samplename filename condition paired stranded KOIFN_2 /home/tzanos/Desktop/HuR/BAMfiles/PolysomeSeq/KO_IFN-gamma_replicate_IIb/accepted_hits_chr.bam KOIFN single forward KOIFN_1 /home/tzanos/Desktop/HuR/BAMfiles/PolysomeSeq/KO_IFN_replicate_Ib/accepted_hits_chr.bam KOIFN single forward KOIL4_1 /home/tzanos/Desktop/HuR/BAMfiles/PolysomeSeq/KO_IL4_replicate_Ib/accepted_hits_chr.bam KOIL4 single forward KOIL4_2 /home/tzanos/Desktop/HuR/BAMfiles/PolysomeSeq/KO_IL4_replicate_IIb/accepted_hits_chr.bam KOIL4 single forward wtIFN_1 /home/tzanos/Desktop/HuR/BAMfiles/PolysomeSeq/WT_IFN-gamma_replicate_Ib/accepted_hits_chr.bam wtIFN single forward wtIFN_2 /home/tzanos/Desktop/HuR/BAMfiles/PolysomeSeq/WT_IFN-gamma_replicate_IIb/accepted_hits_chr.bam wtIFN single forward wtIL4_1 /home/tzanos/Desktop/HuR/BAMfiles/PolysomeSeq/WT_IL4_replicate_Ib/accepted_hits_chr.bam wtIL4 single forward wtIL4_2 /home/tzanos/Desktop/HuR/BAMfiles/PolysomeSeq/WT_IL4_replicate_IIb/accepted_hits_chr.bam wtIL4 single forward