samplename filename condition paired stranded wt01 /data/images/proton/DKlab/orsalia/sortedwt01pos.sorted.bam WT0 paired forward wt02 /data/images/proton/DKlab/orsalia/sortedwt02pos.sorted.bam WT0 paired forward wt21 /data/images/proton/DKlab/orsalia/sortedwt21pos.bam WT2 paired forward wt22 /data/images/proton/DKlab/orsalia/sortedwt22pos.bam WT2 paired forward wt61 /data/images/proton/DKlab/orsalia/sortedwt61pos.bam WT6 paired forward wt62 /data/images/proton/DKlab/orsalia/sortedwt62pos.bam WT6 paired forward wtIFN1 /data/images/proton/DKlab/orsalia/sortedwtIFN1pos.bam WTIFN paired forward wtIFN2 /data/images/proton/DKlab/orsalia/sortedwtIFN2pos.bam WTIFN paired forward wt01IL4 /data/images/proton/DKlab/orsalia/sortedwt01IL4pos.bam WTIL4 paired forward wt02LI4 /data/images/proton/DKlab/orsalia/sortedwt02IL4pos.bam WTIL4 paired forward ko01 /data/images/proton/DKlab/orsalia/sortedKo01pos.sorted.bam KO0 paired forward ko02 /data/images/proton/DKlab/orsalia/sortedKo02pos.sorted.bam KO0 paired forward ko21 /data/images/proton/DKlab/orsalia/sortedKO21pos.bam KO2 paired forward ko22 /data/images/proton/DKlab/orsalia/sortedKO22pos.bam KO2 paired forward ko61 /data/images/proton/DKlab/orsalia/sortedKo61pos.bam KO6 paired forward ko62 /data/images/proton/DKlab/orsalia/sortedKo62pos.bam KO6 paired forward koIFN1 /data/images/proton/DKlab/orsalia/sortedKOIFN1pos.bam KOIFN paired forward koIFN2 /data/images/proton/DKlab/orsalia/sortedKOIFN2pos.bam KOIFN paired forward ko01IL4 /data/images/proton/DKlab/orsalia/sortedKo1IL4pos.bam KOIL4 paired forward ko02LI4 /data/images/proton/DKlab/orsalia/sortedKo2IL4pos.bam KOIL4 paired forward