Report for Auto_user_IONAS-343-DKlab_170424_DK3R1-12_447
Library Summary
Based on Predicted Per-Base Quality Scores - Independent of Alignment
| Total Number of Bases [Mbp] | 4,166.66 |
|---|---|
| ‣ Number of Q20 Bases [Mbp] | 3,249.31 |
| Total Number of Reads | 28,972,864 |
| Mean Length [bp] | 143 |
| Longest Read [bp] | 389 |
 |  |
Reference Genome Information
| Genome Name | mm10 |
|---|---|
| Genome Size | 2725537669 |
| Genome Version | 1 |
| Index Version | tmap-f3 |
Based on Full Library Alignment to Provided Reference
| AQ17 | AQ20 | Perfect | |
|---|---|---|---|
| Total Number of Bases [Mbp] | 2,446.30 | 1,408.00 | 668.94 |
| Mean Length [bp] | 139 | 128 | 93 |
| Longest Alignment [bp] | 350 | 350 | 317 |
| Mean Coverage Depth | 0.90× | 0.52× | 0.25× |
| Percentage of Library Covered | N/A% | N/A% | N/A% |
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Report Information
Analysis Info
| Run Name | R_2017_04_25_10_53_17_user_IONAS-343-DKlab_170424_DK3R1-12 |
|---|---|
| Run Date | 2017-04-25 07:55:16+00:00 |
| Run Flows | 520 |
| Project | LexoGen_QuantSeq,DKLab_3RNAseq |
| Sample | DK3R9r-C3L4 |
| Library | N/A |
| Reference | mm10 |
| Instrument | IONAS |
| Flow Order | TACGTACGTCTGAGCATCGATCGATGTACAGC |
| Library Key | TCAG |
| TF Key | ATCG |
| Chip Check | Passed |
| Chip Type | P1.1.17 |
| Chip Data | tiled |
| Notes | DKlab_3RNAseq-12samples |
| Barcode Set | IonXpress |
| Analysis Name | Auto_user_IONAS-343-DKlab_170424_DK3R1-12_447 |
| Analysis Date | 2017-04-25 |
| runID | DVW1L |
Software Version
| Torrent_Suite | 5.0.5 |
|---|---|
| host | FW7DQV1 |
| ion-analysis | 5.0.13-1 |
| ion-chefupdates | 5.0.7 |
| ion-dbreports | 5.0.34-1 |
| ion-gpu | 5.0.0-1 |
| ion-pipeline | 5.0.17-1 |
| ion-plugins | 5.0.28-1 |
| ion-protonupdates | 5.0.3 |
| ion-torrentr | 5.0.0-1 |