#for i in ?h*Mm.bam
#for i in I*Mm.bam.md.bam
for i in ?h*Mm.bam.md.bam	 
do
    echo $i
    samtools view $i | awk -f /data/images/proton/DKlab/mr/parclip/paralyzer/sam2bowtie.awk  > $i.bt
done