58e+00	1.00e+00	3.10e-04	7.74e-04	1.55e-04
chr6	88503605	88504277	ENSMUSG00000107659	0.5721	+	Gm44170	antisense	3.93e-13	3.40e-11	-6.74e+00	7.14e+00	1.13e-01	3.33e-01	2.66e-04	7.38e+00	7.03e+00	7.01e+00	1.32e-01	1.04e-01	1.02e-01	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	0.00e+00
chr15	102497649	102517064	ENSMUSG00000023050	0.4753	-	Map3k12	protein_coding	4.50e-13	3.88e-11	-4.97e+00	1.04e+01	1.83e-01	5.44e+00	5.70e-03	1.05e+01	1.06e+01	1.02e+01	1.86e-01	2.05e-01	1.58e-01	5.09e+00	5.61e+00	5.61e+00	4.37e-03	6.36e-03	6.36e-03
chr8	121598703	121652901	ENSMUSG00000061410	0.5160	-	Zcchc14	protein_coding	4.85e-13	4.16e-11	-4.98e+00	1.07e+01	2.34e-01	5.77e+00	7.32e-03	1.05e+01	1.03e+01	1.13e+01	1.96e-01	1.72e-01	3.35e-01	5.86e+00	5.67e+00	5.78e+00	7.77e-03	6.82e-03	7.36e-03
chr10	79860475	79874634	ENSMUSG00000035835	0.5350	-	Plppr3	protein_coding	5.16e-13	4.41e-11	-5.17e+00	8.73e+00	5.62e-02	3.43e+00	1.44e-03	8.68e+00	9.06e+00	8.46e+00	5.34e-02	6.94e-02	4.59e-02	3.46e+00	2.58e+00	4.25e+00	1.31e-03	6.54e-04	2.35e-03
chr5	114289166	114365357	ENSMUSG00000066952	0.4917	+	Myo1h	protein_coding	6.92e-13	5.87e-11	-5.51e+00	7.99e+00	4.83e-02	1.93e+00	8.77e-04	7.69e+00	8.00e+00	8.29e+00	3.85e-02	4.79e-02	5.84e-02	0.00e+00	2.32e+00	3.46e+00	0.00e+00	7.51e-04	1.88e-03
chr11	43670801	43671484	ENSMUSG00000083662	0.5044	+	Gm12152	processed_pseudogene	7.17e-13	6.06e-11	7.02e+00	3.33e-01	2.66e-04	5.85e+00	1.37e-01	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	8.82e+00	2.81e+00	5.91e+00	3.60e-01	4.78e-03	4.70e-02
chr10	128395934	128401224	ENSMUSG00000039878	0.5566	-	Slc39a5	protein_coding	7.60e-13	6.37e-11	-6.86e+00	6.86e+00	8.44e-02	0.00e+00	0.00e+00	6.95e+00	6.89e+00	6.73e+00	9.00e-02	8.63e-02	7.68e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	45896941	45917413	ENSMUSG00000002781	0.5009	+	Tmem143	protein_coding	7.61e-13	6.37e-11	-5.07e+00	9.00e+00	6.01e-02	3.92e+00	1.68e-03	9.14e+00	9.05e+00	8.81e+00	6.59e-02	6.19e-02	5.24e-02	4.00e+00	4.17e+00	3.58e+00	1.76e-03	1.99e-03	1.29e-03
chr18	33796327	34007206	ENSMUSG00000024376	0.4489	-	Epb41l4a	protein_coding	7.71e-13	6.43e-11	-5.48e+00	8.28e+00	1.37e-01	2.68e+00	2.64e-03	8.32e+00	8.34e+00	8.19e+00	1.41e-01	1.42e-01	1.28e-01	2.58e+00	3.46e+00	2.00e+00	2.20e-03	4.41e-03	1.32e-03
chr8	106603351	106670246	ENSMUSG00000000303	0.4703	+	Cdh1	protein_coding	8.44e-13	6.99e-11	6.19e+00	1.53e+00	4.83e-04	3.78e+00	5.28e-02	1.58e+00	1.00e+00	2.00e+00	4.83e-04	2.42e-04	7.25e-04	2.00e+00	0.00e+00	9.35e+00	7.25e-04	0.00e+00	1.58e-01
chr11	109473374	109573330	ENSMUSG00000020604	0.4726	+	Arsg	protein_coding	8.46e-13	6.99e-11	-5.33e+00	8.33e+00	9.33e-02	2.99e+00	2.03e-03	8.38e+00	8.26e+00	8.36e+00	9.63e-02	8.88e-02	9.49e-02	2.81e+00	3.00e+00	3.17e+00	1.74e-03	2.03e-03	2.32e-03
chr5	143464584	143505942	ENSMUSG00000039206	0.4889	+	Daglb	protein_coding	9.05e-13	7.44e-11	-4.94e+00	1.00e+01	1.38e-01	5.08e+00	4.37e-03	9.96e+00	9.81e+00	1.03e+01	1.32e-01	1.19e-01	1.64e-01	5.04e+00	5.25e+00	4.95e+00	4.23e-03	4.89e-03	3.97e-03

Download the DEG result list for CL_vs_CU.
Download the whole result list for CL_vs_CU.

DEG table for the contrast ML_vs_CL

The following table presents the top 10% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast ML_vs_CL. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right.

chromosome	start	end	gene_id	gc_content	strand	gene_name	biotype	p-value_deseq	FDR_deseq	log2_normalized_fold_change_ML_vs_CL	log2_normalized_mean_counts_ML	rpgm_normalized_mean_counts_ML	log2_normalized_mean_counts_CL	rpgm_normalized_mean_counts_CL	log2_normalized_counts_GK3R167-ML1	log2_normalized_counts_GK3R168-ML2	log2_normalized_counts_GK3R169-ML3	rpgm_normalized_counts_GK3R167-ML1	rpgm_normalized_counts_GK3R168-ML2	rpgm_normalized_counts_GK3R169-ML3	log2_normalized_counts_GK3R164-CL1	log2_normalized_counts_GK3R165-CL2	log2_normalized_counts_GK3R166-CL3	rpgm_normalized_counts_GK3R164-CL1	rpgm_normalized_counts_GK3R165-CL2	rpgm_normalized_counts_GK3R166-CL3
chr7	46711998	46715700	ENSMUSG00000040026	0.4807	-	Saa3	protein_coding	1.19e-20	2.16e-16	-7.125920	1.26e+01	1.37e+00	5.32e+00	9.58e-03	1.30e+01	1.24e+01	1.24e+01	1.77e+00	1.14e+00	1.19e+00	4.39e+00	5.43e+00	6.15e+00	4.36e-03	9.15e-03	1.52e-02
chr5	90759360	90761624	ENSMUSG00000029371	0.4190	+	Cxcl5	protein_coding	6.68e-11	4.33e-07	-4.342836	1.22e+01	2.03e+00	7.84e+00	9.95e-02	1.24e+01	1.24e+01	1.18e+01	2.25e+00	2.32e+00	1.51e+00	7.36e+00	8.26e+00	7.90e+00	6.89e-02	1.29e-01	1.01e-01
chr3	19957054	20009145	ENSMUSG00000003617	0.3946	+	Cp	protein_coding	7.15e-11	4.33e-07	-5.019900	7.53e+00	9.14e-03	2.10e+00	2.36e-04	8.07e+00	6.92e+00	7.60e+00	1.26e-02	5.66e-03	9.11e-03	3.70e+00	1.58e+00	1.00e+00	5.66e-04	9.44e-05	4.72e-05
chr11	82057823	82062955	ENSMUSG00000020676	0.4282	+	Ccl11	protein_coding	1.06e-10	4.83e-07	-4.748193	7.11e+00	7.50e-02	1.88e+00	2.28e-03	7.29e+00	7.51e+00	6.52e+00	8.17e-02	9.54e-02	4.79e-02	2.32e+00	3.32e+00	0.00e+00	2.11e-03	4.74e-03	0.00e+00
chr2	32384633	32388252	ENSMUSG00000026822	0.5470	-	Lcn2	protein_coding	5.13e-10	1.87e-06	-5.426265	5.96e+00	1.35e-02	5.28e-01	1.27e-04	6.74e+00	4.81e+00	6.32e+00	2.02e-02	5.14e-03	1.51e-02	1.58e+00	0.00e+00	0.00e+00	3.81e-04	0.00e+00	0.00e+00
chr7	142575529	142578143	ENSMUSG00000000031	0.5583	-	H19	lincRNA	4.95e-09	1.50e-05	-4.518325	6.02e+00	3.21e-02	1.39e+00	1.06e-03	5.83e+00	7.59e+00	4.64e+00	1.98e-02	6.80e-02	8.50e-03	1.00e+00	3.17e+00	0.00e+00	3.54e-04	2.83e-03	0.00e+00
chr1	72857932	72874884	ENSMUSG00000026185	0.4955	-	Igfbp5	protein_coding	5.39e-08	1.25e-04	-4.523562	6.30e+00	1.60e-02	1.39e+00	5.26e-04	5.29e+00	7.29e+00	6.34e+00	6.67e-03	2.72e-02	1.40e-02	3.17e+00	1.00e+00	0.00e+00	1.40e-03	1.75e-04	0.00e+00
chr8	109575128	109579172	ENSMUSG00000031722	0.5125	-	Hp	protein_coding	5.52e-08	1.25e-04	-4.551796	6.41e+00	2.99e-02	1.06e+00	9.38e-04	6.13e+00	6.58e+00	6.52e+00	2.43e-02	3.34e-02	3.20e-02	0.00e+00	3.17e+00	0.00e+00	0.00e+00	2.81e-03	0.00e+00
chr5	52533517	52566462	ENSMUSG00000039252	0.4713	-	Lgi2	protein_coding	5.62e-07	1.14e-03	-3.278781	8.50e+00	6.34e-02	5.18e+00	6.37e-03	8.38e+00	8.60e+00	8.51e+00	5.84e-02	6.79e-02	6.39e-02	5.39e+00	5.46e+00	4.70e+00	7.19e-03	7.54e-03	4.39e-03
chr2	126034658	126091185	ENSMUSG00000027208	0.4000	+	Fgf7	protein_coding	1.73e-06	3.14e-03	-3.560715	6.86e+00	2.83e-02	3.24e+00	2.18e-03	7.18e+00	6.82e+00	6.58e+00	3.48e-02	2.71e-02	2.30e-02	3.81e+00	2.58e+00	3.32e+00	3.15e-03	1.21e-03	2.18e-03
chr9	119335934	119341411	ENSMUSG00000032508	0.5215	-	Myd88	protein_coding	2.44e-06	4.04e-03	-3.425551	7.39e+00	3.72e-02	3.70e+00	3.26e-03	7.20e+00	7.46e+00	7.51e+00	3.25e-02	3.89e-02	4.03e-02	4.46e+00	4.32e+00	2.32e+00	4.67e-03	4.23e-03	8.90e-04
chr5	7960457	7982213	ENSMUSG00000012428	0.4035	+	Steap4	protein_coding	3.11e-06	4.71e-03	-3.960829	5.04e+00	1.21e-02	1.00e+00	4.58e-04	4.95e+00	5.86e+00	4.32e+00	1.03e-02	1.96e-02	6.53e-03	2.00e+00	1.00e+00	0.00e+00	1.03e-03	3.44e-04	0.00e+00
chr11	82045712	82047525	ENSMUSG00000035373	0.4311	+	Ccl7	protein_coding	6.39e-06	8.22e-03	-2.740065	1.03e+01	7.35e-01	7.52e+00	1.10e-01	1.04e+01	1.05e+01	9.92e+00	7.89e-01	8.41e-01	5.75e-01	7.42e+00	7.86e+00	7.27e+00	1.01e-01	1.37e-01	9.06e-02
chr11	99041244	99054392	ENSMUSG00000017493	0.5197	+	Igfbp4	protein_coding	6.43e-06	8.22e-03	-2.732122	1.02e+01	2.23e-01	7.44e+00	3.35e-02	1.02e+01	1.04e+01	1.00e+01	2.14e-01	2.58e-01	1.98e-01	7.11e+00	7.30e+00	7.91e+00	2.57e-02	2.95e-02	4.51e-02
chr2	164940780	164955850	ENSMUSG00000017737	0.5213	+	Mmp9	protein_coding	6.79e-06	8.22e-03	-2.787847	7.98e+00	5.70e-02	5.24e+00	8.07e-03	7.81e+00	8.67e+00	7.48e+00	4.74e-02	8.61e-02	3.76e-02	5.58e+00	5.43e+00	4.70e+00	9.99e-03	8.92e-03	5.31e-03
chr7	140967221	140969825	ENSMUSG00000025491	0.4868	+	Ifitm1	protein_coding	7.80e-06	8.86e-03	-3.470320	5.42e+00	2.98e-02	1.97e+00	2.06e-03	5.64e+00	5.75e+00	4.86e+00	3.37e-02	3.65e-02	1.93e-02	1.58e+00	2.00e+00	2.32e+00	1.38e-03	2.06e-03	2.75e-03
chr16	55811375	55838899	ENSMUSG00000035356	0.4493	-	Nfkbiz	protein_coding	9.22e-06	9.86e-03	-2.968010	7.20e+00	3.82e-02	4.24e+00	4.66e-03	6.98e+00	7.48e+00	7.15e+00	3.24e-02	4.58e-02	3.65e-02	4.32e+00	4.09e+00	4.32e+00	4.92e-03	4.14e-03	4.92e-03
chr19	16435667	16610818	ENSMUSG00000024697	0.4360	+	Gna14	protein_coding	1.08e-05	1.09e-02	3.493539	2.50e+00	2.10e-03	6.08e+00	2.77e-02	1.58e+00	3.32e+00	2.58e+00	7.87e-04	3.54e-03	1.97e-03	5.52e+00	6.69e+00	6.02e+00	1.77e-02	4.01e-02	2.52e-02
chr5	107106570	107289629	ENSMUSG00000029287	0.4522	-	Tgfbr3	protein_coding	1.31e-05	1.25e-02	-3.119435	6.93e+00	1.71e-02	3.72e+00	1.84e-03	6.85e+00	6.98e+00	6.95e+00	1.62e-02	1.77e-02	1.75e-02	3.46e+00	4.39e+00	3.32e+00	1.42e-03	2.84e-03	1.28e-03
chr16	15887286	15891031	ENSMUSG00000071637	0.5160	+	Cebpd	protein_coding	1.80e-05	1.63e-02	-2.696487	9.09e+00	1.40e-01	6.38e+00	2.14e-02	9.15e+00	8.97e+00	9.15e+00	1.45e-01	1.29e-01	1.46e-01	6.30e+00	6.71e+00	6.11e+00	2.00e-02	2.67e-02	1.74e-02
chr7	19808462	19822770	ENSMUSG00000053175	0.5283	-	Bcl3	protein_coding	2.24e-05	1.94e-02	-3.237039	7.04e+00	3.87e-02	3.77e+00	3.84e-03	6.99e+00	7.14e+00	7.00e+00	3.72e-02	4.13e-02	3.75e-02	3.81e+00	4.17e+00	3.32e+00	3.84e-03	5.02e-03	2.66e-03
chr16	78930948	78951733	ENSMUSG00000022860	0.3748	+	Chodl	protein_coding	2.40e-05	1.98e-02	3.371256	2.83e+00	1.08e-03	6.26e+00	1.26e-02	2.00e+00	3.17e+00	3.32e+00	4.84e-04	1.29e-03	1.45e-03	5.78e+00	6.32e+00	6.69e+00	8.72e-03	1.28e-02	1.65e-02
chr10	38965515	39110188	ENSMUSG00000019846	0.4082	+	Lama4	protein_coding	2.79e-05	2.20e-02	-2.827421	6.79e+00	1.56e-02	3.88e+00	2.08e-03	7.13e+00	7.35e+00	5.88e+00	1.81e-02	2.11e-02	7.55e-03	4.09e+00	4.75e+00	2.81e+00	2.08e-03	3.39e-03	7.81e-04
chr11	82035571	82037453	ENSMUSG00000035385	0.4376	+	Ccl2	protein_coding	2.99e-05	2.26e-02	-2.567529	1.20e+01	2.60e+00	9.35e+00	4.38e-01	1.20e+01	1.21e+01	1.18e+01	2.66e+00	2.80e+00	2.34e+00	9.14e+00	9.82e+00	9.09e+00	3.68e-01	5.91e-01	3.55e-01
chr19	21391307	21473445	ENSMUSG00000058624	0.4122	-	Gda	protein_coding	5.31e-05	3.86e-02	-3.417853	5.83e+00	8.77e-03	2.11e+00	6.78e-04	5.98e+00	5.73e+00	5.78e+00	9.70e-03	8.14e-03	8.45e-03	1.00e+00	2.00e+00	3.32e+00	1.57e-04	4.70e-04	1.41e-03
chr10	88322804	88379080	ENSMUSG00000020057	0.4456	-	Dram1	protein_coding	8.06e-05	5.64e-02	-2.500265	7.14e+00	1.42e-02	4.54e+00	2.43e-03	7.14e+00	7.45e+00	6.83e+00	1.40e-02	1.74e-02	1.13e-02	4.09e+00	4.17e+00	5.36e+00	1.60e-03	1.70e-03	3.99e-03
chr2	84765387	84775444	ENSMUSG00000023224	0.4665	-	Serping1	protein_coding	9.64e-05	6.49e-02	-2.348563	9.02e+00	1.73e-01	6.67e+00	3.38e-02	8.55e+00	9.64e+00	8.86e+00	1.19e-01	2.54e-01	1.47e-01	6.61e+00	7.27e+00	6.13e+00	3.08e-02	4.86e-02	2.19e-02
chr8	23411502	23449632	ENSMUSG00000031548	0.4776	+	Sfrp1	protein_coding	1.16e-04	7.56e-02	-2.522806	7.18e+00	3.59e-02	4.77e+00	6.06e-03	6.60e+00	8.00e+00	6.95e+00	2.18e-02	5.80e-02	2.80e-02	4.70e+00	4.52e+00	5.09e+00	5.68e-03	5.00e-03	7.50e-03
chr9	7445822	7455975	ENSMUSG00000043613	0.4079	+	Mmp3	protein_coding	1.39e-04	8.73e-02	-2.833990	5.68e+00	3.49e-02	1.77e+00	4.33e-03	5.73e+00	6.30e+00	5.00e+00	3.38e-02	5.07e-02	2.01e-02	1.00e+00	4.32e+00	0.00e+00	6.50e-04	1.23e-02	0.00e+00

Download the DEG result list for ML_vs_CL.
Download the whole result list for ML_vs_CL.

DEG table for the contrast MI_vs_CI

The following table presents the top 10% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast MI_vs_CI. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right.

chromosome	start	end	gene_id	gc_content	strand	gene_name	biotype	p-value_deseq	FDR_deseq	log2_normalized_fold_change_MI_vs_CI	log2_normalized_mean_counts_MI	rpgm_normalized_mean_counts_MI	log2_normalized_mean_counts_CI	rpgm_normalized_mean_counts_CI	log2_normalized_counts_GK3R143_MI1	log2_normalized_counts_GK3R144_MI2	log2_normalized_counts_GK3R145_MI3	rpgm_normalized_counts_GK3R143_MI1	rpgm_normalized_counts_GK3R144_MI2	rpgm_normalized_counts_GK3R145_MI3	log2_normalized_counts_GK3R149_CI1	log2_normalized_counts_GK3R150_CI2	log2_normalized_counts_GK3R151_CI3r	rpgm_normalized_counts_GK3R149_CI1	rpgm_normalized_counts_GK3R150_CI2	rpgm_normalized_counts_GK3R151_CI3r
chr1	153740349	153745468	ENSMUSG00000026475	0.5045	+	Rgs16	protein_coding	3.64e-18	6.62e-14	6.731058	4.03e+00	5.70e-03	9.15e+00	6.42e-01	4.25e+00	4.52e+00	3.32e+00	6.28e-03	7.67e-03	3.14e-03	7.83e+00	7.29e+00	1.23e+01	7.92e-02	5.44e-02	1.79e+00
chrX	151198078	151320152	ENSMUSG00000041245	0.3763	+	Wnk3	protein_coding	1.75e-17	1.59e-13	7.317001	1.46e+00	1.09e-04	5.27e+00	2.39e-02	1.58e+00	2.81e+00	0.00e+00	8.19e-05	2.46e-04	0.00e+00	3.46e+00	1.58e+00	1.08e+01	4.09e-04	8.19e-05	7.12e-02
chr2	143150830	143151630	ENSMUSG00000083047	0.4906	-	Gm14082	processed_pseudogene	3.01e-16	1.82e-12	7.209453	0.00e+00	0.00e+00	4.45e+00	1.17e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	3.00e+00	8.76e+00	1.58e+00	5.58e-03	3.44e-01	1.59e-03
chr11	100228845	100232078	ENSMUSG00000084257	0.4858	-	Gm11597	unprocessed_pseudogene	6.93e-16	3.15e-12	7.386581	0.00e+00	0.00e+00	2.99e+00	1.33e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	8.97e+00	0.00e+00	0.00e+00	3.98e-01	0.00e+00
chr7	46711998	46715700	ENSMUSG00000040026	0.4807	-	Saa3	protein_coding	3.82e-15	1.39e-11	5.783393	8.22e+00	6.71e-02	1.40e+01	3.71e+00	8.48e+00	8.52e+00	7.67e+00	7.77e-02	7.95e-02	4.42e-02	1.41e+01	1.43e+01	1.38e+01	3.78e+00	4.25e+00	3.10e+00
chr6	70726435	70726966	ENSMUSG00000076609	0.4925	+	Igkc	IG_C_gene	8.45e-15	2.56e-11	7.714246	0.00e+00	0.00e+00	4.03e+00	1.73e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	9.28e+00	0.00e+00	2.81e+00	5.14e-01	0.00e+00	4.97e-03
chr5	138178617	138187451	ENSMUSG00000036980	0.4926	-	Taf6	protein_coding	1.97e-14	5.12e-11	5.612734	5.77e+00	3.62e-03	8.05e+00	1.80e-01	5.70e+00	5.78e+00	5.83e+00	3.44e-03	3.64e-03	3.78e-03	4.81e+00	6.39e+00	1.30e+01	1.82e-03	5.60e-03	5.33e-01
chr5	92257659	92278170	ENSMUSG00000029413	0.4622	-	Naaa	protein_coding	2.49e-14	5.66e-11	5.585382	6.15e+00	1.40e-02	8.49e+00	6.82e-01	6.25e+00	6.29e+00	5.93e+00	1.49e-02	1.53e-02	1.19e-02	6.48e+00	5.67e+00	1.33e+01	1.74e-02	9.91e-03	2.02e+00
chr10	130412499	130413312	ENSMUSG00000040540	0.5614	+	Gm9770	pseudogene	3.00e-14	6.06e-11	5.655564	4.75e+00	2.07e-02	6.19e+00	1.08e+00	4.81e+00	4.58e+00	4.86e+00	2.15e-02	1.83e-02	2.23e-02	3.00e+00	3.58e+00	1.20e+01	5.58e-03	8.77e-03	3.24e+00
chr1	172066013	172082795	ENSMUSG00000003458	0.4695	-	Ncstn	protein_coding	3.02e-13	5.48e-10	5.273709	6.14e+00	3.48e-03	8.08e+00	1.37e-01	5.73e+00	6.30e+00	6.39e+00	2.55e-03	3.83e-03	4.07e-03	5.46e+00	5.78e+00	1.30e+01	2.11e-03	2.65e-03	4.05e-01
chr11	82057823	82062955	ENSMUSG00000020676	0.4282	+	Ccl11	protein_coding	5.08e-13	8.39e-10	5.716668	2.39e+00	2.46e-03	8.18e+00	1.56e-01	3.00e+00	1.58e+00	2.58e+00	3.69e-03	1.05e-03	2.63e-03	8.30e+00	8.53e+00	7.70e+00	1.66e-01	1.94e-01	1.09e-01
chr8	106603351	106670246	ENSMUSG00000000303	0.4703	+	Cdh1	protein_coding	1.90e-12	2.88e-09	5.977280	7.74e-01	3.22e-04	6.27e+00	3.53e-02	2.32e+00	0.00e+00	0.00e+00	9.66e-04	0.00e+00	0.00e+00	7.86e+00	7.63e+00	3.32e+00	5.61e-02	4.76e-02	2.17e-03
chr12	113254830	113260236	ENSMUSG00000095079	0.5130	-	Igha	IG_C_gene	2.45e-12	3.43e-09	7.273018	0.00e+00	0.00e+00	5.35e+00	3.90e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	8.66e+00	1.58e+00	5.81e+00	1.02e-01	5.07e-04	1.39e-02
chr5	149368476	149430682	ENSMUSG00000107314	0.4719	+	Gm20488	processed_transcript	1.12e-11	1.45e-08	4.850954	6.20e+00	5.77e-02	7.81e+00	1.69e+00	6.11e+00	6.23e+00	6.25e+00	5.42e-02	5.90e-02	5.98e-02	5.36e+00	5.46e+00	1.26e+01	3.19e-02	3.43e-02	4.99e+00
chr3	97125511	97126113	ENSMUSG00000106324	0.4196	-	Gm43222	processed_pseudogene	1.71e-11	2.07e-08	6.617651	5.28e-01	5.32e-04	4.68e+00	1.30e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.59e-03	0.00e+00	2.32e+00	8.90e+00	2.81e+00	3.19e-03	3.81e-01	4.78e-03
chr2	9857078	9890034	ENSMUSG00000015619	0.4826	-	Gata3	protein_coding	2.19e-11	2.49e-08	5.057450	2.69e+00	8.61e-04	6.78e+00	3.36e-02	2.58e+00	2.32e+00	3.17e+00	7.60e-04	6.08e-04	1.22e-03	7.11e+00	8.99e+00	4.25e+00	2.08e-02	7.72e-02	2.74e-03
chr11	12936834	12937938	ENSMUSG00000083859	0.5231	-	Gm12003	processed_pseudogene	6.96e-11	7.44e-08	5.733957	1.30e+00	1.59e-03	5.46e+00	1.27e-01	0.00e+00	2.32e+00	1.58e+00	0.00e+00	3.19e-03	1.59e-03	3.32e+00	8.81e+00	4.25e+00	7.18e-03	3.58e-01	1.44e-02
chr7	142575529	142578143	ENSMUSG00000000031	0.5583	-	H19	lincRNA	1.67e-10	1.68e-07	5.634206	1.30e+00	7.08e-04	5.99e+00	5.24e-02	2.32e+00	0.00e+00	1.58e+00	1.42e-03	0.00e+00	7.08e-04	5.81e+00	8.57e+00	3.58e+00	1.95e-02	1.34e-01	3.90e-03
chr13	8940336	8940977	ENSMUSG00000061988	0.5171	-	Rpl10a-ps2	processed_pseudogene	1.91e-10	1.82e-07	4.960002	2.33e+00	3.46e-03	5.65e+00	1.32e-01	1.58e+00	2.81e+00	2.58e+00	1.59e-03	4.78e-03	3.99e-03	4.52e+00	8.85e+00	3.58e+00	1.75e-02	3.68e-01	8.77e-03
chr6	78370657	78373466	ENSMUSG00000071356	0.4171	+	Reg3b	protein_coding	5.69e-10	5.17e-07	6.604862	0.00e+00	0.00e+00	4.71e+00	3.54e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	7.66e+00	0.00e+00	6.48e+00	7.40e-02	0.00e+00	3.24e-02
chr3	19957054	20009145	ENSMUSG00000003617	0.3946	+	Cp	protein_coding	3.28e-09	2.84e-06	4.509861	2.54e+00	3.15e-04	7.42e+00	8.19e-03	3.81e+00	2.81e+00	1.00e+00	6.13e-04	2.83e-04	4.72e-05	7.80e+00	7.28e+00	7.19e+00	1.05e-02	7.27e-03	6.84e-03
chr2	32384633	32388252	ENSMUSG00000026822	0.5470	-	Lcn2	protein_coding	6.39e-09	5.28e-06	4.828417	2.46e+00	8.89e-04	7.25e+00	3.05e-02	2.00e+00	2.81e+00	2.58e+00	5.72e-04	1.14e-03	9.53e-04	7.83e+00	6.66e+00	7.28e+00	4.31e-02	1.91e-02	2.93e-02
chr5	90759360	90761624	ENSMUSG00000029371	0.4190	+	Cxcl5	protein_coding	7.14e-09	5.64e-06	3.927099	9.98e+00	4.40e-01	1.39e+01	6.70e+00	9.67e+00	1.04e+01	9.84e+00	3.43e-01	5.89e-01	3.87e-01	1.38e+01	1.43e+01	1.37e+01	6.04e+00	8.26e+00	5.79e+00
chr5	149411749	149431723	ENSMUSG00000029659	0.4657	+	Medag	protein_coding	9.57e-09	7.24e-06	3.966509	7.09e+00	3.17e-02	8.52e+00	4.99e-01	6.74e+00	7.37e+00	7.15e+00	2.45e-02	3.80e-02	3.26e-02	6.30e+00	6.63e+00	1.26e+01	1.81e-02	2.27e-02	1.46e+00
chr6	39653450	39653965	ENSMUSG00000091313	0.4845	-	Fth-ps2	processed_pseudogene	1.05e-08	7.66e-06	5.203872	1.19e+00	1.06e-03	5.08e+00	6.78e-02	1.58e+00	1.00e+00	1.00e+00	1.59e-03	7.97e-04	7.97e-04	4.39e+00	7.84e+00	3.00e+00	1.59e-02	1.82e-01	5.58e-03
chr3	95410346	95411207	ENSMUSG00000096177	0.5580	-	Gm5070	processed_pseudogene	1.40e-08	9.37e-06	4.220876	2.46e+00	3.72e-03	4.87e+00	8.35e-02	2.00e+00	2.81e+00	2.58e+00	2.39e-03	4.78e-03	3.99e-03	2.81e+00	8.22e+00	3.58e+00	4.78e-03	2.37e-01	8.77e-03
chr5	5736317	5749326	ENSMUSG00000015652	0.4145	-	Steap1	protein_coding	1.41e-08	9.37e-06	3.904712	7.86e+00	8.87e-02	9.98e+00	1.33e+00	8.08e+00	7.98e+00	7.52e+00	1.02e-01	9.49e-02	6.92e-02	8.48e+00	8.20e+00	1.33e+01	1.34e-01	1.11e-01	3.76e+00
chr17	56119680	56121946	ENSMUSG00000037095	0.5880	-	Lrg1	protein_coding	1.44e-08	9.37e-06	-6.841302	2.81e+00	7.50e-02	0.00e+00	0.00e+00	0.00e+00	8.42e+00	0.00e+00	0.00e+00	2.25e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	3488850	3512814	ENSMUSG00000109865	0.4387	-	Hspa14	protein_coding	3.61e-08	2.26e-05	3.817136	6.39e+00	1.29e-02	8.17e+00	1.85e-01	6.43e+00	6.38e+00	6.38e+00	1.33e-02	1.28e-02	1.28e-02	6.52e+00	6.27e+00	1.17e+01	1.42e-02	1.19e-02	5.28e-01
chr11	43596049	43601540	ENSMUSG00000020405	0.4468	-	Fabp6	protein_coding	4.77e-08	2.89e-05	6.235216	0.00e+00	0.00e+00	4.53e+00	5.64e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	7.02e+00	0.00e+00	6.57e+00	9.79e-02	0.00e+00	7.14e-02
chr14	69029289	69041401	ENSMUSG00000014813	0.4445	+	Stc1	protein_coding	6.60e-08	3.87e-05	4.057783	2.87e+00	1.85e-03	6.53e+00	3.45e-02	3.70e+00	3.32e+00	1.58e+00	2.89e-03	2.17e-03	4.82e-04	5.83e+00	8.39e+00	5.36e+00	1.35e-02	8.04e-02	9.63e-03
chr19	21391307	21473445	ENSMUSG00000058624	0.4122	-	Gda	protein_coding	7.43e-08	4.22e-05	5.303781	8.62e-01	1.57e-04	6.29e+00	1.22e-02	1.58e+00	0.00e+00	1.00e+00	3.13e-04	0.00e+00	1.57e-04	6.00e+00	6.43e+00	6.44e+00	9.86e-03	1.33e-02	1.35e-02
chr17	32196274	32284722	ENSMUSG00000024002	0.4433	-	Brd4	protein_coding	8.95e-08	4.93e-05	3.223941	7.04e+00	9.00e-03	9.07e+00	8.47e-02	7.32e+00	6.73e+00	7.06e+00	1.08e-02	7.16e-03	9.00e-03	1.17e+01	7.72e+00	7.81e+00	2.24e-01	1.43e-02	1.53e-02
chr17	57203970	57228136	ENSMUSG00000024164	0.5201	-	C3	protein_coding	9.64e-08	5.15e-05	3.898120	3.44e+00	2.63e-03	7.33e+00	4.28e-02	3.46e+00	3.17e+00	3.70e+00	2.63e-03	2.10e-03	3.15e-03	7.04e+00	7.29e+00	7.67e+00	3.44e-02	4.10e-02	5.31e-02
chr8	84686307	84699808	ENSMUSG00000001909	0.5134	+	Trmt1	protein_coding	1.43e-07	7.35e-05	3.590668	7.81e+00	1.59e-02	9.34e+00	1.92e-01	7.89e+00	7.74e+00	7.79e+00	1.69e-02	1.52e-02	1.57e-02	7.21e+00	7.89e+00	1.29e+01	1.05e-02	1.69e-02	5.50e-01
chr2	181147653	181157014	ENSMUSG00000016349	0.5490	-	Eef1a2	protein_coding	1.47e-07	7.35e-05	4.938599	0.00e+00	0.00e+00	4.40e+00	1.88e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	3.00e+00	6.04e+00	4.17e+00	4.43e-03	4.11e-02	1.08e-02
chr1	155844964	155973255	ENSMUSG00000033671	0.4031	-	Cep350	protein_coding	1.50e-07	7.35e-05	3.678735	5.81e+00	5.64e-03	7.57e+00	7.34e-02	5.52e+00	5.93e+00	5.98e+00	4.56e-03	6.08e-03	6.28e-03	5.88e+00	5.83e+00	1.10e+01	5.88e-03	5.67e-03	2.09e-01
chr10	43578284	43584265	ENSMUSG00000047139	0.4982	+	Cd24a	protein_coding	1.80e-07	8.61e-05	3.849935	3.89e+00	4.91e-03	7.45e+00	7.41e-02	5.49e+00	3.17e+00	3.00e+00	1.10e-02	2.00e-03	1.75e-03	6.19e+00	9.49e+00	6.67e+00	1.80e-02	1.79e-01	2.52e-02
chr7	140967221	140969825	ENSMUSG00000025491	0.4868	+	Ifitm1	protein_coding	2.00e-07	9.32e-05	4.311202	3.01e+00	5.51e-03	7.41e+00	1.22e-01	2.00e+00	3.32e+00	3.70e+00	2.06e-03	6.19e-03	8.26e-03	7.37e+00	7.97e+00	6.91e+00	1.13e-01	1.72e-01	8.19e-02
chr6	79048116	79048824	ENSMUSG00000107772	0.4993	+	Gm5311	processed_pseudogene	2.17e-07	9.87e-05	4.731804	1.06e+00	1.06e-03	2.84e+00	4.86e-02	1.58e+00	1.58e+00	0.00e+00	1.59e-03	1.59e-03	0.00e+00	1.00e+00	7.52e+00	0.00e+00	7.97e-04	1.45e-01	0.00e+00
chr9	7445822	7455975	ENSMUSG00000043613	0.4079	+	Mmp3	protein_coding	2.28e-07	9.94e-05	4.311202	2.86e+00	5.20e-03	7.37e+00	1.15e-01	1.58e+00	4.00e+00	3.00e+00	1.30e-03	9.75e-03	4.55e-03	6.94e+00	8.14e+00	7.02e+00	7.93e-02	1.83e-01	8.38e-02
chr16	20498817	20509955	ENSMUSG00000003235	0.4831	+	Eif2b5	protein_coding	2.30e-07	9.94e-05	3.527326	7.75e+00	9.68e-02	9.13e+00	1.12e+00	7.91e+00	7.66e+00	7.69e+00	1.07e-01	9.04e-02	9.26e-02	7.29e+00	7.29e+00	1.28e+01	6.97e-02	7.01e-02	3.22e+00
chr3	152153447	152154116	ENSMUSG00000084343	0.5194	+	Gm16198	processed_pseudogene	2.46e-07	1.04e-04	4.722466	5.28e-01	5.32e-04	3.43e+00	3.43e-02	0.00e+00	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.59e-03	1.00e+00	6.97e+00	2.32e+00	7.97e-04	9.89e-02	3.19e-03
chr9	104084157	104126933	ENSMUSG00000079355	0.4469	-	Ackr4	protein_coding	2.64e-07	1.09e-04	-3.372145	1.08e+01	5.77e-01	7.39e+00	5.54e-02	1.04e+01	1.09e+01	1.10e+01	4.42e-01	6.23e-01	6.67e-01	7.73e+00	7.17e+00	7.28e+00	6.91e-02	4.68e-02	5.04e-02
chr2	164940780	164955850	ENSMUSG00000017737	0.5213	+	Mmp9	protein_coding	3.43e-07	1.38e-04	3.464176	5.51e+00	9.56e-03	8.83e+00	1.08e-01	5.70e+00	5.61e+00	5.21e+00	1.08e-02	1.02e-02	7.65e-03	8.58e+00	9.73e+00	8.17e+00	8.10e-02	1.81e-01	6.12e-02
chr4	133574745	133584243	ENSMUSG00000028850	0.5004	+	Gpatch3	protein_coding	3.93e-07	1.55e-04	4.153437	3.77e+00	4.68e-03	6.42e+00	8.91e-02	3.00e+00	4.39e+00	3.91e+00	2.40e-03	6.85e-03	4.80e-03	4.58e+00	5.17e+00	9.50e+00	7.88e-03	1.20e-02	2.47e-01
chr5	30013114	30019981	ENSMUSG00000025746	0.4078	+	Il6	protein_coding	4.51e-07	1.74e-04	4.337525	2.88e+00	2.28e-03	7.19e+00	5.27e-02	2.58e+00	3.46e+00	2.58e+00	1.71e-03	3.42e-03	1.71e-03	7.25e+00	6.52e+00	7.79e+00	5.17e-02	3.11e-02	7.53e-02
chr11	99041244	99054392	ENSMUSG00000017493	0.5197	+	Igfbp4	protein_coding	5.56e-07	2.11e-04	3.192034	7.56e+00	3.68e-02	1.08e+01	3.38e-01	7.38e+00	7.19e+00	8.11e+00	3.12e-02	2.73e-02	5.19e-02	1.08e+01	1.12e+01	1.02e+01	3.41e-01	4.45e-01	2.27e-01
chrX	90744546	90745062	ENSMUSG00000084289	0.4565	-	Gm6977	processed_pseudogene	7.47e-07	2.77e-04	3.327431	5.68e+00	4.09e-02	8.79e+00	4.18e-01	6.04e+00	5.39e+00	5.61e+00	5.18e-02	3.27e-02	3.83e-02	8.30e+00	9.93e+00	8.15e+00	2.51e-01	7.78e-01	2.26e-01
chr2	164562413	164568510	ENSMUSG00000017723	0.5202	+	Wfdc2	protein_coding	7.85e-07	2.85e-04	5.297681	0.00e+00	0.00e+00	3.91e+00	7.76e-03	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	5.83e+00	5.91e+00	0.00e+00	1.13e-02	1.19e-02	0.00e+00
chr15	62980648	62981817	ENSMUSG00000106988	0.4496	+	Tsg101-ps	processed_pseudogene	8.04e-07	2.86e-04	3.955606	3.45e+00	7.97e-03	6.21e+00	1.35e-01	3.32e+00	3.32e+00	3.70e+00	7.18e-03	7.18e-03	9.57e-03	5.17e+00	4.64e+00	8.82e+00	2.79e-02	1.91e-02	3.59e-01
chr17	34856374	34862518	ENSMUSG00000090231	0.5196	-	Cfb	protein_coding	8.29e-07	2.90e-04	3.385862	4.40e+00	2.96e-03	7.69e+00	3.24e-02	4.64e+00	4.17e+00	4.39e+00	3.50e-03	2.48e-03	2.92e-03	8.30e+00	7.86e+00	6.91e+00	4.59e-02	3.38e-02	1.73e-02
chr5	134945119	134946934	ENSMUSG00000047501	0.5683	-	Cldn4	protein_coding	8.82e-07	3.03e-04	4.815917	6.67e-01	5.02e-04	4.98e+00	2.78e-02	0.00e+00	2.00e+00	0.00e+00	0.00e+00	1.51e-03	0.00e+00	4.52e+00	7.09e+00	3.32e+00	1.10e-02	6.77e-02	4.52e-03
chr14	31478320	31495030	ENSMUSG00000021891	0.4589	-	Mettl6	protein_coding	1.07e-06	3.60e-04	3.483870	5.63e+00	1.89e-02	6.54e+00	2.16e-01	5.75e+00	5.52e+00	5.61e+00	2.06e-02	1.75e-02	1.87e-02	3.91e+00	5.04e+00	1.07e+01	5.45e-03	1.25e-02	6.30e-01
chr19	43689672	43733697	ENSMUSG00000025192	0.4596	+	Entpd7	protein_coding	1.18e-06	3.83e-04	3.339355	6.57e+00	9.47e-03	8.39e+00	9.68e-02	6.82e+00	6.58e+00	6.30e+00	1.12e-02	9.47e-03	7.78e-03	6.94e+00	6.83e+00	1.14e+01	1.22e-02	1.13e-02	2.67e-01
chr2	131846395	131847688	ENSMUSG00000083469	0.4660	+	Gm14281	processed_pseudogene	1.18e-06	3.83e-04	4.969626	0.00e+00	0.00e+00	2.17e+00	2.42e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.52e+00	0.00e+00	0.00e+00	7.26e-02	0.00e+00
chr2	30889471	30929863	ENSMUSG00000050737	0.4993	-	Ptges	protein_coding	1.71e-06	5.44e-04	3.124930	6.42e+00	2.08e-02	9.62e+00	1.83e-01	6.78e+00	6.86e+00	5.61e+00	2.50e-02	2.64e-02	1.10e-02	9.86e+00	9.73e+00	9.28e+00	2.12e-01	1.94e-01	1.43e-01
chr3	34183307	34184192	ENSMUSG00000105739	0.4458	+	Gm5708	processed_pseudogene	1.81e-06	5.66e-04	5.101538	0.00e+00	0.00e+00	2.22e+00	2.66e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.66e+00	0.00e+00	0.00e+00	7.97e-02	0.00e+00
chrX	77717052	77717983	ENSMUSG00000081358	0.4324	-	Gm14746	processed_pseudogene	1.90e-06	5.77e-04	5.369234	0.00e+00	0.00e+00	2.31e+00	3.22e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.93e+00	0.00e+00	0.00e+00	9.65e-02	0.00e+00
chr15	102459028	102462806	ENSMUSG00000023048	0.4951	+	Prr13	protein_coding	1.91e-06	5.77e-04	3.201773	9.22e+00	1.94e-01	1.12e+01	1.79e+00	9.39e+00	9.29e+00	8.99e+00	2.17e-01	2.02e-01	1.63e-01	1.00e+01	9.70e+00	1.38e+01	3.38e-01	2.68e-01	4.76e+00
chr2	126034658	126091185	ENSMUSG00000027208	0.4000	+	Fgf7	protein_coding	1.96e-06	5.84e-04	3.705978	3.69e+00	2.98e-03	7.38e+00	4.19e-02	4.00e+00	3.91e+00	3.17e+00	3.63e-03	3.39e-03	1.94e-03	7.21e+00	6.99e+00	7.95e+00	3.56e-02	3.05e-02	5.95e-02
chr8	109575128	109579172	ENSMUSG00000031722	0.5125	-	Hp	protein_coding	2.04e-06	5.99e-04	3.960829	2.19e+00	2.11e-03	6.75e+00	3.80e-02	0.00e+00	3.58e+00	3.00e+00	0.00e+00	3.87e-03	2.46e-03	6.93e+00	6.38e+00	6.93e+00	4.26e-02	2.88e-02	4.26e-02
chr4	134082448	134095082	ENSMUSG00000000682	0.4953	-	Cd52	protein_coding	2.32e-06	6.68e-04	5.643856	0.00e+00	0.00e+00	3.90e+00	1.24e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.93e+00	0.00e+00	4.75e+00	3.06e-02	0.00e+00	6.58e-03
chr8	122424776	122432930	ENSMUSG00000006519	0.5318	-	Cyba	protein_coding	2.66e-06	7.55e-04	3.170728	8.05e+00	1.02e-01	9.22e+00	9.17e-01	8.01e+00	8.12e+00	8.03e+00	9.85e-02	1.06e-01	1.00e-01	7.36e+00	7.57e+00	1.27e+01	6.25e-02	7.24e-02	2.62e+00
chr1	72857932	72874884	ENSMUSG00000026185	0.4955	-	Igfbp5	protein_coding	2.75e-06	7.68e-04	4.080920	1.58e+00	5.85e-04	6.19e+00	1.27e-02	3.17e+00	0.00e+00	1.58e+00	1.40e-03	0.00e+00	3.51e-04	6.07e+00	6.30e+00	6.21e+00	1.16e-02	1.37e-02	1.28e-02
chr14	46383520	46390669	ENSMUSG00000021835	0.5305	-	Bmp4	protein_coding	2.81e-06	7.72e-04	-2.996158	8.53e+00	1.31e-01	5.36e+00	1.62e-02	8.67e+00	8.73e+00	8.19e+00	1.43e-01	1.49e-01	1.02e-01	4.32e+00	5.55e+00	6.21e+00	6.67e-03	1.62e-02	2.56e-02
chr16	15887286	15891031	ENSMUSG00000071637	0.5160	+	Cebpd	protein_coding	3.26e-06	8.84e-04	2.997188	6.66e+00	2.72e-02	9.72e+00	2.19e-01	7.16e+00	6.86e+00	5.95e+00	3.64e-02	2.95e-02	1.56e-02	1.00e+01	9.66e+00	9.46e+00	2.69e-01	2.07e-01	1.80e-01
chr8	21162277	21163249	ENSMUSG00000074443	0.4378	+	Defa22	protein_coding	3.83e-06	1.02e-03	5.554589	0.00e+00	0.00e+00	3.97e+00	3.41e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	5.25e+00	0.00e+00	6.67e+00	2.74e-02	0.00e+00	7.49e-02
chr8	26977325	26981461	ENSMUSG00000085795	0.6084	+	Zfp703	protein_coding	4.36e-06	1.15e-03	3.051179	4.88e+00	5.58e-03	7.23e+00	4.77e-02	5.13e+00	5.00e+00	4.52e+00	6.54e-03	5.97e-03	4.23e-03	9.20e+00	6.63e+00	5.86e+00	1.13e-01	1.89e-02	1.10e-02
chr3	55242364	55539068	ENSMUSG00000027797	0.4253	+	Dclk1	protein_coding	4.57e-06	1.19e-03	3.178228	4.68e+00	1.20e-03	7.77e+00	1.12e-02	4.70e+00	4.81e+00	4.52e+00	1.22e-03	1.31e-03	1.07e-03	8.19e+00	8.10e+00	7.02e+00	1.41e-02	1.33e-02	6.27e-03
chr5	90903871	90905938	ENSMUSG00000058427	0.4507	+	Cxcl2	protein_coding	4.72e-06	1.21e-03	3.034325	6.31e+00	2.84e-02	9.36e+00	2.35e-01	6.34e+00	6.69e+00	5.91e+00	2.83e-02	3.60e-02	2.08e-02	9.62e+00	9.47e+00	8.98e+00	2.77e-01	2.50e-01	1.78e-01
chr9	18292125	18317442	ENSMUSG00000001774	0.3771	+	Chordc1	protein_coding	5.38e-06	1.36e-03	3.046836	8.32e+00	2.22e-02	9.97e+00	1.84e-01	8.48e+00	8.08e+00	8.41e+00	2.46e-02	1.87e-02	2.34e-02	8.55e+00	8.54e+00	1.28e+01	2.58e-02	2.57e-02	5.01e-01
chr5	52533517	52566462	ENSMUSG00000039252	0.4713	-	Lgi2	protein_coding	6.20e-06	1.54e-03	3.058378	5.15e+00	6.37e-03	8.25e+00	5.44e-02	5.04e+00	5.75e+00	4.64e+00	5.61e-03	9.30e-03	4.21e-03	7.85e+00	8.51e+00	8.41e+00	4.02e-02	6.37e-02	5.93e-02
chr8	21025545	21026516	ENSMUSG00000074447	0.4414	+	Defa21	protein_coding	6.43e-06	1.58e-03	5.459432	0.00e+00	0.00e+00	3.98e+00	3.19e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	5.55e+00	0.00e+00	6.39e+00	3.41e-02	0.00e+00	6.16e-02
chr9	36779159	36797393	ENSMUSG00000062762	0.4195	-	Ei24	protein_coding	6.56e-06	1.59e-03	3.028828	8.73e+00	5.84e-02	9.90e+00	4.78e-01	8.91e+00	8.71e+00	8.58e+00	6.58e-02	5.73e-02	5.22e-02	8.46e+00	7.97e+00	1.33e+01	4.81e-02	3.43e-02	1.35e+00
chr2	43555329	43682715	ENSMUSG00000026866	0.3772	+	Kynu	protein_coding	6.64e-06	1.59e-03	5.044394	0.00e+00	0.00e+00	2.20e+00	3.36e-03	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.60e+00	0.00e+00	0.00e+00	1.01e-02	0.00e+00
chr5	7960457	7982213	ENSMUSG00000012428	0.4035	+	Steap4	protein_coding	7.50e-06	1.77e-03	3.980548	3.04e+00	2.86e-03	7.05e+00	5.03e-02	3.32e+00	3.81e+00	2.00e+00	3.09e-03	4.47e-03	1.03e-03	7.09e+00	7.86e+00	6.19e+00	4.64e-02	7.98e-02	2.48e-02
chr8	94172664	94173568	ENSMUSG00000031762	0.5569	+	Mt2	protein_coding	7.74e-06	1.80e-03	2.733856	8.25e+00	2.27e-01	1.10e+01	1.51e+00	7.77e+00	8.19e+00	8.78e+00	1.56e-01	2.09e-01	3.15e-01	1.16e+01	1.10e+01	1.03e+01	2.16e+00	1.48e+00	8.99e-01
chr7	38261996	38271423	ENSMUSG00000030423	0.4752	-	Pop4	protein_coding	8.06e-06	1.85e-03	3.032128	6.98e+00	1.29e-02	8.06e+00	1.06e-01	7.18e+00	6.66e+00	7.10e+00	1.46e-02	1.02e-02	1.38e-02	6.04e+00	6.60e+00	1.15e+01	6.61e-03	9.76e-03	3.02e-01
chr12	104236245	104241939	ENSMUSG00000041481	0.4834	+	Serpina3g	protein_coding	8.64e-06	1.96e-03	3.245112	4.73e+00	5.86e-03	7.99e+00	5.74e-02	4.70e+00	5.09e+00	4.39e+00	5.63e-03	7.43e-03	4.51e-03	8.06e+00	8.20e+00	7.70e+00	5.97e-02	6.60e-02	4.66e-02
chr10	88322804	88379080	ENSMUSG00000020057	0.4456	-	Dram1	protein_coding	8.90e-06	2.00e-03	3.118142	5.03e+00	3.36e-03	8.19e+00	3.00e-02	5.32e+00	5.46e+00	4.32e+00	3.89e-03	4.29e-03	1.90e-03	7.99e+00	8.69e+00	7.88e+00	2.53e-02	4.11e-02	2.35e-02
chr9	108403611	108428484	ENSMUSG00000047220	0.4314	-	Ccdc36	protein_coding	1.02e-05	2.25e-03	2.866578	5.62e+00	2.04e-02	8.51e+00	1.51e-01	5.25e+00	5.64e+00	5.95e+00	1.54e-02	2.04e-02	2.54e-02	8.52e+00	8.60e+00	8.40e+00	1.53e-01	1.61e-01	1.40e-01
chr11	100140810	100148665	ENSMUSG00000020911	0.5148	-	Krt19	protein_coding	1.14e-05	2.50e-03	4.470320	8.62e-01	3.83e-04	3.42e+00	1.66e-02	1.00e+00	0.00e+00	1.58e+00	3.83e-04	0.00e+00	7.66e-04	0.00e+00	6.93e+00	3.32e+00	0.00e+00	4.63e-02	3.45e-03
chr9	119335934	119341411	ENSMUSG00000032508	0.5215	-	Myd88	protein_coding	1.17e-05	2.52e-03	3.285402	3.87e+00	3.04e-03	7.08e+00	3.16e-02	4.00e+00	3.91e+00	3.70e+00	3.34e-03	3.12e-03	2.67e-03	6.39e+00	7.39e+00	7.47e+00	1.85e-02	3.72e-02	3.92e-02
chr7	19678083	19681479	ENSMUSG00000074336	0.5057	-	Apoc4	protein_coding	1.31e-05	2.80e-03	-5.832890	3.46e+00	2.18e-02	0.00e+00	0.00e+00	2.00e+00	7.37e+00	1.00e+00	1.17e-03	6.38e-02	3.89e-04	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	39005845	39165114	ENSMUSG00000039530	0.3920	+	Tusc3	protein_coding	1.39e-05	2.93e-03	2.903681	8.02e+00	2.69e-02	9.55e+00	2.02e-01	8.03e+00	7.95e+00	8.08e+00	2.70e-02	2.56e-02	2.80e-02	8.36e+00	7.93e+00	1.24e+01	3.39e-02	2.52e-02	5.46e-01
chr2	132052496	132145108	ENSMUSG00000027340	0.4544	-	Slc23a2	protein_coding	1.63e-05	3.38e-03	2.996178	5.95e+00	5.30e-03	8.05e+00	4.29e-02	5.75e+00	5.75e+00	6.34e+00	4.53e-03	4.53e-03	6.84e-03	6.27e+00	7.61e+00	1.03e+01	6.50e-03	1.67e-02	1.05e-01
chr6	78466269	78468872	ENSMUSG00000030017	0.4213	-	Reg3g	protein_coding	1.64e-05	3.38e-03	4.906891	0.00e+00	0.00e+00	3.46e+00	1.97e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.13e+00	0.00e+00	4.25e+00	4.69e-02	0.00e+00	1.22e-02
chr6	127411130	127411733	ENSMUSG00000106883	0.4702	+	Gm43632	processed_pseudogene	1.71e-05	3.50e-03	4.475733	3.33e-01	2.66e-04	3.43e+00	2.29e-02	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	1.00e+00	6.30e+00	3.00e+00	7.97e-04	6.22e-02	5.58e-03
chr15	58941244	59082026	ENSMUSG00000022353	0.4852	-	Mtss1	protein_coding	1.95e-05	3.93e-03	-2.675765	9.35e+00	1.94e-01	6.61e+00	3.00e-02	8.93e+00	9.55e+00	9.57e+00	1.42e-01	2.18e-01	2.21e-01	5.91e+00	6.77e+00	7.17e+00	1.72e-02	3.14e-02	4.16e-02
chr4	139347435	139352576	ENSMUSG00000028741	0.5301	-	Mrto4	protein_coding	2.16e-05	4.29e-03	2.873409	7.17e+00	2.70e-02	8.36e+00	1.99e-01	7.28e+00	7.12e+00	7.12e+00	2.91e-02	2.60e-02	2.60e-02	6.78e+00	6.77e+00	1.15e+01	2.06e-02	2.04e-02	5.57e-01
chr17	13007839	13018119	ENSMUSG00000006818	0.4286	+	Sod2	protein_coding	2.17e-05	4.29e-03	2.706413	8.55e+00	8.95e-02	1.12e+01	5.85e-01	8.63e+00	8.65e+00	8.37e+00	9.42e-02	9.57e-02	7.85e-02	1.11e+01	1.10e+01	1.16e+01	5.26e-01	4.99e-01	7.31e-01
chr13	41182495	41220405	ENSMUSG00000021364	0.4502	-	Elovl2	protein_coding	2.21e-05	4.32e-03	4.247928	6.67e-01	2.47e-04	2.27e+00	9.13e-03	0.00e+00	2.00e+00	0.00e+00	0.00e+00	7.40e-04	0.00e+00	0.00e+00	6.81e+00	0.00e+00	0.00e+00	2.74e-02	0.00e+00
chr1	6916559	6923588	ENSMUSG00000102135	0.4255	+	Gm37108	processed_pseudogene	2.38e-05	4.56e-03	-2.967169	7.02e+00	1.03e-01	3.93e+00	1.25e-02	7.19e+00	6.93e+00	6.94e+00	1.16e-01	9.65e-02	9.73e-02	3.46e+00	4.75e+00	3.58e+00	7.97e-03	2.07e-02	8.77e-03
chr19	16435667	16610818	ENSMUSG00000024697	0.4360	+	Gna14	protein_coding	2.38e-05	4.56e-03	-3.413076	6.35e+00	3.17e-02	1.94e+00	2.62e-03	6.21e+00	6.51e+00	6.32e+00	2.87e-02	3.54e-02	3.11e-02	0.00e+00	1.58e+00	4.25e+00	0.00e+00	7.87e-04	7.08e-03
chr2	144142488	144143373	ENSMUSG00000082480	0.5756	-	Gm11687	processed_pseudogene	2.51e-05	4.71e-03	3.288978	3.27e+00	7.44e-03	4.66e+00	7.97e-02	3.91e+00	3.32e+00	2.58e+00	1.12e-02	7.18e-03	3.99e-03	3.00e+00	8.17e+00	2.81e+00	5.58e-03	2.29e-01	4.78e-03
chr11	82045712	82047525	ENSMUSG00000035373	0.4311	+	Ccl7	protein_coding	2.51e-05	4.71e-03	2.680495	9.02e+00	3.11e-01	1.17e+01	2.00e+00	9.17e+00	9.21e+00	8.69e+00	3.40e-01	3.51e-01	2.43e-01	1.16e+01	1.18e+01	1.17e+01	1.89e+00	2.08e+00	2.02e+00
chr4	59090187	59090929	ENSMUSG00000081432	0.4845	+	Gm12593	processed_pseudogene	2.56e-05	4.75e-03	4.544321	0.00e+00	0.00e+00	2.77e+00	1.78e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	2.32e+00	6.00e+00	0.00e+00	3.19e-03	5.02e-02	0.00e+00
chr2	32308471	32353338	ENSMUSG00000026825	0.5353	-	Dnm1	protein_coding	2.64e-05	4.85e-03	3.378512	5.28e-01	7.20e-05	3.25e+00	1.76e-03	0.00e+00	1.58e+00	0.00e+00	0.00e+00	2.16e-04	0.00e+00	2.00e+00	2.32e+00	5.43e+00	3.24e-04	4.32e-04	4.53e-03
chr5	21543559	21575904	ENSMUSG00000039883	0.4349	+	Lrrc17	protein_coding	2.79e-05	5.07e-03	2.769640	1.17e+01	1.09e+00	1.43e+01	7.43e+00	1.20e+01	1.14e+01	1.17e+01	1.33e+00	8.58e-01	1.08e+00	1.42e+01	1.36e+01	1.52e+01	6.26e+00	4.10e+00	1.19e+01
chr12	83987861	83993873	ENSMUSG00000021226	0.4953	+	Acot2	protein_coding	2.89e-05	5.20e-03	-2.857981	7.27e+00	7.51e-02	4.30e+00	9.93e-03	7.41e+00	7.32e+00	7.07e+00	8.26e-02	7.77e-02	6.50e-02	3.81e+00	4.00e+00	5.09e+00	6.35e-03	7.33e-03	1.61e-02
chr5	44472132	44799680	ENSMUSG00000039706	0.4135	-	Ldb2	protein_coding	3.35e-05	5.97e-03	-3.119739	6.82e+00	1.51e-02	3.57e+00	1.61e-03	6.71e+00	6.83e+00	6.91e+00	1.40e-02	1.52e-02	1.60e-02	3.32e+00	4.39e+00	3.00e+00	1.21e-03	2.69e-03	9.42e-04

Download the DEG result list for MI_vs_CI.
Download the whole result list for MI_vs_CI.

DEG table for the contrast ML_vs_MI

The following table presents the top 10% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast ML_vs_MI. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right.

chromosome	start	end	gene_id	gc_content	strand	gene_name	biotype	p-value_deseq	FDR_deseq	log2_normalized_fold_change_ML_vs_MI	log2_normalized_mean_counts_ML	rpgm_normalized_mean_counts_ML	log2_normalized_mean_counts_MI	rpgm_normalized_mean_counts_MI	log2_normalized_counts_GK3R167-ML1	log2_normalized_counts_GK3R168-ML2	log2_normalized_counts_GK3R169-ML3	rpgm_normalized_counts_GK3R167-ML1	rpgm_normalized_counts_GK3R168-ML2	rpgm_normalized_counts_GK3R169-ML3	log2_normalized_counts_GK3R143_MI1	log2_normalized_counts_GK3R144_MI2	log2_normalized_counts_GK3R145_MI3	rpgm_normalized_counts_GK3R143_MI1	rpgm_normalized_counts_GK3R144_MI2	rpgm_normalized_counts_GK3R145_MI3
chr10	81182605	81183849	ENSMUSG00000053603	0.5293	-	4930442H23Rik	protein_coding	9.13e-43	1.66e-38	-1.40e+01	1.40e+01	1.32e+01	0.00e+00	0.00e+00	1.41e+01	1.41e+01	1.39e+01	1.37e+01	1.36e+01	1.23e+01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	37714190	37724490	ENSMUSG00000058174	0.4589	-	Gm5148	protein_coding	1.62e-39	1.47e-35	-1.31e+01	1.30e+01	2.98e+00	0.00e+00	0.00e+00	1.26e+01	1.29e+01	1.36e+01	2.13e+00	2.68e+00	4.12e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	29376671	29388468	ENSMUSG00000058831	0.4835	-	Opn1sw	protein_coding	1.41e-37	8.56e-34	-1.23e+01	1.33e+01	1.95e+00	6.67e-01	1.99e-04	1.33e+01	1.30e+01	1.35e+01	1.95e+00	1.67e+00	2.23e+00	0.00e+00	0.00e+00	2.00e+00	0.00e+00	0.00e+00	5.96e-04
chr10	60302748	60696490	ENSMUSG00000012819	0.5079	-	Cdh23	protein_coding	3.38e-35	1.53e-31	-1.13e+01	1.22e+01	5.92e-01	6.67e-01	1.21e-04	1.23e+01	1.27e+01	1.16e+01	5.92e-01	7.99e-01	3.85e-01	2.00e+00	0.00e+00	0.00e+00	3.64e-04	0.00e+00	0.00e+00
chr19	9985174	10001633	ENSMUSG00000037418	0.4892	-	Best1	protein_coding	1.04e-34	3.79e-31	-1.11e+01	1.21e+01	1.65e+00	8.62e-01	3.68e-04	1.24e+01	1.21e+01	1.19e+01	1.95e+00	1.57e+00	1.42e+00	0.00e+00	1.58e+00	1.00e+00	0.00e+00	7.35e-04	3.68e-04
chr6	72953236	72957247	ENSMUSG00000097569	0.4743	+	Gm26640	lincRNA	7.87e-34	2.10e-30	-1.12e+01	1.12e+01	1.94e+00	0.00e+00	0.00e+00	1.13e+01	1.10e+01	1.14e+01	2.01e+00	1.67e+00	2.13e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	127982570	127984881	ENSMUSG00000097751	0.4010	-	Gm26690	lincRNA	8.09e-34	2.10e-30	-1.14e+01	1.12e+01	2.12e+00	0.00e+00	0.00e+00	1.06e+01	1.10e+01	1.21e+01	1.27e+00	1.59e+00	3.49e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	39847113	39848035	ENSMUSG00000105361	0.5439	-	AY036118	lincRNA	1.90e-33	4.31e-30	-1.12e+01	1.10e+01	1.86e+00	0.00e+00	0.00e+00	1.00e+01	1.16e+01	1.15e+01	8.34e-01	2.48e+00	2.25e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	28881422	28893563	ENSMUSG00000054083	0.5460	+	Capn12	protein_coding	1.87e-32	3.77e-29	-1.07e+01	1.12e+01	7.43e-01	3.33e-01	1.08e-04	1.13e+01	1.11e+01	1.11e+01	7.95e-01	7.14e-01	7.20e-01	1.00e+00	0.00e+00	0.00e+00	3.24e-04	0.00e+00	0.00e+00
chr8	13172022	13200620	ENSMUSG00000038515	0.5033	-	Grtp1	protein_coding	4.28e-32	7.78e-29	-1.03e+01	1.20e+01	5.28e-01	1.67e+00	2.97e-04	1.24e+01	1.18e+01	1.18e+01	6.84e-01	4.41e-01	4.58e-01	1.00e+00	2.00e+00	2.00e+00	1.27e-04	3.82e-04	3.82e-04
chr11	50174444	50200115	ENSMUSG00000020381	0.4711	+	3010026O09Rik	protein_coding	1.22e-31	2.02e-28	-1.02e+01	1.18e+01	5.82e-01	1.30e+00	3.32e-04	1.20e+01	1.17e+01	1.16e+01	6.71e-01	5.50e-01	5.25e-01	2.32e+00	1.58e+00	0.00e+00	6.65e-04	3.32e-04	0.00e+00
chr12	17284721	17329359	ENSMUSG00000020566	0.4798	-	Atp6v1c2	protein_coding	3.50e-31	5.30e-28	-1.06e+01	1.06e+01	1.47e-01	0.00e+00	0.00e+00	1.09e+01	1.02e+01	1.06e+01	1.81e-01	1.14e-01	1.48e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	71624417	71671757	ENSMUSG00000034799	0.5418	-	Unc13a	protein_coding	2.22e-30	3.10e-27	-1.00e+01	1.10e+01	1.25e-01	8.62e-01	5.94e-05	1.13e+01	1.09e+01	1.09e+01	1.48e-01	1.12e-01	1.15e-01	1.58e+00	1.00e+00	0.00e+00	1.19e-04	5.94e-05	0.00e+00
chr9	58652850	58743964	ENSMUSG00000074269	0.4395	-	Rec114	protein_coding	2.22e-29	2.88e-26	-1.00e+01	1.04e+01	5.37e-01	3.33e-01	1.28e-04	1.05e+01	1.02e+01	1.06e+01	5.55e-01	4.66e-01	5.90e-01	1.00e+00	0.00e+00	0.00e+00	3.85e-04	0.00e+00	0.00e+00
chr10	70868669	70934324	ENSMUSG00000047692	0.4390	+	4930533K18Rik	protein_coding	3.23e-29	3.91e-26	-1.01e+01	1.01e+01	2.71e-01	0.00e+00	0.00e+00	9.83e+00	1.03e+01	1.01e+01	2.27e-01	3.18e-01	2.68e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	140898945	140900446	ENSMUSG00000025488	0.5360	-	Cox8b	protein_coding	3.58e-29	4.07e-26	-1.01e+01	1.01e+01	8.48e-01	0.00e+00	0.00e+00	1.03e+01	9.85e+00	1.01e+01	1.00e+00	7.12e-01	8.33e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	121439059	121456781	ENSMUSG00000046110	0.4888	-	Serinc4	protein_coding	1.28e-28	1.37e-25	-9.60e+00	1.06e+01	7.98e-02	8.62e-01	5.16e-05	1.06e+01	1.08e+01	1.04e+01	7.79e-02	9.02e-02	7.12e-02	1.00e+00	1.58e+00	0.00e+00	5.16e-05	1.03e-04	0.00e+00
chr1	9908638	9942085	ENSMUSG00000046101	0.3985	+	Mcmdc2	protein_coding	4.54e-28	4.58e-25	-9.83e+00	9.80e+00	1.27e-01	0.00e+00	0.00e+00	9.40e+00	9.90e+00	1.01e+01	9.43e-02	1.33e-01	1.54e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	66065176	66069719	ENSMUSG00000039452	0.5427	-	Snx22	protein_coding	1.36e-27	1.30e-24	-9.69e+00	9.68e+00	1.86e-01	0.00e+00	0.00e+00	9.52e+00	9.89e+00	9.63e+00	1.65e-01	2.13e-01	1.79e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	35062693	35066184	ENSMUSG00000073414	0.5284	-	G6b	protein_coding	7.62e-27	6.92e-24	-9.54e+00	9.52e+00	2.56e-01	0.00e+00	0.00e+00	9.59e+00	9.23e+00	9.75e+00	2.66e-01	2.06e-01	2.97e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	75450436	75474343	ENSMUSG00000033007	0.5347	+	Asic4	protein_coding	1.19e-26	1.03e-23	-9.52e+00	9.52e+00	3.73e-01	0.00e+00	0.00e+00	9.45e+00	9.51e+00	9.60e+00	3.54e-01	3.70e-01	3.95e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	143069153	143094642	ENSMUSG00000009246	0.5298	-	Trpm5	protein_coding	3.33e-26	2.75e-23	-9.36e+00	9.36e+00	5.62e-02	0.00e+00	0.00e+00	9.37e+00	9.20e+00	9.50e+00	5.64e-02	5.02e-02	6.18e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	25218745	25222280	ENSMUSG00000026969	0.4938	+	Fam166a	protein_coding	3.62e-26	2.86e-23	-9.53e+00	9.41e+00	5.41e-01	0.00e+00	0.00e+00	8.92e+00	9.13e+00	1.02e+01	3.54e-01	4.12e-01	8.57e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	113842601	113843116	ENSMUSG00000090458	0.5271	+	Gm17122	antisense	8.13e-26	6.15e-23	-9.28e+00	9.26e+00	4.96e-01	0.00e+00	0.00e+00	8.89e+00	9.34e+00	9.54e+00	3.78e-01	5.15e-01	5.94e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	90104132	90212048	ENSMUSG00000027939	0.4384	+	Nup210l	protein_coding	1.02e-25	7.45e-23	-9.24e+00	9.23e+00	4.69e-01	0.00e+00	0.00e+00	9.19e+00	9.39e+00	9.12e+00	4.54e-01	5.20e-01	4.33e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	100621342	100636865	ENSMUSG00000053559	0.4926	-	Smagp	protein_coding	1.29e-25	9.02e-23	-9.24e+00	9.24e+00	3.43e-01	0.00e+00	0.00e+00	9.37e+00	9.17e+00	9.16e+00	3.76e-01	3.27e-01	3.26e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	101279012	101296317	ENSMUSG00000078653	0.4580	+	Cntd1	protein_coding	1.58e-25	1.04e-22	-9.27e+00	9.27e+00	1.26e-01	0.00e+00	0.00e+00	9.24e+00	9.17e+00	9.39e+00	1.24e-01	1.18e-01	1.37e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	16455721	16477728	ENSMUSG00000001988	0.5276	-	Npas1	protein_coding	1.60e-25	1.04e-22	-9.29e+00	9.27e+00	2.38e-01	0.00e+00	0.00e+00	9.39e+00	8.94e+00	9.49e+00	2.55e-01	1.86e-01	2.74e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	3567990	3584939	ENSMUSG00000065952	0.4553	+	C330021F23Rik	protein_coding	2.10e-25	1.32e-22	-9.16e+00	9.15e+00	1.29e-01	0.00e+00	0.00e+00	8.88e+00	9.23e+00	9.34e+00	1.06e-01	1.35e-01	1.46e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69851005	69858730	ENSMUSG00000001583	0.5286	-	Tnk1	protein_coding	2.79e-25	1.64e-22	-9.16e+00	9.14e+00	9.64e-02	0.00e+00	0.00e+00	9.17e+00	9.40e+00	8.86e+00	9.69e-02	1.14e-01	7.85e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	29170210	29173976	ENSMUSG00000031493	0.6010	+	Ggn	protein_coding	2.80e-25	1.64e-22	-8.28e+00	1.13e+01	9.39e-01	2.95e+00	2.64e-03	1.14e+01	1.10e+01	1.14e+01	1.04e+00	7.80e-01	9.99e-01	2.58e+00	2.81e+00	3.46e+00	1.89e-03	2.26e-03	3.77e-03
chr1	74278550	74279624	ENSMUSG00000064272	0.6130	+	Gpbar1	protein_coding	3.20e-25	1.82e-22	-8.52e+00	1.07e+01	1.66e+00	2.06e+00	3.55e-03	1.09e+01	1.06e+01	1.08e+01	1.79e+00	1.49e+00	1.70e+00	3.00e+00	1.58e+00	1.58e+00	6.77e-03	1.93e-03	1.93e-03
chr7	139579376	139582797	ENSMUSG00000041309	0.5786	-	Nkx6-2	protein_coding	4.57e-25	2.52e-22	-9.11e+00	9.10e+00	1.79e-01	0.00e+00	0.00e+00	9.34e+00	8.89e+00	9.06e+00	2.10e-01	1.55e-01	1.73e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	107558809	107568415	ENSMUSG00000097099	0.4994	-	Gm9917	antisense	6.00e-25	3.21e-22	-9.18e+00	9.13e+00	1.15e-01	0.00e+00	0.00e+00	9.06e+00	8.72e+00	9.60e+00	1.06e-01	8.41e-02	1.55e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	120955351	121277197	ENSMUSG00000040936	0.4889	-	Ulk4	protein_coding	7.43e-25	3.86e-22	-8.27e+00	1.15e+01	6.60e-02	3.15e+00	1.92e-04	1.14e+01	1.15e+01	1.17e+01	6.07e-02	6.36e-02	7.37e-02	3.32e+00	3.81e+00	2.32e+00	1.99e-04	2.87e-04	8.84e-05
chr18	36735068	36742391	ENSMUSG00000006850	0.4870	+	Tmco6	protein_coding	1.31e-24	6.61e-22	-8.41e+00	1.03e+01	8.43e-01	1.53e+00	1.80e-03	1.02e+01	1.01e+01	1.05e+01	8.15e-01	7.31e-01	9.84e-01	0.00e+00	2.00e+00	2.58e+00	0.00e+00	2.02e-03	3.37e-03
chr3	95897768	95904691	ENSMUSG00000038526	0.5042	-	Car14	protein_coding	1.74e-24	8.53e-22	-9.06e+00	9.04e+00	9.88e-02	0.00e+00	0.00e+00	8.86e+00	8.88e+00	9.38e+00	8.58e-02	8.73e-02	1.23e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	115909455	116076176	ENSMUSG00000056880	0.4482	+	Gadl1	protein_coding	2.13e-24	1.02e-21	-8.10e+00	1.10e+01	4.40e-01	2.86e+00	1.39e-03	1.13e+01	1.08e+01	1.10e+01	5.35e-01	3.64e-01	4.21e-01	2.81e+00	2.32e+00	3.46e+00	1.25e-03	8.36e-04	2.09e-03
chr2	156872457	156887192	ENSMUSG00000027636	0.5173	-	Sla2	protein_coding	2.73e-24	1.26e-21	-8.79e+00	9.21e+00	1.84e-01	3.33e-01	1.04e-04	9.23e+00	9.13e+00	9.26e+00	1.87e-01	1.74e-01	1.90e-01	1.00e+00	0.00e+00	0.00e+00	3.11e-04	0.00e+00	0.00e+00
chr12	76324891	76334153	ENSMUSG00000021057	0.4478	+	Akap5	protein_coding	2.77e-24	1.26e-21	-7.92e+00	1.19e+01	7.39e-01	3.92e+00	2.86e-03	1.24e+01	1.17e+01	1.16e+01	1.01e+00	6.17e-01	5.93e-01	3.81e+00	3.32e+00	4.64e+00	2.43e-03	1.68e-03	4.48e-03
chr14	66135039	66152948	ENSMUSG00000022041	0.4905	+	Chrna2	protein_coding	3.11e-24	1.38e-21	-8.99e+00	8.93e+00	1.63e-01	0.00e+00	0.00e+00	9.32e+00	8.34e+00	9.14e+00	2.04e-01	1.03e-01	1.80e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	92853653	92856334	ENSMUSG00000109669	0.5272	-	Gm45472	antisense	3.98e-24	1.72e-21	-8.99e+00	8.93e+00	4.06e-01	0.00e+00	0.00e+00	8.48e+00	9.50e+00	8.81e+00	2.84e-01	5.75e-01	3.58e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	79970715	79977190	ENSMUSG00000035745	0.5865	+	Grin3b	protein_coding	5.55e-24	2.34e-21	-9.07e+00	9.04e+00	2.06e-01	0.00e+00	0.00e+00	8.73e+00	9.02e+00	9.38e+00	1.63e-01	1.99e-01	2.55e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	33638056	33645706	ENSMUSG00000032739	0.4912	+	Pram1	protein_coding	5.98e-24	2.46e-21	-8.97e+00	8.97e+00	4.43e-02	0.00e+00	0.00e+00	9.03e+00	8.78e+00	9.08e+00	4.63e-02	3.89e-02	4.79e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	33630759	33645705	ENSMUSG00000092412	0.4843	+	Gm20507	processed_transcript	6.10e-24	2.46e-21	-8.97e+00	8.97e+00	4.00e-01	0.00e+00	0.00e+00	9.03e+00	8.78e+00	9.08e+00	4.17e-01	3.51e-01	4.31e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	29743048	30026033	ENSMUSG00000044072	0.4117	-	Eml6	protein_coding	9.37e-24	3.70e-21	-8.18e+00	1.03e+01	7.41e-02	1.67e+00	1.97e-04	1.04e+01	1.02e+01	1.03e+01	8.08e-02	6.98e-02	7.19e-02	3.00e+00	0.00e+00	2.00e+00	4.13e-04	0.00e+00	1.77e-04
chr11	102393403	102402555	ENSMUSG00000006575	0.5573	+	Rundc3a	protein_coding	9.88e-24	3.82e-21	-8.44e+00	9.44e+00	1.20e-01	8.62e-01	1.73e-04	9.42e+00	9.44e+00	9.47e+00	1.18e-01	1.19e-01	1.22e-01	1.00e+00	1.58e+00	0.00e+00	1.73e-04	3.45e-04	0.00e+00
chr1	172320501	172329318	ENSMUSG00000038026	0.5319	-	Kcnj9	protein_coding	1.08e-23	4.10e-21	-8.88e+00	8.87e+00	9.65e-02	0.00e+00	0.00e+00	9.05e+00	8.70e+00	8.87e+00	1.09e-01	8.50e-02	9.57e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	169969409	169972396	ENSMUSG00000097503	0.4060	+	3110045C21Rik	antisense	1.12e-23	4.17e-21	-8.75e+00	8.69e+00	3.35e-01	0.00e+00	0.00e+00	8.93e+00	9.04e+00	8.09e+00	3.81e-01	4.10e-01	2.12e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	32308471	32353338	ENSMUSG00000026825	0.5353	-	Dnm1	protein_coding	1.41e-23	5.14e-21	-8.52e+00	9.24e+00	6.58e-02	5.28e-01	7.20e-05	9.31e+00	8.95e+00	9.46e+00	6.83e-02	5.31e-02	7.61e-02	0.00e+00	1.58e+00	0.00e+00	0.00e+00	2.16e-04	0.00e+00
chr6	127122966	127126155	ENSMUSG00000107379	0.4564	+	Gm43126	antisense	1.58e-23	5.65e-21	-8.81e+00	8.80e+00	3.56e-01	0.00e+00	0.00e+00	8.61e+00	8.88e+00	8.91e+00	3.11e-01	3.76e-01	3.83e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	44410159	44418569	ENSMUSG00000043923	0.4642	-	Ccdc84	protein_coding	2.04e-23	7.13e-21	-7.94e+00	1.03e+01	2.34e-01	2.25e+00	7.61e-04	1.04e+01	1.03e+01	1.01e+01	2.63e-01	2.35e-01	2.05e-01	1.58e+00	2.58e+00	2.58e+00	3.80e-04	9.51e-04	9.51e-04
chr11	96766802	96768269	ENSMUSG00000085242	0.5293	+	Gm11537	antisense	2.71e-23	9.30e-21	-8.85e+00	8.84e+00	3.66e-01	0.00e+00	0.00e+00	8.64e+00	8.85e+00	9.03e+00	3.17e-01	3.66e-01	4.15e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr16	11178176	11192292	ENSMUSG00000096959	0.4570	+	4930509G22Rik	lincRNA	3.78e-23	1.27e-20	-8.73e+00	8.72e+00	3.39e-01	0.00e+00	0.00e+00	8.74e+00	8.97e+00	8.44e+00	3.40e-01	4.00e-01	2.76e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	84701457	84704715	ENSMUSG00000034041	0.5726	+	Lyl1	protein_coding	2.88e-22	9.51e-20	-8.53e+00	8.53e+00	2.22e-01	0.00e+00	0.00e+00	8.57e+00	8.62e+00	8.38e+00	2.29e-01	2.36e-01	2.00e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	29953621	29965711	ENSMUSG00000063623	0.4614	+	C230062I16Rik	processed_transcript	2.94e-22	9.55e-20	-7.50e+00	1.13e+01	6.94e-01	3.86e+00	3.58e-03	1.16e+01	1.10e+01	1.14e+01	8.28e-01	5.25e-01	7.30e-01	3.58e+00	4.00e+00	4.00e+00	2.88e-03	3.92e-03	3.92e-03
chr6	125362660	125380793	ENSMUSG00000038167	0.5280	-	Plekhg6	protein_coding	4.88e-22	1.56e-19	-8.32e+00	8.72e+00	2.93e-01	3.33e-01	2.30e-04	8.69e+00	8.99e+00	8.50e+00	2.83e-01	3.48e-01	2.48e-01	0.00e+00	1.00e+00	0.00e+00	0.00e+00	6.89e-04	0.00e+00
chr4	43446462	43454628	ENSMUSG00000028459	0.5155	-	Cd72	protein_coding	5.02e-22	1.57e-19	-8.58e+00	8.58e+00	5.03e-02	0.00e+00	0.00e+00	8.46e+00	8.58e+00	8.70e+00	4.63e-02	5.01e-02	5.44e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	80879720	80899441	ENSMUSG00000059406	0.5335	+	Tmprss9	protein_coding	6.27e-22	1.93e-19	-8.32e+00	8.29e+00	2.35e-01	0.00e+00	0.00e+00	8.72e+00	8.18e+00	7.95e+00	3.11e-01	2.13e-01	1.82e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	27153714	27158668	ENSMUSG00000078787	0.5269	+	Cyp2t4	protein_coding	8.51e-22	2.58e-19	-8.45e+00	8.44e+00	2.57e-01	0.00e+00	0.00e+00	8.60e+00	8.23e+00	8.49e+00	2.86e-01	2.21e-01	2.64e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	92859803	92902906	ENSMUSG00000034212	0.4993	-	Ankmy1	protein_coding	9.28e-22	2.76e-19	-8.16e+00	8.55e+00	9.39e-02	3.33e-01	8.25e-05	8.68e+00	8.76e+00	8.22e+00	1.01e-01	1.07e-01	7.35e-02	1.00e+00	0.00e+00	0.00e+00	2.47e-04	0.00e+00	0.00e+00
chr17	12923833	12940402	ENSMUSG00000062480	0.4584	-	Acat3	protein_coding	9.55e-22	2.80e-19	-7.58e+00	9.89e+00	4.45e-01	2.25e+00	1.86e-03	1.00e+01	9.65e+00	1.00e+01	4.79e-01	3.74e-01	4.83e-01	1.58e+00	2.58e+00	2.58e+00	9.32e-04	2.33e-03	2.33e-03
chr2	155611212	155634307	ENSMUSG00000074652	0.5475	+	Myh7b	protein_coding	1.19e-21	3.44e-19	-8.43e+00	8.40e+00	1.26e-01	0.00e+00	0.00e+00	8.56e+00	8.64e+00	8.00e+00	1.38e-01	1.46e-01	9.36e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	78176711	78181909	ENSMUSG00000019437	0.5266	+	Tlcd1	protein_coding	1.38e-21	3.90e-19	-7.50e+00	1.04e+01	3.89e-01	2.90e+00	1.87e-03	1.04e+01	1.04e+01	1.05e+01	3.87e-01	3.84e-01	3.96e-01	2.81e+00	3.32e+00	2.58e+00	1.69e-03	2.53e-03	1.41e-03
chr8	105518755	105523988	ENSMUSG00000031891	0.5481	+	Hsd11b2	protein_coding	1.43e-21	4.00e-19	-7.95e+00	8.92e+00	2.70e-01	6.67e-01	5.49e-04	9.26e+00	8.87e+00	8.64e+00	3.36e-01	2.56e-01	2.18e-01	0.00e+00	0.00e+00	2.00e+00	0.00e+00	0.00e+00	1.65e-03
chr7	101818313	101822726	ENSMUSG00000007946	0.5659	+	Phox2a	protein_coding	2.30e-21	6.34e-19	-8.43e+00	8.43e+00	1.12e-01	0.00e+00	0.00e+00	8.27e+00	8.39e+00	8.62e+00	9.94e-02	1.08e-01	1.27e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	106870242	106884566	ENSMUSG00000031910	0.5057	+	Has3	protein_coding	5.02e-21	1.36e-18	-8.40e+00	8.39e+00	4.90e-02	0.00e+00	0.00e+00	8.50e+00	8.11e+00	8.56e+00	5.23e-02	4.00e-02	5.45e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	101068983	101152370	ENSMUSG00000035275	0.4489	+	Raver2	protein_coding	5.57e-21	1.49e-18	-7.67e+00	9.25e+00	8.66e-02	1.58e+00	2.84e-04	9.13e+00	9.35e+00	9.28e+00	7.93e-02	9.27e-02	8.80e-02	1.58e+00	1.58e+00	1.58e+00	2.84e-04	2.84e-04	2.84e-04
chr6	115774538	115805557	ENSMUSG00000030319	0.5026	+	Cand2	protein_coding	6.89e-21	1.81e-18	-7.16e+00	1.13e+01	8.92e-01	4.04e+00	5.88e-03	1.14e+01	1.11e+01	1.15e+01	9.35e-01	7.27e-01	1.01e+00	4.86e+00	3.17e+00	4.09e+00	9.50e-03	2.71e-03	5.43e-03
chr3	88171556	88177785	ENSMUSG00000096935	0.4767	-	1700113A16Rik	antisense	7.07e-21	1.84e-18	-8.10e+00	8.50e+00	1.46e-01	3.33e-01	1.33e-04	8.17e+00	8.74e+00	8.58e+00	1.15e-01	1.70e-01	1.52e-01	1.00e+00	0.00e+00	0.00e+00	3.99e-04	0.00e+00	0.00e+00
chr2	38997476	39006168	ENSMUSG00000035295	0.5293	+	Wdr38	protein_coding	8.99e-21	2.30e-18	-8.11e+00	8.11e+00	5.21e-02	0.00e+00	0.00e+00	8.12e+00	7.99e+00	8.21e+00	5.25e-02	4.78e-02	5.59e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	109614517	109674386	ENSMUSG00000048827	0.4630	+	Pkd1l3	protein_coding	1.15e-20	2.91e-18	-8.17e+00	8.16e+00	4.59e-02	0.00e+00	0.00e+00	7.99e+00	8.41e+00	8.10e+00	4.04e-02	5.39e-02	4.35e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr16	5086291	5132481	ENSMUSG00000039457	0.5103	-	Ppl	protein_coding	1.23e-20	3.06e-18	-7.71e+00	8.85e+00	2.29e-01	7.74e-01	6.27e-04	8.34e+00	8.75e+00	9.47e+00	1.52e-01	2.02e-01	3.32e-01	0.00e+00	2.32e+00	0.00e+00	0.00e+00	1.88e-03	0.00e+00
chr11	97160990	97161675	ENSMUSG00000084936	0.3907	+	Gm11583	antisense	1.31e-20	3.21e-18	-8.26e+00	8.24e+00	2.44e-01	0.00e+00	0.00e+00	8.44e+00	7.94e+00	8.35e+00	2.76e-01	1.95e-01	2.60e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	78439668	78468634	ENSMUSG00000016942	0.5308	-	Tmprss6	protein_coding	1.42e-20	3.44e-18	-8.20e+00	8.19e+00	1.63e-01	0.00e+00	0.00e+00	8.40e+00	8.19e+00	7.99e+00	1.87e-01	1.62e-01	1.41e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	32777381	32784428	ENSMUSG00000038987	0.5155	-	Cfap157	protein_coding	2.93e-20	7.00e-18	-8.20e+00	8.19e+00	1.12e-01	0.00e+00	0.00e+00	8.33e+00	8.04e+00	8.21e+00	1.22e-01	9.98e-02	1.13e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	10993465	11303681	ENSMUSG00000048960	0.3910	+	Prex2	protein_coding	3.82e-20	8.97e-18	-7.45e+00	8.78e+00	2.50e-02	1.39e+00	8.97e-05	9.30e+00	8.95e+00	8.11e+00	3.38e-02	2.65e-02	1.48e-02	1.58e+00	1.58e+00	1.00e+00	1.08e-04	1.08e-04	5.38e-05
chr17	33810520	33822918	ENSMUSG00000042099	0.4973	+	Kank3	protein_coding	3.85e-20	8.97e-18	-7.15e+00	9.73e+00	4.23e-01	2.45e+00	2.48e-03	9.64e+00	9.82e+00	9.75e+00	3.95e-01	4.49e-01	4.26e-01	3.17e+00	2.58e+00	1.58e+00	3.97e-03	2.48e-03	9.93e-04
chr6	119236526	119352407	ENSMUSG00000041460	0.4873	+	Cacna2d4	protein_coding	8.22e-20	1.89e-17	-7.94e+00	8.24e+00	2.64e-02	3.33e-01	2.70e-05	9.01e+00	7.85e+00	7.86e+00	4.18e-02	1.85e-02	1.88e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	8.10e-05
chr9	45906497	45929726	ENSMUSG00000035382	0.4761	+	Pcsk7	protein_coding	8.62e-20	1.96e-17	-6.87e+00	1.25e+01	4.26e-01	5.65e+00	3.58e-03	1.29e+01	1.24e+01	1.24e+01	5.30e-01	3.75e-01	3.74e-01	5.39e+00	5.95e+00	5.61e+00	2.94e-03	4.37e-03	3.44e-03
chr2	155278243	155357430	ENSMUSG00000038383	0.4369	-	Pigu	protein_coding	1.13e-19	2.53e-17	-6.84e+00	1.08e+01	4.50e-01	3.99e+00	3.70e-03	1.08e+01	1.08e+01	1.09e+01	4.36e-01	4.47e-01	4.69e-01	3.70e+00	4.17e+00	4.09e+00	2.96e-03	4.19e-03	3.95e-03
chr6	83762644	83768326	ENSMUSG00000014747	0.5233	+	Ankrd53	protein_coding	1.20e-19	2.65e-17	-8.20e+00	8.19e+00	1.16e-01	0.00e+00	0.00e+00	8.33e+00	8.06e+00	8.19e+00	1.26e-01	1.05e-01	1.15e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	152962485	153008482	ENSMUSG00000074673	0.4816	+	Ttll9	protein_coding	1.52e-19	3.32e-17	-7.88e+00	8.27e+00	1.96e-02	3.33e-01	2.09e-05	8.22e+00	8.02e+00	8.58e+00	1.86e-02	1.62e-02	2.40e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	6.26e-05
chr7	119742856	119744110	ENSMUSG00000109404	0.4382	-	Gm19963	processed_pseudogene	1.78e-19	3.85e-17	-8.10e+00	8.10e+00	2.19e-01	0.00e+00	0.00e+00	8.17e+00	8.16e+00	7.97e+00	2.30e-01	2.27e-01	1.99e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	94674894	94696278	ENSMUSG00000031775	0.5041	-	Pllp	protein_coding	2.74e-19	5.85e-17	-7.78e+00	8.18e+00	1.16e-01	3.33e-01	1.32e-04	7.97e+00	8.47e+00	8.10e+00	9.91e-02	1.40e-01	1.08e-01	0.00e+00	1.00e+00	0.00e+00	0.00e+00	3.96e-04	0.00e+00
chr5	137518548	137527935	ENSMUSG00000029714	0.5839	+	Gigyf1	protein_coding	3.09e-19	6.52e-17	-6.82e+00	1.02e+01	2.46e-01	3.28e+00	1.97e-03	9.83e+00	1.03e+01	1.04e+01	1.92e-01	2.57e-01	2.89e-01	2.58e+00	3.81e+00	3.46e+00	1.06e-03	2.74e-03	2.11e-03
chr8	105932003	105933862	ENSMUSG00000031896	0.5430	-	Ctrl	protein_coding	3.70e-19	7.73e-17	-8.00e+00	7.99e+00	9.96e-02	0.00e+00	0.00e+00	8.00e+00	8.21e+00	7.75e+00	9.96e-02	1.16e-01	8.36e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	115097689	115098295	ENSMUSG00000072693	0.4168	-	Gm10401	protein_coding	3.82e-19	7.89e-17	-7.74e+00	8.16e+00	2.24e-01	3.33e-01	2.62e-04	8.00e+00	8.20e+00	8.27e+00	2.00e-01	2.30e-01	2.41e-01	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.85e-04	0.00e+00
chr16	58468125	58524243	ENSMUSG00000022747	0.4252	-	St3gal6	protein_coding	4.07e-19	8.30e-17	-7.97e+00	7.96e+00	2.46e-02	0.00e+00	0.00e+00	7.83e+00	7.95e+00	8.11e+00	2.23e-02	2.43e-02	2.73e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	36090379	36091829	ENSMUSG00000059301	0.4673	+	Gm5434	protein_coding	5.86e-19	1.18e-16	-8.00e+00	7.98e+00	1.42e-01	0.00e+00	0.00e+00	8.28e+00	7.71e+00	7.95e+00	1.73e-01	1.16e-01	1.38e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	39371492	39478755	ENSMUSG00000003134	0.4730	-	Tbc1d8	protein_coding	7.92e-19	1.58e-16	-6.87e+00	8.98e+00	2.33e-02	2.08e+00	1.54e-04	9.10e+00	8.98e+00	8.86e+00	2.53e-02	2.32e-02	2.14e-02	2.32e+00	1.58e+00	2.32e+00	1.84e-04	9.22e-05	1.84e-04
chr12	72101292	72185029	ENSMUSG00000021086	0.4139	-	Ccdc175	protein_coding	8.30e-19	1.64e-16	-7.93e+00	7.92e+00	1.78e-01	0.00e+00	0.00e+00	7.70e+00	7.89e+00	8.16e+00	1.51e-01	1.73e-01	2.08e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	108950003	108950541	ENSMUSG00000103754	0.5566	-	Gm37284	TEC	1.01e-18	1.96e-16	-8.01e+00	7.98e+00	2.05e-01	0.00e+00	0.00e+00	8.43e+00	7.69e+00	7.81e+00	2.74e-01	1.64e-01	1.79e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr13	3566036	3611108	ENSMUSG00000033799	0.3807	-	Fam208b	protein_coding	1.02e-18	1.96e-16	-6.94e+00	9.04e+00	2.82e-01	1.58e+00	1.77e-03	9.26e+00	9.00e+00	8.86e+00	3.26e-01	2.72e-01	2.47e-01	0.00e+00	3.17e+00	1.58e+00	0.00e+00	4.25e-03	1.06e-03
chr17	25786580	25790513	ENSMUSG00000071202	0.5399	+	Ccdc78	protein_coding	1.11e-18	2.12e-16	-7.92e+00	7.92e+00	1.55e-01	0.00e+00	0.00e+00	8.03e+00	7.85e+00	7.87e+00	1.68e-01	1.47e-01	1.50e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	3280627	3303526	ENSMUSG00000091119	0.3855	-	Ccdc152	protein_coding	1.84e-18	3.48e-16	-7.99e+00	7.98e+00	2.02e-01	0.00e+00	0.00e+00	8.17e+00	7.73e+00	8.03e+00	2.30e-01	1.69e-01	2.08e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	41769467	41774247	ENSMUSG00000073888	0.5227	-	Ccl27a	protein_coding	3.05e-18	5.71e-16	-6.41e+00	1.10e+01	4.75e-01	4.60e+00	5.37e-03	1.10e+01	1.08e+01	1.13e+01	4.55e-01	4.06e-01	5.65e-01	4.32e+00	4.52e+00	4.95e+00	4.31e-03	4.99e-03	6.80e-03
chr11	115974709	116008412	ENSMUSG00000020758	0.5360	+	Itgb4	protein_coding	3.67e-18	6.81e-16	-7.56e+00	7.97e+00	3.81e-02	3.33e-01	5.06e-05	8.10e+00	7.99e+00	7.83e+00	4.15e-02	3.84e-02	3.43e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	1.52e-04
chr5	144264526	144358112	ENSMUSG00000038859	0.4482	-	Baiap2l1	protein_coding	4.33e-18	7.95e-16	-6.54e+00	1.02e+01	3.14e-01	3.72e+00	3.13e-03	1.01e+01	9.84e+00	1.07e+01	2.86e-01	2.32e-01	4.23e-01	3.91e+00	3.46e+00	3.81e+00	3.55e-03	2.54e-03	3.30e-03
chr7	120658731	120670343	ENSMUSG00000030887	0.4401	-	Pdzd9	protein_coding	5.03e-18	9.13e-16	-7.73e+00	7.73e+00	5.40e-02	0.00e+00	0.00e+00	7.54e+00	7.82e+00	7.82e+00	4.72e-02	5.74e-02	5.74e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	101260567	101277409	ENSMUSG00000035112	0.5101	+	Wnk4	protein_coding	5.94e-18	1.07e-15	-7.12e+00	8.33e+00	1.56e-02	7.74e-01	6.46e-05	8.45e+00	8.19e+00	8.36e+00	1.69e-02	1.42e-02	1.59e-02	0.00e+00	2.32e+00	0.00e+00	0.00e+00	1.94e-04	0.00e+00
chr7	83642825	83745726	ENSMUSG00000001741	0.4512	-	Il16	protein_coding	6.37e-18	1.13e-15	-7.61e+00	8.00e+00	1.64e-02	3.33e-01	2.11e-05	7.63e+00	8.22e+00	8.16e+00	1.24e-02	1.88e-02	1.80e-02	0.00e+00	1.00e+00	0.00e+00	0.00e+00	6.32e-05	0.00e+00
chr17	34613349	34615971	ENSMUSG00000015467	0.5791	-	Egfl8	protein_coding	7.86e-18	1.39e-15	-6.62e+00	9.15e+00	1.41e-01	2.57e+00	1.19e-03	9.69e+00	8.79e+00	8.99e+00	1.96e-01	1.05e-01	1.21e-01	2.58e+00	2.81e+00	2.32e+00	1.19e-03	1.43e-03	9.55e-04
chr11	97048691	97051432	ENSMUSG00000085262	0.5255	-	Gm11574	processed_transcript	8.29e-18	1.45e-15	-7.77e+00	7.76e+00	1.73e-01	0.00e+00	0.00e+00	7.86e+00	7.63e+00	7.80e+00	1.85e-01	1.57e-01	1.77e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	28807205	28813985	ENSMUSG00000104444	0.4150	-	Gm33051	antisense	9.07e-18	1.57e-15	-7.65e+00	7.63e+00	1.59e-01	0.00e+00	0.00e+00	7.34e+00	7.78e+00	7.77e+00	1.28e-01	1.75e-01	1.74e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	42358487	42373268	ENSMUSG00000029859	0.4893	-	Epha1	protein_coding	9.63e-18	1.65e-15	-6.40e+00	9.90e+00	3.43e-01	3.36e+00	3.71e-03	1.00e+01	9.81e+00	9.87e+00	3.74e-01	3.21e-01	3.36e-01	2.58e+00	4.17e+00	3.32e+00	1.79e-03	6.10e-03	3.23e-03
chr3	104794836	104818563	ENSMUSG00000002227	0.4862	-	Mov10	protein_coding	1.06e-17	1.79e-15	-6.21e+00	1.18e+01	1.39e-01	5.53e+00	1.85e-03	1.19e+01	1.15e+01	1.19e+01	1.51e-01	1.17e-01	1.49e-01	5.55e+00	5.13e+00	5.91e+00	1.83e-03	1.35e-03	2.35e-03
chr11	101339660	101347939	ENSMUSG00000101925	0.4345	-	Gm28156	antisense	1.25e-17	2.10e-15	-7.51e+00	7.40e+00	1.44e-01	0.00e+00	0.00e+00	6.64e+00	7.98e+00	7.59e+00	7.89e-02	2.00e-01	1.53e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	71795795	72034227	ENSMUSG00000079022	0.4426	-	Col22a1	protein_coding	1.36e-17	2.26e-15	-7.19e+00	7.90e+00	2.83e-02	6.67e-01	7.75e-05	8.03e+00	8.20e+00	7.45e+00	3.03e-02	3.42e-02	2.02e-02	1.00e+00	0.00e+00	1.00e+00	1.16e-04	0.00e+00	1.16e-04
chr12	79130777	79156301	ENSMUSG00000021125	0.4294	+	Arg2	protein_coding	1.42e-17	2.35e-15	-7.72e+00	7.72e+00	1.38e-01	0.00e+00	0.00e+00	7.71e+00	7.61e+00	7.83e+00	1.37e-01	1.27e-01	1.48e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	43427019	43429134	ENSMUSG00000042788	0.5425	-	Fam166b	protein_coding	1.58e-17	2.58e-15	-7.66e+00	7.66e+00	4.95e-02	0.00e+00	0.00e+00	7.67e+00	7.62e+00	7.69e+00	4.98e-02	4.81e-02	5.06e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	24502757	24527202	ENSMUSG00000067724	0.4991	-	Gbx1	protein_coding	1.60e-17	2.59e-15	-7.11e+00	8.31e+00	1.04e-01	1.19e+00	4.32e-04	8.19e+00	8.08e+00	8.65e+00	9.43e-02	8.72e-02	1.30e-01	1.00e+00	1.58e+00	1.00e+00	3.24e-04	6.48e-04	3.24e-04
chr16	32475522	32487879	ENSMUSG00000035699	0.4808	-	Slc51a	protein_coding	1.75e-17	2.82e-15	-7.33e+00	7.73e+00	1.45e-01	3.33e-01	2.26e-04	7.86e+00	7.91e+00	7.42e+00	1.57e-01	1.62e-01	1.15e-01	1.00e+00	0.00e+00	0.00e+00	6.78e-04	0.00e+00	0.00e+00
chr11	51584757	51604489	ENSMUSG00000020359	0.4734	+	Phykpl	protein_coding	1.79e-17	2.83e-15	-6.17e+00	1.08e+01	1.14e-01	4.58e+00	1.51e-03	1.06e+01	1.09e+01	1.07e+01	1.03e-01	1.28e-01	1.09e-01	4.46e+00	4.75e+00	4.52e+00	1.38e-03	1.71e-03	1.44e-03
chr13	55325168	55329758	ENSMUSG00000021485	0.5450	-	Mxd3	protein_coding	1.79e-17	2.83e-15	-6.39e+00	9.71e+00	4.48e-01	3.20e+00	4.82e-03	9.54e+00	9.77e+00	9.81e+00	3.99e-01	4.66e-01	4.78e-01	3.81e+00	3.46e+00	2.32e+00	6.96e-03	5.35e-03	2.14e-03
chr15	78850862	78855529	ENSMUSG00000043501	0.5120	-	Lgals2	protein_coding	1.86e-17	2.91e-15	-7.83e+00	7.82e+00	1.62e-01	0.00e+00	0.00e+00	7.89e+00	7.55e+00	8.01e+00	1.69e-01	1.33e-01	1.84e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	24488783	24508905	ENSMUSG00000033597	0.5544	+	Caskin1	protein_coding	2.56e-17	3.97e-15	-7.58e+00	8.00e+00	8.66e-02	3.33e-01	1.13e-04	8.08e+00	7.88e+00	8.03e+00	9.17e-02	7.99e-02	8.83e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	3.40e-04
chr10	86055125	86498896	ENSMUSG00000059602	0.4537	-	Syn3	protein_coding	2.78e-17	4.28e-15	-7.68e+00	7.67e+00	1.86e-02	0.00e+00	0.00e+00	7.69e+00	7.46e+00	7.85e+00	1.88e-02	1.60e-02	2.10e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	45233632	45239115	ENSMUSG00000030798	0.5450	-	Cd37	protein_coding	2.93e-17	4.47e-15	-7.71e+00	7.71e+00	4.23e-02	0.00e+00	0.00e+00	7.81e+00	7.67e+00	7.64e+00	4.56e-02	4.11e-02	4.03e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	181576559	181815774	ENSMUSG00000047369	0.4257	+	Dnah14	protein_coding	3.36e-17	5.08e-15	-7.74e+00	7.73e+00	2.37e-02	0.00e+00	0.00e+00	7.54e+00	7.64e+00	8.01e+00	2.06e-02	2.21e-02	2.84e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	46038935	46116032	ENSMUSG00000028328	0.4920	+	Tmod1	protein_coding	3.59e-17	5.39e-15	-6.48e+00	8.80e+00	8.18e-02	2.30e+00	7.36e-04	8.81e+00	8.71e+00	8.86e+00	8.27e-02	7.71e-02	8.56e-02	2.00e+00	2.32e+00	2.58e+00	5.52e-04	7.36e-04	9.20e-04
chr11	94644996	94653964	ENSMUSG00000039055	0.4822	-	Eme1	protein_coding	3.88e-17	5.77e-15	-7.67e+00	7.65e+00	3.71e-02	0.00e+00	0.00e+00	7.92e+00	7.61e+00	7.42e+00	4.42e-02	3.58e-02	3.12e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	35371546	35931228	ENSMUSG00000037646	0.3916	+	Vps13b	protein_coding	4.19e-17	6.19e-15	-6.21e+00	1.00e+01	4.46e-01	3.83e+00	5.60e-03	1.01e+01	9.85e+00	1.02e+01	4.64e-01	3.86e-01	4.87e-01	4.09e+00	3.58e+00	3.81e+00	6.72e-03	4.62e-03	5.46e-03
chr10	93540632	93584327	ENSMUSG00000036168	0.4470	+	Ccdc38	protein_coding	5.04e-17	7.38e-15	-7.35e+00	7.68e+00	3.89e-02	3.33e-01	5.97e-05	7.58e+00	7.12e+00	8.34e+00	3.41e-02	2.47e-02	5.79e-02	1.00e+00	0.00e+00	0.00e+00	1.79e-04	0.00e+00	0.00e+00
chr2	26916367	26920183	ENSMUSG00000014873	0.5258	+	Surf2	protein_coding	5.15e-17	7.48e-15	-6.06e+00	1.09e+01	1.19e+00	4.82e+00	1.72e-02	1.10e+01	1.08e+01	1.10e+01	1.23e+00	1.10e+00	1.25e+00	4.86e+00	4.39e+00	5.21e+00	1.72e-02	1.23e-02	2.22e-02
chr17	35994453	36038435	ENSMUSG00000092368	0.4683	+	A930015D03Rik	antisense	6.53e-17	9.42e-15	-7.67e+00	7.66e+00	1.61e-01	0.00e+00	0.00e+00	7.75e+00	7.55e+00	7.69e+00	1.71e-01	1.48e-01	1.63e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	149144263	149153540	ENSMUSG00000107388	0.4528	+	Gm42788	lincRNA	6.88e-17	9.84e-15	-7.74e+00	7.73e+00	1.70e-01	0.00e+00	0.00e+00	7.97e+00	7.72e+00	7.50e+00	1.99e-01	1.67e-01	1.44e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69655314	69656727	ENSMUSG00000041287	0.5750	+	Sox15	protein_coding	7.59e-17	1.08e-14	-7.74e+00	7.70e+00	1.56e-01	0.00e+00	0.00e+00	7.43e+00	7.53e+00	8.14e+00	1.26e-01	1.35e-01	2.07e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	116410077	116461178	ENSMUSG00000025701	0.4476	-	Alox5	protein_coding	9.77e-17	1.38e-14	-7.64e+00	7.62e+00	2.93e-02	0.00e+00	0.00e+00	7.33e+00	7.53e+00	7.98e+00	2.36e-02	2.72e-02	3.72e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69964779	69967885	ENSMUSG00000018569	0.5848	+	Cldn7	protein_coding	1.68e-16	2.35e-14	-7.57e+00	7.51e+00	6.90e-02	0.00e+00	0.00e+00	7.29e+00	7.19e+00	8.07e+00	5.65e-02	5.29e-02	9.74e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	134102570	134127593	ENSMUSG00000012126	0.5335	+	Ubxn11	protein_coding	1.77e-16	2.46e-14	-6.43e+00	8.74e+00	3.96e-02	2.25e+00	3.68e-04	8.91e+00	8.50e+00	8.81e+00	4.42e-02	3.33e-02	4.12e-02	2.58e+00	2.58e+00	1.58e+00	4.60e-04	4.60e-04	1.84e-04
chr11	120489406	120492394	ENSMUSG00000086929	0.5490	-	Gm11788	antisense	1.96e-16	2.70e-14	-7.58e+00	7.57e+00	1.52e-01	0.00e+00	0.00e+00	7.81e+00	7.30e+00	7.59e+00	1.78e-01	1.25e-01	1.53e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	5058128	5060385	ENSMUSG00000034209	0.5735	+	Rasl10a	protein_coding	2.13e-16	2.92e-14	-7.55e+00	7.53e+00	1.18e-01	0.00e+00	0.00e+00	7.78e+00	7.28e+00	7.54e+00	1.39e-01	9.77e-02	1.17e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	79860475	79874634	ENSMUSG00000035835	0.5350	-	Plppr3	protein_coding	2.85e-16	3.86e-14	-6.16e+00	8.66e+00	5.28e-02	2.27e+00	6.10e-04	8.66e+00	8.74e+00	8.58e+00	5.28e-02	5.57e-02	4.98e-02	1.00e+00	2.81e+00	3.00e+00	1.31e-04	7.85e-04	9.15e-04
chr7	122169893	122186207	ENSMUSG00000030866	0.4982	-	Ern2	protein_coding	3.33e-16	4.48e-14	-7.02e+00	8.05e+00	1.12e-01	7.74e-01	4.95e-04	7.88e+00	7.24e+00	9.03e+00	8.68e-02	5.57e-02	1.93e-01	2.32e+00	0.00e+00	0.00e+00	1.48e-03	0.00e+00	0.00e+00
chr11	72451638	72489904	ENSMUSG00000040447	0.5254	-	Spns2	protein_coding	3.35e-16	4.48e-14	-7.30e+00	7.70e+00	4.18e-02	3.33e-01	6.68e-05	7.64e+00	7.97e+00	7.48e+00	3.99e-02	5.01e-02	3.55e-02	1.00e+00	0.00e+00	0.00e+00	2.00e-04	0.00e+00	0.00e+00
chr7	45481877	45523632	ENSMUSG00000023467	0.4946	+	Tulp2	protein_coding	3.56e-16	4.72e-14	-7.34e+00	7.75e+00	3.03e-02	3.33e-01	4.71e-05	7.61e+00	7.87e+00	7.76e+00	2.74e-02	3.29e-02	3.05e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	1.41e-04
chr6	52162417	52164831	ENSMUSG00000014704	0.4965	-	Hoxa2	protein_coding	4.49e-16	5.92e-14	-7.23e+00	7.63e+00	1.15e-01	3.33e-01	1.93e-04	7.55e+00	7.43e+00	7.90e+00	1.09e-01	9.92e-02	1.38e-01	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	5.80e-04
chr14	55618037	55625395	ENSMUSG00000002324	0.5205	+	Rec8	protein_coding	5.02e-16	6.56e-14	-7.54e+00	7.54e+00	4.88e-02	0.00e+00	0.00e+00	7.67e+00	7.36e+00	7.58e+00	5.35e-02	4.29e-02	5.01e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	30888694	30906965	ENSMUSG00000029165	0.4870	+	Agbl5	protein_coding	5.74e-16	7.45e-14	-5.97e+00	9.77e+00	7.64e-02	3.85e+00	1.14e-03	9.62e+00	9.28e+00	1.04e+01	6.55e-02	5.16e-02	1.12e-01	3.58e+00	4.17e+00	3.81e+00	9.15e-04	1.41e-03	1.08e-03
chr9	106463962	106465938	ENSMUSG00000091735	0.6297	-	Gpr62	protein_coding	5.84e-16	7.53e-14	-6.93e+00	7.90e+00	1.44e-01	6.67e-01	5.92e-04	7.55e+00	8.29e+00	7.85e+00	1.11e-01	1.84e-01	1.36e-01	0.00e+00	2.00e+00	0.00e+00	0.00e+00	1.78e-03	0.00e+00
chr11	29526408	29545279	ENSMUSG00000020459	0.3929	+	Mtif2	protein_coding	6.13e-16	7.84e-14	-5.81e+00	1.19e+01	5.09e-01	6.14e+00	8.95e-03	1.19e+01	1.17e+01	1.22e+01	4.93e-01	4.22e-01	6.13e-01	6.32e+00	6.21e+00	5.88e+00	1.01e-02	9.33e-03	7.41e-03
chr11	69396519	69398234	ENSMUSG00000045377	0.5606	-	Tmem88	protein_coding	7.14e-16	9.08e-14	-6.85e+00	7.84e+00	9.79e-02	6.67e-01	4.26e-04	7.67e+00	7.92e+00	7.94e+00	8.65e-02	1.03e-01	1.04e-01	2.00e+00	0.00e+00	0.00e+00	1.28e-03	0.00e+00	0.00e+00
chr2	155775342	155818366	ENSMUSG00000027612	0.4902	+	Mmp24	protein_coding	7.81e-16	9.85e-14	-7.51e+00	7.51e+00	3.76e-02	0.00e+00	0.00e+00	7.64e+00	7.36e+00	7.53e+00	4.10e-02	3.38e-02	3.81e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	141633456	141655319	ENSMUSG00000048191	0.5300	-	Muc6	protein_coding	1.01e-15	1.27e-13	-7.40e+00	7.39e+00	8.33e-02	0.00e+00	0.00e+00	7.46e+00	7.18e+00	7.54e+00	8.68e-02	7.14e-02	9.18e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	5406740	5422847	ENSMUSG00000086938	0.4815	+	4930481A15Rik	antisense	1.09e-15	1.36e-13	-5.97e+00	9.28e+00	1.62e-01	3.18e+00	2.33e-03	9.46e+00	9.07e+00	9.31e+00	1.82e-01	1.39e-01	1.64e-01	3.91e+00	3.32e+00	2.32e+00	3.62e-03	2.33e-03	1.03e-03
chr2	32925216	32961614	ENSMUSG00000026792	0.5183	-	Lrsam1	protein_coding	1.18e-15	1.46e-13	-5.78e+00	9.77e+00	4.88e-02	3.93e+00	8.33e-04	9.57e+00	9.69e+00	1.00e+01	4.23e-02	4.57e-02	5.84e-02	3.46e+00	3.81e+00	4.52e+00	5.55e-04	7.22e-04	1.22e-03
chr14	46379414	46383608	ENSMUSG00000079261	0.4923	+	Gm15217	protein_coding	1.19e-15	1.46e-13	-6.61e+00	7.82e+00	1.50e-01	1.06e+00	8.78e-04	8.10e+00	7.71e+00	7.66e+00	1.80e-01	1.38e-01	1.32e-01	0.00e+00	1.58e+00	1.58e+00	0.00e+00	1.32e-03	1.32e-03
chr5	48389502	49524907	ENSMUSG00000029088	0.3778	-	Kcnip4	protein_coding	1.24e-15	1.51e-13	-7.46e+00	7.43e+00	4.49e-02	0.00e+00	0.00e+00	7.13e+00	7.32e+00	7.85e+00	3.55e-02	4.06e-02	5.85e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr16	56477846	56690128	ENSMUSG00000035258	0.3922	+	Abi3bp	protein_coding	1.27e-15	1.53e-13	-7.36e+00	7.33e+00	6.99e-02	0.00e+00	0.00e+00	7.66e+00	7.34e+00	7.00e+00	8.62e-02	6.90e-02	5.44e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	97673031	97674694	ENSMUSG00000090441	0.4189	-	Gm17651	protein_coding	1.44e-15	1.74e-13	-7.09e+00	7.06e+00	1.08e-01	0.00e+00	0.00e+00	7.17e+00	7.36e+00	6.64e+00	1.14e-01	1.30e-01	7.89e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	85575676	85577295	ENSMUSG00000094127	0.4617	+	G530012D18Rik	protein_coding	1.46e-15	1.75e-13	-7.35e+00	7.29e+00	1.30e-01	0.00e+00	0.00e+00	6.69e+00	7.53e+00	7.67e+00	8.13e-02	1.47e-01	1.61e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69340461	69342641	ENSMUSG00000043419	0.4888	+	Chd3os	protein_coding	1.78e-15	2.12e-13	-5.93e+00	8.80e+00	1.66e-01	2.69e+00	2.36e-03	8.69e+00	8.91e+00	8.80e+00	1.54e-01	1.79e-01	1.66e-01	1.58e+00	3.32e+00	3.17e+00	7.46e-04	3.36e-03	2.98e-03
chr17	26195999	26199087	ENSMUSG00000024184	0.5458	-	Pdia2	protein_coding	1.81e-15	2.14e-13	-7.36e+00	7.31e+00	6.29e-02	0.00e+00	0.00e+00	6.95e+00	7.81e+00	7.17e+00	4.75e-02	8.61e-02	5.52e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	108555467	108556904	ENSMUSG00000105810	0.4103	+	Gm43435	TEC	2.06e-15	2.41e-13	-6.68e+00	7.87e+00	1.90e-01	1.00e+00	1.06e-03	7.40e+00	8.17e+00	8.03e+00	1.34e-01	2.30e-01	2.07e-01	0.00e+00	2.00e+00	1.00e+00	0.00e+00	2.39e-03	7.97e-04
chr3	95236920	95241598	ENSMUSG00000068860	0.5012	-	Gm128	protein_coding	3.25e-15	3.79e-13	-7.35e+00	7.34e+00	1.05e-01	0.00e+00	0.00e+00	7.22e+00	7.18e+00	7.61e+00	9.59e-02	9.33e-02	1.26e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	25242659	25256364	ENSMUSG00000047507	0.5719	-	Baiap3	protein_coding	3.64e-15	4.21e-13	-7.33e+00	7.29e+00	2.66e-02	0.00e+00	0.00e+00	7.38e+00	6.87e+00	7.64e+00	2.75e-02	1.93e-02	3.30e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	45026906	45046614	ENSMUSG00000074818	0.5288	-	Pdzd7	protein_coding	5.08e-15	5.84e-13	-7.20e+00	7.18e+00	7.42e-02	0.00e+00	0.00e+00	6.92e+00	7.49e+00	7.12e+00	6.11e-02	9.12e-02	7.03e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	121204433	121222655	ENSMUSG00000039307	0.4815	+	Hexdc	protein_coding	8.05e-15	9.20e-13	-6.36e+00	7.94e+00	4.60e-02	1.44e+00	3.74e-04	8.00e+00	7.78e+00	8.05e+00	4.76e-02	4.09e-02	4.93e-02	1.00e+00	1.00e+00	2.32e+00	1.87e-04	1.87e-04	7.47e-04
chr9	108337089	108338273	ENSMUSG00000104208	0.4160	-	Gm37401	antisense	9.56e-15	1.09e-12	-6.11e+00	8.10e+00	2.19e-01	1.97e+00	2.39e-03	7.97e+00	8.14e+00	8.20e+00	1.99e-01	2.25e-01	2.34e-01	2.00e+00	2.32e+00	1.58e+00	2.39e-03	3.19e-03	1.59e-03
chr9	109057933	109059734	ENSMUSG00000049734	0.5766	-	Trex1	protein_coding	9.74e-15	1.09e-12	-5.57e+00	9.53e+00	5.71e-01	3.94e+00	1.13e-02	9.32e+00	9.66e+00	9.60e+00	4.92e-01	6.24e-01	5.96e-01	4.32e+00	3.91e+00	3.58e+00	1.46e-02	1.08e-02	8.47e-03
chr19	5092871	5098418	ENSMUSG00000024873	0.5624	-	Cnih2	protein_coding	9.75e-15	1.09e-12	-6.43e+00	7.85e+00	1.24e-01	1.11e+00	8.99e-04	7.90e+00	7.83e+00	7.81e+00	1.28e-01	1.23e-01	1.21e-01	2.32e+00	0.00e+00	1.00e+00	2.16e-03	0.00e+00	5.40e-04
chr9	21405242	21411720	ENSMUSG00000097665	0.4893	-	Gm16853	antisense	1.00e-14	1.12e-12	-7.12e+00	7.11e+00	1.10e-01	0.00e+00	0.00e+00	7.37e+00	6.88e+00	7.07e+00	1.31e-01	9.33e-02	1.06e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr13	55464267	55473155	ENSMUSG00000034686	0.5631	+	Prr7	protein_coding	1.10e-14	1.21e-12	-5.75e+00	8.79e+00	3.16e-01	2.92e+00	5.17e-03	8.76e+00	9.09e+00	8.52e+00	3.05e-01	3.83e-01	2.59e-01	3.58e+00	3.17e+00	2.00e+00	7.75e-03	5.64e-03	2.11e-03
chr13	28943048	28951671	ENSMUSG00000097461	0.4381	+	Gm26735	lincRNA	1.12e-14	1.23e-12	-7.41e+00	7.36e+00	1.35e-01	0.00e+00	0.00e+00	6.85e+00	7.41e+00	7.81e+00	9.09e-02	1.35e-01	1.79e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr14	13918444	13949558	ENSMUSG00000079357	0.4247	+	Gm11100	antisense	1.14e-14	1.25e-12	-7.22e+00	7.18e+00	1.18e-01	0.00e+00	0.00e+00	7.13e+00	7.61e+00	6.79e+00	1.11e-01	1.56e-01	8.77e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	23660523	23668610	ENSMUSG00000043782	0.5378	+	Ccdc64b	protein_coding	1.43e-14	1.56e-12	-7.24e+00	7.24e+00	9.40e-02	0.00e+00	0.00e+00	7.11e+00	7.19e+00	7.41e+00	8.56e-02	9.06e-02	1.06e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chrX	134588149	134601125	ENSMUSG00000031266	0.4258	-	Gla	protein_coding	1.62e-14	1.75e-12	-5.50e+00	1.01e+01	2.57e-01	4.33e+00	5.44e-03	9.99e+00	9.92e+00	1.03e+01	2.40e-01	2.28e-01	3.02e-01	5.17e+00	4.81e+00	3.00e+00	8.28e-03	6.39e-03	1.66e-03
chr1	23761753	23849158	ENSMUSG00000026156	0.4316	+	B3gat2	protein_coding	1.65e-14	1.77e-12	-7.15e+00	7.15e+00	2.11e-02	0.00e+00	0.00e+00	7.19e+00	7.27e+00	6.99e+00	2.17e-02	2.29e-02	1.89e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	34597862	34600936	ENSMUSG00000015452	0.5626	+	Ager	protein_coding	1.69e-14	1.81e-12	-7.12e+00	7.11e+00	5.31e-02	0.00e+00	0.00e+00	7.09e+00	7.00e+00	7.25e+00	5.21e-02	4.90e-02	5.83e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	135963727	135968178	ENSMUSG00000028671	0.5833	+	Gale	protein_coding	1.84e-14	1.96e-12	-5.79e+00	8.71e+00	9.87e-02	2.60e+00	1.55e-03	8.35e+00	8.73e+00	9.04e+00	7.58e-02	9.86e-02	1.22e-01	1.58e+00	3.91e+00	2.32e+00	4.65e-04	3.26e-03	9.30e-04
chr17	24527241	24534210	ENSMUSG00000079657	0.5366	-	Rab26	protein_coding	2.84e-14	3.01e-12	-6.89e+00	7.30e+00	4.42e-02	3.33e-01	9.39e-05	7.25e+00	7.39e+00	7.27e+00	4.25e-02	4.71e-02	4.31e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	2.82e-04
chr19	5845623	5851388	ENSMUSG00000043488	0.5309	+	Frmd8os	antisense	2.89e-14	3.04e-12	-6.64e+00	7.57e+00	1.56e-01	8.62e-01	7.87e-04	8.20e+00	7.27e+00	7.24e+00	2.31e-01	1.20e-01	1.18e-01	1.58e+00	1.00e+00	0.00e+00	1.57e-03	7.87e-04	0.00e+00
chr6	88503605	88504277	ENSMUSG00000107659	0.5721	+	Gm44170	antisense	4.29e-14	4.48e-12	-7.12e+00	7.10e+00	1.10e-01	0.00e+00	0.00e+00	6.83e+00	7.41e+00	7.07e+00	9.01e-02	1.35e-01	1.06e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	129608331	129614257	ENSMUSG00000078552	0.5205	-	Dcdc2b	protein_coding	4.40e-14	4.57e-12	-6.69e+00	7.42e+00	1.03e-01	5.28e-01	3.99e-04	7.19e+00	7.51e+00	7.56e+00	8.68e-02	1.08e-01	1.13e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.20e-03	0.00e+00
chr4	116551740	116552627	ENSMUSG00000087299	0.4077	+	Gm12953	antisense	4.46e-14	4.60e-12	-6.60e+00	7.60e+00	1.79e-01	7.74e-01	1.06e-03	7.48e+00	6.70e+00	8.63e+00	1.41e-01	8.21e-02	3.14e-01	0.00e+00	2.32e+00	0.00e+00	0.00e+00	3.19e-03	0.00e+00
chr3	95296096	95307176	ENSMUSG00000015702	0.4791	-	Anxa9	protein_coding	4.59e-14	4.71e-12	-6.47e+00	7.68e+00	6.42e-02	1.06e+00	4.16e-04	7.90e+00	7.70e+00	7.43e+00	7.43e-02	6.46e-02	5.37e-02	0.00e+00	1.58e+00	1.58e+00	0.00e+00	6.25e-04	6.25e-04
chr5	115333239	115341178	ENSMUSG00000029536	0.4571	-	Gatc	protein_coding	4.75e-14	4.85e-12	-5.32e+00	9.60e+00	3.11e-01	4.30e+00	7.44e-03	1.00e+01	9.37e+00	9.40e+00	4.11e-01	2.59e-01	2.64e-01	4.00e+00	4.58e+00	4.32e+00	5.87e-03	9.01e-03	7.44e-03
chr6	48847659	48863107	ENSMUSG00000107597	0.4503	-	Gm44764	processed_transcript	5.12e-14	5.20e-12	-7.26e+00	7.59e+00	8.08e-02	3.33e-01	1.33e-04	8.22e+00	7.47e+00	7.09e+00	1.18e-01	7.02e-02	5.38e-02	0.00e+00	1.00e+00	0.00e+00	0.00e+00	3.99e-04	0.00e+00
chr15	98571004	98589588	ENSMUSG00000022993	0.4567	+	4930415O20Rik	protein_coding	5.81e-14	5.87e-12	-7.11e+00	7.08e+00	9.94e-02	0.00e+00	0.00e+00	6.73e+00	7.11e+00	7.42e+00	7.60e-02	9.91e-02	1.23e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	125145241	125161782	ENSMUSG00000038271	0.5355	+	Iffo1	protein_coding	6.32e-14	6.34e-12	-5.47e+00	9.10e+00	6.51e-02	3.28e+00	1.36e-03	9.14e+00	8.72e+00	9.44e+00	6.57e-02	4.89e-02	8.06e-02	1.58e+00	4.17e+00	4.09e+00	2.33e-04	1.98e-03	1.86e-03
chr2	118388618	118475234	ENSMUSG00000005102	0.4479	+	Eif2ak4	protein_coding	7.20e-14	7.19e-12	-5.34e+00	9.61e+00	1.32e-01	4.27e+00	3.09e-03	9.45e+00	9.52e+00	9.85e+00	1.17e-01	1.24e-01	1.55e-01	4.39e+00	4.32e+00	4.09e+00	3.37e-03	3.20e-03	2.70e-03
chr7	126847416	126852705	ENSMUSG00000052301	0.5864	+	Doc2a	protein_coding	8.38e-14	8.32e-12	-7.14e+00	7.12e+00	1.91e-02	0.00e+00	0.00e+00	6.86e+00	7.17e+00	7.34e+00	1.57e-02	1.95e-02	2.20e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	121598703	121652901	ENSMUSG00000061410	0.5160	-	Zcchc14	protein_coding	1.06e-13	1.04e-11	-5.15e+00	1.03e+01	1.82e-01	5.23e+00	5.00e-03	1.08e+01	1.01e+01	1.02e+01	2.43e-01	1.46e-01	1.56e-01	5.43e+00	5.21e+00	5.04e+00	5.73e-03	4.91e-03	4.36e-03
chr6	113631649	113633144	ENSMUSG00000097671	0.5107	-	1700015O11Rik	lincRNA	1.10e-13	1.07e-11	-6.85e+00	6.80e+00	9.09e-02	0.00e+00	0.00e+00	6.92e+00	7.17e+00	6.32e+00	9.57e-02	1.14e-01	6.30e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	117866524	117872557	ENSMUSG00000078588	0.5474	-	Ccdc24	protein_coding	1.10e-13	1.07e-11	-6.15e+00	7.65e+00	2.59e-02	1.58e+00	2.44e-04	8.18e+00	7.83e+00	6.93e+00	3.53e-02	2.77e-02	1.47e-02	1.58e+00	1.58e+00	1.58e+00	2.44e-04	2.44e-04	2.44e-04
chr8	70766579	70768220	ENSMUSG00000110575	0.5542	+	RP23-410L16.8	TEC	1.13e-13	1.10e-11	-7.06e+00	7.01e+00	1.05e-01	0.00e+00	0.00e+00	7.46e+00	6.99e+00	6.58e+00	1.40e-01	1.00e-01	7.58e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	102436981	102447682	ENSMUSG00000034685	0.5747	-	Fam171a2	protein_coding	1.42e-13	1.37e-11	-5.19e+00	1.28e+01	1.67e+00	7.57e+00	4.54e-02	1.29e+01	1.23e+01	1.31e+01	1.80e+00	1.19e+00	2.01e+00	7.13e+00	7.75e+00	7.82e+00	3.28e-02	5.04e-02	5.30e-02
chr10	79781474	79790961	ENSMUSG00000020323	0.5038	-	Prss57	protein_coding	1.47e-13	1.42e-11	-6.80e+00	7.18e+00	4.74e-02	3.33e-01	1.07e-04	7.63e+00	7.10e+00	6.81e+00	6.31e-02	4.36e-02	3.56e-02	0.00e+00	1.00e+00	0.00e+00	0.00e+00	3.21e-04	0.00e+00
chr11	102835849	102838040	ENSMUSG00000020928	0.5192	+	Higd1b	protein_coding	1.50e-13	1.44e-11	-7.04e+00	7.02e+00	9.86e-02	0.00e+00	0.00e+00	6.69e+00	7.34e+00	7.02e+00	7.70e-02	1.22e-01	9.74e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chrX	73774405	73778925	ENSMUSG00000002007	0.5368	+	Srpk3	protein_coding	1.52e-13	1.45e-11	-6.79e+00	7.19e+00	9.30e-02	3.33e-01	2.11e-04	7.51e+00	7.06e+00	7.00e+00	1.15e-01	8.37e-02	8.05e-02	1.00e+00	0.00e+00	0.00e+00	6.34e-04	0.00e+00	0.00e+00
chr6	49085223	49214957	ENSMUSG00000029814	0.4397	-	Igf2bp3	protein_coding	1.57e-13	1.48e-11	-5.99e+00	7.71e+00	2.51e-02	1.64e+00	2.78e-04	7.81e+00	7.39e+00	7.91e+00	2.67e-02	1.99e-02	2.86e-02	1.58e+00	2.32e+00	1.00e+00	2.38e-04	4.77e-04	1.19e-04
chr4	43566928	43578873	ENSMUSG00000028467	0.5073	-	Gba2	protein_coding	1.75e-13	1.64e-11	-5.33e+00	8.95e+00	9.66e-02	3.63e+00	2.21e-03	9.27e+00	8.45e+00	9.14e+00	1.17e-01	6.59e-02	1.07e-01	3.91e+00	3.81e+00	3.17e+00	2.65e-03	2.46e-03	1.52e-03
chr11	100627543	100692455	ENSMUSG00000014198	0.5052	-	Zfp385c	protein_coding	2.09e-13	1.96e-11	-6.94e+00	6.94e+00	1.93e-02	0.00e+00	0.00e+00	6.92e+00	7.06e+00	6.83e+00	1.90e-02	2.09e-02	1.79e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	100713850	100714575	ENSMUSG00000017832	0.5978	+	Hspb9	protein_coding	2.26e-13	2.10e-11	-6.83e+00	7.23e+00	1.34e-01	3.33e-01	2.96e-04	7.22e+00	6.92e+00	7.54e+00	1.32e-01	1.07e-01	1.64e-01	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	8.89e-04
chr11	69913888	69916591	ENSMUSG00000023170	0.5521	+	Gps2	protein_coding	2.27e-13	2.11e-11	-5.10e+00	9.36e+00	2.46e-01	4.09e+00	6.79e-03	9.12e+00	9.55e+00	9.42e+00	2.06e-01	2.78e-01	2.53e-01	3.58e+00	3.58e+00	5.09e+00	4.07e-03	4.07e-03	1.22e-02
chr3	88328655	88336148	ENSMUSG00000001420	0.5149	-	Tmem79	protein_coding	2.48e-13	2.28e-11	-6.08e+00	7.49e+00	5.02e-02	1.33e+00	4.67e-04	7.57e+00	7.53e+00	7.38e+00	5.29e-02	5.15e-02	4.62e-02	2.00e+00	1.00e+00	1.00e+00	8.40e-04	2.80e-04	2.80e-04
chr7	102014885	102018690	ENSMUSG00000070427	0.4926	-	Il18bp	protein_coding	2.78e-13	2.55e-11	-5.82e+00	8.03e+00	1.05e-01	2.04e+00	1.47e-03	7.75e+00	8.24e+00	8.10e+00	8.62e-02	1.21e-01	1.10e-01	2.32e+00	2.81e+00	1.00e+00	1.60e-03	2.41e-03	4.01e-04
chr10	128395934	128401224	ENSMUSG00000039878	0.5566	-	Slc39a5	protein_coding	3.20e-13	2.92e-11	-7.04e+00	7.02e+00	9.53e-02	0.00e+00	0.00e+00	7.16e+00	6.74e+00	7.17e+00	1.04e-01	7.75e-02	1.05e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	120476526	120483932	ENSMUSG00000029597	0.5308	+	Sds	protein_coding	3.22e-13	2.92e-11	-6.76e+00	7.13e+00	5.01e-02	3.33e-01	1.16e-04	6.66e+00	7.27e+00	7.48e+00	3.49e-02	5.34e-02	6.18e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	3.49e-04
chr7	121981761	121989116	ENSMUSG00000108511	0.4496	+	Gm44987	antisense	3.52e-13	3.18e-11	-7.09e+00	7.06e+00	1.08e-01	0.00e+00	0.00e+00	6.74e+00	7.00e+00	7.43e+00	8.45e-02	1.01e-01	1.37e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	64029463	64032927	ENSMUSG00000097272	0.4266	+	Gm26649	lincRNA	4.94e-13	4.44e-11	-7.04e+00	7.02e+00	1.04e-01	0.00e+00	0.00e+00	6.97e+00	7.28e+00	6.83e+00	9.89e-02	1.23e-01	9.01e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	45896941	45917413	ENSMUSG00000002781	0.5009	+	Tmem143	protein_coding	5.19e-13	4.65e-11	-5.11e+00	9.16e+00	6.72e-02	4.05e+00	1.84e-03	9.26e+00	9.01e+00	9.21e+00	7.19e-02	6.03e-02	6.94e-02	3.91e+00	4.17e+00	4.09e+00	1.64e-03	1.99e-03	1.88e-03
chr9	44673233	44686305	ENSMUSG00000032098	0.5078	+	Treh	protein_coding	5.37e-13	4.78e-11	-7.04e+00	6.97e+00	1.12e-02	0.00e+00	0.00e+00	7.58e+00	6.58e+00	6.75e+00	1.62e-02	8.11e-03	9.14e-03	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	180258540	180273496	ENSMUSG00000038990	0.5294	-	Cables2	protein_coding	5.68e-13	5.03e-11	-4.95e+00	1.02e+01	1.83e-01	5.26e+00	5.78e-03	1.03e+01	1.03e+01	1.01e+01	1.89e-01	1.89e-01	1.71e-01	5.39e+00	5.04e+00	5.36e+00	6.29e-03	4.91e-03	6.14e-03
chr4	118362743	118409273	ENSMUSG00000033253	0.5204	-	Szt2	protein_coding	5.99e-13	5.28e-11	-5.41e+00	8.07e+00	2.02e-02	2.50e+00	4.05e-04	7.64e+00	7.87e+00	8.70e+00	1.42e-02	1.67e-02	2.97e-02	2.32e+00	1.58e+00	3.58e+00	2.86e-04	1.43e-04	7.86e-04
chr2	27021363	27027998	ENSMUSG00000036067	0.5582	-	Slc2a6	protein_coding	6.11e-13	5.36e-11	-5.63e+00	7.85e+00	5.35e-02	2.13e+00	8.50e-04	7.81e+00	7.98e+00	7.77e+00	5.17e-02	5.82e-02	5.05e-02	2.00e+00	2.81e+00	1.58e+00	6.96e-04	1.39e-03	4.64e-04
chr1	152800194	152836991	ENSMUSG00000026480	0.4698	+	Ncf2	protein_coding	6.18e-13	5.40e-11	-5.87e+00	7.98e+00	5.22e-02	1.58e+00	6.90e-04	7.94e+00	8.09e+00	7.91e+00	5.07e-02	5.63e-02	4.97e-02	3.17e+00	1.58e+00	0.00e+00	1.66e-03	4.14e-04	0.00e+00
chr2	69871412	69872202	ENSMUSG00000089902	0.3312	-	Gm13625	processed_transcript	6.94e-13	6.03e-11	-5.09e+00	9.09e+00	4.34e-01	3.96e+00	1.20e-02	8.95e+00	9.16e+00	9.14e+00	3.95e-01	4.55e-01	4.51e-01	3.46e+00	4.25e+00	4.17e+00	7.97e-03	1.44e-02	1.36e-02
chr6	113326972	113335068	ENSMUSG00000030271	0.4803	+	Ogg1	protein_coding	7.11e-13	6.15e-11	-5.01e+00	9.40e+00	8.57e-02	4.35e+00	2.54e-03	9.63e+00	9.08e+00	9.50e+00	9.92e-02	6.77e-02	9.02e-02	3.81e+00	4.39e+00	4.86e+00	1.63e-03	2.50e-03	3.50e-03
chr11	48806404	48817353	ENSMUSG00000040365	0.4889	-	Trim41	protein_coding	1.18e-12	1.01e-10	-4.81e+00	1.14e+01	5.83e-01	6.62e+00	2.05e-02	1.17e+01	1.13e+01	1.13e+01	6.91e-01	5.17e-01	5.39e-01	6.57e+00	6.60e+00	6.70e+00	1.98e-02	2.02e-02	2.17e-02
chr12	98786604	98901484	ENSMUSG00000051166	0.3893	-	Eml5	protein_coding	1.23e-12	1.05e-10	-6.76e+00	6.74e+00	2.15e-02	0.00e+00	0.00e+00	6.77e+00	7.07e+00	6.38e+00	2.16e-02	2.66e-02	1.64e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	69871198	69885615	ENSMUSG00000051730	0.4007	-	Mettl5	protein_coding	1.27e-12	1.08e-10	-4.87e+00	1.00e+01	2.25e-01	5.11e+00	7.51e-03	9.91e+00	1.01e+01	1.01e+01	2.04e-01	2.40e-01	2.33e-01	4.46e+00	5.52e+00	5.36e+00	4.46e-03	9.57e-03	8.50e-03
chr4	124855239	124862171	ENSMUSG00000042763	0.5092	-	Maneal	protein_coding	1.65e-12	1.40e-10	-6.83e+00	6.83e+00	4.32e-02	0.00e+00	0.00e+00	6.73e+00	6.75e+00	7.00e+00	4.01e-02	4.09e-02	4.85e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr16	4036942	4040024	ENSMUSG00000005980	0.5102	+	Dnase1	protein_coding	2.24e-12	1.90e-10	-6.82e+00	6.76e+00	2.00e-02	0.00e+00	0.00e+00	6.38e+00	7.34e+00	6.57e+00	1.46e-02	2.87e-02	1.67e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	94406151	94411682	ENSMUSG00000045464	0.4369	+	2810002D19Rik	processed_transcript	2.36e-12	1.99e-10	-5.05e+00	8.46e+00	2.81e-01	3.36e+00	7.71e-03	8.64e+00	8.42e+00	8.33e+00	3.17e-01	2.73e-01	2.55e-01	3.17e+00	3.00e+00	3.91e+00	6.38e-03	5.58e-03	1.12e-02
chr2	164839518	164857711	ENSMUSG00000017754	0.4954	-	Pltp	protein_coding	2.40e-12	2.01e-10	-4.79e+00	9.95e+00	1.87e-01	5.11e+00	6.55e-03	1.01e+01	9.66e+00	1.01e+01	2.08e-01	1.52e-01	2.01e-01	5.04e+00	4.64e+00	5.64e+00	5.99e-03	4.49e-03	9.17e-03
chr16	18348182	18407076	ENSMUSG00000000325	0.5036	+	Arvcf	protein_coding	2.67e-12	2.22e-10	-4.99e+00	8.65e+00	3.47e-02	3.63e+00	1.01e-03	8.81e+00	8.62e+00	8.53e+00	3.86e-02	3.39e-02	3.17e-02	3.91e+00	3.17e+00	3.81e+00	1.21e-03	6.90e-04	1.12e-03
chr12	71111428	71123222	ENSMUSG00000021078	0.4487	+	Tomm20l	protein_coding	3.34e-12	2.77e-10	-6.67e+00	6.66e+00	7.33e-02	0.00e+00	0.00e+00	6.41e+00	6.82e+00	6.74e+00	6.11e-02	8.15e-02	7.71e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	59905126	59915056	ENSMUSG00000028386	0.4801	-	Slc46a2	protein_coding	3.43e-12	2.83e-10	-6.73e+00	6.72e+00	4.19e-02	0.00e+00	0.00e+00	6.85e+00	6.43e+00	6.88e+00	4.54e-02	3.38e-02	4.66e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00

Download the DEG result list for ML_vs_MI.
Download the whole result list for ML_vs_MI.

DEG table for the contrast CL_vs_CI

The following table presents the top 10% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast CL_vs_CI. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right.

chromosome	start	end	gene_id	gc_content	strand	gene_name	biotype	p-value_deseq	FDR_deseq	log2_normalized_fold_change_CL_vs_CI	log2_normalized_mean_counts_CL	rpgm_normalized_mean_counts_CL	log2_normalized_mean_counts_CI	rpgm_normalized_mean_counts_CI	log2_normalized_counts_GK3R164-CL1	log2_normalized_counts_GK3R165-CL2	log2_normalized_counts_GK3R166-CL3	rpgm_normalized_counts_GK3R164-CL1	rpgm_normalized_counts_GK3R165-CL2	rpgm_normalized_counts_GK3R166-CL3	log2_normalized_counts_GK3R149_CI1	log2_normalized_counts_GK3R150_CI2	log2_normalized_counts_GK3R151_CI3r	rpgm_normalized_counts_GK3R149_CI1	rpgm_normalized_counts_GK3R150_CI2	rpgm_normalized_counts_GK3R151_CI3r
chr10	81182605	81183849	ENSMUSG00000053603	0.5293	-	4930442H23Rik	protein_coding	2.17e-40	3.95e-36	-1.44e+01	1.44e+01	1.69e+01	0.00e+00	0.00e+00	1.45e+01	1.47e+01	1.39e+01	1.85e+01	2.03e+01	1.20e+01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	37714190	37724490	ENSMUSG00000058174	0.4589	-	Gm5148	protein_coding	2.10e-37	1.54e-33	-1.34e+01	1.34e+01	3.75e+00	0.00e+00	0.00e+00	1.37e+01	1.34e+01	1.31e+01	4.60e+00	3.70e+00	2.93e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	29376671	29388468	ENSMUSG00000058831	0.4835	-	Opn1sw	protein_coding	2.55e-37	1.54e-33	-1.34e+01	1.34e+01	2.18e+00	0.00e+00	0.00e+00	1.34e+01	1.36e+01	1.32e+01	2.12e+00	2.51e+00	1.91e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	60302748	60696490	ENSMUSG00000012819	0.5079	-	Cdh23	protein_coding	8.66e-35	3.93e-31	-1.25e+01	1.24e+01	7.08e-01	0.00e+00	0.00e+00	1.17e+01	1.28e+01	1.28e+01	4.05e-01	8.53e-01	8.66e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	72953236	72957247	ENSMUSG00000097569	0.4743	+	Gm26640	lincRNA	5.75e-32	2.09e-28	-1.17e+01	1.16e+01	2.65e+00	0.00e+00	0.00e+00	1.22e+01	1.16e+01	1.12e+01	3.62e+00	2.45e+00	1.87e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	28881422	28893563	ENSMUSG00000054083	0.5460	+	Capn12	protein_coding	5.24e-31	1.59e-27	-1.15e+01	1.15e+01	9.22e-01	0.00e+00	0.00e+00	1.12e+01	1.14e+01	1.18e+01	7.59e-01	8.75e-01	1.13e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	127982570	127984881	ENSMUSG00000097751	0.4010	-	Gm26690	lincRNA	9.20e-30	2.39e-26	-1.11e+01	1.10e+01	1.78e+00	0.00e+00	0.00e+00	1.17e+01	1.09e+01	1.04e+01	2.71e+00	1.57e+00	1.06e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	120955351	121277197	ENSMUSG00000040936	0.4889	-	Ulk4	protein_coding	6.44e-29	1.46e-25	-1.00e+01	1.18e+01	7.81e-02	1.44e+00	5.16e-05	1.18e+01	1.14e+01	1.20e+01	8.03e-02	6.17e-02	9.21e-02	2.00e+00	0.00e+00	2.32e+00	6.63e-05	0.00e+00	8.84e-05
chr9	115909455	116076176	ENSMUSG00000056880	0.4482	+	Gadl1	protein_coding	9.27e-29	1.87e-25	-1.04e+01	1.12e+01	4.84e-01	5.28e-01	1.39e-04	1.14e+01	1.12e+01	1.09e+01	5.80e-01	4.78e-01	3.94e-01	0.00e+00	0.00e+00	1.58e+00	0.00e+00	0.00e+00	4.18e-04
chr8	71624417	71671757	ENSMUSG00000034799	0.5418	-	Unc13a	protein_coding	1.34e-28	2.43e-25	-1.01e+01	1.14e+01	1.57e-01	7.74e-01	7.92e-05	1.13e+01	1.12e+01	1.16e+01	1.45e-01	1.42e-01	1.84e-01	0.00e+00	2.32e+00	0.00e+00	0.00e+00	2.38e-04	0.00e+00
chr19	9985174	10001633	ENSMUSG00000037418	0.4892	-	Best1	protein_coding	6.51e-28	1.08e-24	-1.02e+01	1.09e+01	7.25e-01	5.28e-01	2.45e-04	1.08e+01	1.12e+01	1.09e+01	6.36e-01	8.41e-01	6.98e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	7.35e-04	0.00e+00
chr11	29743048	30026033	ENSMUSG00000044072	0.4117	-	Eml6	protein_coding	1.81e-27	2.74e-24	-1.06e+01	1.06e+01	9.06e-02	0.00e+00	0.00e+00	1.07e+01	1.03e+01	1.07e+01	9.55e-02	7.59e-02	1.00e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	13172022	13200620	ENSMUSG00000038515	0.5033	-	Grtp1	protein_coding	2.77e-27	3.87e-24	-9.22e+00	1.20e+01	5.08e-01	1.39e+00	7.21e-04	1.20e+01	1.19e+01	1.20e+01	5.16e-01	5.01e-01	5.06e-01	0.00e+00	4.17e+00	0.00e+00	0.00e+00	2.16e-03	0.00e+00
chr11	50174444	50200115	ENSMUSG00000020381	0.4711	+	3010026O09Rik	protein_coding	3.31e-27	4.29e-24	-9.48e+00	1.15e+01	4.73e-01	1.11e+00	4.99e-04	1.16e+01	1.16e+01	1.12e+01	4.99e-01	5.20e-01	4.00e-01	0.00e+00	0.00e+00	3.32e+00	0.00e+00	0.00e+00	1.50e-03
chr12	17284721	17329359	ENSMUSG00000020566	0.4798	-	Atp6v1c2	protein_coding	5.14e-27	6.18e-24	-1.05e+01	1.05e+01	1.33e-01	0.00e+00	0.00e+00	1.06e+01	1.05e+01	1.03e+01	1.44e-01	1.35e-01	1.20e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	29170210	29173976	ENSMUSG00000031493	0.6010	+	Ggn	protein_coding	5.44e-27	6.18e-24	-9.54e+00	1.12e+01	9.35e-01	1.72e+00	8.80e-04	1.17e+01	1.12e+01	1.07e+01	1.28e+00	9.10e-01	6.18e-01	2.00e+00	1.58e+00	1.58e+00	1.13e-03	7.54e-04	7.54e-04
chr6	115774538	115805557	ENSMUSG00000030319	0.5026	+	Cand2	protein_coding	8.36e-27	8.94e-24	-9.37e+00	1.13e+01	8.98e-01	1.53e+00	1.02e-03	1.17e+01	1.15e+01	1.08e+01	1.09e+00	1.01e+00	5.97e-01	0.00e+00	3.00e+00	1.58e+00	0.00e+00	2.38e-03	6.79e-04
chr1	74278550	74279624	ENSMUSG00000064272	0.6130	+	Gpbar1	protein_coding	1.08e-26	1.09e-23	-9.49e+00	1.12e+01	2.32e+00	1.00e+00	2.26e-03	1.13e+01	1.07e+01	1.16e+01	2.38e+00	1.59e+00	3.00e+00	0.00e+00	0.00e+00	3.00e+00	0.00e+00	0.00e+00	6.77e-03
chr17	39847113	39848035	ENSMUSG00000105361	0.5439	-	AY036118	lincRNA	5.38e-26	5.14e-23	-1.02e+01	1.01e+01	9.30e-01	0.00e+00	0.00e+00	9.34e+00	1.07e+01	1.01e+01	5.14e-01	1.37e+00	9.02e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr18	36735068	36742391	ENSMUSG00000006850	0.4870	+	Tmco6	protein_coding	1.20e-25	1.09e-22	-9.67e+00	1.04e+01	9.14e-01	5.28e-01	4.50e-04	1.06e+01	1.02e+01	1.04e+01	1.02e+00	7.89e-01	9.37e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.35e-03	0.00e+00
chr17	35062693	35066184	ENSMUSG00000073414	0.5284	-	G6b	protein_coding	2.16e-25	1.87e-22	-1.01e+01	9.94e+00	3.66e-01	0.00e+00	0.00e+00	1.07e+01	9.73e+00	9.38e+00	5.76e-01	2.94e-01	2.30e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	70868669	70934324	ENSMUSG00000047692	0.4390	+	4930533K18Rik	protein_coding	2.49e-25	2.06e-22	-1.00e+01	1.00e+01	2.63e-01	0.00e+00	0.00e+00	9.79e+00	1.01e+01	1.02e+01	2.21e-01	2.78e-01	2.89e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	121439059	121456781	ENSMUSG00000046110	0.4888	-	Serinc4	protein_coding	2.96e-25	2.34e-22	-9.29e+00	1.07e+01	8.62e-02	1.11e+00	8.60e-05	1.05e+01	1.08e+01	1.08e+01	7.73e-02	9.08e-02	9.07e-02	1.00e+00	2.32e+00	0.00e+00	5.16e-05	2.06e-04	0.00e+00
chr7	143069153	143094642	ENSMUSG00000009246	0.5298	-	Trpm5	protein_coding	4.47e-25	3.39e-22	-9.98e+00	9.87e+00	8.61e-02	0.00e+00	0.00e+00	1.06e+01	9.77e+00	9.23e+00	1.33e-01	7.45e-02	5.13e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	46711998	46715700	ENSMUSG00000040026	0.4807	-	Saa3	protein_coding	4.73e-25	3.44e-22	8.56e+00	5.32e+00	9.58e-03	1.40e+01	3.71e+00	4.39e+00	5.43e+00	6.15e+00	4.36e-03	9.15e-03	1.52e-02	1.41e+01	1.43e+01	1.38e+01	3.78e+00	4.25e+00	3.10e+00
chr5	113842601	113843116	ENSMUSG00000090458	0.5271	+	Gm17122	antisense	1.03e-24	7.19e-22	-9.90e+00	9.89e+00	7.63e-01	0.00e+00	0.00e+00	1.02e+01	9.82e+00	9.68e+00	9.15e-01	7.22e-01	6.53e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	3567990	3584939	ENSMUSG00000065952	0.4553	+	C330021F23Rik	protein_coding	1.23e-24	8.30e-22	-9.91e+00	9.86e+00	2.16e-01	0.00e+00	0.00e+00	9.48e+00	9.71e+00	1.04e+01	1.60e-01	1.88e-01	2.99e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	140898945	140900446	ENSMUSG00000025488	0.5360	-	Cox8b	protein_coding	2.12e-24	1.38e-21	-9.79e+00	9.76e+00	6.82e-01	0.00e+00	0.00e+00	9.87e+00	1.01e+01	9.36e+00	7.22e-01	8.18e-01	5.05e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	76324891	76334153	ENSMUSG00000021057	0.4478	+	Akap5	protein_coding	5.70e-24	3.57e-21	-8.29e+00	1.16e+01	6.22e-01	3.36e+00	1.81e-03	1.11e+01	1.24e+01	1.11e+01	4.07e-01	1.04e+00	4.24e-01	3.70e+00	2.81e+00	3.58e+00	2.24e-03	1.12e-03	2.05e-03
chr9	58652850	58743964	ENSMUSG00000074269	0.4395	-	Rec114	protein_coding	2.02e-23	1.22e-20	-8.65e+00	1.04e+01	5.16e-01	1.44e+00	8.97e-04	1.05e+01	1.02e+01	1.04e+01	5.68e-01	4.48e-01	5.32e-01	2.00e+00	2.32e+00	0.00e+00	1.15e-03	1.54e-03	0.00e+00
chr9	66065176	66069719	ENSMUSG00000039452	0.5427	-	Snx22	protein_coding	3.88e-23	2.28e-20	-9.05e+00	9.75e+00	1.99e-01	5.28e-01	1.50e-04	9.26e+00	1.00e+01	9.93e+00	1.39e-01	2.39e-01	2.19e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	4.51e-04	0.00e+00
chr7	139579376	139582797	ENSMUSG00000041309	0.5786	-	Nkx6-2	protein_coding	8.29e-23	4.71e-20	-9.44e+00	9.43e+00	2.27e-01	0.00e+00	0.00e+00	9.61e+00	9.51e+00	9.17e+00	2.55e-01	2.38e-01	1.88e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	102393403	102402555	ENSMUSG00000006575	0.5573	+	Rundc3a	protein_coding	1.04e-22	5.70e-20	-9.40e+00	9.40e+00	1.16e-01	0.00e+00	0.00e+00	9.29e+00	9.35e+00	9.55e+00	1.08e-01	1.13e-01	1.29e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	144264526	144358112	ENSMUSG00000038859	0.4482	-	Baiap2l1	protein_coding	1.09e-22	5.82e-20	-8.16e+00	1.05e+01	3.87e-01	1.72e+00	1.10e-03	1.11e+01	1.06e+01	9.82e+00	5.46e-01	3.84e-01	2.30e-01	0.00e+00	1.58e+00	3.58e+00	0.00e+00	5.08e-04	2.79e-03
chr15	100621342	100636865	ENSMUSG00000053559	0.4926	-	Smagp	protein_coding	1.57e-22	8.17e-20	-9.38e+00	9.36e+00	3.77e-01	0.00e+00	0.00e+00	9.12e+00	9.34e+00	9.62e+00	3.16e-01	3.67e-01	4.47e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	156872457	156887192	ENSMUSG00000027636	0.5173	-	Sla2	protein_coding	1.93e-22	9.76e-20	-9.35e+00	9.35e+00	2.02e-01	0.00e+00	0.00e+00	9.44e+00	9.27e+00	9.34e+00	2.15e-01	1.91e-01	2.00e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	45906497	45929726	ENSMUSG00000035382	0.4761	+	Pcsk7	protein_coding	2.34e-22	1.15e-19	-7.85e+00	1.33e+01	7.26e-01	5.22e+00	3.08e-03	1.34e+01	1.32e+01	1.33e+01	7.88e-01	6.66e-01	7.25e-01	6.13e+00	5.52e+00	4.00e+00	4.94e-03	3.22e-03	1.07e-03
chr1	75450436	75474343	ENSMUSG00000033007	0.5347	+	Asic4	protein_coding	4.31e-22	2.06e-19	-9.24e+00	9.23e+00	3.06e-01	0.00e+00	0.00e+00	9.23e+00	9.33e+00	9.14e+00	3.05e-01	3.27e-01	2.87e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	107558809	107568415	ENSMUSG00000097099	0.4994	-	Gm9917	antisense	5.86e-22	2.73e-19	-9.23e+00	9.21e+00	1.19e-01	0.00e+00	0.00e+00	9.53e+00	9.08e+00	9.02e+00	1.47e-01	1.08e-01	1.03e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	80879720	80899441	ENSMUSG00000059406	0.5335	+	Tmprss9	protein_coding	8.61e-22	3.91e-19	-9.30e+00	9.01e+00	4.64e-01	0.00e+00	0.00e+00	8.29e+00	8.48e+00	1.03e+01	2.30e-01	2.63e-01	9.01e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	9908638	9942085	ENSMUSG00000046101	0.3985	+	Mcmdc2	protein_coding	1.07e-21	4.74e-19	-7.85e+00	1.04e+01	1.94e-01	1.33e+00	6.98e-04	1.06e+01	1.05e+01	1.02e+01	2.20e-01	1.96e-01	1.66e-01	0.00e+00	4.00e+00	0.00e+00	0.00e+00	2.10e-03	0.00e+00
chr7	16455721	16477728	ENSMUSG00000001988	0.5276	-	Npas1	protein_coding	1.74e-21	7.53e-19	-9.10e+00	9.08e+00	2.09e-01	0.00e+00	0.00e+00	8.98e+00	9.41e+00	8.87e+00	1.92e-01	2.59e-01	1.78e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	25218745	25222280	ENSMUSG00000026969	0.4938	+	Fam166a	protein_coding	2.16e-21	9.12e-19	-9.04e+00	8.95e+00	3.86e-01	0.00e+00	0.00e+00	9.57e+00	9.02e+00	8.25e+00	5.56e-01	3.79e-01	2.23e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69851005	69858730	ENSMUSG00000001583	0.5286	-	Tnk1	protein_coding	2.78e-21	1.15e-18	-9.07e+00	9.05e+00	9.08e-02	0.00e+00	0.00e+00	8.70e+00	9.16e+00	9.29e+00	7.02e-02	9.67e-02	1.05e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	95897768	95904691	ENSMUSG00000038526	0.5042	-	Car14	protein_coding	3.01e-21	1.19e-18	-9.07e+00	9.07e+00	9.93e-02	0.00e+00	0.00e+00	9.17e+00	9.06e+00	8.97e+00	1.07e-01	9.88e-02	9.25e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	34613349	34615971	ENSMUSG00000015467	0.5791	-	Egfl8	protein_coding	3.02e-21	1.19e-18	-9.04e+00	8.98e+00	1.26e-01	0.00e+00	0.00e+00	9.12e+00	9.43e+00	8.40e+00	1.33e-01	1.64e-01	8.02e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	169969409	169972396	ENSMUSG00000097503	0.4060	+	3110045C21Rik	antisense	3.21e-21	1.24e-18	-9.10e+00	9.08e+00	4.28e-01	0.00e+00	0.00e+00	8.85e+00	9.40e+00	8.99e+00	3.60e-01	5.27e-01	3.95e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	38997476	39006168	ENSMUSG00000035295	0.5293	+	Wdr38	protein_coding	3.52e-21	1.33e-18	-9.15e+00	9.12e+00	1.08e-01	0.00e+00	0.00e+00	9.40e+00	8.68e+00	9.29e+00	1.28e-01	7.71e-02	1.18e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	78176711	78181909	ENSMUSG00000019437	0.5266	+	Tlcd1	protein_coding	6.75e-21	2.50e-18	-7.54e+00	1.09e+01	5.24e-01	3.27e+00	2.53e-03	1.07e+01	1.08e+01	1.11e+01	4.74e-01	4.99e-01	6.00e-01	3.00e+00	3.81e+00	3.00e+00	1.97e-03	3.66e-03	1.97e-03
chr6	127122966	127126155	ENSMUSG00000107379	0.4564	+	Gm43126	antisense	1.08e-20	3.91e-18	-8.98e+00	8.89e+00	4.02e-01	0.00e+00	0.00e+00	8.32e+00	8.77e+00	9.57e+00	2.54e-01	3.48e-01	6.04e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	90104132	90212048	ENSMUSG00000027939	0.4384	+	Nup210l	protein_coding	1.71e-20	6.10e-18	-8.30e+00	9.52e+00	5.73e-01	7.74e-01	1.04e-03	9.61e+00	9.50e+00	9.46e+00	6.09e-01	5.61e-01	5.47e-01	2.32e+00	0.00e+00	0.00e+00	3.11e-03	0.00e+00	0.00e+00
chr2	155278243	155357430	ENSMUSG00000038383	0.4369	-	Pigu	protein_coding	1.90e-20	6.65e-18	-7.37e+00	1.07e+01	4.21e-01	3.31e+00	2.30e-03	1.03e+01	1.11e+01	1.07e+01	3.11e-01	5.51e-01	4.01e-01	2.81e+00	3.81e+00	3.32e+00	1.48e-03	3.21e-03	2.22e-03
chr11	101279012	101296317	ENSMUSG00000078653	0.4580	+	Cntd1	protein_coding	1.99e-20	6.82e-18	-8.70e+00	9.11e+00	1.13e-01	3.33e-01	6.83e-05	9.27e+00	9.14e+00	8.91e+00	1.26e-01	1.16e-01	9.81e-02	1.00e+00	0.00e+00	0.00e+00	2.05e-04	0.00e+00	0.00e+00
chr16	5086291	5132481	ENSMUSG00000039457	0.5103	-	Ppl	protein_coding	3.36e-20	1.13e-17	-8.07e+00	9.19e+00	2.94e-01	7.74e-01	6.27e-04	9.87e+00	9.10e+00	8.61e+00	4.41e-01	2.58e-01	1.83e-01	0.00e+00	2.32e+00	0.00e+00	0.00e+00	1.88e-03	0.00e+00
chr1	92859803	92902906	ENSMUSG00000034212	0.4993	-	Ankmy1	protein_coding	3.55e-20	1.17e-17	-8.40e+00	9.12e+00	1.39e-01	5.28e-01	1.65e-04	8.86e+00	9.38e+00	9.12e+00	1.15e-01	1.64e-01	1.38e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	4.95e-04	0.00e+00
chr5	30888694	30906965	ENSMUSG00000029165	0.4870	+	Agbl5	protein_coding	4.23e-20	1.37e-17	-7.50e+00	9.87e+00	8.01e-02	1.88e+00	3.60e-04	1.02e+01	1.01e+01	9.37e+00	9.65e-02	8.86e-02	5.50e-02	0.00e+00	3.32e+00	2.32e+00	0.00e+00	7.48e-04	3.33e-04
chr11	29526408	29545279	ENSMUSG00000020459	0.3929	+	Mtif2	protein_coding	4.41e-20	1.41e-17	-7.08e+00	1.26e+01	7.97e-01	5.49e+00	5.75e-03	1.31e+01	1.25e+01	1.21e+01	1.10e+00	7.22e-01	5.74e-01	5.91e+00	5.39e+00	5.17e+00	7.54e-03	5.24e-03	4.47e-03
chr14	66135039	66152948	ENSMUSG00000022041	0.4905	+	Chrna2	protein_coding	5.44e-20	1.70e-17	-8.31e+00	9.03e+00	1.69e-01	5.28e-01	2.13e-04	8.76e+00	9.01e+00	9.32e+00	1.39e-01	1.65e-01	2.03e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	6.40e-04	0.00e+00
chr1	172320501	172329318	ENSMUSG00000038026	0.5319	-	Kcnj9	protein_coding	8.31e-20	2.56e-17	-8.74e+00	8.73e+00	8.75e-02	0.00e+00	0.00e+00	8.63e+00	8.89e+00	8.68e+00	8.13e-02	9.71e-02	8.42e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr13	3566036	3611108	ENSMUSG00000033799	0.3807	-	Fam208b	protein_coding	9.43e-20	2.85e-17	-7.76e+00	9.32e+00	3.45e-01	1.30e+00	1.06e-03	9.53e+00	9.48e+00	8.96e+00	3.92e-01	3.80e-01	2.64e-01	0.00e+00	1.58e+00	2.32e+00	0.00e+00	1.06e-03	2.13e-03
chr8	84701457	84704715	ENSMUSG00000034041	0.5726	+	Lyl1	protein_coding	1.50e-19	4.47e-17	-8.73e+00	8.73e+00	2.55e-01	0.00e+00	0.00e+00	8.56e+00	8.78e+00	8.84e+00	2.26e-01	2.64e-01	2.76e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	153740349	153745468	ENSMUSG00000026475	0.5045	+	Rgs16	protein_coding	1.53e-19	4.47e-17	7.18e+00	3.55e+00	4.07e-03	9.15e+00	6.42e-01	3.17e+00	4.32e+00	3.17e+00	2.79e-03	6.63e-03	2.79e-03	7.83e+00	7.29e+00	1.23e+01	7.92e-02	5.44e-02	1.79e+00
chr7	27153714	27158668	ENSMUSG00000078787	0.5269	+	Cyp2t4	protein_coding	1.78e-19	5.14e-17	-8.72e+00	8.71e+00	3.10e-01	0.00e+00	0.00e+00	8.86e+00	8.75e+00	8.54e+00	3.41e-01	3.16e-01	2.72e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	44410159	44418569	ENSMUSG00000043923	0.4642	-	Ccdc84	protein_coding	2.07e-19	5.88e-17	-7.24e+00	1.06e+01	3.16e-01	2.48e+00	1.90e-03	1.10e+01	1.08e+01	1.01e+01	4.03e-01	3.36e-01	2.10e-01	4.64e+00	2.81e+00	0.00e+00	4.57e-03	1.14e-03	0.00e+00
chr1	39371492	39478755	ENSMUSG00000003134	0.4730	-	Tbc1d8	protein_coding	2.49e-19	6.95e-17	-7.43e+00	9.50e+00	3.44e-02	1.71e+00	1.54e-04	9.29e+00	9.26e+00	9.97e+00	2.87e-02	2.82e-02	4.62e-02	0.00e+00	2.81e+00	2.32e+00	0.00e+00	2.77e-04	1.84e-04
chr6	125362660	125380793	ENSMUSG00000038167	0.5280	-	Plekhg6	protein_coding	3.20e-19	8.80e-17	-8.62e+00	8.60e+00	2.71e-01	0.00e+00	0.00e+00	8.48e+00	8.38e+00	8.94e+00	2.46e-01	2.28e-01	3.38e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	33810520	33822918	ENSMUSG00000042099	0.4973	+	Kank3	protein_coding	3.54e-19	9.60e-17	-7.33e+00	1.01e+01	5.32e-01	2.15e+00	2.81e-03	9.89e+00	1.02e+01	1.01e+01	4.71e-01	5.86e-01	5.40e-01	3.46e+00	0.00e+00	3.00e+00	4.97e-03	0.00e+00	3.48e-03
chr13	55325168	55329758	ENSMUSG00000021485	0.5450	-	Mxd3	protein_coding	5.44e-19	1.45e-16	-7.25e+00	9.74e+00	4.59e-01	2.44e+00	2.50e-03	9.63e+00	9.64e+00	9.95e+00	4.24e-01	4.28e-01	5.27e-01	2.00e+00	2.32e+00	3.00e+00	1.61e-03	2.14e-03	3.75e-03
chr8	109614517	109674386	ENSMUSG00000048827	0.4630	+	Pkd1l3	protein_coding	7.60e-19	2.00e-16	-8.63e+00	8.54e+00	6.31e-02	0.00e+00	0.00e+00	7.95e+00	8.50e+00	9.18e+00	3.92e-02	5.76e-02	9.23e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	35371546	35931228	ENSMUSG00000037646	0.3916	+	Vps13b	protein_coding	8.87e-19	2.30e-16	-7.06e+00	1.01e+01	4.84e-01	3.01e+00	3.22e-03	1.05e+01	9.87e+00	1.00e+01	6.17e-01	3.92e-01	4.43e-01	3.70e+00	2.32e+00	3.00e+00	5.04e-03	1.68e-03	2.94e-03
chr11	96766802	96768269	ENSMUSG00000085242	0.5293	+	Gm11537	antisense	9.07e-19	2.32e-16	-8.49e+00	8.48e+00	2.85e-01	0.00e+00	0.00e+00	8.57e+00	8.37e+00	8.52e+00	3.01e-01	2.62e-01	2.92e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	88171556	88177785	ENSMUSG00000096935	0.4767	-	1700113A16Rik	antisense	9.37e-19	2.37e-16	-8.54e+00	8.54e+00	1.48e-01	0.00e+00	0.00e+00	8.50e+00	8.46e+00	8.65e+00	1.44e-01	1.40e-01	1.60e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	29953621	29965711	ENSMUSG00000063623	0.4614	+	C230062I16Rik	processed_transcript	1.26e-18	3.14e-16	-6.87e+00	1.08e+01	4.57e-01	3.85e+00	3.66e-03	1.07e+01	1.07e+01	1.10e+01	4.27e-01	4.28e-01	5.18e-01	4.39e+00	3.58e+00	3.58e+00	5.23e-03	2.88e-03	2.88e-03
chr1	10993465	11303681	ENSMUSG00000048960	0.3910	+	Prex2	protein_coding	1.42e-18	3.48e-16	-7.97e+00	8.68e+00	2.25e-02	5.28e-01	3.59e-05	8.37e+00	9.02e+00	8.67e+00	1.78e-02	2.78e-02	2.18e-02	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.08e-04	0.00e+00
chr11	101260567	101277409	ENSMUSG00000035112	0.5101	+	Wnk4	protein_coding	1.80e-18	4.37e-16	-8.49e+00	8.47e+00	1.74e-02	0.00e+00	0.00e+00	8.66e+00	8.69e+00	8.05e+00	1.95e-02	2.00e-02	1.28e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	92853653	92856334	ENSMUSG00000109669	0.5272	-	Gm45472	antisense	2.67e-18	6.39e-16	-8.35e+00	8.31e+00	2.60e-01	0.00e+00	0.00e+00	7.80e+00	8.55e+00	8.58e+00	1.77e-01	2.97e-01	3.05e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	33638056	33645706	ENSMUSG00000032739	0.4912	+	Pram1	protein_coding	3.15e-18	7.44e-16	-7.86e+00	8.56e+00	3.41e-02	5.28e-01	5.90e-05	8.86e+00	8.73e+00	8.08e+00	4.11e-02	3.75e-02	2.38e-02	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.77e-04	0.00e+00
chr17	33630759	33645705	ENSMUSG00000092412	0.4843	+	Gm20507	processed_transcript	3.41e-18	7.94e-16	-7.85e+00	8.55e+00	3.06e-01	5.28e-01	5.32e-04	8.85e+00	8.73e+00	8.08e+00	3.66e-01	3.38e-01	2.15e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.59e-03	0.00e+00
chr2	155611212	155634307	ENSMUSG00000074652	0.5475	+	Myh7b	protein_coding	4.32e-18	9.95e-16	-8.41e+00	8.36e+00	1.24e-01	0.00e+00	0.00e+00	8.02e+00	8.23e+00	8.84e+00	9.47e-02	1.10e-01	1.68e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	101818313	101822726	ENSMUSG00000007946	0.5659	+	Phox2a	protein_coding	4.45e-18	1.01e-15	-8.39e+00	8.39e+00	1.09e-01	0.00e+00	0.00e+00	8.35e+00	8.39e+00	8.44e+00	1.05e-01	1.08e-01	1.12e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	43446462	43454628	ENSMUSG00000028459	0.5155	-	Cd72	protein_coding	4.93e-18	1.11e-15	-8.34e+00	8.27e+00	4.25e-02	0.00e+00	0.00e+00	8.76e+00	8.40e+00	7.65e+00	5.69e-02	4.42e-02	2.63e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	137518548	137527935	ENSMUSG00000029714	0.5839	+	Gigyf1	protein_coding	5.71e-18	1.26e-15	-6.97e+00	9.51e+00	1.59e-01	2.46e+00	1.06e-03	9.05e+00	1.00e+01	9.46e+00	1.12e-01	2.17e-01	1.48e-01	3.00e+00	1.58e+00	2.81e+00	1.48e-03	4.22e-04	1.27e-03
chr11	97160990	97161675	ENSMUSG00000084936	0.3907	+	Gm11583	antisense	5.75e-18	1.26e-15	-8.39e+00	8.30e+00	2.66e-01	0.00e+00	0.00e+00	8.95e+00	8.20e+00	7.73e+00	3.95e-01	2.34e-01	1.68e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	115097689	115098295	ENSMUSG00000072693	0.4168	-	Gm10401	protein_coding	7.03e-18	1.52e-15	-8.39e+00	8.39e+00	2.63e-01	0.00e+00	0.00e+00	8.39e+00	8.54e+00	8.24e+00	2.63e-01	2.90e-01	2.36e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	51584757	51604489	ENSMUSG00000020359	0.4734	+	Phykpl	protein_coding	8.48e-18	1.81e-15	-6.59e+00	1.09e+01	1.31e-01	4.24e+00	1.29e-03	1.06e+01	1.07e+01	1.14e+01	9.87e-02	1.10e-01	1.83e-01	4.75e+00	4.64e+00	3.32e+00	1.71e-03	1.58e-03	5.91e-04
chr2	152962485	153008482	ENSMUSG00000074673	0.4816	+	Ttll9	protein_coding	9.24e-18	1.95e-15	-8.35e+00	8.27e+00	2.04e-02	0.00e+00	0.00e+00	7.86e+00	8.03e+00	8.92e+00	1.45e-02	1.63e-02	3.04e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	101339660	101347939	ENSMUSG00000101925	0.4345	-	Gm28156	antisense	1.41e-17	2.95e-15	-8.45e+00	8.44e+00	2.78e-01	0.00e+00	0.00e+00	8.29e+00	8.48e+00	8.55e+00	2.50e-01	2.85e-01	2.98e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	12923833	12940402	ENSMUSG00000062480	0.4584	-	Acat3	protein_coding	1.57e-17	3.25e-15	-6.62e+00	9.98e+00	4.72e-01	3.01e+00	4.35e-03	1.00e+01	9.78e+00	1.01e+01	4.85e-01	4.10e-01	5.22e-01	2.32e+00	4.39e+00	2.32e+00	1.86e-03	9.32e-03	1.86e-03
chr10	79970715	79977190	ENSMUSG00000035745	0.5865	+	Grin3b	protein_coding	2.31e-17	4.72e-15	-8.09e+00	8.04e+00	1.05e-01	0.00e+00	0.00e+00	7.45e+00	8.42e+00	8.24e+00	6.68e-02	1.31e-01	1.16e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	94674894	94696278	ENSMUSG00000031775	0.5041	-	Pllp	protein_coding	2.40e-17	4.84e-15	-8.26e+00	8.26e+00	1.21e-01	0.00e+00	0.00e+00	8.29e+00	8.21e+00	8.28e+00	1.23e-01	1.17e-01	1.23e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	104794836	104818563	ENSMUSG00000002227	0.4862	-	Mov10	protein_coding	2.51e-17	5.01e-15	-6.28e+00	1.16e+01	1.26e-01	5.35e+00	1.59e-03	1.20e+01	1.16e+01	1.12e+01	1.62e-01	1.22e-01	9.54e-02	5.17e+00	5.52e+00	5.36e+00	1.39e-03	1.79e-03	1.59e-03
chr16	11178176	11192292	ENSMUSG00000096959	0.4570	+	4930509G22Rik	lincRNA	2.54e-17	5.01e-15	-7.40e+00	8.62e+00	3.13e-01	7.74e-01	1.06e-03	8.72e+00	8.62e+00	8.50e+00	3.37e-01	3.13e-01	2.88e-01	0.00e+00	0.00e+00	2.32e+00	0.00e+00	0.00e+00	3.19e-03
chr2	32777381	32784428	ENSMUSG00000038987	0.5155	-	Cfap157	protein_coding	2.66e-17	5.19e-15	-8.26e+00	8.21e+00	1.16e-01	0.00e+00	0.00e+00	8.20e+00	7.79e+00	8.65e+00	1.12e-01	8.38e-02	1.52e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr8	105518755	105523988	ENSMUSG00000031891	0.5481	+	Hsd11b2	protein_coding	2.85e-17	5.51e-15	-7.03e+00	8.89e+00	2.62e-01	1.46e+00	1.46e-03	8.68e+00	8.82e+00	9.16e+00	2.24e-01	2.48e-01	3.14e-01	0.00e+00	2.81e+00	1.58e+00	0.00e+00	3.29e-03	1.10e-03
chr8	106870242	106884566	ENSMUSG00000031910	0.5057	+	Has3	protein_coding	2.97e-17	5.68e-15	-8.19e+00	8.19e+00	4.23e-02	0.00e+00	0.00e+00	8.35e+00	8.16e+00	8.05e+00	4.73e-02	4.13e-02	3.83e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	41769467	41774247	ENSMUSG00000073888	0.5227	-	Ccl27a	protein_coding	5.12e-17	9.68e-15	-6.25e+00	1.10e+01	4.79e-01	4.58e+00	6.05e-03	1.16e+01	1.08e+01	1.05e+01	7.04e-01	3.94e-01	3.39e-01	4.64e+00	5.52e+00	3.58e+00	5.44e-03	1.02e-02	2.49e-03
chr15	78439668	78468634	ENSMUSG00000016942	0.5308	-	Tmprss6	protein_coding	5.67e-17	1.06e-14	-7.69e+00	8.42e+00	1.90e-01	5.28e-01	3.70e-04	8.61e+00	8.21e+00	8.43e+00	2.17e-01	1.64e-01	1.91e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.11e-03	0.00e+00
chr16	58468125	58524243	ENSMUSG00000022747	0.4252	-	St3gal6	protein_coding	8.59e-17	1.59e-14	-8.17e+00	8.17e+00	2.85e-02	0.00e+00	0.00e+00	8.21e+00	8.14e+00	8.17e+00	2.92e-02	2.78e-02	2.84e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	164839518	164857711	ENSMUSG00000017754	0.4954	-	Pltp	protein_coding	9.65e-17	1.77e-14	-6.30e+00	1.01e+01	2.06e-01	3.72e+00	2.43e-03	1.01e+01	1.02e+01	9.94e+00	2.10e-01	2.25e-01	1.84e-01	3.00e+00	4.17e+00	4.00e+00	1.31e-03	3.18e-03	2.81e-03
chr6	119236526	119352407	ENSMUSG00000041460	0.4873	+	Cacna2d4	protein_coding	1.05e-16	1.92e-14	-8.06e+00	8.00e+00	2.15e-02	0.00e+00	0.00e+00	8.34e+00	8.29e+00	7.37e+00	2.61e-02	2.53e-02	1.33e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chrX	151198078	151320152	ENSMUSG00000041245	0.3763	+	Wnk3	protein_coding	1.14e-16	2.05e-14	6.97e+00	2.06e+00	1.50e-04	5.27e+00	2.39e-02	1.58e+00	1.58e+00	3.00e+00	8.19e-05	8.19e-05	2.87e-04	3.46e+00	1.58e+00	1.08e+01	4.09e-04	8.19e-05	7.12e-02
chr5	90891241	90893115	ENSMUSG00000029380	0.4464	+	Cxcl1	protein_coding	1.17e-16	2.08e-14	6.25e+00	7.67e+00	1.12e-01	1.39e+01	8.57e+00	7.30e+00	7.92e+00	7.79e+00	8.50e-02	1.31e-01	1.19e-01	1.39e+01	1.45e+01	1.32e+01	8.38e+00	1.23e+01	5.08e+00
chr2	32925216	32961614	ENSMUSG00000026792	0.5183	-	Lrsam1	protein_coding	1.26e-16	2.23e-14	-6.33e+00	9.56e+00	4.61e-02	2.58e+00	5.18e-04	9.31e+00	8.96e+00	1.04e+01	3.52e-02	2.76e-02	7.55e-02	0.00e+00	4.17e+00	3.58e+00	0.00e+00	9.44e-04	6.11e-04
chr3	28807205	28813985	ENSMUSG00000104444	0.4150	-	Gm33051	antisense	1.64e-16	2.87e-14	-8.19e+00	8.18e+00	2.32e-01	0.00e+00	0.00e+00	7.97e+00	8.23e+00	8.34e+00	1.99e-01	2.38e-01	2.58e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	100228845	100232078	ENSMUSG00000084257	0.4858	-	Gm11597	unprocessed_pseudogene	1.90e-16	3.27e-14	7.39e+00	0.00e+00	0.00e+00	2.99e+00	1.33e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	8.97e+00	0.00e+00	0.00e+00	3.98e-01	0.00e+00
chr12	72101292	72185029	ENSMUSG00000021086	0.4139	-	Ccdc175	protein_coding	1.90e-16	3.27e-14	-8.10e+00	8.10e+00	2.00e-01	0.00e+00	0.00e+00	8.25e+00	8.05e+00	8.00e+00	2.21e-01	1.93e-01	1.86e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	120658731	120670343	ENSMUSG00000030887	0.4401	-	Pdzd9	protein_coding	3.32e-16	5.64e-14	-8.10e+00	8.07e+00	6.98e-02	0.00e+00	0.00e+00	7.98e+00	7.80e+00	8.44e+00	6.41e-02	5.67e-02	8.86e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	113326972	113335068	ENSMUSG00000030271	0.4803	+	Ogg1	protein_coding	4.60e-16	7.74e-14	-6.15e+00	9.61e+00	9.76e-02	2.67e+00	1.25e-03	9.64e+00	9.70e+00	9.48e+00	9.97e-02	1.04e-01	8.93e-02	0.00e+00	4.00e+00	4.00e+00	0.00e+00	1.88e-03	1.88e-03
chr2	69871198	69885615	ENSMUSG00000051730	0.4007	-	Mettl5	protein_coding	6.28e-16	1.05e-13	-6.04e+00	1.02e+01	2.57e-01	4.15e+00	3.68e-03	1.04e+01	1.00e+01	1.02e+01	2.94e-01	2.23e-01	2.54e-01	3.81e+00	4.00e+00	4.64e+00	2.76e-03	3.19e-03	5.10e-03
chr6	42358487	42373268	ENSMUSG00000029859	0.4893	-	Epha1	protein_coding	6.95e-16	1.15e-13	-6.00e+00	1.02e+01	4.21e-01	3.52e+00	6.21e-03	9.96e+00	1.03e+01	1.03e+01	3.57e-01	4.56e-01	4.51e-01	2.32e+00	2.81e+00	5.43e+00	1.43e-03	2.15e-03	1.51e-02
chr5	90759360	90761624	ENSMUSG00000029371	0.4190	+	Cxcl5	protein_coding	7.05e-16	1.15e-13	6.07e+00	7.84e+00	9.95e-02	1.39e+01	6.70e+00	7.36e+00	8.26e+00	7.90e+00	6.89e-02	1.29e-01	1.01e-01	1.38e+01	1.43e+01	1.37e+01	6.04e+00	8.26e+00	5.79e+00
chr8	105932003	105933862	ENSMUSG00000031896	0.5430	-	Ctrl	protein_coding	7.09e-16	1.15e-13	-7.95e+00	7.95e+00	9.65e-02	0.00e+00	0.00e+00	7.98e+00	7.97e+00	7.91e+00	9.80e-02	9.77e-02	9.38e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	143150830	143151630	ENSMUSG00000083047	0.4906	-	Gm14082	processed_pseudogene	8.76e-16	1.40e-13	6.79e+00	3.33e-01	2.66e-04	4.45e+00	1.17e-01	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.97e-04	3.00e+00	8.76e+00	1.58e+00	5.58e-03	3.44e-01	1.59e-03
chr17	25786580	25790513	ENSMUSG00000071202	0.5399	+	Ccdc78	protein_coding	8.77e-16	1.40e-13	-7.96e+00	7.95e+00	1.59e-01	0.00e+00	0.00e+00	7.70e+00	8.02e+00	8.12e+00	1.33e-01	1.66e-01	1.79e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	36090379	36091829	ENSMUSG00000059301	0.4673	+	Gm5434	protein_coding	9.80e-16	1.55e-13	-7.92e+00	7.92e+00	1.35e-01	0.00e+00	0.00e+00	8.01e+00	7.88e+00	7.86e+00	1.44e-01	1.31e-01	1.30e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	119742856	119744110	ENSMUSG00000109404	0.4382	-	Gm19963	processed_pseudogene	1.10e-15	1.72e-13	-7.89e+00	7.88e+00	1.88e-01	0.00e+00	0.00e+00	7.71e+00	7.91e+00	8.02e+00	1.66e-01	1.91e-01	2.07e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	115333239	115341178	ENSMUSG00000029536	0.4571	-	Gatc	protein_coding	1.16e-15	1.79e-13	-6.14e+00	9.55e+00	2.94e-01	3.28e+00	3.78e-03	9.63e+00	9.69e+00	9.32e+00	3.11e-01	3.23e-01	2.49e-01	3.70e+00	2.32e+00	3.81e+00	4.70e-03	1.57e-03	5.09e-03
chr5	24502757	24527202	ENSMUSG00000067724	0.4991	-	Gbx1	protein_coding	1.29e-15	1.98e-13	-7.04e+00	8.23e+00	9.90e-02	7.74e-01	4.32e-04	8.63e+00	7.99e+00	8.07e+00	1.28e-01	8.23e-02	8.68e-02	0.00e+00	2.32e+00	0.00e+00	0.00e+00	1.30e-03	0.00e+00
chr4	43427019	43429134	ENSMUSG00000042788	0.5425	-	Fam166b	protein_coding	1.59e-15	2.42e-13	-7.96e+00	7.94e+00	6.08e-02	0.00e+00	0.00e+00	7.85e+00	7.73e+00	8.24e+00	5.64e-02	5.20e-02	7.39e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	97673031	97674694	ENSMUSG00000090441	0.4189	-	Gm17651	protein_coding	1.61e-15	2.44e-13	-8.08e+00	8.07e+00	2.15e-01	0.00e+00	0.00e+00	7.89e+00	8.12e+00	8.19e+00	1.89e-01	2.22e-01	2.33e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	69913888	69916591	ENSMUSG00000023170	0.5521	+	Gps2	protein_coding	1.75e-15	2.63e-13	-6.16e+00	9.24e+00	2.29e-01	3.07e+00	2.84e-03	8.95e+00	9.16e+00	9.62e+00	1.82e-01	2.12e-01	2.91e-01	2.81e+00	3.58e+00	2.81e+00	2.22e-03	4.07e-03	2.22e-03
chr2	180258540	180273496	ENSMUSG00000038990	0.5294	-	Cables2	protein_coding	1.80e-15	2.69e-13	-5.84e+00	1.06e+01	2.40e-01	4.58e+00	4.04e-03	1.05e+01	1.06e+01	1.08e+01	2.20e-01	2.33e-01	2.66e-01	3.81e+00	5.55e+00	4.39e+00	1.99e-03	7.06e-03	3.07e-03
chr11	102436981	102447682	ENSMUSG00000034685	0.5747	-	Fam171a2	protein_coding	2.08e-15	3.07e-13	-5.76e+00	1.28e+01	1.75e+00	7.01e+00	3.22e-02	1.32e+01	1.29e+01	1.24e+01	2.19e+00	1.78e+00	1.29e+00	6.30e+00	7.13e+00	7.60e+00	1.84e-02	3.28e-02	4.55e-02
chr6	70726435	70726966	ENSMUSG00000076609	0.4925	+	Igkc	IG_C_gene	2.35e-15	3.42e-13	7.71e+00	0.00e+00	0.00e+00	4.03e+00	1.73e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	9.28e+00	0.00e+00	2.81e+00	5.14e-01	0.00e+00	4.97e-03
chr4	101068983	101152370	ENSMUSG00000035275	0.4489	+	Raver2	protein_coding	2.35e-15	3.42e-13	-6.50e+00	8.49e+00	5.12e-02	1.60e+00	4.26e-04	8.39e+00	8.49e+00	8.60e+00	4.75e-02	5.10e-02	5.51e-02	2.00e+00	2.81e+00	0.00e+00	4.26e-04	8.53e-04	0.00e+00
chr2	69871412	69872202	ENSMUSG00000089902	0.3312	-	Gm13625	processed_transcript	2.60e-15	3.75e-13	-6.18e+00	9.23e+00	4.80e-01	3.04e+00	5.85e-03	9.41e+00	9.05e+00	9.22e+00	5.43e-01	4.21e-01	4.75e-01	2.81e+00	3.00e+00	3.32e+00	4.78e-03	5.58e-03	7.18e-03
chrX	134588149	134601125	ENSMUSG00000031266	0.4258	-	Gla	protein_coding	3.36e-15	4.79e-13	-5.84e+00	1.06e+01	3.88e-01	4.66e+00	6.55e-03	1.11e+01	1.06e+01	1.02e+01	5.11e-01	3.73e-01	2.81e-01	5.32e+00	3.58e+00	5.09e+00	9.23e-03	2.60e-03	7.81e-03
chr11	97048691	97051432	ENSMUSG00000085262	0.5255	-	Gm11574	processed_transcript	3.37e-15	4.79e-13	-7.85e+00	7.83e+00	1.83e-01	0.00e+00	0.00e+00	8.09e+00	7.81e+00	7.60e+00	2.16e-01	1.78e-01	1.54e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	83762644	83768326	ENSMUSG00000014747	0.5233	+	Ankrd53	protein_coding	4.09e-15	5.76e-13	-7.71e+00	7.71e+00	8.26e-02	0.00e+00	0.00e+00	7.63e+00	7.83e+00	7.67e+00	7.78e-02	8.97e-02	8.02e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	122323223	122354233	ENSMUSG00000038569	0.4535	-	Rad9b	protein_coding	5.60e-15	7.83e-13	-7.77e+00	7.77e+00	3.38e-02	0.00e+00	0.00e+00	7.73e+00	7.69e+00	7.89e+00	3.27e-02	3.19e-02	3.67e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	86055125	86498896	ENSMUSG00000059602	0.4537	-	Syn3	protein_coding	6.17e-15	8.56e-13	-7.81e+00	7.81e+00	2.04e-02	0.00e+00	0.00e+00	7.73e+00	7.69e+00	8.00e+00	1.92e-02	1.88e-02	2.33e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	5406740	5422847	ENSMUSG00000086938	0.4815	+	4930481A15Rik	antisense	9.03e-15	1.24e-12	-6.08e+00	9.07e+00	1.40e-01	2.93e+00	1.81e-03	9.34e+00	9.00e+00	8.86e+00	1.67e-01	1.32e-01	1.20e-01	3.46e+00	3.00e+00	2.32e+00	2.59e-03	1.81e-03	1.03e-03
chr5	92257659	92278170	ENSMUSG00000029413	0.4622	-	Naaa	protein_coding	1.09e-14	1.50e-12	5.83e+00	5.87e+00	1.18e-02	8.49e+00	6.82e-01	6.00e+00	6.29e+00	5.32e+00	1.25e-02	1.53e-02	7.73e-03	6.48e+00	5.67e+00	1.33e+01	1.74e-02	9.91e-03	2.02e+00
chr9	106463962	106465938	ENSMUSG00000091735	0.6297	-	Gpr62	protein_coding	1.11e-14	1.50e-12	-7.68e+00	7.66e+00	1.21e-01	0.00e+00	0.00e+00	7.35e+00	7.97e+00	7.66e+00	9.60e-02	1.48e-01	1.19e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr10	93540632	93584327	ENSMUSG00000036168	0.4470	+	Ccdc38	protein_coding	1.26e-14	1.70e-12	-6.71e+00	8.29e+00	5.60e-02	1.30e+00	3.58e-04	8.46e+00	8.17e+00	8.23e+00	6.29e-02	5.14e-02	5.36e-02	0.00e+00	2.32e+00	1.58e+00	0.00e+00	7.17e-04	3.58e-04
chr9	108950003	108950541	ENSMUSG00000103754	0.5566	-	Gm37284	TEC	1.35e-14	1.81e-12	-7.63e+00	7.63e+00	1.58e-01	0.00e+00	0.00e+00	7.54e+00	7.65e+00	7.71e+00	1.48e-01	1.59e-01	1.66e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	102497649	102517064	ENSMUSG00000023050	0.4753	-	Map3k12	protein_coding	1.51e-14	2.01e-12	-5.62e+00	1.04e+01	1.83e-01	4.77e+00	3.58e-03	1.05e+01	1.06e+01	1.02e+01	1.86e-01	2.05e-01	1.58e-01	4.75e+00	5.17e+00	4.39e+00	3.45e-03	4.64e-03	2.65e-03
chr15	3280627	3303526	ENSMUSG00000091119	0.3855	-	Ccdc152	protein_coding	2.25e-14	2.97e-12	-7.58e+00	7.53e+00	1.52e-01	0.00e+00	0.00e+00	7.61e+00	7.94e+00	7.03e+00	1.56e-01	1.95e-01	1.04e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	108337089	108338273	ENSMUSG00000104208	0.4160	-	Gm37401	antisense	2.91e-14	3.81e-12	-6.53e+00	8.24e+00	2.44e-01	1.27e+00	1.86e-03	8.36e+00	7.91e+00	8.46e+00	2.62e-01	1.91e-01	2.79e-01	1.00e+00	2.81e+00	0.00e+00	7.97e-04	4.78e-03	0.00e+00
chr3	108555467	108556904	ENSMUSG00000105810	0.4103	+	Gm43435	TEC	3.08e-14	4.00e-12	-7.41e+00	7.80e+00	1.80e-01	3.33e-01	2.66e-04	8.01e+00	7.43e+00	7.96e+00	2.04e-01	1.37e-01	1.98e-01	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	0.00e+00
chr7	45233632	45239115	ENSMUSG00000030798	0.5450	-	Cd37	protein_coding	3.32e-14	4.28e-12	-7.62e+00	7.62e+00	3.99e-02	0.00e+00	0.00e+00	7.71e+00	7.65e+00	7.51e+00	4.23e-02	4.07e-02	3.68e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	118362743	118409273	ENSMUSG00000033253	0.5204	-	Szt2	protein_coding	3.60e-14	4.61e-12	-6.24e+00	8.56e+00	2.70e-02	2.24e+00	2.86e-04	8.63e+00	8.48e+00	8.59e+00	2.82e-02	2.55e-02	2.75e-02	2.81e+00	1.58e+00	2.32e+00	4.29e-04	1.43e-04	2.86e-04
chr12	79130777	79156301	ENSMUSG00000021125	0.4294	+	Arg2	protein_coding	3.79e-14	4.82e-12	-7.11e+00	7.83e+00	1.51e-01	5.28e-01	4.37e-04	8.11e+00	7.88e+00	7.49e+00	1.81e-01	1.54e-01	1.17e-01	0.00e+00	1.58e+00	0.00e+00	0.00e+00	1.31e-03	0.00e+00
chr11	94644996	94653964	ENSMUSG00000039055	0.4822	-	Eme1	protein_coding	4.28e-14	5.40e-12	-7.60e+00	7.60e+00	3.55e-02	0.00e+00	0.00e+00	7.52e+00	7.59e+00	7.69e+00	3.36e-02	3.52e-02	3.78e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	116410077	116461178	ENSMUSG00000025701	0.4476	-	Alox5	protein_coding	5.52e-14	6.92e-12	-7.58e+00	7.58e+00	2.82e-02	0.00e+00	0.00e+00	7.64e+00	7.69e+00	7.41e+00	2.92e-02	3.04e-02	2.50e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr16	18348182	18407076	ENSMUSG00000000325	0.5036	+	Arvcf	protein_coding	5.66e-14	7.04e-12	-5.82e+00	8.99e+00	4.39e-02	2.90e+00	6.90e-04	8.97e+00	8.89e+00	9.11e+00	4.32e-02	4.08e-02	4.76e-02	3.32e+00	3.81e+00	1.58e+00	7.76e-04	1.12e-03	1.73e-04
chr4	116551740	116552627	ENSMUSG00000087299	0.4077	+	Gm12953	antisense	5.98e-14	7.36e-12	-7.51e+00	7.45e+00	1.45e-01	0.00e+00	0.00e+00	8.01e+00	7.29e+00	7.06e+00	2.04e-01	1.24e-01	1.05e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	43566928	43578873	ENSMUSG00000028467	0.5073	-	Gba2	protein_coding	6.00e-14	7.36e-12	-5.85e+00	8.96e+00	9.43e-02	3.11e+00	1.45e-03	8.96e+00	8.94e+00	8.99e+00	9.42e-02	9.29e-02	9.59e-02	3.32e+00	3.00e+00	3.00e+00	1.71e-03	1.33e-03	1.33e-03
chr11	69396519	69398234	ENSMUSG00000045377	0.5606	-	Tmem88	protein_coding	6.60e-14	8.05e-12	-6.72e+00	7.94e+00	1.05e-01	1.06e+00	5.68e-04	7.94e+00	7.77e+00	8.10e+00	1.04e-01	9.29e-02	1.17e-01	0.00e+00	1.58e+00	1.58e+00	0.00e+00	8.52e-04	8.52e-04
chr17	24488783	24508905	ENSMUSG00000033597	0.5544	+	Caskin1	protein_coding	6.75e-14	8.17e-12	-7.45e+00	7.45e+00	5.92e-02	0.00e+00	0.00e+00	7.49e+00	7.51e+00	7.36e+00	6.08e-02	6.15e-02	5.54e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr9	109057933	109059734	ENSMUSG00000049734	0.5766	-	Trex1	protein_coding	7.45e-14	8.97e-12	-5.61e+00	9.50e+00	5.74e-01	3.67e+00	1.10e-02	9.32e+00	9.22e+00	9.97e+00	4.90e-01	4.58e-01	7.74e-01	4.17e+00	4.52e+00	2.32e+00	1.31e-02	1.69e-02	3.08e-03
chr14	46379414	46383608	ENSMUSG00000079261	0.4923	+	Gm15217	protein_coding	7.59e-14	9.08e-12	-6.63e+00	7.99e+00	1.94e-01	1.30e+00	1.32e-03	8.78e+00	8.41e+00	6.77e+00	2.88e-01	2.24e-01	7.11e-02	2.32e+00	1.58e+00	0.00e+00	2.63e-03	1.32e-03	0.00e+00
chr1	172066013	172082795	ENSMUSG00000003458	0.4695	-	Ncstn	protein_coding	8.07e-14	9.59e-12	5.57e+00	5.87e+00	2.83e-03	8.08e+00	1.37e-01	5.83e+00	5.75e+00	6.02e+00	2.75e-03	2.60e-03	3.14e-03	5.46e+00	5.78e+00	1.30e+01	2.11e-03	2.65e-03	4.05e-01
chr11	5058128	5060385	ENSMUSG00000034209	0.5735	+	Rasl10a	protein_coding	1.02e-13	1.21e-11	-7.55e+00	7.55e+00	1.18e-01	0.00e+00	0.00e+00	7.56e+00	7.58e+00	7.50e+00	1.19e-01	1.20e-01	1.14e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr6	125145241	125161782	ENSMUSG00000038271	0.5355	+	Iffo1	protein_coding	1.04e-13	1.22e-11	-5.84e+00	8.43e+00	4.42e-02	2.13e+00	6.59e-04	9.17e+00	7.53e+00	8.58e+00	6.68e-02	2.14e-02	4.44e-02	2.81e+00	0.00e+00	3.58e+00	6.98e-04	0.00e+00	1.28e-03
chr1	85575676	85577295	ENSMUSG00000094127	0.4617	+	G530012D18Rik	protein_coding	1.09e-13	1.27e-11	-7.59e+00	7.53e+00	1.53e-01	0.00e+00	0.00e+00	7.99e+00	7.62e+00	6.98e+00	2.02e-01	1.56e-01	9.97e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	72451638	72489904	ENSMUSG00000040447	0.5254	-	Spns2	protein_coding	1.12e-13	1.30e-11	-7.47e+00	7.43e+00	3.53e-02	0.00e+00	0.00e+00	7.72e+00	7.59e+00	6.99e+00	4.21e-02	3.85e-02	2.53e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr12	85288591	85299358	ENSMUSG00000045064	0.4578	+	Zc2hc1c	protein_coding	1.33e-13	1.52e-11	-5.93e+00	8.59e+00	9.80e-02	2.53e+00	1.35e-03	8.53e+00	8.54e+00	8.72e+00	9.34e-02	9.40e-02	1.07e-01	3.00e+00	3.00e+00	1.58e+00	1.78e-03	1.78e-03	5.08e-04
chr7	45481877	45523632	ENSMUSG00000023467	0.4946	+	Tulp2	protein_coding	1.37e-13	1.57e-11	-7.45e+00	7.44e+00	2.46e-02	0.00e+00	0.00e+00	7.57e+00	7.52e+00	7.25e+00	2.67e-02	2.57e-02	2.13e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	141633456	141655319	ENSMUSG00000048191	0.5300	-	Muc6	protein_coding	1.47e-13	1.67e-11	-7.55e+00	7.55e+00	9.24e-02	0.00e+00	0.00e+00	7.55e+00	7.52e+00	7.58e+00	9.23e-02	9.08e-02	9.42e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	120489406	120492394	ENSMUSG00000086929	0.5490	-	Gm11788	antisense	1.66e-13	1.87e-11	-7.48e+00	7.45e+00	1.41e-01	0.00e+00	0.00e+00	7.81e+00	7.42e+00	7.13e+00	1.78e-01	1.36e-01	1.11e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	129608331	129614257	ENSMUSG00000078552	0.5205	-	Dcdc2b	protein_coding	1.69e-13	1.89e-11	-7.52e+00	7.52e+00	1.10e-01	0.00e+00	0.00e+00	7.52e+00	7.61e+00	7.43e+00	1.10e-01	1.17e-01	1.02e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	32308471	32353338	ENSMUSG00000026825	0.5353	-	Dnm1	protein_coding	1.70e-13	1.90e-11	-5.36e+00	9.36e+00	7.69e-02	3.25e+00	1.76e-03	1.00e+01	9.49e+00	8.58e+00	1.12e-01	7.76e-02	4.13e-02	2.00e+00	2.32e+00	5.43e+00	3.24e-04	4.32e-04	4.53e-03
chr9	21405242	21411720	ENSMUSG00000097665	0.4893	-	Gm16853	antisense	1.91e-13	2.12e-11	-7.60e+00	7.56e+00	1.54e-01	0.00e+00	0.00e+00	7.33e+00	7.28e+00	8.07e+00	1.28e-01	1.23e-01	2.13e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr18	33796327	34007206	ENSMUSG00000024376	0.4489	-	Epb41l4a	protein_coding	2.08e-13	2.29e-11	-6.29e+00	8.28e+00	1.37e-01	1.53e+00	1.32e-03	8.32e+00	8.34e+00	8.19e+00	1.41e-01	1.42e-01	1.28e-01	3.00e+00	1.58e+00	0.00e+00	3.09e-03	8.81e-04	0.00e+00
chr7	122169893	122186207	ENSMUSG00000030866	0.4982	-	Ern2	protein_coding	2.38e-13	2.61e-11	-6.48e+00	7.70e+00	7.72e-02	7.74e-01	4.95e-04	7.91e+00	7.57e+00	7.62e+00	8.87e-02	7.01e-02	7.27e-02	0.00e+00	0.00e+00	2.32e+00	0.00e+00	0.00e+00	1.48e-03
chr11	69655314	69656727	ENSMUSG00000041287	0.5750	+	Sox15	protein_coding	2.59e-13	2.82e-11	-7.38e+00	7.32e+00	1.21e-01	0.00e+00	0.00e+00	7.75e+00	7.46e+00	6.74e+00	1.57e-01	1.29e-01	7.79e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	45026906	45046614	ENSMUSG00000074818	0.5288	-	Pdzd7	protein_coding	2.61e-13	2.82e-11	-7.55e+00	7.53e+00	9.48e-02	0.00e+00	0.00e+00	7.26e+00	7.65e+00	7.69e+00	7.74e-02	1.02e-01	1.05e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr2	26916367	26920183	ENSMUSG00000014873	0.5258	+	Surf2	protein_coding	3.30e-13	3.55e-11	-5.23e+00	1.07e+01	1.02e+00	5.43e+00	2.67e-02	1.09e+01	1.06e+01	1.05e+01	1.19e+00	9.59e-01	9.16e-01	5.83e+00	5.46e+00	5.00e+00	3.45e-02	2.65e-02	1.91e-02
chr16	56477846	56690128	ENSMUSG00000035258	0.3922	+	Abi3bp	protein_coding	3.35e-13	3.58e-11	-7.47e+00	7.46e+00	7.57e-02	0.00e+00	0.00e+00	7.38e+00	7.32e+00	7.69e+00	7.07e-02	6.82e-02	8.83e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	114289166	114365357	ENSMUSG00000066952	0.4917	+	Myo1h	protein_coding	3.81e-13	4.05e-11	-6.27e+00	7.99e+00	4.83e-02	1.64e+00	4.38e-04	7.69e+00	8.00e+00	8.29e+00	3.85e-02	4.79e-02	5.84e-02	1.00e+00	2.32e+00	1.58e+00	1.88e-04	7.51e-04	3.76e-04
chr17	25242659	25256364	ENSMUSG00000047507	0.5719	-	Baiap3	protein_coding	3.89e-13	4.11e-11	-7.45e+00	7.29e+00	2.90e-02	0.00e+00	0.00e+00	8.12e+00	7.32e+00	6.43e+00	4.62e-02	2.65e-02	1.42e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	90903871	90905938	ENSMUSG00000058427	0.4507	+	Cxcl2	protein_coding	3.96e-13	4.16e-11	5.29e+00	3.31e+00	5.65e-03	9.36e+00	2.35e-01	2.00e+00	2.58e+00	5.36e+00	1.06e-03	1.77e-03	1.41e-02	9.62e+00	9.47e+00	8.98e+00	2.77e-01	2.50e-01	1.78e-01
chr2	94406151	94411682	ENSMUSG00000045464	0.4369	+	2810002D19Rik	processed_transcript	4.25e-13	4.44e-11	-5.64e+00	8.60e+00	3.57e-01	3.11e+00	6.38e-03	8.40e+00	7.77e+00	9.63e+00	2.68e-01	1.73e-01	6.30e-01	3.70e+00	2.81e+00	2.81e+00	9.57e-03	4.78e-03	4.78e-03
chr19	4861223	4877909	ENSMUSG00000006457	0.5070	-	Actn3	protein_coding	4.38e-13	4.55e-11	-5.66e+00	8.67e+00	3.42e-01	2.95e+00	6.06e-03	7.81e+00	8.51e+00	9.69e+00	1.63e-01	2.64e-01	6.00e-01	3.46e+00	3.81e+00	1.58e+00	7.27e-03	9.45e-03	1.45e-03
chr19	5845623	5851388	ENSMUSG00000043488	0.5309	+	Frmd8os	antisense	4.61e-13	4.76e-11	-7.34e+00	7.34e+00	1.27e-01	0.00e+00	0.00e+00	7.52e+00	7.20e+00	7.29e+00	1.43e-01	1.15e-01	1.23e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	82057823	82062955	ENSMUSG00000020676	0.4282	+	Ccl11	protein_coding	4.68e-13	4.80e-11	5.80e+00	1.88e+00	2.28e-03	8.18e+00	1.56e-01	2.32e+00	3.32e+00	0.00e+00	2.11e-03	4.74e-03	0.00e+00	8.30e+00	8.53e+00	7.70e+00	1.66e-01	1.94e-01	1.09e-01
chr4	126150602	126163491	ENSMUSG00000073758	0.5092	-	Sh3d21	protein_coding	4.71e-13	4.80e-11	-6.50e+00	7.71e+00	7.99e-02	7.74e-01	5.07e-04	7.46e+00	7.85e+00	7.83e+00	6.65e-02	8.70e-02	8.63e-02	0.00e+00	2.32e+00	0.00e+00	0.00e+00	1.52e-03	0.00e+00
chr5	48389502	49524907	ENSMUSG00000029088	0.3778	-	Kcnip4	protein_coding	5.07e-13	5.15e-11	-7.38e+00	7.22e+00	4.23e-02	0.00e+00	0.00e+00	8.02e+00	7.32e+00	6.32e+00	6.62e-02	4.06e-02	2.02e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr7	83642825	83745726	ENSMUSG00000001741	0.4512	-	Il16	protein_coding	5.47e-13	5.53e-11	-6.25e+00	7.81e+00	1.43e-02	9.36e-01	1.26e-04	8.08e+00	7.91e+00	7.43e+00	1.71e-02	1.52e-02	1.08e-02	0.00e+00	0.00e+00	2.81e+00	0.00e+00	0.00e+00	3.79e-04
chr1	181576559	181815774	ENSMUSG00000047369	0.4257	+	Dnah14	protein_coding	6.00e-13	6.02e-11	-7.13e+00	7.54e+00	2.07e-02	3.33e-01	3.70e-05	7.71e+00	7.32e+00	7.59e+00	2.31e-02	1.77e-02	2.13e-02	1.00e+00	0.00e+00	0.00e+00	1.11e-04	0.00e+00	0.00e+00
chr2	32384633	32388252	ENSMUSG00000026822	0.5470	-	Lcn2	protein_coding	7.69e-13	7.64e-11	6.59e+00	5.28e-01	1.27e-04	7.25e+00	3.05e-02	1.58e+00	0.00e+00	0.00e+00	3.81e-04	0.00e+00	0.00e+00	7.83e+00	6.66e+00	7.28e+00	4.31e-02	1.91e-02	2.93e-02
chr2	118388618	118475234	ENSMUSG00000005102	0.4479	+	Eif2ak4	protein_coding	7.69e-13	7.64e-11	-5.17e+00	9.69e+00	1.39e-01	4.27e+00	3.71e-03	9.56e+00	9.90e+00	9.60e+00	1.27e-01	1.60e-01	1.30e-01	3.81e+00	3.58e+00	5.43e+00	2.19e-03	1.85e-03	7.08e-03
chr3	95236920	95241598	ENSMUSG00000068860	0.5012	-	Gm128	protein_coding	7.76e-13	7.66e-11	-7.39e+00	7.36e+00	1.08e-01	0.00e+00	0.00e+00	7.08e+00	7.23e+00	7.76e+00	8.68e-02	9.66e-02	1.40e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	26195999	26199087	ENSMUSG00000024184	0.5458	-	Pdia2	protein_coding	8.28e-13	8.13e-11	-7.38e+00	7.37e+00	6.38e-02	0.00e+00	0.00e+00	7.11e+00	7.44e+00	7.55e+00	5.29e-02	6.68e-02	7.18e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr14	55618037	55625395	ENSMUSG00000002324	0.5205	+	Rec8	protein_coding	8.37e-13	8.18e-11	-7.31e+00	7.31e+00	4.16e-02	0.00e+00	0.00e+00	7.48e+00	7.17e+00	7.28e+00	4.66e-02	3.77e-02	4.06e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	25828867	25831842	ENSMUSG00000025736	0.5440	+	Jmjd8	protein_coding	9.30e-13	9.04e-11	-5.20e+00	9.48e+00	2.45e-01	4.29e+00	6.34e-03	9.66e+00	9.66e+00	9.11e+00	2.74e-01	2.74e-01	1.87e-01	4.17e+00	4.52e+00	4.17e+00	5.77e-03	7.47e-03	5.77e-03
chr6	113631649	113633144	ENSMUSG00000097671	0.5107	-	1700015O11Rik	lincRNA	1.15e-12	1.11e-10	-7.49e+00	7.21e+00	1.43e-01	0.00e+00	0.00e+00	6.32e+00	6.89e+00	8.41e+00	6.30e-02	9.41e-02	2.71e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr3	97125511	97126113	ENSMUSG00000106324	0.4196	-	Gm43222	processed_pseudogene	1.30e-12	1.25e-10	6.94e+00	3.33e-01	2.66e-04	4.68e+00	1.30e-01	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	2.32e+00	8.90e+00	2.81e+00	3.19e-03	3.81e-01	4.78e-03
chr3	88328655	88336148	ENSMUSG00000001420	0.5149	-	Tmem79	protein_coding	1.31e-12	1.26e-10	-6.29e+00	7.84e+00	6.54e-02	9.36e-01	5.60e-04	7.53e+00	7.76e+00	8.24e+00	5.15e-02	6.05e-02	8.43e-02	0.00e+00	2.81e+00	0.00e+00	0.00e+00	1.68e-03	0.00e+00
chr2	155775342	155818366	ENSMUSG00000027612	0.4902	+	Mmp24	protein_coding	1.34e-12	1.27e-10	-7.27e+00	7.25e+00	3.17e-02	0.00e+00	0.00e+00	7.31e+00	7.48e+00	6.95e+00	3.27e-02	3.69e-02	2.55e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	149144263	149153540	ENSMUSG00000107388	0.4528	+	Gm42788	lincRNA	1.41e-12	1.34e-10	-7.19e+00	7.18e+00	1.16e-01	0.00e+00	0.00e+00	7.06e+00	7.09e+00	7.40e+00	1.05e-01	1.08e-01	1.34e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr1	180165238	180199602	ENSMUSG00000026489	0.5058	-	Coq8a	protein_coding	1.59e-12	1.50e-10	-5.49e+00	8.68e+00	2.55e-02	3.04e+00	5.10e-04	8.37e+00	9.02e+00	8.67e+00	2.02e-02	3.16e-02	2.48e-02	2.00e+00	3.81e+00	3.32e+00	1.83e-04	7.95e-04	5.50e-04
chr1	23761753	23849158	ENSMUSG00000026156	0.4316	+	B3gat2	protein_coding	1.98e-12	1.86e-10	-7.34e+00	7.33e+00	2.40e-02	0.00e+00	0.00e+00	7.13e+00	7.48e+00	7.38e+00	2.08e-02	2.65e-02	2.48e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr15	71795795	72034227	ENSMUSG00000079022	0.4426	-	Col22a1	protein_coding	2.07e-12	1.93e-10	-5.77e+00	8.35e+00	3.79e-02	2.04e+00	5.81e-04	8.19e+00	8.36e+00	8.49e+00	3.38e-02	3.80e-02	4.17e-02	3.32e+00	2.81e+00	0.00e+00	1.05e-03	6.98e-04	0.00e+00
chr3	95296096	95307176	ENSMUSG00000015702	0.4791	-	Anxa9	protein_coding	2.12e-12	1.96e-10	-6.69e+00	7.41e+00	5.33e-02	5.28e-01	2.08e-04	7.33e+00	7.18e+00	7.71e+00	5.00e-02	4.50e-02	6.50e-02	0.00e+00	1.58e+00	0.00e+00	0.00e+00	6.25e-04	0.00e+00
chr3	96706067	96708562	ENSMUSG00000028100	0.5317	-	Nudt17	protein_coding	2.18e-12	2.01e-10	-7.34e+00	7.33e+00	5.49e-02	0.00e+00	0.00e+00	7.32e+00	7.07e+00	7.59e+00	5.41e-02	4.53e-02	6.54e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr14	16430842	16575472	ENSMUSG00000017491	0.4387	-	Rarb	protein_coding	3.04e-12	2.79e-10	-4.99e+00	9.56e+00	3.03e-01	4.29e+00	9.13e-03	9.49e+00	9.49e+00	9.69e+00	2.89e-01	2.88e-01	3.33e-01	4.09e+00	5.46e+00	3.32e+00	6.44e-03	1.73e-02	3.62e-03
chr17	23660523	23668610	ENSMUSG00000043782	0.5378	+	Ccdc64b	protein_coding	4.20e-12	3.84e-10	-7.22e+00	7.22e+00	9.27e-02	0.00e+00	0.00e+00	7.14e+00	7.26e+00	7.27e+00	8.75e-02	9.50e-02	9.56e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	7417625	7425904	ENSMUSG00000053080	0.5798	+	2700081O15Rik	protein_coding	4.52e-12	4.11e-10	-5.18e+00	8.82e+00	5.07e-02	3.65e+00	1.29e-03	8.73e+00	8.52e+00	9.19e+00	4.69e-02	4.05e-02	6.45e-02	3.32e+00	3.81e+00	3.81e+00	9.94e-04	1.44e-03	1.44e-03
chr17	24527241	24534210	ENSMUSG00000079657	0.5366	-	Rab26	protein_coding	4.64e-12	4.19e-10	-6.71e+00	7.44e+00	4.88e-02	5.28e-01	1.88e-04	7.49e+00	7.34e+00	7.50e+00	5.04e-02	4.54e-02	5.07e-02	0.00e+00	1.58e+00	0.00e+00	0.00e+00	5.64e-04	0.00e+00
chr4	134102570	134127593	ENSMUSG00000012126	0.5335	+	Ubxn11	protein_coding	4.68e-12	4.21e-10	-5.51e+00	8.67e+00	3.76e-02	1.55e+00	7.36e-04	8.42e+00	8.84e+00	8.74e+00	3.14e-02	4.21e-02	3.93e-02	4.64e+00	0.00e+00	0.00e+00	2.21e-03	0.00e+00	0.00e+00
chr10	130412499	130413312	ENSMUSG00000040540	0.5614	+	Gm9770	pseudogene	4.98e-12	4.46e-10	5.18e+00	5.09e+00	2.92e-02	6.19e+00	1.08e+00	5.55e+00	5.61e+00	4.09e+00	3.67e-02	3.83e-02	1.28e-02	3.00e+00	3.58e+00	1.20e+01	5.58e-03	8.77e-03	3.24e+00
chrX	73774405	73778925	ENSMUSG00000002007	0.5368	+	Srpk3	protein_coding	5.41e-12	4.81e-10	-7.19e+00	7.19e+00	9.22e-02	0.00e+00	0.00e+00	7.30e+00	7.12e+00	7.15e+00	9.96e-02	8.75e-02	8.94e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr17	35994453	36038435	ENSMUSG00000092368	0.4683	+	A930015D03Rik	antisense	5.42e-12	4.81e-10	-6.52e+00	7.51e+00	1.46e-01	6.67e-01	7.97e-04	7.29e+00	7.49e+00	7.75e+00	1.24e-01	1.43e-01	1.71e-01	2.00e+00	0.00e+00	0.00e+00	2.39e-03	0.00e+00	0.00e+00
chr5	143464584	143505942	ENSMUSG00000039206	0.4889	+	Daglb	protein_coding	5.89e-12	5.18e-10	-4.88e+00	1.00e+01	1.38e-01	5.14e+00	4.59e-03	9.96e+00	9.81e+00	1.03e+01	1.32e-01	1.19e-01	1.64e-01	4.95e+00	5.04e+00	5.43e+00	3.97e-03	4.23e-03	5.56e-03
chr14	13918444	13949558	ENSMUSG00000079357	0.4247	+	Gm11100	antisense	5.90e-12	5.18e-10	-7.19e+00	7.13e+00	1.16e-01	0.00e+00	0.00e+00	6.54e+00	7.36e+00	7.51e+00	7.34e-02	1.30e-01	1.44e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr5	120476526	120483932	ENSMUSG00000029597	0.5308	+	Sds	protein_coding	6.14e-12	5.35e-10	-7.19e+00	7.14e+00	5.05e-02	0.00e+00	0.00e+00	7.62e+00	7.04e+00	6.75e+00	6.85e-02	4.58e-02	3.74e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr4	46038935	46116032	ENSMUSG00000028328	0.4920	+	Tmod1	protein_coding	6.16e-12	5.35e-10	-5.12e+00	9.06e+00	9.83e-02	3.92e+00	2.64e-03	9.14e+00	8.98e+00	9.06e+00	1.04e-01	9.26e-02	9.83e-02	4.17e+00	3.58e+00	4.00e+00	3.13e-03	2.03e-03	2.76e-03
chr15	78850862	78855529	ENSMUSG00000043501	0.5120	-	Lgals2	protein_coding	7.08e-12	6.10e-10	-6.45e+00	7.44e+00	1.24e-01	6.67e-01	7.15e-04	7.29e+00	7.45e+00	7.58e+00	1.11e-01	1.24e-01	1.37e-01	2.00e+00	0.00e+00	0.00e+00	2.14e-03	0.00e+00	0.00e+00
chr15	98571004	98589588	ENSMUSG00000022993	0.4567	+	4930415O20Rik	protein_coding	7.08e-12	6.10e-10	-7.20e+00	7.17e+00	1.05e-01	0.00e+00	0.00e+00	7.24e+00	7.45e+00	6.83e+00	1.09e-01	1.26e-01	8.18e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr19	5092871	5098418	ENSMUSG00000024873	0.5624	-	Cnih2	protein_coding	7.75e-12	6.65e-10	-5.97e+00	7.83e+00	1.23e-01	1.33e+00	1.44e-03	7.56e+00	7.99e+00	7.94e+00	1.01e-01	1.37e-01	1.32e-01	1.00e+00	3.00e+00	0.00e+00	5.40e-04	3.78e-03	0.00e+00
chr11	62604884	62648523	ENSMUSG00000046417	0.4934	-	Lrrc75a	protein_coding	9.64e-12	8.23e-10	-4.76e+00	1.04e+01	5.75e-01	5.50e+00	2.09e-02	1.02e+01	1.06e+01	1.04e+01	5.04e-01	6.50e-01	5.70e-01	5.21e+00	4.86e+00	6.44e+00	1.50e-02	1.17e-02	3.59e-02
chr6	88503605	88504277	ENSMUSG00000107659	0.5721	+	Gm44170	antisense	9.72e-12	8.23e-10	-7.15e+00	7.14e+00	1.13e-01	0.00e+00	0.00e+00	7.38e+00	7.03e+00	7.01e+00	1.32e-01	1.04e-01	1.02e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chr11	48806404	48817353	ENSMUSG00000040365	0.4889	-	Trim41	protein_coding	9.74e-12	8.23e-10	-4.68e+00	1.16e+01	6.38e-01	6.83e+00	2.46e-02	1.16e+01	1.16e+01	1.15e+01	6.51e-01	6.65e-01	5.98e-01	6.49e+00	7.38e+00	6.61e+00	1.87e-02	3.47e-02	2.04e-02
chr8	121598703	121652901	ENSMUSG00000061410	0.5160	-	Zcchc14	protein_coding	1.09e-11	9.16e-10	-4.76e+00	1.07e+01	2.34e-01	5.93e+00	8.54e-03	1.05e+01	1.03e+01	1.13e+01	1.96e-01	1.72e-01	3.35e-01	5.91e+00	6.46e+00	5.43e+00	8.04e-03	1.19e-02	5.73e-03
chr11	100713850	100714575	ENSMUSG00000017832	0.5978	+	Hspb9	protein_coding	1.15e-11	9.63e-10	-7.10e+00	7.06e+00	1.21e-01	0.00e+00	0.00e+00	6.98e+00	6.69e+00	7.51e+00	1.11e-01	9.07e-02	1.61e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00
chrX	162778919	162829454	ENSMUSG00000038344	0.4118	-	Txlng	protein_coding	1.37e-11	1.14e-09	-4.81e+00	9.77e+00	1.16e-01	4.95e+00	3.98e-03	9.53e+00	1.00e+01	9.74e+00	9.66e-02	1.38e-01	1.12e-01	5.04e+00	5.17e+00	4.64e+00	4.20e-03	4.59e-03	3.15e-03
chr11	100627543	100692455	ENSMUSG00000014198	0.5052	-	Zfp385c	protein_coding	1.37e-11	1.14e-09	-7.17e+00	7.13e+00	2.27e-02	0.00e+00	0.00e+00	6.94e+00	7.58e+00	6.88e+00	1.93e-02	3.01e-02	1.86e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00

Download the DEG result list for CL_vs_CI.
Download the whole result list for CL_vs_CI.

DEG table for the contrast MU_vs_CU

The following table presents the top 10% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast MU_vs_CU. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right.

chromosome	start	end	gene_id	gc_content	strand	gene_name	biotype	p-value_deseq	FDR_deseq	log2_normalized_fold_change_MU_vs_CU	log2_normalized_mean_counts_MU	rpgm_normalized_mean_counts_MU	log2_normalized_mean_counts_CU	rpgm_normalized_mean_counts_CU	log2_normalized_counts_GK3R140_MU1	log2_normalized_counts_GK3R141_MU2	log2_normalized_counts_GK3R142_MU3	rpgm_normalized_counts_GK3R140_MU1	rpgm_normalized_counts_GK3R141_MU2	rpgm_normalized_counts_GK3R142_MU3	log2_normalized_counts_GK3R146_CU1	log2_normalized_counts_GK3R147_CU2	log2_normalized_counts_GK3R148_CU3	rpgm_normalized_counts_GK3R146_CU1	rpgm_normalized_counts_GK3R147_CU2	rpgm_normalized_counts_GK3R148_CU3
chr7	46711998	46715700	ENSMUSG00000040026	0.4807	-	Saa3	protein_coding	3.30e-26	6.00e-22	9.010337	2.11e+00	1.38e-03	1.17e+01	8.23e-01	0.00e+00	2.32e+00	4.00e+00	0.00e+00	8.71e-04	3.27e-03	1.23e+01	1.04e+01	1.23e+01	1.09e+00	3.03e-01	1.08e+00
chr2	143150830	143151630	ENSMUSG00000083047	0.4906	-	Gm14082	processed_pseudogene	4.23e-24	3.85e-20	9.037089	0.00e+00	0.00e+00	7.89e+00	4.18e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	1.01e+01	4.81e+00	8.75e+00	8.91e-01	2.15e-02	3.42e-01
chr2	9857078	9890034	ENSMUSG00000015619	0.4826	-	Gata3	protein_coding	2.41e-20	1.46e-16	7.820179	6.67e-01	1.01e-04	7.37e+00	5.71e-02	1.00e+00	0.00e+00	1.00e+00	1.52e-04	0.00e+00	1.52e-04	9.77e+00	4.46e+00	7.88e+00	1.33e-01	3.19e-03	3.56e-02
chr11	100228845	100232078	ENSMUSG00000084257	0.4858	-	Gm11597	unprocessed_pseudogene	3.84e-20	1.74e-16	8.252665	0.00e+00	0.00e+00	6.97e+00	2.42e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	9.40e+00	3.70e+00	7.81e+00	5.39e-01	9.57e-03	1.79e-01
chr13	8940336	8940977	ENSMUSG00000061988	0.5171	-	Rpl10a-ps2	processed_pseudogene	5.44e-19	1.98e-15	7.242741	1.72e+00	2.13e-03	8.32e+00	4.42e-01	1.00e+00	1.58e+00	2.58e+00	7.97e-04	1.59e-03	3.99e-03	1.02e+01	6.00e+00	8.76e+00	9.30e-01	5.02e-02	3.46e-01
chr3	95410346	95411207	ENSMUSG00000096177	0.5580	-	Gm5070	processed_pseudogene	3.32e-17	1.01e-13	6.362651	3.34e+00	7.44e-03	8.28e+00	6.77e-01	3.70e+00	3.00e+00	3.32e+00	9.57e-03	5.58e-03	7.18e-03	1.11e+01	5.36e+00	8.41e+00	1.73e+00	3.19e-02	2.70e-01
chr14	69029289	69041401	ENSMUSG00000014813	0.4445	+	Stc1	protein_coding	1.05e-15	2.74e-12	6.227806	2.58e+00	1.28e-03	8.00e+00	1.14e-01	2.58e+00	3.17e+00	2.00e+00	1.20e-03	1.93e-03	7.23e-04	9.90e+00	5.36e+00	8.74e+00	2.30e-01	9.63e-03	1.03e-01
chr8	106603351	106670246	ENSMUSG00000000303	0.4703	+	Cdh1	protein_coding	4.20e-15	9.47e-12	7.040016	5.28e-01	1.61e-04	3.78e+00	5.28e-02	1.58e+00	0.00e+00	0.00e+00	4.83e-04	0.00e+00	0.00e+00	2.00e+00	0.00e+00	9.35e+00	7.25e-04	0.00e+00	1.58e-01
chr2	181147653	181157014	ENSMUSG00000016349	0.5490	-	Eef1a2	protein_coding	4.69e-15	9.47e-12	7.665336	0.00e+00	0.00e+00	6.54e+00	1.28e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	8.92e+00	3.91e+00	6.78e+00	3.06e-01	8.86e-03	6.90e-02
chr3	152153447	152154116	ENSMUSG00000084343	0.5194	+	Gm16198	processed_pseudogene	7.99e-15	1.45e-11	7.346514	3.33e-01	2.66e-04	6.79e+00	1.72e-01	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	0.00e+00	8.80e+00	4.00e+00	7.56e+00	3.55e-01	1.20e-02	1.50e-01
chrX	90744546	90745062	ENSMUSG00000084289	0.4565	-	Gm6977	processed_pseudogene	1.52e-13	2.36e-10	5.142193	4.81e+00	2.29e-02	9.28e+00	8.35e-01	5.29e+00	5.04e+00	4.09e+00	3.03e-02	2.55e-02	1.28e-02	1.11e+01	7.06e+00	9.70e+00	1.74e+00	1.05e-01	6.60e-01
chr2	144142488	144143373	ENSMUSG00000082480	0.5756	-	Gm11687	processed_pseudogene	1.56e-13	2.36e-10	5.814493	2.46e+00	3.99e-03	7.16e+00	2.68e-01	2.81e+00	3.00e+00	1.58e+00	4.78e-03	5.58e-03	1.59e-03	9.67e+00	4.32e+00	7.48e+00	6.49e-01	1.52e-02	1.41e-01
chr11	43670801	43671484	ENSMUSG00000083662	0.5044	+	Gm12152	processed_pseudogene	2.08e-13	2.91e-10	7.437405	0.00e+00	0.00e+00	5.85e+00	1.37e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	8.82e+00	2.81e+00	5.91e+00	3.60e-01	4.78e-03	4.70e-02
chr5	90759360	90761624	ENSMUSG00000029371	0.4190	+	Cxcl5	protein_coding	2.70e-13	3.50e-10	5.309328	2.80e+00	2.82e-03	8.10e+00	1.28e-01	2.00e+00	2.81e+00	3.58e+00	1.27e-03	2.54e-03	4.65e-03	8.73e+00	7.15e+00	8.43e+00	1.79e-01	5.96e-02	1.46e-01
chr9	108358202	108359069	ENSMUSG00000104280	0.5703	-	Rps2-ps11	processed_pseudogene	6.13e-13	7.43e-10	5.765535	2.72e+00	4.52e-03	7.19e+00	2.88e-01	3.00e+00	2.58e+00	2.58e+00	5.58e-03	3.99e-03	3.99e-03	9.81e+00	4.32e+00	7.43e+00	7.14e-01	1.52e-02	1.36e-01
chr5	73476447	73477353	ENSMUSG00000082039	0.5413	-	Gm15653	processed_pseudogene	1.65e-12	1.88e-09	6.510058	1.19e+00	1.06e-03	6.36e+00	1.69e-01	1.58e+00	1.00e+00	1.00e+00	1.59e-03	7.97e-04	7.97e-04	8.94e+00	3.00e+00	7.13e+00	3.90e-01	5.58e-03	1.11e-01
chrX	57736547	57738555	ENSMUSG00000080710	0.4032	-	Gm8107	processed_pseudogene	2.47e-12	2.64e-09	7.196397	0.00e+00	0.00e+00	5.99e+00	1.16e-01	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	8.45e+00	3.17e+00	6.34e+00	2.78e-01	6.38e-03	6.38e-02
chr6	79048116	79048824	ENSMUSG00000107772	0.4993	+	Gm5311	processed_pseudogene	2.79e-12	2.82e-09	6.311586	1.19e+00	1.06e-03	6.24e+00	1.47e-01	1.58e+00	1.00e+00	1.00e+00	1.59e-03	7.97e-04	7.97e-04	8.61e+00	2.81e+00	7.30e+00	3.11e-01	4.78e-03	1.25e-01
chr11	82057823	82062955	ENSMUSG00000020676	0.4282	+	Ccl11	protein_coding	2.37e-11	2.19e-08	5.294621	1.39e+00	8.78e-04	6.71e+00	5.46e-02	1.58e+00	1.00e+00	1.58e+00	1.05e-03	5.27e-04	1.05e-03	6.83e+00	6.55e+00	6.73e+00	5.95e-02	4.90e-02	5.53e-02
chr3	19957054	20009145	ENSMUSG00000003617	0.3946	+	Cp	protein_coding	2.41e-11	2.19e-08	5.281286	1.53e+00	9.44e-05	6.81e+00	5.46e-03	2.00e+00	1.00e+00	1.58e+00	1.42e-04	4.72e-05	9.44e-05	7.28e+00	6.86e+00	6.30e+00	7.27e-03	5.43e-03	3.68e-03
chr2	131846395	131847688	ENSMUSG00000083469	0.4660	+	Gm14281	processed_pseudogene	5.46e-11	4.73e-08	6.807355	0.00e+00	0.00e+00	5.98e+00	8.85e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	7.88e+00	3.58e+00	6.48e+00	1.87e-01	8.77e-03	7.02e-02
chr11	97332109	97352077	ENSMUSG00000070337	0.5287	-	Gpr179	protein_coding	5.89e-11	4.87e-08	6.754888	0.00e+00	0.00e+00	5.72e+00	2.21e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	7.91e+00	3.00e+00	6.25e+00	4.93e-02	1.44e-03	1.55e-02
chr2	32384633	32388252	ENSMUSG00000026822	0.5470	-	Lcn2	protein_coding	9.93e-11	7.84e-08	5.614710	0.00e+00	0.00e+00	5.38e+00	9.15e-03	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.48e+00	4.52e+00	5.13e+00	1.68e-02	4.19e-03	6.48e-03
chr3	97125511	97126113	ENSMUSG00000106324	0.4196	-	Gm43222	processed_pseudogene	2.01e-10	1.52e-07	5.714246	3.33e-01	2.66e-04	5.11e+00	5.50e-02	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	0.00e+00	7.23e+00	2.32e+00	5.78e+00	1.19e-01	3.19e-03	4.31e-02
chr6	39653450	39653965	ENSMUSG00000091313	0.4845	-	Fth-ps2	processed_pseudogene	2.49e-10	1.81e-07	5.632268	1.67e+00	1.86e-03	6.55e+00	1.31e-01	2.00e+00	1.00e+00	2.00e+00	2.39e-03	7.97e-04	2.39e-03	8.30e+00	4.00e+00	7.36e+00	2.51e-01	1.20e-02	1.30e-01
chr1	9908638	9942085	ENSMUSG00000046101	0.3985	+	Mcmdc2	protein_coding	3.50e-10	2.44e-07	4.672425	3.33e-01	4.66e-05	4.09e+00	4.61e-03	0.00e+00	1.00e+00	0.00e+00	0.00e+00	1.40e-04	0.00e+00	5.73e+00	1.00e+00	5.55e+00	7.26e-03	1.40e-04	6.43e-03
chr11	31357307	31370074	ENSMUSG00000020303	0.4995	-	Stc2	protein_coding	8.30e-10	5.59e-07	4.173995	5.28e+00	5.81e-03	8.83e+00	1.07e-01	5.49e+00	4.95e+00	5.39e+00	6.66e-03	4.54e-03	6.21e-03	1.05e+01	6.79e+00	9.21e+00	2.16e-01	1.67e-02	8.97e-02
chr2	126034658	126091185	ENSMUSG00000027208	0.4000	+	Fgf7	protein_coding	1.74e-09	1.13e-06	4.906891	3.33e-01	8.07e-05	5.30e+00	9.44e-03	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	2.42e-04	5.61e+00	4.95e+00	5.32e+00	1.16e-02	7.26e-03	9.44e-03
chr5	134945119	134946934	ENSMUSG00000047501	0.5683	-	Cldn4	protein_coding	2.69e-09	1.68e-06	5.705056	8.62e-01	5.02e-04	5.74e+00	5.18e-02	1.58e+00	1.00e+00	0.00e+00	1.00e-03	5.02e-04	0.00e+00	7.61e+00	2.81e+00	6.79e+00	9.73e-02	3.01e-03	5.52e-02
chr7	17138871	17139472	ENSMUSG00000108694	0.5150	-	Gm7287	processed_pseudogene	3.61e-09	2.19e-06	4.722871	3.11e+00	6.38e-03	6.86e+00	1.89e-01	3.58e+00	2.58e+00	3.17e+00	8.77e-03	3.99e-03	6.38e-03	9.13e+00	4.39e+00	7.04e+00	4.46e-01	1.59e-02	1.04e-01
chr11	12936834	12937938	ENSMUSG00000083859	0.5231	-	Gm12003	processed_pseudogene	3.76e-09	2.20e-06	4.602884	2.58e+00	4.52e-03	6.47e+00	1.28e-01	1.58e+00	3.00e+00	3.17e+00	1.59e-03	5.58e-03	6.38e-03	8.43e+00	4.00e+00	6.98e+00	2.74e-01	1.20e-02	9.97e-02
chr19	18581455	18582228	ENSMUSG00000080783	0.5375	+	Gm8250	processed_pseudogene	7.43e-09	4.22e-06	6.254241	0.00e+00	0.00e+00	5.41e+00	6.01e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	7.20e+00	2.81e+00	6.23e+00	1.16e-01	4.78e-03	5.90e-02
chr6	127411130	127411733	ENSMUSG00000106883	0.4702	+	Gm43632	processed_pseudogene	7.90e-09	4.35e-06	6.005625	3.33e-01	2.66e-04	5.54e+00	6.75e-02	1.00e+00	0.00e+00	0.00e+00	7.97e-04	0.00e+00	0.00e+00	7.31e+00	2.81e+00	6.51e+00	1.26e-01	4.78e-03	7.18e-02
chr10	43578284	43584265	ENSMUSG00000047139	0.4982	+	Cd24a	protein_coding	1.01e-08	5.38e-06	3.953350	3.65e+00	4.32e-03	7.39e+00	7.06e-02	5.25e+00	3.70e+00	2.00e+00	9.23e-03	2.99e-03	7.49e-04	9.28e+00	5.32e+00	7.57e+00	1.55e-01	9.73e-03	4.72e-02
chr13	41182495	41220405	ENSMUSG00000021364	0.4502	-	Elovl2	protein_coding	1.71e-08	8.89e-06	5.473416	1.06e+00	3.29e-04	5.77e+00	2.53e-02	1.58e+00	1.58e+00	0.00e+00	4.93e-04	4.93e-04	0.00e+00	7.66e+00	3.00e+00	6.66e+00	4.96e-02	1.73e-03	2.47e-02
chr1	37026596	37187613	ENSMUSG00000050122	0.4499	+	Vwa3b	protein_coding	1.79e-08	9.05e-06	5.776104	5.28e-01	3.22e-05	5.62e+00	4.36e-03	0.00e+00	0.00e+00	1.58e+00	0.00e+00	0.00e+00	9.65e-05	7.33e+00	2.81e+00	6.73e+00	7.72e-03	2.89e-04	5.07e-03
chr3	34183307	34184192	ENSMUSG00000105739	0.4458	+	Gm5708	processed_pseudogene	1.84e-08	9.06e-06	5.870365	3.33e-01	2.66e-04	5.08e+00	6.14e-02	0.00e+00	0.00e+00	1.00e+00	0.00e+00	0.00e+00	7.97e-04	7.45e+00	2.00e+00	5.78e+00	1.39e-01	2.39e-03	4.31e-02
chr3	103864706	103866797	ENSMUSG00000105986	0.4039	+	Gm43065	sense_intronic	2.65e-08	1.27e-05	6.142958	0.00e+00	0.00e+00	4.95e+00	5.56e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	7.34e+00	2.00e+00	5.52e+00	1.28e-01	2.39e-03	3.59e-02
chr17	57203970	57228136	ENSMUSG00000024164	0.5201	-	C3	protein_coding	2.80e-08	1.31e-05	3.849378	2.97e+00	2.28e-03	7.12e+00	3.64e-02	1.58e+00	4.00e+00	3.32e+00	5.26e-04	3.94e-03	2.37e-03	7.21e+00	6.91e+00	7.23e+00	3.86e-02	3.13e-02	3.92e-02
chr4	59090187	59090929	ENSMUSG00000081432	0.4845	+	Gm12593	processed_pseudogene	3.01e-08	1.37e-05	6.058894	0.00e+00	0.00e+00	5.24e+00	5.24e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	7.18e+00	3.00e+00	5.55e+00	1.15e-01	5.58e-03	3.67e-02
chr16	37011786	37095417	ENSMUSG00000034206	0.4020	+	Polq	protein_coding	3.60e-08	1.59e-05	4.947978	2.13e+00	1.07e-04	6.14e+00	4.09e-03	2.58e+00	1.00e+00	2.81e+00	1.33e-04	2.67e-05	1.60e-04	8.31e+00	3.00e+00	7.10e+00	8.46e-03	1.87e-04	3.63e-03
chr11	46243571	46244194	ENSMUSG00000081078	0.4744	-	Gm12568	processed_pseudogene	3.69e-08	1.59e-05	5.569856	8.62e-01	7.97e-04	5.51e+00	7.50e-02	1.58e+00	0.00e+00	1.00e+00	1.59e-03	0.00e+00	7.97e-04	7.64e+00	2.58e+00	6.30e+00	1.59e-01	3.99e-03	6.22e-02
chr9	72606381	72607197	ENSMUSG00000098275	0.4896	-	Gm18014	processed_pseudogene	4.10e-08	1.73e-05	6.101538	0.00e+00	0.00e+00	4.63e+00	5.40e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	7.44e+00	1.58e+00	4.86e+00	1.38e-01	1.59e-03	2.23e-02
chr6	146782469	146783274	ENSMUSG00000107788	0.5633	+	Gm6266	processed_pseudogene	6.44e-08	2.66e-05	4.561246	2.88e+00	5.32e-03	6.35e+00	1.44e-01	3.00e+00	2.32e+00	3.32e+00	5.58e-03	3.19e-03	7.18e-03	8.76e+00	3.70e+00	6.58e+00	3.45e-01	9.57e-03	7.58e-02
chr5	90891241	90893115	ENSMUSG00000029380	0.4464	+	Cxcl1	protein_coding	6.71e-08	2.71e-05	3.823122	2.87e+00	4.15e-03	6.72e+00	6.59e-02	3.70e+00	1.58e+00	3.32e+00	6.50e-03	1.08e-03	4.88e-03	6.85e+00	5.64e+00	7.67e+00	6.18e-02	2.65e-02	1.09e-01
chr1	182127406	182128189	ENSMUSG00000103018	0.5421	-	Gm17968	processed_pseudogene	7.79e-08	3.08e-05	6.142958	0.00e+00	0.00e+00	4.37e+00	5.56e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	7.54e+00	1.00e+00	4.58e+00	1.48e-01	7.97e-04	1.83e-02
chrX	146175942	146176577	ENSMUSG00000081738	0.4654	+	Hmgb1-ps2	processed_pseudogene	1.14e-07	4.42e-05	4.401655	2.85e+00	5.05e-03	6.46e+00	1.23e-01	3.17e+00	2.81e+00	2.58e+00	6.38e-03	4.78e-03	3.99e-03	8.41e+00	4.25e+00	6.71e+00	2.71e-01	1.44e-02	8.29e-02
chr10	4611593	5005614	ENSMUSG00000019768	0.4108	+	Esr1	protein_coding	1.49e-07	5.56e-05	5.129283	1.64e+00	1.67e-04	5.88e+00	8.27e-03	1.58e+00	2.32e+00	1.00e+00	1.43e-04	2.86e-04	7.15e-05	8.03e+00	3.32e+00	6.30e+00	1.86e-02	6.43e-04	5.58e-03
chr2	43555329	43682715	ENSMUSG00000026866	0.3772	+	Kynu	protein_coding	1.50e-07	5.56e-05	5.718818	0.00e+00	0.00e+00	4.79e+00	5.43e-03	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.69e+00	2.00e+00	5.67e+00	1.07e-02	3.15e-04	5.25e-03
chr2	164562413	164568510	ENSMUSG00000017723	0.5202	+	Wfdc2	protein_coding	1.73e-07	6.29e-05	5.745954	0.00e+00	0.00e+00	2.44e+00	1.07e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	7.31e+00	0.00e+00	0.00e+00	3.20e-02
chrX	77717052	77717983	ENSMUSG00000081358	0.4324	-	Gm14746	processed_pseudogene	1.80e-07	6.42e-05	5.604862	0.00e+00	0.00e+00	4.93e+00	3.80e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.41e+00	2.58e+00	5.78e+00	6.70e-02	3.99e-03	4.31e-02
chr8	126981593	126982232	ENSMUSG00000110648	0.4719	-	RP23-382B3.1	processed_pseudogene	2.08e-07	7.27e-05	4.456149	2.66e+00	4.52e-03	6.45e+00	1.16e-01	2.81e+00	2.00e+00	3.17e+00	4.78e-03	2.39e-03	6.38e-03	8.21e+00	4.17e+00	6.95e+00	2.36e-01	1.36e-02	9.81e-02
chr7	127925716	127930104	ENSMUSG00000030800	0.5455	-	Prss8	protein_coding	4.53e-07	1.55e-04	5.235216	0.00e+00	0.00e+00	4.61e+00	8.13e-03	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.32e+00	2.81e+00	4.70e+00	1.75e-02	1.33e-03	5.54e-03
chr8	92357625	92376286	ENSMUSG00000031737	0.5091	+	Irx5	protein_coding	4.95e-07	1.66e-04	5.383704	3.33e-01	9.50e-05	4.09e+00	1.56e-02	1.00e+00	0.00e+00	0.00e+00	2.85e-04	0.00e+00	0.00e+00	6.99e+00	0.00e+00	5.29e+00	3.59e-02	0.00e+00	1.08e-02
chr7	140967221	140969825	ENSMUSG00000025491	0.4868	+	Ifitm1	protein_coding	7.35e-07	2.43e-04	4.209453	6.67e-01	6.88e-04	5.17e+00	2.48e-02	0.00e+00	0.00e+00	2.00e+00	0.00e+00	0.00e+00	2.06e-03	4.75e+00	5.13e+00	5.61e+00	1.79e-02	2.34e-02	3.30e-02
chr9	65364887	65365946	ENSMUSG00000111092	0.4991	+	RP24-131G14.5	processed_pseudogene	8.68e-07	2.82e-04	5.614710	0.00e+00	0.00e+00	4.65e+00	3.83e-02	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	0.00e+00	6.89e+00	2.58e+00	4.46e+00	9.41e-02	3.99e-03	1.67e-02

Download the DEG result list for MU_vs_CU.
Download the whole result list for MU_vs_CU.

References

Anders, S., and Huber, W. (2010). Differential expression analysis for sequence count data. Genome Biol 11, R106.
Planet, E., Attolini, C.S., Reina, O., Flores, O., and Rossell, D. (2012). htSeqTools: high-throughput sequencing quality control, processing and visualization in R. Bioinformatics 28, 589-590.
Tarazona, S., Garcia-Alcalde, F., Dopazo, J., Ferrer, A., and Conesa, A. (2011). Differential expression in RNA-seq: a matter of depth. Genome Res 21, 2213-2223.
Risso, D., Schwartz, K., Sherlock, G., and Dudoit, S. (2011). GC-content normalization for RNA-Seq data. BMC Bioinformatics 12, 480.
Benjamini, Y., and Hochberg, Y. (1995). Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing. Journal of the Royal Statistical Society Series B (Methodological) 57, 289-300.