samtools merge mergedDK3R1r-C1.bam DK3R1r-C1.bam /data/images/proton2/run343/www/DK3R1r-C1.bam
samtools merge mergedDK3R2r-C2.bam DK3R2r-C2.bam /data/images/proton2/run343/www/DK3R2r-C2.bam
samtools merge mergedDK3R3r-C3.bam DK3R3r-C3.bam /data/images/proton2/run343/www/DK3R3r-C3.bam
samtools merge mergedDK3R4b-K23.bam DK3R4b-K23.bam /data/images/proton2/run343/www/DK3R4b-K23.bam
samtools merge mergedDK3R5-K2.bam DK3R5-K2.bam /data/images/proton2/run343/www/DK3R5-K2.bam
samtools merge mergedDK3R6-K3.bam DK3R6-K3.bam /data/images/proton2/run343/www/DK3R6-K3.bam
samtools merge mergedDK3R7-C1L4.bam DK3R7-C1L4.bam /data/images/proton2/run343/www/DK3R7-C1L4.bam
samtools merge mergedDK3R8-C2L4.bam DK3R8-C2L4.bam /data/images/proton2/run343/www/DK3R8-C2L4.bam
samtools merge mergedDK3R9r-C3L4.bam DK3R9r-C3L4.bam /data/images/proton2/run343/www/DK3R9r-C3L4.bam
samtools merge mergedDK3R10b-K23L4.bam DK3R10b-K23L4.bam /data/images/proton2/run343/www/DK3R10b-K23L4.bam
samtools merge mergedDK3R11-K2L4.bam DK3R11-K2L4.bam /data/images/proton2/run343/www/DK3R11-K2L4.bam
samtools merge mergedDK3R12-K3L4.bam DK3R12-K3L4.bam /data/images/proton2/run343/www/DK3R12-K3L4.bam