>1_117_5059_F3	ENSMUST00000113126	-	1905	1926	23	44	50	160	13x4x2x3	
G:       1926    GAGAGCCAGAACGCCTGGGAGTTGTTTGCTTTAAGAAATTTGATTTCAAG    1905      
                                       |||||||||||||X|||X|X||
T:               ----------------------TGTTTGCTTTAAGaAATtTgAT------
R:         23   T20020103030313231232131110013200302100320023321012    44        
--
>1_842_2041_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000122001331320111223    33        
--
>1_886_3639_F3	ENSMUST00000113126	-	2602	2617	23	38	50	160	16	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                       ||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAG------------
R:         23   T23322010322021000323203111011110111212232033231020    38        
--
>1_899_1296_F3	ENSMUST00000113126	-	1924	1946	20	42	50	170	6x11x3x3	
G:       1946    ACCTGGAGAGCACGCTGGAAAATGTACACTTTTGTTCTTTGTGCCTGGTT    1924      
                                    ||||||X||||||||||X||X||
T:               -------------------AAATGTaCACTTTTGTTcTTtGT--------
R:         20   T23302010300030231233003110111200011032021123202330    42        
--
>1_1882_3175_F3	ENSMUST00000113126	+	2593	2623	11	41	50	176	4x1x3x1x2T13x6	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                           ||||XX||XX| |||||||||||||X|||||
T:               ----------CCCAgcACccTTACACCACACCACAcCTCTG---------
R:         11   T23302010300001021123203111011110111302221211103210    41        
--
>1_1890_157_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	12x4x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       ||||||||||||X|||X|||||
T:               ----------------------ACACCACACCACaCCTcTGTCT------
R:         23   T23332010301301032123033111011110113102321122132113    44        
--
>1_2483_4252_F3	ENSMUST00000113126	+	113	136	15	38	50	160	5x4x2x10x3	
G:        113    CACGTGACCAGTGATGACACAGGAATGTGTGAGATGGTTCTCATTGATCA    136       
                               |||||X|||X|X|||||||||X||
T:               --------------TGACAcAGGaAtGTGTGAGATgGT------------
R:         15   T03230201030333112112120300111112223201330123203110    38        
--
>1_2693_2485_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	16x3x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       ||||||||||||||||X||X||
T:               ----------------------ACACCACACCACACCTcTGtCT------
R:         23   T23302010303302031123203111011110111102321322222110    44        
--
>1_3951_4493_F3	ENSMUST00000113126	-	483	511	14	42	50	190	1x4x4x2x15x3	
G:        511    CTGCTGCTGCTGCTTATTCAGCTGCAGAGGGCACTGCTCCAGCTGCTATA    483       
                              |X|||X|||X|X||||||||||||||X||
T:               -------------TtATTcAGCtGcAGAGGGCACTGCTCcAG--------
R:         14   T00133031111200233011233111222003112132231232323122    42        
--
>1_4279_4392_F3	ENSMUST00000113126	-	2069	2099	9	39	50	190	1x8x1x2x14x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X|||||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTaAtCT-----------
R:          9   T00133031111222232031110111232000111002230211310221    39        
--
>2_447_3274_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	1x4x3x13x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |X|||X||X||||||||||||X||
T:               --------------GaCAGaGGtGTGGTGTGGTGTcAG------------
R:         15   T23102010301000001123203111011110111312210002303212    38        
--
>2_611_573_F3	ENSMUST00000113126	-	2600	2625	14	39	50	180	2x3x3x8x10	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                              ||X||X||X|||||||X|||||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGGG-----------
R:         14   T10320103031313231232031110111201112120000333310301    39        
--
>2_1655_2783_F3	ENSMUST00000113126	+	2598	2626	16	44	50	196	3x1x2T19x3	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                |||XX| |||||||||||||||||||X||
T:               ---------------CACccTTACACCACACCACACCTCTGtCT------
R:         16   T23302010301201021123203111011110111102221222203120    44        
--
>2_1928_1388_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111232232031110111232300113011112333220222    36        
--
>2_2497_1869_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	4x3x12x2x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                ||||X||X|||||||||||X|X|||
T:               ---------------ACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         16   T23321010320301001123203111011110113202003320230013    40        
--
>2_2754_3024_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	x5x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               X||||X||X|||||||||||||X|||
T:               --------------gACAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23302010303001321123203111011110111202000321200022    40        
--
>2_3107_1033_F3	ENSMUST00000113126	+	2594	2621	12	39	50	172	3T3x1x2T17	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            ||| |||XX| |||||||||||||||||
T:               -----------CCATCACccTTACACCACACCACACCTC-----------
R:         12   T21101010300301321123203111011110111102232301222230    39        
--
>2_3275_2058_F3	ENSMUST00000113126	-	2595	2617	23	45	50	156	14x2x2C4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                       ||||||||||||||X|X| ||||
T:               ----------------------TGTGGTGTGGTGTCaGgGCGCTG-----
R:         23   T23302010323201021323203111011110111202303332122322    45        
--
>2_3371_1328_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T23302010300003302323203111011110111302221233323132    41        
--
>2_3579_4603_F3	ENSMUST00000113126	-	2600	2621	22	43	50	180	5x4x13	
G:       2621    AAGAAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                      |||||X|||X||||||||||||
T:               ---------------------GAGGTgTGGtGTGGTGTCAGGG-------
R:         22   T10000301033020000031312201211031110111212003230000    43        
--
>2_3794_1763_F3	ENSMUST00000113126	-	2593	2623	17	47	50	196	3x3x11x5A5x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                 |||X||X||||||||||X|||| |||||X||
T:               ----------------CAGaGGtGTGGTGTGGTgTCAGAGTGCTgGG---
R:         17   T23302010321001002123203111011110121212221132000222    47        
--
>2_3827_1187_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23101010320003300113203111011110111102220203220010    40        
--
>3_273_3852_F3	ENSMUST00000113126	+	2588	2623	6	41	50	172	1x2x3G1x5x1x2T12x7	
G:       2588    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                      |X|X|| |X||||XX| ||||||||||||X||||||
T:               -----AgGtACGCaGCACccTTACACCACACCACaCCTCTG---------
R:          6   T23300100031333231113203111011110112102221333121102    41        
--
>3_1837_3906_F3	ENSMUST00000113126	+	2600	2625	18	43	50	186	2x2T11x10	
G:       2600    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                  ||X| |||||||||||X|||||||||
T:               -----------------CCcTTACACCACACCAcACCTCTGTC-------
R:         18   T13122101122002330203203111011110131102221120020202    43        
--
>3_1873_4598_F3	ENSMUST00000113126	-	2074	2099	9	34	50	160	1x3x5x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X||X||||XX|X|||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111232232031110111232000110311202020033303    34        
--
>3_1969_403_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111232232031110111232003113011110000313133    36        
--
>3_4032_791_F3	ENSMUST00000113126	-	2590	2615	19	44	50	166	1x2x9x10T3	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTACCCCTCA    2590      
                                   |X|X||||||||X||||||||| |||
T:               ------------------TgGtGTGGTGTCaGGGTGCTGGTTAC------
R:         19   T13310103031313231232031110111202001132101031222020    44        
--
>3_4119_2010_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	2x3x3x12x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X|||||||||||X|||
T:               --------------GAcAGaGGtGTGGTGTGGTGtCAG------------
R:         15   T23302010302301323123203111011110113212232222331122    38        
--
>4_229_3786_F3	ENSMUST00000113126	+	2590	2615	8	33	50	180	1x3x6x5x11	
G:       2590    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                        |X||X|||||X||||X||||||||||
T:               -------GtACcCAGCAcCCTGaCACCACACCA-----------------
R:          8   T102000130313012312002131110111101021112120213001.2    33        
--
>4_282_2066_F3	ENSMUST00000113126	-	80	102	26	48	50	170	13x2x5x3	
G:        102    TGCTCTGTATTTGAATTTTTAGCAACGTGTGACTGTCGAATATGAGCTAT    80        
                                          |||||||||||||X|X||||X||
T:               -------------------------CGTGTGACTGTCGaAtATGAgCT--
R:         26   T030302010303131123121202333111121211233023312332.1    48        
--
>4_633_2208_F3	ENSMUST00000113126	-	2593	2620	15	42	50	180	2x3x1x2x9x11	
G:       2620    CTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAATCCCTC    2593      
                               ||X||XX|X||||||||X||||||||||
T:               --------------AGgTGtgGtGTGGTGTCaGGGTGCTGGG--------
R:         15   T212310103030313221132031110111202001132100000003.0    42        
--
>4_1075_3551_F3	ENSMUST00000113126	+	2610	2630	30	50	50	180	13x8	
G:       2610    AAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACAC    2630      
                                              |||||||||||||X|||||||
T:               -----------------------------ACACCACACCTCTgTCTACAC
R:         30   T112203012302030303133132123213111011110222312231.0    50        
--
>4_1211_3971_F3	ENSMUST00000113126	-	2594	2612	18	36	50	170	16x3	
G:       2612    CAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGAAATCCCTCAAAGA    2594      
                                  ||||||||||||||||X||
T:               -----------------TGTGGTGTCAGGGTGCtGG--------------
R:         18   T010303011123123203111011121200113110122302003002.1    36        
--
>4_2983_4723_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T001330311112222320311101112320001110113302220033.2    34        
--
>4_3735_4630_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T001330311112222320311101112320001110001112231121.2    34        
--
>4_4182_4354_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T231020103030113103232031110111101111022223213320.0    40        
--
>4_4272_4522_F3	ENSMUST00000113126	-	2060	2099	9	48	50	166	1x3x5x1x2x13x3x2C1x1x4x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X||||||||||||X||X| |XX|||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAtCCGccTGTtCA--
R:          9   T001330311112322320311101112320001030020301211321.2    48        
--
>5_309_1024_F3	ENSMUST00000113126	-	2604	2631	9	36	50	166	3x1x2A4x3x14	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                         |||XX| ||||X||X|||||||||||||
T:               --------GGTgtAAACAGaGGtGTGGTGTGGTGTC--------------
R:          9   T23112010301303001123203111011110111200323023230103    36        
--
>5_1551_1311_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111232232031110111232300113001130221100132    36        
--
>5_2308_4530_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	2x12x8	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       ||X|||||||||||X|||||||
T:               ----------------------ACaCCACACCACACcTCTGTCT------
R:         23   T23332210112010300233203121011110111122221122220233    44        
--
>5_2344_2212_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23102010320201021123203111011110111102223133123122    40        
--
>5_4304_2456_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111232232031110111232003113000130223000212    36        
--
>6_314_4968_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111222232031110111232300113020030323212302    36        
--
>6_1975_488_F3	ENSMUST00000113126	-	2602	2624	16	38	50	190	4x3x16	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                ||||X||X|||||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCAG------------
R:         16   T13311010303300001123203111011110111212230103012133    38        
--
>6_2167_1088_F3	ENSMUST00000113126	-	85	116	10	41	50	180	2x4x3x2x2x13x3x3	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    85        
                          ||X|||X||X|X|X||||||||||||X||X||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCgAAtAT---------
R:         10   T23302010331313231230222131111212112120233323231322    41        
--
>6_2176_4011_F3	ENSMUST00000113126	+	2594	2627	12	45	50	172	3x1x3x1x2T13x5T4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                            |||XX||XX| |||||||||||||X|||| ||||
T:               -----------CCAgcACccTTACACCACACCACAcCTCTTTCTA-----
R:         12   T23102010323301021123203111011110111202220022333302    45        
--
>6_2176_4011_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23102010323301021123203111011110111202220022333302    36        
--
>6_2207_2741_F3	ENSMUST00000113126	-	2602	2628	12	38	50	176	3T2x2x3x16	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                            ||| ||X|X||X|||||||||||||||
T:               -----------GTATACaGaGGtGTGGTGTGGTGTCAG------------
R:         12   T01322010302313331223203111011110111212230000212031    38        
--
>6_2536_3722_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010303201321123203111011110111200330221121121    36        
--
>6_2695_4221_F3	ENSMUST00000113126	+	2601	2625	19	43	50	176	1x2T18x3	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                   |X| ||||||||||||||||||X||
T:               ------------------CcTTACACCACACCACACCTCTgTC-------
R:         19   T02130211030313012323203111011110111102220123123111    43        
--
>6_2710_1187_F3	ENSMUST00000113126	-	2602	2622	21	41	50	170	10x2x9	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                     ||||||||||X|X||||||||
T:               --------------------AGAGGTGTGGtGtGGTGTCAG---------
R:         21   T02321120232020300033022201111031210111212233302222    41        
--
>6_4194_891_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000101133330101132221    33        
--
>7_949_1289_F3	ENSMUST00000113126	+	2596	2626	14	44	50	190	4x3x2x2x6x11x3	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                              ||||X||X|X|X|||||X||||||||||X||
T:               -------------AGCAcCCtGaCaCCACAcCACACCTCTGtCT------
R:         14   T23102010331313231200013101011120111102221322013021    44        
--
>7_1457_2533_F3	ENSMUST00000113126	-	2605	2628	12	35	50	180	1x7x3x13	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                            |X||||||X||X||||||||||||
T:               -----------GtAGACAGaGGtGTGGTGTGGTGT---------------
R:         12   T23302010300303221123203111011110111130123110120032    35        
--
>7_1702_3128_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x5x12	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||||X|||||||||||
T:               -------------AgACAGaGGTGtGGTGTGGTGTC--------------
R:         14   T23102010303101021123201131011110111202200333322200    36        
--
>7_1763_2141_F3	ENSMUST00000113126	+	2601	2628	19	46	50	180	1x2x13x6x2x4	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                   |X|X||||||||||||X|||||X|X|||
T:               ------------------CcTgACACCACACCACaCCTCTgTcTAC----
R:         19   T23302010320331021113202111011110113102222102310232    46        
--
>7_2451_2298_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111202232031110111232003113010030013300032    36        
--
>7_2687_4812_F3	ENSMUST00000113126	-	2588	2612	18	42	50	210	19x2x4	
G:       2612    CAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCTCTCAAAGA    2588      
                                  |||||||||||||||||||X|X|||
T:               -----------------TGTGGTGTCAGGGTGCTGGgTaCCT--------
R:         18   T01030301112312320311101112120011321011010231221222    42        
--
>7_2989_4783_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23302010320303020123203111011110111210323321223300    37        
--
>7_3092_2562_F3	ENSMUST00000113126	+	2594	2616	12	34	50	150	3x4x4x2x10	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                            |||X|||X|||X|X|||||||||
T:               -----------CCAgCACcCTGaCaCCACACCAC----------------
R:         12   T23102010321101331120213131011110113231331332222022    34        
--
>7_3622_1752_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T33302010301000000123203111011110111102222113123111    40        
--
>7_3773_4493_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111222232031110111232000313011030321201322    36        
--
>8_2095_1857_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x8x1x2x11x2x3x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X||||||||||X|X||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAAtCT-----------
R:          9   T00133031111222232031110111232003133002221212322002    39        
--
>8_2411_3115_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	x8x1x2x13x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          X|||||||XX|X||||||||||||X||
T:               ---------tGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:         10   T00133231111222232031110111232000133001231010200232    36        
--
>8_2459_2996_F3	ENSMUST00000113126	+	2587	2620	5	38	50	166	4x1x5x4x1x2T11x2x3	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                     ||||XX||||X|||XX| |||||||||||X|X||
T:               ----AAGGtaCCCAgCACccTTACACCACACCAcAcCT------------
R:          5   T23332020301001331123203111011110101302300303231033    38        
--
>8_3017_926_F3	ENSMUST00000113126	+	2604	2623	22	41	50	180	1x19	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                      |X||||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCTG---------
R:         22   T20201030313112312012303111011110111102221332122122    41        
--
>8_4242_1503_F3	ENSMUST00000113126	-	2058	2099	9	50	50	206	1x8x1x2x14x2x3A2x1x4x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2058      
                         |X|||||||XX|X|||||||||||||X|X|| ||XX|||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTaAtCTACCtgTTCaAT
R:          9   T00133031111222232031110111232000111002231000102303    50        
--
>9_2004_3439_F3	ENSMUST00000113126	-	2593	2614	17	38	50	200	2x20	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAG    2593      
                                 ||X|||||||||||||||||||
T:               ----------------GGtGTGGTGTCAGGGTGCTGGG------------
R:         17   T0013303111120223203111011121200113210003023221011.    38        
--
>9_3462_560_F3	ENSMUST00000113126	+	2607	2632	20	45	50	160	1x2x14x4x2x3	
G:       2607    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2632      
                                    |X|X|||||||||||||X|||X|X||
T:               -------------------AcCaCACCACACCTCTGtCTAcAcCA-----
R:         20   T2030010003130003130320311101111022210223013010221.    45        
--
>9_3997_2459_F3	ENSMUST00000113126	-	2593	2615	26	48	50	170	1x15x4x3	
G:       2615    GAAATTCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                          |X||||||||||||||X|||X||
T:               -------------------------TgGTGTGGTGTCAGGGtGCTgGG--
R:         26   T1031212330201030333112330320111101112120001322002.    48        
--
>10_435_2673_F3	ENSMUST00000113126	-	2072	2099	9	36	50	166	1x3A4x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|| ||||XX|X|||||||||||||||
T:               --------CtGAAAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T0233303111120023203111011123200011300001032.31211.    36        
--
>10_1762_4515_F3	ENSMUST00000113126	-	2061	2099	9	47	50	186	1x3x5x1x2x11x5C3x3x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X||X||||XX|X||||||||||X|||| |||X||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAACCTGcCTgTTC---
R:          9   T0013303111123223203111011123200311301021002.30201.    47        
--
>10_3644_4034_F3	ENSMUST00000113126	-	2592	2614	16	38	50	190	2x13x8	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAGA    2592      
                                ||X||||||||||||X|||||||
T:               ---------------GGtGTGGTGTCAGGGtGCTGGGT------------
R:         16   T0103032111231232031110111212000132100102311.12222.    38        
--
>11_1359_1392_F3	ENSMUST00000113126	-	2595	2615	21	41	50	170	1x13x7	
G:       2615    TCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGAAAATCCCT    2595      
                                     |X||||||||||||X||||||
T:               --------------------TgGTGTGGTGTCAGgGTGCTG---------
R:         21   T02130201030303312312020111101112121011321223220320    41        
--
>12_815_648_F3	ENSMUST00000113126	-	2599	2626	14	41	50	180	1x5x3x11x5x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                              |X||||X||X||||||||||X||||X||
T:               -------------AgACAGaGGtGTGGTGTGGTgTCAGgGT---------
R:         14   T23301010303331121123203111011110121212201300000101    41        
--
>12_1203_2604_F3	ENSMUST00000113126	-	2590	2614	17	41	50	190	2x13x5x5	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCCCTCAAAG    2590      
                                 ||X||||||||||||X||||X||||
T:               ----------------GGtGTGGTGTCAGGGtGCTGgGTAC---------
R:         17   T22133031011203232031110111212000132110131212122013    41        
--
>13_934_2449_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x3x5x1x2x7x2x10	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X||||||X|X|||||||||
T:               --------CtGAgAGCTccAaCCACAGcTtTTGTAATCT-----------
R:          9   T00133031111202232031110111212100113032201121300102    39        
--
>13_966_1179_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111232232031110111232000113001330223202120    36        
--
>13_1135_4995_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000111100220023110222    34        
--
>13_3611_1031_F3	ENSMUST00000113126	-	2590	2614	17	41	50	190	2x13x3x7	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCCCTCAAAG    2590      
                                 ||X||||||||||||X||X||||||
T:               ----------------GGtGTGGTGTCAGGGtGCtGGGTAC---------
R:         17   T33133031211201232031110111212000131100131322232230    41        
--
>13_3923_2693_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x5x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X||||X||||
T:               -----------------CAGaGGTGTGGTGTgGTGTcAGGG---------
R:         18   T02330201030313112312320111101112011101200231230322    41        
--
>13_4058_2600_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111232232031110111232003113000120233302010    36        
--
>13_4169_3683_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x8x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||X|||||||
T:               --------CtGAgAGCTccAaCCACAGCtTTTGTAA--------------
R:          9   T00133031111202232031110111233000113010233322201321    36        
--
>14_2105_3445_F3	ENSMUST00000113126	-	2594	2618	22	46	50	170	1x2x14x4x4	
G:       2618    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                      |X|X|||||||||||||X|||X|||
T:               ---------------------GtGtGGTGTGGTGTCAGgGTGcTGG----
R:         22   T13021031011212312033032131011110111212301112102301    46        
--
>14_4294_1087_F3	ENSMUST00000113126	-	1431	1463	6	38	50	176	3x1x5x2x2x1x1C17	
G:       1463    CAAAGTGCGTCGGACTCGAAGTACAGGTGCTTGTAGTCGAAGGAGAAGAA    1431      
                      |||XX||||X|X|XX |||||||||||||||||
T:               -----TGCgtCGGAcTcGaaCTACAGGTGCTTGTAGTC------------
R:          6   T21132313102302223303123112011320113212020332310202    38        
--
>15_1697_4300_F3	ENSMUST00000113126	-	2070	2098	15	43	50	170	3x1x4x1x2x7x11	
G:       2098    ATGGATTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAG    2070      
                               |||XX|||XX|X||||||X||||||||||
T:               --------------TGAgaGCTccAaCCACAGcTTTTGTAATC-------
R:         15   T02330201030313312312320311101112120001130323032201    43        
--
>15_2349_2534_F3	ENSMUST00000113126	-	2592	2612	22	42	50	170	15x2x4	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2592      
                                      |||||||||||||||X|X|||
T:               ---------------------TGTGGTGTCAGGGTGcTgGGT--------
R:         22   T23302010132313231232031110111212001122000122330202    42        
--
>17_129_2289_F3	ENSMUST00000113126	-	2599	2625	16	42	50	190	2x3x3x8x11	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||X|||||||X||||||||||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGGGT--------
R:         16   T0233020103031331231232031110111201112120012.322..1    42        
--
>17_291_4462_F3	ENSMUST00000113126	-	2061	2099	9	47	50	180	1x3x5x1x2x7x9x2x2x3x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X||X||||XX|X||||||X||||||||X|X|X||X|||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAAtCtGcCTgTTC---
R:          9   T0013303111123223203111011122200011302231002.302..2    47        
--
>17_868_1454_F3	ENSMUST00000113126	+	2598	2627	16	45	50	216	3x3T13x10	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                |||X|| |||||||||||||X|||||||||
T:               ---------------CACcCTTACACCACACCACAcCTCTGTCTA-----
R:         16   T2333201210320002112020311101111011120222112.221..3    45        
--
>17_1771_1815_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T0013303111122223203111011123200011100300032.302..0    34        
--
>17_1803_3489_F3	ENSMUST00000113126	-	2061	2099	9	47	50	172	1x8x1x2x11x2x4A1A1x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X|||||||XX|X||||||||||X|X||| | |X|||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAATATACcTGTTC---
R:          9   T0013303111122223203111011123200310303333132.202..1    47        
--
>17_2110_2276_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x10x8	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||X|||||||
T:               -------------------AGGtGTGGTGTGGtGTCAGGG----------
R:         20   T1030001030333102312320311101111031121200323.313..2    40        
--
>17_3117_2278_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	x3x3x17	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 X||X||X||||||||||||||||
T:               ----------------cAGaGGtGTGGTGTGGTGTCAGG-----------
R:         17   T1330201030020003012320311101111011121201003.222..3    39        
--
>18_900_2680_F3	ENSMUST00000113126	-	2226	2246	12	32	50	190	10x11	
G:       2246    GGGGAGGTCGAACGCACGCACGCACCCACGCATTCCAATGAGCCCATTCA    2226      
                            ||||||||||X||||||||||
T:               -----------ACGCACGCACgCACCCACGCA------------------
R:         12   T31233020111013311331113110011331232102212221301221    32        
--
>19_1499_1048_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	3x5x1x2x12x4	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X|||||||||||X|||
T:               ---------TGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:         10   T001333311112022320311101112320000130100200233210.2    36        
--
>19_3206_424_F3	ENSMUST00000113126	-	2598	2622	21	45	50	170	2x3x5x11x4	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGAAAAA    2598      
                                     ||X||X||||X||||||||||X|||
T:               --------------------AGaGGtGTGGtGTGGTGTCAGgGTG-----
R:         21   T020003300330203000330232031110311101112122011222.2    45        
--
>20_635_4213_F3	ENSMUST00000113126	-	2071	2098	9	36	50	166	3x1x3C1x14x5	
G:       2098    TCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTTG    2071      
                         |||XX|| |X|||||||||||||X||||
T:               --------TGAgaGCCCcAACCACAGCTTTTgTAAT--------------
R:          9   T01030333112312300310101112320000130331112221302322    36        
--
>21_1238_3160_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113001320221112232    36        
--
>21_3000_4877_F3	ENSMUST00000113126	+	2763	2785	27	49	50	190	5x10x8	
G:       2763    ATTGTGTCTAAGCATCTCAGAGTCAAGTGTGCTTCTTTGCAAAGGGGTCG    2785      
                                           |||||X|||||||||X|||||||
T:               --------------------------GTGTGcTTCTTTGCAaAGGGGTC-
R:         27   T11233022103013312233232131111111202200131102000120    49        
--
>21_4028_1363_F3	ENSMUST00000113126	-	1816	1841	10	35	50	160	2x2x1x7x9x5	
G:       1841    ACAGGATATCACGGCTGAGCAGCACTCAGCCCCTCTCAAAGTCAGCATGA    1816      
                          ||X|XX||||||X||||||||X||||
T:               ---------CAcGgcTGAGCAgCACTCAGCcCCTC---------------
R:         10   T23302010301331121223103112212310022102310332200033    35        
--
>22_72_3321_F3	ENSMUST00000113126	-	2595	2629	12	46	50	190	2x2x2x3x11x2x4x2x7	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                            ||X|X|X||X||||||||||X|X|||X|X||||||
T:               -----------TGtAgAcAGaGGTGTGGTGTgGtGTCaGgGTGCTG----
R:         12   T02230201030313312312320111101112021122230113212221    46        
--
>22_532_2853_F3	ENSMUST00000113126	-	77	117	9	49	50	182	1x2x4x3A1G3x1x5x3x12x4	
G:        117    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGAG    77        
                         |X|X|||X|| | |||XX||||X||X|||||||||||X|||
T:               --------TgTcATCaCTAGGCACgtGTGAcTGtCGAATATGAGCtAGA-
R:          9   T23120103031313231232031110111202122320333122333223    49        
--
>22_685_3680_F3	ENSMUST00000113126	-	2598	2622	18	42	50	170	x5x14x2x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                  X||||X|||||||||||||X|X|||
T:               -----------------aGAGGtGTGGTGTGGTGTCaGgGTG--------
R:         18   T01302010303011323222203111011110111202301102331132    42        
--
>22_1088_3089_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	8x10x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||||||||X|||||||||X|X|||
T:               --------------GACAGAGGtGTGGTGTGGtGtCAG------------
R:         15   T20302010313031021122202111011110212212311203332133    38        
--
>22_1198_774_F3	ENSMUST00000113126	-	2421	2465	2	46	50	188	x3x2x4x1A1x7A3x4x1C10x6	
G:       2465    TGCGTCTGGCTCCACAGCAGGCACCGGTAAGAGGATTGGAGATAGGCTCC    2421      
                  X||X|X|||X |X|||||| |||X|||X ||||||||||X|||||
T:               -gCGtCtGGCtACaCAGCAGACACcGGTaCGAGGATTGGAgATAGG----
R:          2   T03330201030313112312211113011132202301021233202121    46        
--
>22_1859_3012_F3	ENSMUST00000113126	-	2599	2623	18	42	50	170	3x3x8x2x9	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |||X||X|||||||X|X||||||||
T:               -----------------CAGaGGtGTGGTGTgGtGTCAGGGT--------
R:         18   T02330201030313112312320311101112021121200122330022    42        
--
>22_2463_3533_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111232232031110111232000313003130033212133    36        
--
>22_3701_2632_F3	ENSMUST00000113126	-	2592	2620	20	48	50	170	3x7x9x2x1x3x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2592      
                                    |||X||||||X||||||||X|XX||X|||
T:               -------------------AGGtGTGGTGtGGTGTCAGgGtgCTgGGT--
R:         20   T11123230020303001313203111011310111212203032000100    48        
--
>22_3796_2060_F3	ENSMUST00000113126	+	2591	2621	9	39	50	170	3x1x7x1x1x1x2x15	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                         |||XX||||||XXXX|X||||||||||||||
T:               --------TACccAGCACCctgaCaCCACACCACACCTC-----------
R:          9   T13003100031311231103001131011110111102232131303211    39        
--
>23_845_3665_F3	ENSMUST00000113126	-	2595	2615	19	39	50	170	12x5x4	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGAAAATCCCTCA    2595      
                                   ||||||||||||X||||X|||
T:               ------------------TGGTGTGGTGTCaGGGTgCTG-----------
R:         19   T31020103031313231231011110111202001332110000000311    39        
--
>23_1353_2790_F3	ENSMUST00000113126	-	719	753	2	36	50	190	2x1x4x6x10x2x1x2x7	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  ||XX|||X|||||X|||||||||X|XX|X||||||
T:               -CAgcAATaTGCAGgCAGTAGGCAcTgaCaTTGTCA--------------
R:          2   T13130103031312231213203102011230112102233133100312    36        
--
>23_4206_1449_F3	ENSMUST00000113126	-	2591	2615	16	40	50	170	1x2x13x5x4	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                |X|X||||||||||||X||||X|||
T:               ---------------TgGtGTGGTGTCAGGGtGCTGgGTA----------
R:         16   T00133031111232232031110111212003132110130202012310    40        
--
>24_1499_2202_F3	ENSMUST00000113126	+	2595	2619	13	37	50	170	1x4x5x12x3	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                             |X|||X||||X|||||||||||X||
T:               ------------CaGCAcCCTGaCACCACACCACaCC-------------
R:         13   T23100100001313231200213111011110112100301133320132    37        
--
>24_1850_2779_F3	ENSMUST00000113126	+	2913	2929	34	50	50	150	6x11	
G:       2913    TTATTTGTAGCTTGCTCTGTATTTGAATTTTTAGCAATTTTATATTTAGA    2929      
                                                  ||||||X||||||||||
T:               ---------------------------------GCAATTtTATATTTAGA
R:         34   T13200103031311231213330102333222113103030333300322    50        
--
>24_2668_1834_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x7x2x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||X|X|||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAAT-------------
R:          9   T00133031111222232031110111202100113031031202230030    37        
--
>25_782_4146_F3	ENSMUST00000113126	-	2591	2615	19	43	50	170	1x2x11x2x9	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2591      
                                   |X|X||||||||||X|X||||||||
T:               ------------------TgGtGTGGTGTCAGgGtGCTGGGTA-------
R:         19   T13020103031313231232031110111212302132100133120012    43        
--
>25_1010_3152_F3	ENSMUST00000113126	-	80	106	21	47	50	176	12x6T3x2x3	
G:        106    GCTCTGTATTTGAATTTTTAGTCACGTGTGACTGTCGAATATGAGCTATT    80        
                                     ||||||||||||X||||| |||X|X||
T:               --------------------GTCACGTGTGACtGTCGATTATgAgCT---
R:         21   T23302010303131123123312113111121311232303332332233    47        
--
>25_3933_4827_F3	ENSMUST00000113126	-	2589	2612	22	45	50	180	9x2x7x6	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCCCTCA    2589      
                                      |||||||||X|X||||||X|||||
T:               ---------------------TGTGGTGTCaGgGTGCTGgGTACC-----
R:         22   T13310101031310231232031110111202301132110131013201    45        
--
>25_4265_2455_F3	ENSMUST00000113126	-	2602	2631	9	38	50	180	1x2x4x2x2x5x14	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                         |X|X|||X|X|X||||X|||||||||||||
T:               --------GgTgTAGaCaGaGGTGtGGTGTGGTGTCAG------------
R:          9   T23302100031313231223201131011110111212230320220110    38        
--
>26_467_2322_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113000310302311211    36        
--
>26_2301_1253_F3	ENSMUST00000113126	-	2073	2098	15	40	50	180	3x1x7x9x6	
G:       2098    ATGGATTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAG    2073      
                               |||XX||||||X||||||||X|||||
T:               --------------TGAgaGCTCCAaCCACAGCTtTTGTA----------
R:         15   T31330201030313312312322011101112321001133133211322    40        
--
>26_2424_2170_F3	ENSMUST00000113126	-	2601	2626	14	39	50	180	3x3x3x13x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                              |||X||X||X||||||||||||X|||
T:               -------------AGAcAGaGGtGTGGTGTGGTGTcAGG-----------
R:         14   T23302010300331220123203111011110111312020332130000    39        
--
>26_2449_3055_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	5x3x10x2x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||X|X||||
T:               --------------GACAGaGGtGTGGTGTGGtGtCAGG-----------
R:         15   T23302010303001121123203111011110212212032032232032    39        
--
>26_3243_2448_F3	ENSMUST00000113126	-	2607	2627	13	33	50	170	2x8x11	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTACTGTTTGAAAAAAAAT    2607      
                             ||X|||||||X||||||||||
T:               ------------TAgACAGAGGtGTGGTGTGGT-----------------
R:         13   T23302010300023321122202111011110133233000311213021    33        
--
>26_3310_1934_F3	ENSMUST00000113126	+	2628	2658	11	41	50	156	1x2x2x12C2x6x2x3	
G:       2628    CCTCTGTCTACACCAGATGCCTCTGCAGACCTCACCATGGTCCCGCCTGT    2658      
                           |X|X|X||||||||||| ||X|||||X|X||
T:               ----------CaCcAgATGCCTCTGCACACcTCACCaTgGT---------
R:         11   T10030201030313112313022213111112211003301323312210    41        
--
>26_3399_4450_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111222232031110111232000133000130212012012    36        
--
>26_3734_1314_F3	ENSMUST00000113126	-	2592	2614	20	42	50	190	2x13x8	
G:       2614    TAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2592      
                                    ||X||||||||||||X|||||||
T:               -------------------GGtGTGGTGTCAGGGtGCTGGGT--------
R:         20   T11220103032313231232031110111212000132100102300031    42        
--
>27_149_3382_F3	ENSMUST00000113126	-	2599	2624	16	41	50	180	1x3x3x10x9	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                |X||X||X|||||||||X||||||||
T:               ---------------AcAGaGGtGTGGTGTGGtGTCAGGGT---------
R:         16   T23302010103313013123203111011110211212001013003021    41        
--
>27_1613_397_F3	ENSMUST00000113126	-	2072	2094	19	41	50	170	4x3x9x7	
G:       2094    ATGGATTCTCCCTTATCCAGCTCCAACCACAGCTTTTGTAAATGAAGGAG    2072      
                                   ||||X||X||||||||X||||||
T:               ------------------AGCTcCAaCCACAGCTtTTGTAA---------
R:         19   T02330201030313112312320011101112321001130133312112    41        
--
>27_1790_3314_F3	ENSMUST00000113126	+	2586	2621	4	39	50	178	3x2x1x1G7x1G1T17	
G:       2586    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                    |||X|XX |||||||X | |||||||||||||||||
T:               ---CAAgGtaGCCAGCACcGTTACACCACACCACACCTC-----------
R:          4   T23301010302301231123103111011110111102211211012320    39        
--
>28_312_4391_F3	ENSMUST00000113126	-	2595	2620	21	46	50	180	2x1x8x11x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     ||XX|||||||X||||||||||X|||
T:               --------------------AGgtGTGGTGTgGTGTCAGGGTgCTG----
R:         21   T01233201030313112312322011101112011121200133212212    46        
--
>28_777_4066_F3	ENSMUST00000113126	-	2070	2094	19	43	50	176	4G2x9x9	
G:       2094    ATGGATTCTCCCTTATCCAGCTCCAACCACAGCTTTTGTAATCGAAGGAG    2070      
                                   |||| ||X||||||||X||||||||
T:               ------------------AGCTGCAaCCACAGCTtTTGTAATC-------
R:         19   T10030201030313112312321311101112322001130321322021    43        
--
>28_2852_537_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x8x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||X|||||||
T:               --------CtGAgAGCTccAaCCACAGCtTTTGTAA--------------
R:          9   T00133031111202232031110111233000113010030213303113    36        
--
>29_339_4176_F3	ENSMUST00000113126	+	2601	2624	20	43	50	180	3x12x2x7	
G:       2601    AAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACC    2624      
                                    |||X|||||||||||X|X||||||
T:               -------------------CCTgACACCACACCAcAcCTCTGT-------
R:         20   T31030201030313012313020211101111012130222110001212    43        
--
>29_2713_3575_F3	ENSMUST00000113126	-	2595	2623	18	46	50	176	3x3x8x2x6A6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                  |||X||X|||||||X|X||||| ||||||
T:               -----------------CAGaGGtGTGGTGTgGtGTCAGAGTGCTG----
R:         18   T02330201030313112312320311101112021121222113212020    46        
--
>30_1269_883_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302011302201321123203111011110111202232013203222    36        
--
>30_1294_4654_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	6x8x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  ||||||X|||||||X|||||||
T:               -----------------CAGAGGtGTGGTGTgGTGTCAG-----------
R:         18   T02330201030313112312220311101112011121223013002321    39        
--
>30_2954_3065_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	14x4x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  ||||||||||||||X|||X||
T:               -----------------CAGAGGTGTGGTGTgGTGtCA------------
R:         18   T02330201030313112312220111101112011021332233101110    38        
--
>30_3030_2217_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111232232031110111232000313022030303200103    36        
--
>31_811_3503_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x7x11	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||X||||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAATC------------
R:          9   T00133031111202232031110111222000113032310222301321    38        
--
>31_1255_3207_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113000210311012121    36        
--
>31_1564_3869_F3	ENSMUST00000113126	+	2248	2269	27	48	50	160	4x1x8x9	
G:       2248    TGCATGCGTGGGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTAGCCTTCTA    2269      
                                           ||||XX|||||||X||||||||
T:               --------------------------CGTGcgTGCGTGCgTAGCCTTC--
R:         27   T10301201030313112312333111031112113311311323020211    48        
--
>31_1657_1428_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113011220221330112    36        
--
>31_3315_3019_F3	ENSMUST00000113126	-	2599	2619	19	39	50	150	1x3x2x15	
G:       2619    ATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCC    2599      
                                   |X||X|X||||||||||||||
T:               ------------------GgTGtGgTGTGGTGTCAGGGT-----------
R:         19   T12323302010303031313113121111011121200133322301320    39        
--
>32_215_2241_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111222232031110111202000113011220010212221    36        
--
>32_785_2501_F3	ENSMUST00000113126	-	2595	2623	18	46	50	176	3x3x8x8x2G4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                  |||X||X|||||||X|||||||X| ||||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGgGGGCTG----
R:         18   T02130201030313312312320311101112011121230003212223    46        
--
>32_1695_4097_F3	ENSMUST00000113126	-	2591	2613	24	46	50	170	1x9x2x11	
G:       2613    TTCTAAACAATCAGCCCAGGAGTGTGTGGTGTCAGGGTGCTGGGTATCCC    2591      
                                        |X||||||||X|X||||||||||
T:               -----------------------GtGTGGTGTCaGgGTGCTGGGTA----
R:         24   T33233020103031311231232131110111202101132100130123    46        
--
>32_2929_3643_F3	ENSMUST00000113126	-	2596	2625	14	43	50	180	2x3x3x8x2x6x6	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                              ||X||X||X|||||||X|X|||||X|||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGgGTGCT-------
R:         14   T23302103031313231232031110111202112123011322300021    43        
--
>32_3087_4661_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000132020130213011031    33        
--
>32_3939_1668_F3	ENSMUST00000113126	-	2599	2625	16	42	50	190	2x3x11x7x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||||||||||X||||||X|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAgGGT--------
R:         16   T31330201030313312312320111101112011121100123320212    42        
--
>33_1304_1418_F3	ENSMUST00000113126	-	2608	2631	9	32	50	180	3x4x4x13	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGCACTGTTTGAAAAAAAAT    2608      
                         |||X|||X|||X||||||||||||
T:               --------GGTgTAGaCAGaGGTGTGGTGTGG------------------
R:          9   T23302010001313231123201111011110032200221333122122    32        
--
>33_2274_724_F3	ENSMUST00000113126	+	2589	2620	7	38	50	192	2x3x1A8T4x12	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                       ||X||X |||||||| ||||X|||||||||||
T:               ------GGtACcAAGCACCCTTACACcACACCACACCT------------
R:          7   T13020100031310231100203111311110111102023303101300    38        
--
>34_991_2428_F3	ENSMUST00000113126	+	2604	2629	22	47	50	186	13T5x1x6	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                      ||||||||||||| |||||XX|||||
T:               ---------------------GACACCACACCACTCCTCTgtCTACA---
R:         22   T22010301101123322313222111011110112202223222311332    47        
--
>34_1708_4220_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T23303011303113323123203111011110111210222023030022    37        
--
>34_1993_147_F3	ENSMUST00000113126	-	2593	2616	27	50	50	180	16x2x3x3	
G:       2616    AAGAAATTCTAAACAATCAGCCCAGGGTGGTGTGGTGTCAGGGTGCTGGG    2593      
                                           ||||||||||||||||X|X||X||
T:               --------------------------GTGGTGTGGTGTCAGGgTgCTgGG
R:         27   T20101000210020103033311231311011110111212031232200    50        
--
>34_3173_2354_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000112011230201111322    34        
--
>34_4179_3207_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000121000130320232103    33        
--
>35_2342_1391_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111202232031110111232300113010132023301303    36        
--
>35_2929_1870_F3	ENSMUST00000113126	+	1342	1371	21	50	50	200	4x1x4x15x1x5	
G:       1342    TAAGCAGAAACCCATCTCAATCGATTGTGACCTGCTCTGTGCCTGTGACC    1371      
                                     ||||XX|||X||||||||||||||XX||||
T:               --------------------TCGAttGTGaCCTGCTCTGTGCCTgtGACC
R:         21   T02130201030303032313023201111310213222111302201210    50        
--
>36_1228_148_F3	ENSMUST00000113126	+	2082	2104	28	50	50	190	5x5x13	
G:       2082    CATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAAGCA    2104      
                                            |||||X||||X||||||||||||
T:               ---------------------------TGTGGtTGGAgCTCTCAGAAGCA
R:         28   T01020201230310002313103113011110301023322221220231    50        
--
>36_1735_4274_F3	ENSMUST00000113126	-	2595	2620	20	45	50	160	3x10x6x2x1x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                    |||X|||||||||X|||||X|XX|||
T:               -------------------AGGtGTGGTGTGGtGTCAGgGtgCTG-----
R:         20   T03232211030303012313203111011110311212300332132223    45        
--
>37_407_4170_F3	ENSMUST00000113126	-	2601	2621	19	39	50	170	1x3x17	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                   |X||X||||||||||||||||
T:               ------------------GaGGtGTGGTGTGGTGTCAGG-----------
R:         19   T11123233020103032313203111011110111212020102030032    39        
--
>37_460_800_F3	ENSMUST00000113126	-	2596	2618	22	44	50	170	3x14x3x3	
G:       2618    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                      |||X|||||||||||||X||X||
T:               ---------------------GTGtGGTGTGGTGTCAGgGTgCT------
R:         22   T33123233020103031312231131011110111212201232330003    44        
--
>37_3673_213_F3	ENSMUST00000113126	-	2592	2612	29	49	50	170	13x4x4	
G:       2612    GAAATTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTA    2592      
                                             |||||||||||||X|||X|||
T:               ----------------------------TGTGGTGTCAGGGtGCTgGGT-
R:         29   T11230033002010300031123323100111011121200313230011    49        
--
>38_95_4585_F3	ENSMUST00000113126	-	2592	2615	27	50	50	160	1x2x9x8x4	
G:       2615    AGAAATTCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGT    2592      
                                           |X|X||||||||X|||||||X|||
T:               --------------------------TgGtGTGGTGTCaGGGTGCTgGGT
R:         27   T23000300030203030313111312320311101112220011323001    50        
--
>38_3605_2231_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	3x5x1x2x9x7	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X||||||||X||||||
T:               ---------TGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:         10   T02333031211202232031110111232300113010120232332232    36        
--
>39_210_4028_F3	ENSMUST00000113126	-	2043	2065	26	48	50	170	5x1x7x10	
G:       2065    AGACAACACAAAGGTCACCATGAAGTGTTCAATATGGGAACAGATTTTAA    2043      
                                          |||||XX||||||X|||||||||
T:               -------------------------TGTTCaaTATGGGaACAGATTTT--
R:         26   T20020103031313231232031110110202333100101122300012    48        
--
>39_2776_1690_F3	ENSMUST00000113126	-	2597	2620	20	43	50	160	3x10x6x2x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X|||||||||X|||||X|X||
T:               -------------------AGGtGTGGTGTGGtGTCAGgGtGC-------
R:         20   T10301010303213323223203111011110211212200133200022    43        
--
>41_607_286_F3	ENSMUST00000113126	-	2603	2624	16	37	50	180	4x3x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                ||||X||X||||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCA-------------
R:         16   T23301010302033001123203111011110111213030133030310    37        
--
>41_1970_2236_F3	ENSMUST00000113126	-	730	753	2	25	50	180	3x4x6x11	
G:        753    CCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                  |||X|||X|||||X||||||||||
T:               -CAGcAATaTGCAGgCAGTAGGCAC-------------------------
R:          2   T13120103031312231213203111011110131112221333112120    25        
--
>41_1997_1021_F3	ENSMUST00000113126	-	2605	2629	12	36	50	170	2x2x2x14x5	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAA    2605      
                            ||X|X|X|||||||||||||X||||
T:               -----------TGtAgAcAGAGGTGTGGTGTgGTGT--------------
R:         12   T02230201030313312312220111101112011100013130302021    36        
--
>41_3245_3931_F3	ENSMUST00000113126	-	287	326	7	46	50	186	2x2x2x3C3x1x2x2x10x8x4	
G:        326    GGCCACGAGTCGTTCTAATCTTTGAGCTGTGTTTGAGCGTCTTCTAAATC    287       
                       ||X|X|X|| |||XX|X|X|||||||||X|||||||X|||
T:               ------GAgTcGtTCCAATctTtGaGCTGTGTTTgAGCGTCTtCTA----
R:          7   T10211022011330201033003112321111000223312222233120    46        
--
>42_2357_2693_F3	ENSMUST00000113126	+	2067	2090	17	40	50	166	7x9T4x3	
G:       2067    TTCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGA    2090      
                                 |||||||X|||||||| ||||X||
T:               ----------------GCAGATTaCAAAAGCTTTGGTtGG----------
R:         17   T02330201030313112312230111000232001012100001030303    40        
--
>42_2445_3652_F3	ENSMUST00000113126	+	2607	2630	25	48	50	180	x11x5x8	
G:       2607    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                         X||||||||||X||||X|||||||
T:               ------------------------aCCACACCACAcCTCTgTCTACAC--
R:         25   T02111133020103031311233101011110111202223122311123    48        
--
>42_2624_3692_F3	ENSMUST00000113126	+	1688	1715	23	50	50	180	1x7x9x4x2x5	
G:       1688    TGGACCGGAGTCCACCAGCATCCTGTAGTGCCGAGACCCGCAGGCACAGG    1715      
                                       |X||||||X||||||||X|||X|X||||
T:               ----------------------CtGTAGTGcCGAGACCCgCAGgCaCAGG
R:         23   T11010303131123123203111011321110322210013121321120    50        
--
>42_2676_4389_F3	ENSMUST00000113126	+	9	27	4	22	50	170	14x5	
G:          9    GAGAAGAAAATAGCCTTTTAAAGAGACTGGCCCACAGAAAGGATGGCCTT    27        
                    ||||||||||||||X||||
T:               ---AAGAAAATAGCCTTtTAAA----------------------------
R:          4   T32200220003323020303003311201230031110111222222212    22        
--
>43_1874_823_F3	ENSMUST00000113126	+	536	557	12	33	50	180	13x6x3	
G:        536    TACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAA    557       
                            |||||||||||||X|||||X||
T:               -----------TGATGGCAAGGGTcATGTGgGT-----------------
R:         12   T01000310112112310310200131311130112010203211001332    33        
--
>43_3753_2727_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111202232031110111232300113003222322322303    36        
--
>44_92_3052_F3	ENSMUST00000113126	-	2069	2099	9	39	50	176	1x8x1x2x13C2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X|||||||||||| ||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGCAAtCT-----------
R:          9   T00133031111222232031110111232000131002220222331112    39        
--
>44_3869_2690_F3	ENSMUST00000113126	-	2070	2097	14	41	50	160	2x1x4x1x2x5x13	
G:       2097    GGATTCTCCCTTAGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGAT    2070      
                              ||XX|||XX|X||||X||||||||||||
T:               -------------GAgaGCTccAaCCACaGCTTTTGTAATC---------
R:         14   T20020103031313231232031110112232000113032100330223    41        
--
>44_4018_2372_F3	ENSMUST00000113126	-	415	437	21	43	50	170	2x15x2x4	
G:        437    AGAGCAAGCCCTGGGCAGAATTTGAGGGATTTTTTTTCAAACAACACCAC    415       
                                     ||X||||||||||||||X|X|||
T:               --------------------TTtGAGGGATTTTTTTTcAaACA-------
R:         21   T01030321112312331312101122002300000001130111233212    43        
--
>44_4059_454_F3	ENSMUST00000113126	-	2221	2255	7	41	50	202	4x1x9G11x1T1x6	
G:       2255    TGATGGCACGCACGCACGCACGCACGCACCCACGCATGCACATGAGCCCA    2221      
                       ||||XX|||||||| |||||||||||X |X|||||
T:               ------CACGcaCGCACGCAGGCACGCACCCAcTCaTGCAC---------
R:          7   T31213221130013311331203113311001222231311310102230    41        
--
>45_2447_2601_F3	ENSMUST00000113126	-	2604	2627	14	37	50	166	2x2T2x17	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                              ||X| ||X||||||||||||||||
T:               -------------TAgATAGaGGTGTGGTGTGGTGTC-------------
R:         14   T00130201030310302332320111101111011123321301322232    37        
--
>45_3045_3446_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x10x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||X|||||
T:               --------------GACAGaGGtGTGGTGTGGtGTCAG------------
R:         15   T20301010303331121123203111011110211212221230122013    38        
--
>46_1317_4383_F3	ENSMUST00000113126	+	112	138	23	49	50	176	1x2x14x5A4	
G:        112    CGACAGTCACACGTGACCAGTGATGACACAGGAATGTGTGAGATGGTTCT    138       
                                       |X|X|||||||||||||X|||| ||||
T:               ----------------------AtGaCACAGGAATGTGTgAGATAGTTC-
R:         23   T32230112322302010303031113111120203111122223321020    49        
--
>47_1207_3102_F3	ENSMUST00000113126	-	2767	2791	23	47	50	196	1x5T18	
G:       2791    AGTTCAGGGAAGCAGTGGTGAGTCAGTCGACCCCTTTGCAAAGAAGCCTG    2767      
                                       |X|||| ||||||||||||||||||
T:               ----------------------TcAGTCTACCCCTTTGCAAAGAAGC---
R:         23   T32010303231123123203111112122310002001310022023212    47        
--
>47_1537_2131_F3	ENSMUST00000113126	+	2588	2625	1	38	50	192	4x1x2x2x1x2G3T18x3	
G:       2588    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2625      
                 ||||XX|X|XX| ||| ||||||||||||||||||X||
T:               AGGTacCcAgcAGCCTTACACCACACCACACCTCTgTC------------
R:          1   T32010303131123020311101111011110222212112111332322    38        
--
>47_3819_3887_F3	ENSMUST00000113126	-	2593	2614	20	41	50	160	2x9x8x3	
G:       2614    TAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGAATCCCTCA    2593      
                                    ||X||||||||X|||||||X||
T:               -------------------GGtGTGGTGTCaGGGTGCTgGG---------
R:         20   T23032010313131331232031110111232001132000013101122    41        
--
>48_822_1702_F3	ENSMUST00000113126	+	119	144	21	46	50	200	4x12x6x4	
G:        119    CACGTGACCAGTGATGACACAGGAATGTGTGAGATGGTTCTCATTGATCA    144       
                                     ||||X|||||||||||X|||||X|||
T:               --------------------AGGAaTGTGTGAGATGgTTCTCaTTG----
R:         21   T22200201030313012312320213111112223121022223010021    46        
--
>48_3745_3319_F3	ENSMUST00000113126	-	772	793	5	26	50	180	x8x14	
G:        793    TGCATCCAGTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    772       
                     X|||||||X|||||||||||||
T:               ----tCCAGTGGcGGAAAATCCGTGT------------------------
R:          5   T13210201211003020003203111311223002233221222031030    26        
--
>48_4060_4368_F3	ENSMUST00000113126	-	2596	2612	30	46	50	170	17	
G:       2612    AGAAATTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTAAAA    2596      
                                              |||||||||||||||||
T:               -----------------------------TGTGGTGTCAGGGTGCT----
R:         30   T23011232230201030313112112320311101112120011322020    46        
--
>48_4187_1918_F3	ENSMUST00000113126	-	2589	2615	19	45	50	170	1x2x9x8x1x6	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTACCCCTCA    2589      
                                   |X|X||||||||X|||||||XX|||||
T:               ------------------TgGtGTGGTGTCaGGGTGCTggGTACC-----
R:         19   T13310103031313231232031110111202001132210131011020    45        
--
>49_1618_1126_F3	ENSMUST00000113126	+	1	23	28	50	50	170	1x8x10x4	
G:          1    ---------------------------ATGAAGAGAAGAAAATAGCCTTT    23        
                                            |X|||||||X|||||||||X|||
T:               ---------------------------AtGAAGAGAaGAAAATAGCcTTT
R:         28   T23302010303131123123223303311120222212200033231200    50        
--
>49_2301_2485_F3	ENSMUST00000113126	-	2601	2621	19	39	50	170	1x5x15	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                   |X||||X||||||||||||||
T:               ------------------GaGGTGtGGTGTGGTGTCAGG-----------
R:         19   T20110333020103031313201131011110111212022221303322    39        
--
>49_2819_215_F3	ENSMUST00000113126	-	2602	2631	9	38	50	180	2x4x2x3x3x10x6	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                         ||X|||X|X||X||X|||||||||X|||||
T:               --------GGtGTAgAcAGaGGtGTGGTGTGGtGTCAG------------
R:          9   T23312210303113123123203111011110211212203023230211    38        
--
>49_3440_2550_F3	ENSMUST00000113126	+	2343	2360	28	45	50	160	8x10	
G:       2343    CTGGTAATATAGTGTGACAGTGTCTCCAAGTGGTGCTGAGTTCCCAGCCA    2360      
                                            ||||||||X|||||||||
T:               ---------------------------AAGTGGTGcTGAGTTCCC-----
R:         28   T22233203032010300031323331200211011121221020022220    45        
--
>51_909_3208_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x7x2x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||X|X|||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAAT-------------
R:          9   T03233031111222232031110111202300113030130303031132    37        
--
>51_3936_1513_F3	ENSMUST00000113126	-	718	750	5	37	50	216	2x2x5A7x6x10	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                     ||X|X|||| |||||||X|||||X|||||||||
T:               ----CAaTaTGCAAGCAGTAGgCACTGaCATTGTCAT-------------
R:          5   T23120113031310231213223112111130112132000221033022    37        
--
>52_3017_2852_F3	ENSMUST00000113126	-	2070	2099	9	38	50	160	1x3x5x1x2x11x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||||||X|X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAATC------------
R:          9   T00133031111202232031110111232003133032010303212121    38        
--
>52_3118_3995_F3	ENSMUST00000113126	-	2586	2614	20	48	50	216	2x17x1C8	
G:       2614    TAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTTGCA    2586      
                                    ||X||||||||||||||||X ||||||||
T:               -------------------GGtGTGGTGTCAGGGTGCTgCGTACCTTG--
R:         20   T21120103031311231233031110111212001132033131020122    48        
--
>52_3744_3337_F3	ENSMUST00000113126	-	2594	2612	31	49	50	170	13x6	
G:       2612    AAGAAATTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGA    2594      
                                               |||||||||||||X|||||
T:               ------------------------------TGTGGTGTCAGGGtGCTGG-
R:         31   T13220003033020300031313031233031110111212002132102    49        
--
>53_2827_1926_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x10x8	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||X|||||||
T:               -------------------AGGtGTGGTGTGGtGTCAGGG----------
R:         20   T23003031311221232031203111011110311212002332233120    40        
--
>53_3296_1670_F3	ENSMUST00000113126	-	2602	2623	20	41	50	160	1x4x6x11	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |X|||X|||||X||||||||||
T:               -------------------CaGAGgTGTGGtGTGGTGTCAG---------
R:         20   T32333231032020300033322231111031110111212321232223    41        
--
>54_592_1304_F3	ENSMUST00000113126	+	2014	2033	28	47	50	160	2x3x15	
G:       2014    TGGTTGGTATGATGGACCATTCTTTGGGGTAGAGGATTGACTATATTATC    2033      
                                            ||X||X||||||||||||||
T:               ---------------------------GGtAGaGGATTGACTATATT---
R:         28   T13130201030313212313011331010232320230121233330120    47        
--
>54_1788_2019_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111222232031110111232000213003230203302010    36        
--
>54_2045_2220_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000111113030230002213    34        
--
>54_3037_2464_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x8x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||X|||||||
T:               --------CtGAGAGCTccAaCCACAGCtTTTGTAA--------------
R:          9   T00133031111222232031110111233000113011030303302211    36        
--
>54_4211_4725_F3	ENSMUST00000113126	-	2596	2620	24	48	50	170	6x2x12x2x3	
G:       2620    AAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAA    2596      
                                        ||||||X|X|||||||||||X|X||
T:               -----------------------AGGTGTgGtGTGGTGTCAGGgTgCT--
R:         24   T31012233033302010303032120111203111011121203133223    48        
--
>55_403_1314_F3	ENSMUST00000113126	-	2071	2099	14	42	50	170	x4x1x7x9x4x4	
G:       2099    ATGGATTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAG    2071      
                              X|||XX||||||X||||||||X|||X|||
T:               -------------cTGAgaGCTCCAaCCACAGCTtTTGtAAT--------
R:         14   T02130201030313212312322011101112321001230300011223    42        
--
>55_2301_3627_F3	ENSMUST00000113126	+	1418	1453	1	36	50	166	2x4x2x3x1C1x5x1x6x10	
G:       1418    TCTAAGCAGCCATGACTACAAGCACCTGTACTTCGAGTCCGACGCAGCCA    1453      
                 ||X|||X|X||X |X||||XX|||||X|||||||||
T:               TCtAAGcAgCCaCGaCTACaaGCACCtGTACTTCGA--------------
R:          1   T02130201030313312310223110111312023232103021322100    36        
--
>55_3062_2070_F3	ENSMUST00000113126	-	85	116	10	41	50	180	2x2x2x3x2x2x14x5	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    85        
                          ||X|X|X||X|X|X|||||||||||||X||||
T:               ---------GTcAtCaCTgGtCaCGTGTGACTGTCGaATAT---------
R:         10   T23302010331311231230222131111212112330333300020033    41        
--
>56_3190_832_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	x5x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               X||||X||X||||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T23312010320311021123203111011110111210220032223130    37        
--
>56_3875_1107_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	1x5x3x10x6	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X||||X||X|||||||||X|||||
T:               -------------AgACAGaGGtGTGGTGTGGtGTCAG------------
R:         14   T23302010323231021123203111011110211212322332220231    38        
--
>56_3970_1123_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	2x3x3x10x8	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               ||X||X||X|||||||||X|||||||
T:               --------------GAcAGaGGtGTGGTGTGGtGTCAGGG----------
R:         15   T23302010303331123123203111011110211212002213221223    40        
--
>57_501_374_F3	ENSMUST00000113126	-	2604	2624	16	36	50	150	1x3x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                |X||X||X|||||||||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTC--------------
R:         16   T20301010303312312123203111011110111233303333023.20    36        
--
>57_659_4213_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000112010101231302.00    34        
--
>57_1087_2290_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x10x6x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||X|||||X||
T:               ----------------CAGaGGtGTGGTGTGGtGTCAGgGT---------
R:         17   T23302010303133323123203111011110211212201303322.22    41        
--
>57_2448_3685_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000111000230323002.11    34        
--
>57_2561_1948_F3	ENSMUST00000113126	+	997	1020	7	30	50	186	7C4x12	
G:        997    CCCAGAAAATTTCAGGCCCTCAGTACCGCCTGGAGAAGCAGAGTGAGCCT    1020      
                       ||||||| ||||X|||||||||||
T:               ------AAATTTCCGGCCcTCAGTACCGCC--------------------
R:          7   T02301120030020303032212131033011330023222300220.33    30        
--
>58_195_3044_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x14x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||X|||
T:               -------------------AGGtGTGGTGTGGTGTCaGGG----------
R:         20   T233200103033030321132031110111101112320032011231.0    40        
--
>58_1084_1891_F3	ENSMUST00000113126	-	2596	2621	19	44	50	160	1x3x14x3x2x3	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                   |X||X|||||||||||||X||X|X||
T:               ------------------GaGGtGTGGTGTGGTGTCaGGgTgCT------
R:         19   T233020103000033101332031110111101112020312320303.3    44        
--
>58_3130_1386_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x11x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:          9   T001330311112222320311101112320031330000302011032.3    36        
--
>58_3221_4800_F3	ENSMUST00000113126	-	2601	2626	14	39	50	160	1x5x2x1x10x7	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                              |X||||X|XX|||||||||X||||||
T:               -------------AgACAGaGgtGTGGTGTGGtGTCAGG-----------
R:         14   T233020103003310211232331110111102112120133232132.1    39        
--
>58_3331_1200_F3	ENSMUST00000113126	-	2597	2623	14	40	50	176	14C4x1x2x5	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                              |||||||||||||| ||||XX|X||||
T:               -------------CAGAGGTGTGGTGTCGTGTcaGgGTGC----------
R:         14   T220103032312231222011110111231113323011303332122.1    40        
--
>59_442_1703_F3	ENSMUST00000113126	-	642	662	28	48	50	170	2x9x10	
G:        662    TGACAGTGTCTCCAAGTGGTGCTGAGTGTCCTGCACCCTGGCGCTGGCAT    642       
                                            ||X||||||||X|||||||||
T:               ---------------------------GTcCTGCACCCtGGCGCTGGC--
R:         28   T2002010303231023123203101011100213110001033321032.    48        
--
>59_1603_2856_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223203111011123200012100033000323223.    33        
--
>59_1978_3341_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T2330201030033302112320311101111011131331133033333.    35        
--
>59_3672_1318_F3	ENSMUST00000113126	-	2603	2629	11	37	50	176	4x2x2T3x15	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                           ||||X|X| |||X||||||||||||||
T:               ----------TGTAgAcATAGGtGTGGTGTGGTGTCA-------------
R:         11   T2311201010311332313320311101111011121132130332122.    37        
--
>60_320_1940_F3	ENSMUST00000113126	-	2067	2099	9	41	50	190	1x8x1x2x14x2x1x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                         |X|||||||XX|X|||||||||||||X|XX|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTaAtcTGC---------
R:          9   T00133031111222232031110111232000111000213211112013    41        
--
>60_1234_3897_F3	ENSMUST00000113126	-	2603	2629	12	38	50	170	2x2x2x3x11x7	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                            ||X|X|X||X||||||||||X||||||
T:               -----------TGtAgAcAGaGGTGTGGTGTgGTGTCA------------
R:         12   T02230201030313312312320111101112011121321121210222    38        
--
>60_1454_3713_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T00133031111222232031110111232000103030120311332122    37        
--
>60_2819_361_F3	ENSMUST00000113126	-	2587	2618	16	47	50	180	2x1x3x7x2x8x6x3	
G:       2618    TAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGGTACCTTTCA    2587      
                                ||XX||X||||||X|X|||||||X|||||X||
T:               ---------------GTgtGGtGTGGTGtCaGGGTGCTgGGTACcTT---
R:         16   T13220103031310231231031110113202001132200131220203    47        
--
>62_655_3370_F3	ENSMUST00000113126	-	2602	2632	8	38	50	170	1x2x4x2x3x3x11x5	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                        |X|X|||X|X||X||X||||||||||X||||
T:               -------TgGtGTAgAcAGaGGtGTGGTGTGGTgTCAG------------
R:          8   T23303010003113023123203111011110131212230320131220    38        
--
>62_867_1913_F3	ENSMUST00000113126	-	770	787	11	28	50	180	18	
G:        787    TGCATGCGTGGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    770       
                           ||||||||||||||||||
T:               ----------GGCGGAAAATCCGTGTCG----------------------
R:         11   T30110330020033020003203111231333112233111223130002    28        
--
>62_1270_1124_F3	ENSMUST00000113126	-	2074	2100	8	34	50	170	2x3x5x1x2x14	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                        ||X||X||||XX|X|||||||||||||
T:               -------TCtGAgAGCTccAaCCACAGCTTTTGT----------------
R:          8   T00133331211202232031110111232000112301130223210112    34        
--
>62_2426_2619_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111202232031110111232003113013320222221223    36        
--
>63_514_2278_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000132000333222331321    33        
--
>63_1835_838_F3	ENSMUST00000113126	-	2604	2631	9	36	50	160	3x1x2x1x4x3x14	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                         |||XX|XX|||X||X|||||||||||||
T:               --------GGTgtAgaCAGaGGtGTGGTGTGGTGTC--------------
R:          9   T23301010301033311123203111011110111230320031333122    36        
--
>63_3951_3358_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x7x2x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||X|X|||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAAT-------------
R:          9   T00133031111222232031110111222300113031130011332201    37        
--
>64_1633_3207_F3	ENSMUST00000113126	-	2596	2622	18	44	50	170	2x3x12x4x3x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                  ||X||X|||||||||||X|||X||X||
T:               -----------------AGaGGtGTGGTGTGGTGtCAGgGTgCT------
R:         18   T2330201032030003122320311101111011221220133222223.    44        
--
>64_4203_2405_F3	ENSMUST00000113126	-	2590	2614	20	44	50	196	2x17C5	
G:       2614    TAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCCCTCA    2590      
                                    ||X|||||||||||||||| |||||
T:               -------------------GGtGTGGTGTCAGGGTGCTCGGTAC------
R:         20   T2332010303131023123203111011121200113223013132100.    44        
--
>65_1650_942_F3	ENSMUST00000113126	-	2595	2625	15	45	50	170	2x3x3x10x2x4x3x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               ||X||X||X|||||||||X|X|||X||X|||
T:               --------------GAcAGaGGtGTGGTGTGGtGtCAGgGTgCTG-----
R:         15   T23122010303113323123203111011110210212201332132023    45        
--
>65_3651_4314_F3	ENSMUST00000113126	-	1687	1708	29	50	50	166	5A8x8	
G:       1708    CCCTGTTACGAATCAGAAAGCCAGCACTCTGCGGGTCTCGGCACTACAGG    1687      
                                             ||||| ||||||||X|||||||
T:               ----------------------------CTGCGAGTCTCGGCaCTACAGG
R:         29   T11203313002010302331123122011213322122230331231120    50        
--
>65_4280_3759_F3	ENSMUST00000113126	+	2063	2082	12	31	50	180	15x5	
G:       2063    TCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAA    2082      
                            |||||||||||||||X||||
T:               -----------ACAGGCAGATTACAAaAGCT-------------------
R:         12   T33202010303211203122303110202320230330033022123030    31        
--
>67_1455_2928_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23302010301301300123203111011110111210310310020302    37        
--
>68_189_959_F3	ENSMUST00000113126	-	2070	2099	9	38	50	200	1x3x5x1x2x18	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X|||||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAATC------------
R:          9   T00133031111202232031110111232000113032310303330211    38        
--
>68_847_2031_F3	ENSMUST00000113126	-	2600	2622	21	43	50	190	10x9x4	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                     ||||||||||X||||||||X|||
T:               --------------------AGAGGTGTGGtGTGGTGTCaGGG-------
R:         21   T10332231033020103030322201111031110111232003102212    43        
--
>68_2824_3456_F3	ENSMUST00000113126	-	2604	2622	21	39	50	170	10x9	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAA    2604      
                                     ||||||||||X||||||||
T:               --------------------AGAGGTGTGGtGTGGTGTC-----------
R:         21   T33020311233020103033022201111031110111232203322212    39        
--
>69_1229_3170_F3	ENSMUST00000113126	-	2598	2628	12	42	50	176	x4x2T14x5x1x4	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                            X|||X| ||||||||||||||X||||XX|||
T:               -----------gTAGaCTGAGGTGTGGTGTGGtGTCAggGTG--------
R:         12   T31310102031313231212201111011110211213201103333223    42        
--
>69_1891_4084_F3	ENSMUST00000113126	-	2599	2631	9	41	50	182	1x4C1T4x2x15x4	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                         |X||| | ||||X|X||||||||||||||X|||
T:               --------GgTGTCGTCAGAgGtGTGGTGTGGTGTCAgGGT---------
R:          9   T13232030311112312122303111011110111210001233230330    41        
--
>70_478_2494_F3	ENSMUST00000113126	-	2061	2099	9	47	50	196	1x3x5x1x2x7x3A11x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X||X||||XX|X||||||X|| |||||||||||X|X||
T:               --------CtGAgAGCTccAaCCACAGcTTATGTAATCTGCCtGtTC---
R:          9   T00133031111202232031110111222033113032213031002...    47        
--
>70_1422_1536_F3	ENSMUST00000113126	-	2710	2725	24	39	50	160	16	
G:       2725    GCTGGGACTTTGGTATTAGAAGATGTCCTAAACACAGGTAAAGATTAGAA    2710      
                                        ||||||||||||||||
T:               -----------------------TGTCCTAAACACAGGT-----------
R:         24   T22103031311232212213033111202300111120131333201...    39        
--
>70_3319_4958_F3	ENSMUST00000113126	-	2599	2615	21	37	50	170	17	
G:       2615    TCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTAAAAAAAATCCCT    2599      
                                     |||||||||||||||||
T:               --------------------TGGTGTGGTGTCAGGGT-------------
R:         21   T00120201030313312312210111101112120012301321132...    37        
--
>71_204_457_F3	ENSMUST00000113126	-	2596	2618	25	47	50	170	2x4x13x4	
G:       2618    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                         ||X|||X||||||||||||X|||
T:               ------------------------GTgTGGtGTGGTGTCAGGGtGCT---
R:         25   T023000122330201030330112312110311101112120031322.1    47        
--
>71_2338_426_F3	ENSMUST00000113126	-	2591	2615	16	40	50	170	1x2x12x5x5	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                |X|X|||||||||||X||||X||||
T:               ---------------TgGtGTGGTGTCAGGgTGCTgGGTA----------
R:         16   T001330311112322320311101112120111320001303232312.2    40        
--
>71_3204_2754_F3	ENSMUST00000113126	+	2605	2629	23	47	50	170	7x10x1x1x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                       |||||||X|||||||||XXX|||||
T:               ----------------------ACACCACaCCACACCTCtgtCTACA---
R:         23   T213233020103030313132031110112101111022102223110.3    47        
--
>72_831_3383_F3	ENSMUST00000113126	+	1931	1958	17	44	50	160	1x4x1x4x7x2x9	
G:       1931    TTAAAGCAAACAAAGAACAAAAGTGTACATTTCTCTTTCTTTCCTTTTAA    1958      
                                 |X|||XX|||X||||||X|X||||||||
T:               ----------------AcAAAagTGTaCATTTCtCtTTCTTTCC------
R:         17   T22010303131123302210033111111300212300220020333223    44        
--
>72_1296_1541_F3	ENSMUST00000113126	+	2601	2627	19	45	50	156	3T13x2x2x2x4	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                   ||| |||||||||||||X|X|X|X|||
T:               ------------------CCTTACACCACACCACAcCtCtGtCTA-----
R:         19   T23302010301031330120203111011110111203201322330321    45        
--
>72_2511_3115_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x12x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X|||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAT-------------
R:          9   T00133031111232232031110111232000313030031323222100    37        
--
>72_3503_1108_F3	ENSMUST00000113126	-	2594	2615	24	45	50	160	1x2x9x10	
G:       2615    AATTCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                                        |X|X||||||||X|||||||||
T:               -----------------------TgGtGTGGTGTCaGGGTGCTGG-----
R:         24   T13011330201030310112313320311101112020011321020323    45        
--
>73_141_697_F3	ENSMUST00000113126	+	1833	1853	26	46	50	170	9x7x5	
G:       1833    ACCTCCTGGAGGGGCTGAGTGCTGCTCAGCCGTGTGTCCTGCCTGGCAGT    1853      
                                          |||||||||X||||||X||||
T:               -------------------------TCAGCCGTGtGTCCTGcCTGG----
R:         26   T10303131123123203311011123212303113112021002102002    46        
--
>73_600_1678_F3	ENSMUST00000113126	-	2602	2625	15	38	50	186	4T3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||| |||X|||||||||||||||
T:               --------------GACATAGGtGTGGTGTGGTGTCAG------------
R:         15   T23302032303300321133203111011110111212213113320220    38        
--
>73_730_3439_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	x5x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               X||||X||X||||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T23302010303300021123203111011110111213230333020322    37        
--
>73_1839_462_F3	ENSMUST00000113126	-	2595	2625	14	44	50	170	2x3x3x8x2x6x3x4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                              ||X||X||X|||||||X|X|||||X||X|||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGgGTgCTG------
R:         14   T12120103031313231232031110111202112122013321310102    44        
--
>73_2079_2148_F3	ENSMUST00000113126	-	2601	2620	20	39	50	180	3x17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||X||||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAGG-----------
R:         20   T01302010300110303203203111011110111212030102330222    39        
--
>73_2492_2171_F3	ENSMUST00000113126	-	2071	2095	13	37	50	190	5x1x2x17	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                             |||||XX|X||||||||||||||||
T:               ------------GAGCTccAaCCACAGCTTTTGTAAT-------------
R:         13   T00113031111232232031110111232000113031130000303103    37        
--
>73_2641_2720_F3	ENSMUST00000113126	-	2586	2614	17	45	50	210	2x14x3x5x5	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTTGCAAAG    2586      
                                 ||X|||||||||||||X||X||||X||||
T:               ----------------GGtGTGGTGTCAGGGTgCTgGGTAcCTTG-----
R:         17   T32013031211203232031110111212001232300130020112010    45        
--
>73_3408_4781_F3	ENSMUST00000113126	-	2596	2623	17	44	50	180	3x3x8x2x8x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 |||X||X|||||||X|X|||||||X|||
T:               ----------------CAGaGGtGTGGTGTgGtGTCAGGGtGCT------
R:         17   T23302010303131123123203111011120211212000132210200    44        
--
>73_3630_688_F3	ENSMUST00000113126	-	2595	2624	19	48	50	180	2x4x2x4x9x2x7	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAA    2595      
                                   ||X|||X|X|||X||||||||X|X||||||
T:               ------------------ACaGAGgTgTGGtGTGGTGTCaGgGTGCTG--
R:         19   T33133213033020300031022231211031110111222201132132    48        
--
>73_4044_2191_F3	ENSMUST00000113126	-	82	116	10	44	50	190	2x4x3x2x2x12x3x3x4	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    82        
                          ||X|||X||X|X|X|||||||||||X||X||X|||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTcGAaTAtGAG------
R:         10   T23302010331313231230222131111212113323332122220332    44        
--
>74_827_3242_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111232232031110111232000103010310222232203    36        
--
>74_1630_3547_F3	ENSMUST00000113126	-	2602	2627	13	38	50	180	2x5x3x13x3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                             ||X||||X||X||||||||||||X||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTcAG------------
R:         13   T23302010301033321123203111011110111312230322230233    38        
--
>74_3898_1686_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111222232031110111232000103010120232312013    36        
--
>75_284_2104_F3	ENSMUST00000113126	-	764	795	14	45	50	166	4x2x5A1x3x11x2x3	
G:        795    CCCAGCGTAAGTGAATCCAGTGGCGGAAAATCCGTGTCGACCTCCCGTGC    764       
                              ||||X|X|||| |X||X||||||||||X|X||
T:               -------------AATCcAgTGGCAGaAAaTCCGTGTCGAcCtCC-----
R:         14   T20033201030313032310110312100232031112322012011203    45        
--
>76_3805_3715_F3	ENSMUST00000113126	-	2595	2612	31	48	50	160	13x5	
G:       2612    AAGAAATTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGAA    2595      
                                               |||||||||||||X||||
T:               ------------------------------TGTGGTGTCAGGGtGCTG--
R:         31   T10011300030020100031012321231031110111212000132123    48        
--
>77_603_5033_F3	ENSMUST00000113126	-	2072	2098	15	41	50	170	3x1x4x3x7x9	
G:       2098    ATGGATTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAG    2072      
                               |||XX|||X||X||||||X||||||||
T:               --------------TGAgaGCTcCAaCCACAGcTTTTGTAA---------
R:         15   T02330201030313312312320011101112220001130203221202    41        
--
>77_1221_2571_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111222232031110111232003113001233332201221    36        
--
>77_3608_4521_F3	ENSMUST00000113126	-	2060	2099	9	48	50	192	1x3x5x1x2x7x9A3x1T6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X||||||X|||||||| |||X ||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAAACTGcTTGTTCA--
R:          9   T00133031111232232031110111222000113001210201102123    48        
--
>78_358_1881_F3	ENSMUST00000113126	-	2596	2620	20	44	50	190	3x16x1x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||X|||||||||||||||XX||||
T:               -------------------AGGtGTGGTGTGGTGTCAGggTGCT------
R:         20   T23302010300303020311203111011110111212231132220221    44        
--
>78_1016_3650_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x10x7	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||X||||||
T:               ----------------CAGaGGtGTGGTGTGGtGTCAGG-----------
R:         17   T23302010303133323123203111011110211212021330030011    39        
--
>78_1114_3206_F3	ENSMUST00000113126	+	2599	2631	12	44	50	202	3x1x4x2T17T4	
G:       2599    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2631      
                            |||XX|||X| ||||||||||||||||| ||||
T:               -----------ACCctGACaCTACACCACACCTCTGTCTTCACC------
R:         12   T21120103031310231213123111011110222112202110033303    44        
--
>78_2762_3604_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||X||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111232232031110111202000113001110233300100    36        
--
>78_2785_745_F3	ENSMUST00000113126	-	78	116	10	48	50	176	2x2x2x3x2x2x15C3x2x2x3	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGTG    78        
                          ||X|X|X||X|X|X|||||||||||||| |||X|X|X||
T:               ---------GTcAtCaCTgGtCaCGTGTGACTGTCGACTATgAgCtAG--
R:         10   T23302010331311231230222131111212112321233021313233    48        
--
>78_4008_381_F3	ENSMUST00000113126	+	2607	2630	20	43	50	180	1x2x18x3	
G:       2607    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2630      
                                    |X|X|||||||||||||||||X||
T:               -------------------AcCaCACCACACCTCTGTCTAcAC-------
R:         20   T11202010302020320123203111011110222112230112221222    43        
--
>79_2380_4173_F3	ENSMUST00000113126	-	2599	2627	14	42	50	170	2x2x3x3x8x8x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                              ||X|X||X||X|||||||X|||||||X||
T:               -------------TAgAcAGaGGtGTGGTGTgGTGTCAGgGT--------
R:         14   T00230201030313332312320311101112011121230122311222    42        
--
>79_2568_1211_F3	ENSMUST00000113126	-	2598	2622	21	45	50	190	1x5x4x15	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGAAAAA    2598      
                                     |X||||X|||X||||||||||||||
T:               --------------------AgAGGTgTGGtGTGGTGTCAGGGTG-----
R:         21   T20030103031020000330012201211031110111212001120110    45        
--
>80_586_3310_F3	ENSMUST00000113126	-	2601	2624	16	39	50	180	4x3x10x7	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                ||||X||X|||||||||X||||||
T:               ---------------ACAGaGGtGTGGTGTGGtGTCAGG-----------
R:         16   T2330001030310111112320311101111021121202232312002.    39        
--
>80_1005_2734_F3	ENSMUST00000113126	-	2596	2628	12	44	50	196	1x2x5x3x16x1C4	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                            |X|X||||X||X|||||||||||||||X ||||
T:               -----------GtAgACAGaGGtGTGGTGTGGTGTCAGgCTGCT------
R:         12   T2330201030033332112120311101111011121233213220222.    44        
--
>80_1318_1533_F3	ENSMUST00000113126	-	2599	2624	16	41	50	200	4x3x14x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                ||||X||X|||||||||||||X||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCaGGGT---------
R:         16   T2330301030203100112320311101111011123200120200212.    41        
--
>80_1433_1871_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x12x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X|||||||||||X|||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAATC------------
R:          9   T0013303111123223203111011123200001303232030111022.    38        
--
>80_2500_3697_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T2330201032233102112320311101111011120331111232120.    36        
--
>80_3409_4496_F3	ENSMUST00000113126	-	2595	2621	17	43	50	170	1x2x3x3x13x5	
G:       2621    ATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATCC    2595      
                                 |X|X||X||X||||||||||||X||||
T:               ----------------GaGgTGtGGtGTGGTGTCAGGGtGCTG-------
R:         17   T1202330201030313132311210211101112120021321222100.    43        
--
>80_3598_3499_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T0013303111122223203111011123200021301101023333222.    36        
--
>80_3928_2206_F3	ENSMUST00000113126	-	2061	2099	9	47	50	210	1x8x1x2x7x9x1x3x3x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X|||||||XX|X||||||X||||||||XX||X||X|||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAAtcTGcCTgTTC---
R:          9   T0013303111122223203111011120200011301321002010203.    47        
--
>81_378_3648_F3	ENSMUST00000113126	-	2596	2615	23	42	50	160	x16x4	
G:       2615    ATTCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTAAAAATCC    2596      
                                       X|||||||||||||||X|||
T:               ----------------------tGGTGTGGTGTCAGGGtGCT--------
R:         23   T12123302010303031013123101111011121200313222330101    42        
--
>81_1213_2656_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|X|||||||||||||
T:               --------CtGAgAGCTccAaCcACAGCTTTTGTAA--------------
R:          9   T00133031111202232031113111232000113010022011110033    36        
--
>81_1360_2573_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000120311200020300131    33        
--
>81_2753_3291_F3	ENSMUST00000113126	-	77	124	2	49	50	192	5x1x1C2x2x2x3x2x2x13x2x1x1T9	
G:        124    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGAG    77        
                  |||||XX ||X|X|X||X|X|X||||||||||||X|XX |||||||||
T:               -ATTCCtgCGTcAtCaCTgGtCaCGTGTGACTGTCgAatTTGAGCTAGA-
R:          2   T03302010331311231230222131111212112122000122323221    49        
--
>82_318_2337_F3	ENSMUST00000113126	-	706	753	2	49	50	212	1x2x4x6x11x2x2T6x1C1x1x3x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCGGCTT    706       
                  |X|X|||X|||||X||||||||||X|X| ||||||X |XX||X|||||
T:               -CaGcAATaTGCAGgCAGTAGGCACtGaCTTTGTCAtCGagCTtCGGCT-
R:          2   T1302010303131223121320311111120011210231032323032.    49        
--
>82_1325_2968_F3	ENSMUST00000113126	-	2591	2625	15	49	50	196	5x3x12x2x3x2x1A6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                               |||||X||X|||||||||||X|X||X|X ||||||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGGgTgATGGGTA-
R:         15   T2332201030033102112320311101111011220203132310013.    49        
--
>82_1792_3428_F3	ENSMUST00000113126	-	2596	2624	16	44	50	170	3x1x3x15x1x3x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                |||XX||X||||||||||||||XX||X||
T:               ---------------ACAgaGGtGTGGTGTGGTGTCAggGTgCT------
R:         16   T2320201030001331111320311101111011121030133223000.    44        
--
>82_1957_1341_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	5x3x10x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||X|X|||
T:               --------------GACAGaGGtGTGGTGTGGtGtCAG------------
R:         15   T2330201030203132112320311101111021221233030310210.    38        
--
>82_4172_1800_F3	ENSMUST00000113126	-	2592	2613	28	49	50	180	12x6x4	
G:       2613    GAAATTCTAAACAATCAGCCCAGGAGTGTGTGGTGTCAGGGTGCTGGGTA    2592      
                                            ||||||||||||X|||||X|||
T:               ---------------------------GTGTGGTGTCAGgGTGCTgGGT-
R:         28   T1203303300201030033122112331111101112123011323001.    49        
--
>82_4242_1578_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223203111011123200013101213030330210.    33        
--
>83_558_677_F3	ENSMUST00000113126	-	2067	2099	9	41	50	176	1x3x5x1x2x10x6A4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                         |X||X||||XX|X|||||||||X||||| ||||
T:               --------CtGAgAGCTccAaCCACAGCTTtTGTAAACTGC---------
R:          9   T00133031111232232031110111232030113001213201000200    41        
--
>83_1123_472_F3	ENSMUST00000113126	-	2598	2614	22	38	50	170	17	
G:       2614    TCTAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGAAAAAAATCCCT    2598      
                                      |||||||||||||||||
T:               ---------------------GGTGTGGTGTCAGGGTG------------
R:         22   T13030201030313112312120111101112120011113231303012    38        
--
>83_1507_1016_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	13x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||||X||||
T:               ----------------------ACACCACACCACAcCTCT----------
R:         23   T23331010300303332323203111011110111002220331312100    40        
--
>83_1759_3676_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T20332201030310332333203111011110111102220301001132    40        
--
>83_2577_2308_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111222232031110111232300113002310031312121    36        
--
>83_2705_1159_F3	ENSMUST00000113126	-	2592	2614	20	42	50	170	x11x8x4	
G:       2614    TAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2592      
                                    X||||||||||X|||||||X|||
T:               -------------------gGTGTGGTGTCaGGGTGCTgGGT--------
R:         20   T13030103031313231232011110111232001132200102323102    42        
--
>83_2775_3882_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000121000020122202132    33        
--
>83_3583_185_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x9x7	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X||||||||X||||||
T:               ------------GAGCTccAaCCACAGCTtTTGTAA--------------
R:         13   T00133131111202232031110111232300113011221201211213    36        
--
>84_437_3557_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T00133031111202232031110111232000103031030223110110    37        
--
>84_669_2352_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T02330201030313112312320111101112011121130331002221    38        
--
>84_1295_3875_F3	ENSMUST00000113126	-	2601	2626	14	39	50	166	x6C1x9x9	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                              X||||| |X||||||||X||||||||
T:               -------------aGACAGCGgTGTGGTGTgGTGTCAGG-----------
R:         14   T23302010303201221123331111011120111212023322320002    39        
--
>84_1564_4189_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	5x3x12x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||X|X||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGG-----------
R:         15   T23302010300003021123203111011110112202030232223211    39        
--
>84_1645_3066_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23102010300201321123203111011110111200300103101131    36        
--
>85_1108_3399_F3	ENSMUST00000113126	-	2599	2626	14	41	50	200	1x5x3x12x7	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                              |X||||X||X|||||||||||X||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGtCAGGGT---------
R:         14   T23302010303031321123203111011110112212001330213232    41        
--
>85_1408_1923_F3	ENSMUST00000113126	+	2605	2630	23	48	50	160	x12x4x3x4x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                       X|||||||||||X|||X||X|||X||
T:               ----------------------aCACCACACCACaCCTcTGtCTAcAC--
R:         23   T33302010300300323323203111011110113102321322331110    48        
--
>85_2667_2679_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113010130303132320    36        
--
>85_2716_2234_F3	ENSMUST00000113126	-	2600	2626	14	40	50	170	2x7x2x9x2x5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              ||X||||||X|X||||||||X|X||||
T:               -------------AGaCAGAGGtGtGGTGTGGTgTcAGGG----------
R:         14   T23301010300031211122203121011110121312000010133302    40        
--
>85_3824_36_F3	ENSMUST00000113126	-	2076	2099	9	32	50	160	1x3x5x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTCACCATGAAGGAGATCTT    2076      
                         |X||X||||X|X||||||||||||
T:               --------CtGAgAGCTcCaACCACAGCTTTT------------------
R:          9   T00133031111232232000010111232000231002100321302110    32        
--
>86_880_1572_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302010313001322123203111011110111212300232230021    38        
--
>86_2824_3619_F3	ENSMUST00000113126	+	2907	2930	13	36	50	160	2x4x1x5x12	
G:       2907    TCTGTATTTGAATTTTTAGCAATTTTATATTTAGATATCTTTGAAATTGT    2930      
                             ||X|||XX||||X|||||||||||
T:               ------------TTtTTAgcAATTtTATATTTAGAT--------------
R:         13   T12120232112010200330103030333300322320311121112220    36        
--
>86_3035_3798_F3	ENSMUST00000113126	-	2592	2614	16	38	50	170	2x13x3x5	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAGA    2592      
                                ||X||||||||||||X||X||||
T:               ---------------GGtGTGGTGTCAGGGtGCtGGGT------------
R:         16   T01030303112312320311101112120001331001103102323200    38        
--
>86_3210_2068_F3	ENSMUST00000113126	-	2605	2626	14	35	50	160	1x5x3x13	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              |X||||X||X||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGT---------------
R:         14   T32331010303031021123202111011110111302331202332132    35        
--
>86_4294_1227_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T23322010300101023323201111011110111202322332213222    36        
--
>87_658_2850_F3	ENSMUST00000113126	-	2596	2623	17	44	50	180	2x1x3x12x4x6	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 ||XX||X|||||||||||X|||X|||||
T:               ----------------CAgaGGtGTGGTGTGGTGtCAGgGTGCT------
R:         17   T23302010301000032103203111011110110212301132201211    44        
--
>87_1360_2422_F3	ENSMUST00000113126	-	2596	2631	9	44	50	166	3T2x1x1x3x3x14x3x2x3	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                         ||| ||XXX||X||X|||||||||||||X||X|X||
T:               --------GGTTTAgacAGaGGtGTGGTGTGGTGTCaGGgTgCT------
R:          9   T23301010301003300123203111011110111202031332001010    44        
--
>87_1611_484_F3	ENSMUST00000113126	-	2591	2626	14	49	50	186	1x5x3x13A2x1x3x3x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                              |X||||X||X|||||||||||| ||XX||X||X|||
T:               -------------AgACAGaGGtGTGGTGTGGTGTAAGggTGcTGgGTA-
R:         14   T23301010303001021123203111011110111302231102120132    49        
--
>88_510_4576_F3	ENSMUST00000113126	-	2060	2099	9	48	50	172	1x3x5x1x2x12x4x1G1x4A4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X|||||||||||X|||X |X||| ||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAtGTgCCTATTCA--
R:          9   T00133031111202232031110111232000013011133023302112    48        
--
>88_932_1593_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	x3x18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    X||X|||||||||||||||||
T:               -------------------aGGtGTGGTGTGGTGTCAGGG----------
R:         20   T11123230000103031313203111011110111212000002233230    40        
--
>88_1726_4598_F3	ENSMUST00000113126	-	2593	2620	20	47	50	200	3x12x4x6x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                    |||X|||||||||||X|||X|||||X||
T:               -------------------AGGtGTGGTGTGGTGtCAGgGTGCTgGG---
R:         20   T23102110320003302323203111011110113212301132200211    47        
--
>88_1937_4256_F3	ENSMUST00000113126	-	2060	2099	9	48	50	172	1x3x5x1x2x9x7x2x2G2A4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X||||||||X||||||X|X| || ||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAAtCtGGCTATTCA--
R:          9   T00133031111232232031110111232300113022110323302120    48        
--
>88_2061_1175_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010301301001123203111011110111202220303010023    36        
--
>88_2244_5027_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x7x10	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||X|||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAAT-------------
R:          9   T00133031111202232031110111222000113031030302332220    37        
--
>89_1066_1251_F3	ENSMUST00000113126	-	2074	2099	9	34	50	160	1x3x5x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X||X||||XX|X|||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111232232031110111232000111001121313332223    34        
--
>89_2166_818_F3	ENSMUST00000113126	-	2590	2612	22	44	50	170	11x2x5x5	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCCCTCA    2590      
                                      |||||||||||X|X||||X||||
T:               ---------------------TGTGGTGTCAGgGtGCTGgGTAC------
R:         22   T31003013031313231232031110111212202132130131133331    44        
--
>89_2518_4562_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111232232031110111232000113011210102330131    36        
--
>89_3497_240_F3	ENSMUST00000113126	-	2071	2099	9	37	50	150	1x3x5x1x2x9x2x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||X|X|||||
T:               --------CtGAgAGCTccAaCCACAGCTtTtGTAAT-------------
R:          9   T00133031111232232031110111232301113030030331330130    37        
--
>89_3595_2195_F3	ENSMUST00000113126	-	2069	2098	15	44	50	160	x3x5x1x2x9x2x8	
G:       2098    ATGGATTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAG    2069      
                               X||X||||XX|X||||||||X|X|||||||
T:               --------------tGAgAGCTccAaCCACAGCTtTtGTAATCT------
R:         15   T02330201030313112322320311101112322021130322301002    44        
--
>89_3762_4135_F3	ENSMUST00000113126	-	2590	2618	17	45	50	170	3x1x2x9x8x3x3	
G:       2618    CTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGGTACCCCTC    2590      
                                 |||XX|X||||||||X|||||||X||X||
T:               ----------------GTGtgGtGTGGTGTCaGGGTGCTgGGtAC-----
R:         17   T01331010333133323113203111011120200113200033131133    45        
--
>90_2277_2661_F3	ENSMUST00000113126	-	2071	2094	19	42	50	180	4x3x11x6	
G:       2094    ATGGATTCTCCCTTATCCAGCTCCAACCACAGCTTTTGTAATTGAAGGAG    2071      
                                   ||||X||X||||||||||X|||||
T:               ------------------AGCTcCAaCCACAGCTTTtGTAAT--------
R:         19   T1003020103031311231232001110111232002113033322112.    42        
--
>90_2540_3433_F3	ENSMUST00000113126	-	2066	2099	9	42	50	200	1x3x5x1x11x8x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCGAGATCTT    2066      
                         |X||X||||XX||||||||||X|||||||X|X||
T:               --------CtGAgAGCTccAACCACAGCTtTTGTAATcTgCC--------
R:          9   T0013303111123223203101011123220011303122303131232.    42        
--
>90_3002_376_F3	ENSMUST00000113126	+	2589	2629	7	47	50	182	3x4G1x2x2x2T13x5x1x3x3	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                       |||X||| |X|X|X| |||||||||||||X||||XX||X||
T:               ------GGTaCCCGGcAcCcTTACACCACACCACAcCTCTgtCTaCA---
R:          7   T2320301012100300130320311101111011120222022211121.    47        
--
>90_3166_2046_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x11x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||X|||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAAT-------------
R:          9   T0013303111120223203111011123200311303103032130102.    37        
--
>91_371_840_F3	ENSMUST00000113126	-	2069	2099	9	39	50	190	1x3x5x1x2x16x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X|||||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAAtCT-----------
R:          9   T00133031111232232031110111232000113012220010203031    39        
--
>91_2494_4659_F3	ENSMUST00000113126	-	2593	2623	18	48	50	170	3x3x8x2x7x2x3x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                  |||X||X|||||||X|X||||||X|X||X||
T:               -----------------CAGaGGtGTGGTGTgGtGTCAGGgTgCTgGG--
R:         18   T12230201030313112312320311101112021121203123220033    48        
--
>91_2501_4154_F3	ENSMUST00000113126	-	2591	2624	7	40	50	172	3C3A1x1x2x17x2x3	
G:       2624    ACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                       ||| ||| |XX|X||||||||||||||||X|X||
T:               ------ACACAGGAGtgGtGTGGTGTCAGGGTGCTgGgTA----------
R:          7   T00133131111202232031110111212001132202130201112133    40        
--
>91_2545_1876_F3	ENSMUST00000113126	-	2591	2612	19	40	50	160	9x8x2x3	
G:       2612    ACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                   |||||||||X|||||||X|X||
T:               ------------------TGTGGTGTCaGGGTGCTgGgTA----------
R:         19   T22133031211203232031110111232001132001130322332231    40        
--
>91_3508_4468_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111232232031110111232000113002030232312112    36        
--
>92_329_1823_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000131131020000312230    33        
--
>92_1165_1920_F3	ENSMUST00000113126	-	2600	2629	11	40	50	192	2x1T5C2x18	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                           ||X ||||| ||X|||||||||||||||||
T:               ----------TGtTGACAGCGGtGTGGTGTGGTGTCAGGG----------
R:         11   T20102010303100121123303111011110111212000313302211    40        
--
>92_1211_498_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23302010300302321123203111011110111202220323221222    36        
--
>92_1551_1337_F3	ENSMUST00000113126	-	2606	2624	16	34	50	170	7x12	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                                |||||||X|||||||||||
T:               ---------------ACAGAGGtGTGGTGTGGTG----------------
R:         16   T23303010321301011122203111011110112103312333211110    34        
--
>92_1557_10_F3	ENSMUST00000113126	-	2606	2625	15	34	50	180	5x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||||||||||||||
T:               --------------GACAGaGGTGTGGTGTGGTG----------------
R:         15   T23302010323131121123201111011110113202313322232030    34        
--
>92_1583_3390_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000102110330203312222    33        
--
>92_1979_4568_F3	ENSMUST00000113126	-	77	117	10	50	50	196	1x2x2x2x3x12x7T1x2x5x3	
G:        117    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGA    77        
                          |X|X|X|X||X|||||||||||X|||||| |X|X||||X||
T:               ---------TgTcAtCaCTgGTCACGTGTGAcTGTCGATTaTgAGCTaGA
R:         10   T23302010323131123123012113111122211232302332232222    50        
--
>92_3111_2457_F3	ENSMUST00000113126	+	2605	2632	23	50	50	200	12x4x6x1x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                       ||||||||||||X|||X|||||XX||||
T:               ----------------------ACACCACACCACaCCTcTGTCTacACCA
R:         23   T23102010301303300213203111011110113102321122001101    50        
--
>92_3184_2722_F3	ENSMUST00000113126	-	2601	2627	13	39	50	190	2x5x3x14x3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                             ||X||||X||X|||||||||||||X||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTCaGG-----------
R:         13   T23302010301303021123203111011110111202033332222330    39        
--
>92_4278_850_F3	ENSMUST00000113126	-	2599	2623	18	42	50	170	3x11x2x4x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |||X||||||||||X|X|||X||||
T:               -----------------CAGaGGTGTGGTGTgGtGTCaGGGT--------
R:         18   T31330201030313112312320111101112031122200103303103    42        
--
>93_1175_4632_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T001330311112022320311101112322001130001232230300.3    36        
--
>93_1324_3007_F3	ENSMUST00000113126	+	2584	2621	2	39	50	172	1x4x2x1x5x1x3G2T13x4	
G:       2584    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                  |X|||X|XX||||XX|| || |||||||||||||X|||
T:               -GgCAAgGtaCCCAgcACGCTTACACCACACCACAcCTC-----------
R:          2   T233310103010013011332031110111101113022001231321.2    39        
--
>93_2064_4897_F3	ENSMUST00000113126	+	2591	2622	9	40	50	172	3x1A4x4T2x11x5	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                         |||X ||||X||| ||X||||||||||X||||
T:               --------TACcAAGCAcCCTTACaCCACACCACAcCTCT----------
R:          9   T231310130313102312002031010111101112022203320012.3    40        
--
>93_2477_1588_F3	ENSMUST00000113126	-	85	116	11	42	50	180	3x3x5x11x2x3x1x4	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATT    85        
                           |||X||X||||X||||||||||X|X||XX|||
T:               ----------GTCaTCaCTGGtCACGTGTGACtGtCGaaTAT--------
R:         11   T103002103031233231210221131111211132332333220021.1    42        
--
>93_2497_1110_F3	ENSMUST00000113126	+	2597	2622	15	40	50	166	4x1x2T11x7	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                               ||||XX| |||||||||||X||||||
T:               --------------GCACccTTACACCACACCAcACCTCT----------
R:         15   T203020103003003311132031110111101311022203232331.3    40        
--
>93_3818_1544_F3	ENSMUST00000113126	-	2069	2099	9	39	50	190	1x8x1x2x9x7x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X||||||||X||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAAtCT-----------
R:          9   T001330311112222320311101112323001130022003323320.2    39        
--
>94_1142_1918_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x1x2x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||XX|X|||||||||||||||
T:               --------------GACAGagGtGTGGTGTGGTGTCAG------------
R:         15   T23102010121003321123103111011110111212230322103312    38        
--
>94_1817_2590_F3	ENSMUST00000113126	-	2068	2098	15	45	50	170	3x1x4x1x5x6x2x9	
G:       2098    ATGGATTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAG    2068      
                               |||XX|||XX||||X|||||X|X||||||||
T:               --------------TGAgaGCTccAACCaCAGCTtTtGTAATCTG-----
R:         15   T02330201030313312312320310100112322021130322102223    45        
--
>94_2242_546_F3	ENSMUST00000113126	-	2599	2625	14	40	50	170	2x3x3x8x2x9	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                              ||X||X||X|||||||X|X||||||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGGT----------
R:         14   T13020103031313231232031110111202112120012132323221    40        
--
>94_2663_3682_F3	ENSMUST00000113126	-	2602	2623	17	38	50	200	6x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 ||||||X|||||||||||||||
T:               ----------------CAGAGGtGTGGTGTGGTGTCAG------------
R:         17   T23302010301300310122203111011110111212222023221322    38        
--
>94_3043_3015_F3	ENSMUST00000113126	-	719	753	2	36	50	170	1x2x4x6x10x1x1x3x1x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X|||||X|||||||||XXX||XX|||||
T:               -CaGcAATaTGCAGgCAGTAGGCActgACatTGTCA--------------
R:          2   T20020103031312231213203133221220112100033103312223    36        
--
>94_3639_2566_F3	ENSMUST00000113126	-	722	754	1	33	50	210	4x4x5x1x11x2x6	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    722       
                 ||||X|||X||||XX||||||||||X|X|||||
T:               TCAGcAATaTGCAggCAGTAGGCACtGaCATTG-----------------
R:          1   T02120103031311231213203113111130103102123230020031    33        
--
>94_4294_2652_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000122102130323122222    33        
--
>95_2192_1324_F3	ENSMUST00000113126	+	2592	2620	10	38	50	176	1x4x4x1x2T16	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                          |X|||X|||XX| ||||||||||||||||
T:               ---------AcCCAgCACccTTACACCACACCACACCT------------
R:         10   T23301010323001031123203111011110111102331200132220    38        
--
>95_2283_2180_F3	ENSMUST00000113126	-	79	105	21	47	50	170	2x12x2x3x4x4	
G:        105    CTCTGTATTTGAATTTTTAGTCACGTGTGACTGTCGAATATGAGCTATTG    79        
                                     ||X|||||||||||X|X||X|||X|||
T:               --------------------TCaCGTGTGACTGTcGaATaTGAgCTA---
R:         21   T23333013031313202230223131111212113300323120323121    47        
--
>95_2309_2236_F3	ENSMUST00000113126	-	2293	2318	9	34	50	180	4x8x2x9x3	
G:       2318    AGTGAAGGCAGCACCTGTCTCTCAGATCACAGGCTCAGTGCCTACTGCCT    2293      
                         ||||X|||||||X|X||||||||X||
T:               --------CAGCaCCTGTCTcTcAGATCACAgGC----------------
R:          9   T01330310112301021122323122321113031202101120302322    34        
--
>95_2856_4655_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x8x10	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X|||||||X|||||||||
T:               --------CtGAgAGCTccAaCCACAGCtTTTGTAATC------------
R:          9   T00133031111232232031110111230000113032300323332211    38        
--
>95_4035_1195_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000112011120222000121    34        
--
>96_821_924_F3	ENSMUST00000113126	+	2605	2627	23	45	50	190	13x6x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||X|||||X|||
T:               ----------------------ACACCACACCACAcCTCTGtCTA-----
R:         23   T23302010303001323123001111011110111202221322320130    45        
--
>96_1416_2395_F3	ENSMUST00000113126	-	2596	2625	15	44	50	166	3x2x3x12x4C2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               |||X|X||X|||||||||||X||| ||X||
T:               --------------GACaGaGGtGTGGTGTGGTGtCAGCGTgCT------
R:         15   T23300010303131121323203111011110113212331232333101    44        
--
>96_1604_2369_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010321001301123203111011110111202231302232112    36        
--
>96_1703_3070_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23102010300301321123203111011110111202233322332320    36        
--
>96_2417_2221_F3	ENSMUST00000113126	-	2599	2625	15	41	50	170	5x3x12x2x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               |||||X||X|||||||||||X|X|X||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGgGT---------
R:         15   T23302010300303321123203111011110112232201330220120    41        
--
>96_2473_1178_F3	ENSMUST00000113126	-	2596	2620	20	44	50	190	3x14x3x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||X|||||||||||||X||X||||
T:               -------------------AGGtGTGGTGTGGTGTCaGGgTGCT------
R:         20   T23302010303201001123203111011110111202021132323212    44        
--
>96_2677_4864_F3	ENSMUST00000113126	-	730	750	5	25	50	170	3x7x11	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     |||X||||||X||||||||||
T:               ----CAAtATGCAGgCAGTAGGCAC-------------------------
R:          5   T23300100331312231213203111010200033003010011030121    25        
--
>96_2829_2080_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x7x10	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||X|||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAAT-------------
R:          9   T00133031111222232031110111222000113031030103032223    37        
--
>96_3567_3753_F3	ENSMUST00000113126	-	2594	2613	28	47	50	160	1x11x8	
G:       2613    GAAATTCTAAACAATCAGCCCAGGAGTGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                            |X||||||||||X|||||||
T:               ---------------------------GtGTGGTGTCAGgGTGCTGG---
R:         28   T12313303202010300332323123322111011121230113210323    47        
--
>96_3743_4634_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x10x6	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X|||||||||X|||||
T:               ------------GAGCTccAaCCACAGCTTtTGTAA--------------
R:         13   T00133131111202232031110111232030113000132233302200    36        
--
>96_3867_3673_F3	ENSMUST00000113126	+	2597	2622	15	40	50	186	4x1x2T18	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                               ||||XX| ||||||||||||||||||
T:               --------------GCACccTTACACCACACCACACCTCT----------
R:         15   T23302010300300031123203111011110111102220312320033    40        
--
>97_1186_1740_F3	ENSMUST00000113126	-	2596	2620	20	44	50	176	3x13A5x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||X|||||||||||| |||||X||
T:               -------------------AGGtGTGGTGTGGTGTAAGGGTgCT------
R:         20   T23302010302301332113203111011110111302001232033303    44        
--
>97_1570_533_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	13x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||||X||||
T:               ----------------------ACACCACACCACAcCTCT----------
R:         23   T23102010301300332323203111011110111202222330333221    40        
--
>97_3150_687_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T13330201030313312312320111101112011121031321223223    38        
--
>97_3187_3614_F3	ENSMUST00000113126	-	1431	1447	22	38	50	170	17	
G:       1447    CAAAGAAAACTGAACAGGCGATACAGGTGCTTGTAGTCGAAGGAGAAGAA    1431      
                                      |||||||||||||||||
T:               ---------------------TACAGGTGCTTGTAGTC------------
R:         22   T23302110300000302120103112011320113212221222103102    38        
--
>97_3962_297_F3	ENSMUST00000113126	+	2608	2627	21	40	50	160	2x11x7	
G:       2608    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2627      
                                     ||X||||||||||X||||||
T:               --------------------CCaCACCACACCTcTGTCTA----------
R:         21   T23302010301331302113203111011110232112230230020111    40        
--
>97_4103_4213_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000102302111102233300    33        
--
>97_4206_4648_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000132022120113330322    33        
--
>97_4211_3206_F3	ENSMUST00000113126	-	2073	2099	9	35	50	170	1x3x5x1x2x15	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                         |X||X||||XX|X||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTA---------------
R:          9   T00133031111202232031110111232000113111323221303123    35        
--
>98_1001_1530_F3	ENSMUST00000113126	+	2598	2621	16	39	50	166	4x2T12x5	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                ||||X| ||||||||||||X||||
T:               ---------------CACCcTTACACCACACCACaCCTC-----------
R:         16   T23102010320303001103203111011110110102202330113233    39        
--
>98_1479_1120_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T33302010303303031123203111011110111202233223023002    36        
--
>98_1529_835_F3	ENSMUST00000113126	-	2605	2624	16	35	50	160	4x3x13	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                                ||||X||X||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGT---------------
R:         16   T33302010303033301123203111011110111303300002032332    35        
--
>98_1938_3117_F3	ENSMUST00000113126	-	2069	2099	9	39	50	176	1x8x1x2x13A2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X|||||||||||| ||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGAAAtCT-----------
R:          9   T00133031111222232031110111232000120012200013332323    39        
--
>98_2220_3348_F3	ENSMUST00000113126	-	1433	1463	6	36	50	176	2x2x5x3x2T1x15	
G:       1463    CAAAGTGCGTCGGACTCGAAGTACAGGTGCTTGTAGCAGAAGGAGAAGAA    1433      
                      ||X|X||||X||X| |X||||||||||||||
T:               -----TGcGtCGGAcTCgATGtACAGGTGCTTGTAG--------------
R:          6   T10032010302302322123103112011320113202010123232113    36        
--
>98_2386_3065_F3	ENSMUST00000113126	+	2598	2622	16	40	50	170	3x1x3x4x14	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                |||XX||X|||X|||||||||||||
T:               ---------------CACccTGaCACcACACCACACCTCT----------
R:         16   T13102023301303001121213111211110111102223232322232    40        
--
>98_2481_1485_F3	ENSMUST00000113126	-	2607	2626	14	33	50	180	9x11	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTACTGTTTGAAAAAAAAT    2607      
                              |||||||||X||||||||||
T:               -------------AGACAGAGGtGTGGTGTGGT-----------------
R:         14   T23121010303331221122203111011110131102121202120003    33        
--
>98_3084_943_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23302010300000000123203111011110111102223201121311    40        
--
>98_3579_2346_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T00133031111232232031110111232000103030203200033213    37        
--
>98_3937_2725_F3	ENSMUST00000113126	-	2594	2614	30	50	50	170	2x13x6	
G:       2614    AAAGAAATTCTAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGG    2594      
                                              ||X||||||||||||X|||||
T:               -----------------------------GGtGTGGTGTCAGGGtGCTGG
R:         30   T12020232113302010303131123122203111011121200213210    50        
--
>99_1233_2437_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030130101112320311101111011123222222331312.    36        
--
>99_1420_2386_F3	ENSMUST00000113126	-	2060	2099	9	48	50	160	1x3x5x1x2x11x2x3x3x1x3x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X||||||||||X|X||X||XX||X|X||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAAtCTgcCTgTtCA--
R:          9   T0013303111123223203111011123200313301223002311213.    48        
--
>99_1479_3581_F3	ENSMUST00000113126	-	719	753	2	36	50	170	1x2x4x5x1x4x2x5x2x9	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X||||XX|||X|X||||X|X||||||||
T:               -CaGcAATaTGCAggCAGtAgGCACtGaCATTGTCA--------------
R:          2   T1302010303131123120310311311113011212223332330013.    36        
--
>99_1690_2267_F3	ENSMUST00000113126	-	2064	2099	9	44	50	180	1x3x5x1x2x12x4x3x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGGATCTT    2064      
                         |X||X||||XX|X|||||||||||X|||X||X|X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAtCTgCcTG------
R:          9   T0013303111120223203111011123200021300223322121212.    44        
--
>99_1867_2865_F3	ENSMUST00000113126	-	2593	2622	18	47	50	186	2x3x16x2C2x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                  ||X||X|||||||||||||||X| ||X|||
T:               -----------------AGaGGtGTGGTGTGGTGTCAGgGCGCtGGG---
R:         18   T2333201030330332332320311101111011121220333010023.    47        
--
>99_2072_2633_F3	ENSMUST00000113126	-	2596	2626	14	44	50	170	1x2x3x3x12x4x3x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                              |X|X||X||X|||||||||||X|||X||X||
T:               -------------AgAcAGaGGtGTGGTGTGGTGtCAGgGTgCT------
R:         14   T2330221230331032312320311101111011321220133222200.    44        
--
>99_2514_721_F3	ENSMUST00000113126	-	2592	2614	16	38	50	210	18x5	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAGA    2592      
                                ||||||||||||||||||X||||
T:               ---------------GGTGTGGTGTCAGGGTGCtGGGT------------
R:         16   T0103031111232232011110111212001133100113322231131.    38        
--
>99_3014_593_F3	ENSMUST00000113126	-	2602	2619	21	38	50	160	2x16	
G:       2619    AAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                     ||X|||||||||||||||
T:               --------------------GGtGTGGTGTGGTGTCAG------------
R:         21   T2330201030310132332300311101111011121223323212121.    38        
--
>99_3051_4378_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	13x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||||X||||
T:               ----------------------ACACCACACCACAcCTCT----------
R:         23   T2310103031011230200300311101111011130222220330032.    40        
--
>99_3726_4416_F3	ENSMUST00000113126	+	216	245	18	47	50	186	1x3x2T8x10x5	
G:        216    GGTCAGAAGTTCAGGGAAGCAGTGGTGAGACGCAGGGCTACATATACGCC    245       
                                  |X||X| ||||||||X|||||||||X||||
T:               -----------------AgCAgTTGTGAGACGcAGGGCTACAtATAC---
R:         18   T1101030313112332220311101112221301200323110333121.    47        
--
>100_2924_4131_F3	ENSMUST00000113126	+	2592	2621	10	39	50	180	5x2x2x1x15x1x4	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                          |||||X|X|XX||||||||||||||XX|||
T:               ---------ACCCAgCaCccTGACACCACACCACacCTC-----------
R:         10   T33302010301001333123212111011110113202202331302022    39        
--
>100_4211_1241_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x3x5x1x2x12x4x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X|||||||||||X|||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAtCT-----------
R:          9   T00133031111232232031110111232000313002230322200021    39        
--
>101_657_2135_F3	ENSMUST00000113126	-	2602	2621	19	38	50	160	1x3x16	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                   |X||X|||||||||||||||
T:               ------------------GaGGtGTGGTGTGGTGTCAG------------
R:         19   T23102010302003323313203111011110111212302021210...    38        
--
>101_1084_3146_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	3x3x3x13x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |||X||X||X||||||||||||X||
T:               -------------AGAcAGaGGtGTGGTGTGGTGTcAG------------
R:         14   T23102013203310223123203111011110111012220303120...    38        
--
>101_1353_2903_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000110001110323232...    34        
--
>101_1653_742_F3	ENSMUST00000113126	+	2604	2628	22	46	50	190	13x1x6x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                      |||||||||||||XX|||||X||||
T:               ---------------------GACACCACACCACacCTCTGtCTAC----
R:         22   T10102010301220332123202111011110110202221222313...    46        
--
>101_2054_3505_F3	ENSMUST00000113126	-	2602	2617	23	38	50	160	16	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                       ||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAG------------
R:         23   T23302010323101032223203111011110111212231030221...    38        
--
>101_3990_2363_F3	ENSMUST00000113126	-	717	753	2	38	50	176	1x2x4x5x1A3x3x4x2x11	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATTTGAGAGACAGGT    717       
                  |X|X|||X||||X |||X||X|||X|X||||||||||
T:               -CaGcAATaTGCAgACAGtAGgCACtGaCATTGTCATT------------
R:          2   T20020103031313211233223113111130112130332233103...    38        
--
>102_927_4227_F3	ENSMUST00000113126	-	77	112	14	49	50	186	2x3x2x2x13x3x5x2C3	
G:        112    CTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGAG    77        
                              ||X||X|X|X||||||||||||X||X||||X| |||
T:               -------------TCaCTgGtCaCGTGTGACTGTCgAAtATGAgCCAGA-
R:         14   T2330101303131123123022213111121211222023312030122.    49        
--
>102_2361_1562_F3	ENSMUST00000113126	-	2606	2625	15	34	50	180	8x12	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               ||||||||X|||||||||||
T:               --------------GACAGAGGtGTGGTGTGGTG----------------
R:         15   T2330201030003332112220211101111011323020332222212.    34        
--
>102_4280_1194_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	1x3x3x7x11	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                |X||X||X||||||X||||||||||
T:               ---------------AcAGaGGtGTGGTGtGGTGTCAGGG----------
R:         16   T2330101030000130212320311101131011121200020301322.    40        
--
>103_201_1748_F3	ENSMUST00000113126	-	2599	2625	15	41	50	170	3x2x3x12x4x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               |||X|X||X|||||||||||X|||X||
T:               --------------GACaGaGGtGTGGTGTGGTGtCAGgGT---------
R:         15   T23300010300001021323203111011110112212201233013102    41        
--
>103_896_2556_F3	ENSMUST00000113126	-	2073	2099	9	35	50	170	1x3x5x1x2x15	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                         |X||X||||XX|X||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTA---------------
R:          9   T00133031111202232031110111232000113101233302132213    35        
--
>103_1415_2727_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	6x8x8	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 ||||||X|||||||X|||||||
T:               ----------------CAGAGGtGTGGTGTgGTGTCAG------------
R:         17   T23302010300303312122203111011130111212103310231112    38        
--
>103_1509_2198_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111202232031110111232300113003230020332123    36        
--
>103_2328_2408_F3	ENSMUST00000113126	-	2599	2632	8	41	50	186	1x2x6x2C3x14x2x3	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                        |X|X|||||X| |||X|||||||||||||X|X||
T:               -------TgGtGTAGAcACAGGtGTGGTGTGGTGTCaGgGT---------
R:          8   T23022010003113223111203111011110111202201211310102    41        
--
>103_2401_4490_F3	ENSMUST00000113126	-	179	201	11	33	50	170	7x5x2x9	
G:        201    TTCTGATCTGACCCACTGTCTCCAGGCACTGACTCTAATGTCTTCCATTC    179       
                           |||||||X||||X|X||||||||
T:               ----------ACCCACTgTCTCcAgGCACTGAC-----------------
R:         11   T23102010303100112312223130311212121123320011332222    33        
--
>103_2456_590_F3	ENSMUST00000113126	-	2598	2619	25	46	50	160	7x9x2x4	
G:       2619    AAAGAAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGTGAAAA    2598      
                                         |||||||X||||||||X|X|||
T:               ------------------------GGTGTGGtGTGGTGTCaGgGTG----
R:         25   T10033230033302010303131130111103111011123220111303    46        
--
>103_2799_4676_F3	ENSMUST00000113126	-	2595	2623	17	45	50	190	3x3x10x6x3x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                 |||X||X|||||||||X|||||X||X|||
T:               ----------------CAGaGGtGTGGTGTGGtGTCAGgGTgCTG-----
R:         17   T22233011222003010123203111011110011212301032121213    45        
--
>103_2925_2104_F3	ENSMUST00000113126	-	90	112	16	38	50	170	2x3x2x16	
G:        112    TGCTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGTATCTTTGAAAT    90        
                                ||X||X|X|||||||||||||||
T:               ---------------TCaCTgGtCACGTGTGACTGTCG------------
R:         16   T31233211030313112312302211311112121123331223321122    38        
--
>103_3253_3568_F3	ENSMUST00000113126	-	2602	2631	9	38	50	166	x3T2x2x3x3x16	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                         X|| ||X|X||X||X|||||||||||||||
T:               --------gGTTTAgAcAGaGGtGTGGTGTGGTGTCAG------------
R:          9   T22022010301003023123203111011110111212200223322302    38        
--
>104_622_4917_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111232232031110111232000313002330312300331    36        
--
>104_1027_5016_F3	ENSMUST00000113126	-	81	114	12	45	50	200	4x3x4x11x2x3x1x6	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATATGAGCAATTG    81        
                            ||||X||X|||X||||||||||X|X||XX|||||
T:               -----------CATCaCTgGTCaCGTGTGACTGtCgAAtaTGAGC-----
R:         12   T13020322031313231230122131111212132120203122301111    45        
--
>104_1326_1825_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010300301021123203111011110111222302333333322    36        
--
>104_1449_1504_F3	ENSMUST00000113126	-	2602	2626	14	38	50	176	1x8x12G3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X|||||||X||||||||||| |||
T:               -------------AgACAGAGGtGTGGTGTGGTGGCAG------------
R:         14   T23102010303101121122203111011110110312222322020022    38        
--
>104_1688_3916_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	x5x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               X||||X||X|||||||||||||X|||
T:               --------------gACAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23302010300301321123203111011110111202003123213002    40        
--
>104_1714_3768_F3	ENSMUST00000113126	-	2584	2614	17	47	50	170	2x11x2x3x1x3x6x3	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTTGCCAAG    2584      
                                 ||X||||||||||X|X||XX||X|||||X||
T:               ----------------GGtGTGGTGTCAGgGtGCtgGGtACCTTgCC---
R:         17   T00133031111202232031110111212100131300231020030020    47        
--
>104_2518_2297_F3	ENSMUST00000113126	-	2601	2624	16	39	50	180	4x3x12x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                ||||X||X|||||||||||X||||
T:               ---------------ACAGaGGtGTGGTGTGGTGtCAGG-----------
R:         16   T23102010320301031123203111011110112212020233200230    39        
--
>104_2985_2254_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	12x6x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       ||||||||||||X|||||X||
T:               ----------------------ACACCACACCACaCCTCTgTC-------
R:         23   T23102010323000001113213111011110110102220123022221    43        
--
>104_4210_3575_F3	ENSMUST00000113126	-	705	753	2	50	50	208	1x2x4x6x10x1x1C3x6x2A3A1x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCGGCTC    705       
                  |X|X|||X|||||X|||||||||XX |||X|||||X| ||| |X|||||
T:               -CaGcAATaTGCAGgCAGTAGGCActCACAtTGTCAtTAAGCATcGGCTC
R:          2   T13020103031312231213203133211110112120302313330322    50        
--
>105_1373_3447_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T02330201030313112312320111101112011121322331113112    38        
--
>105_1561_1035_F3	ENSMUST00000113126	-	2069	2094	19	44	50	180	4x1x2x9x10	
G:       2094    ATGGATTCTCCCTTATCCAGCTCCAACCACAGCTTTTGTAATCTAAGGAG    2069      
                                   ||||XX|X||||||||X|||||||||
T:               ------------------AGCTccAaCCACAGCTtTTGTAATCT------
R:         19   T31330201030313112312320112101112321001130322202103    44        
--
>105_2112_3066_F3	ENSMUST00000113126	-	2602	2632	8	38	50	176	3x4x2x2T3x12x4	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                        |||X|||X|X| |||X|||||||||||X|||
T:               -------TGGtGTAgAcATAGGtGTGGTGTGGTGtCAG------------
R:          8   T33302010103113323133203111011110110212232332220200    38        
--
>105_2128_1522_F3	ENSMUST00000113126	+	2587	2619	5	37	50	176	2x2x3x4x7x2x9G3	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                     ||X|X||X|||X||||||X|X|||||||| |||
T:               ----AAgGtACcCAGcACCCTGaCaCCACACCAGACC-------------
R:          5   T13302010031301211100213131011110122101320320330332    37        
--
>105_2165_2939_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T02330201030313112312320111101112011121032300332133    38        
--
>105_4101_4182_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010300300131123203111011110111232200103331311    36        
--
>106_657_3443_F3	ENSMUST00000113126	-	2597	2620	20	43	50	180	15x1x5x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||||||||||||||XX||||X||
T:               -------------------AGGTGTGGTGTGGTGtcAGGGtGC-------
R:         20   T01002013323013320223201111011110113112003131332310    43        
--
>106_693_3012_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010300303331123203111011110111203333223221122    36        
--
>106_1244_4002_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	13x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||||X||||
T:               ----------------------ACACCACACCACAcCTCT----------
R:         23   T23302010000303332313203111011110111202220033032301    40        
--
>106_1831_1678_F3	ENSMUST00000113126	-	2601	2630	10	39	50	166	2x1x3C3x3x13x4	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                          ||XX|| |||X||X||||||||||||X|||
T:               ---------GTgtAGCCAGaGGtGTGGTGTGGTGTcAGG-----------
R:         10   T00103010311203230123203111011110111012030312031301    39        
--
>106_3421_2111_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	1x4x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               |X|||X||X||||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T23302010321201311123203111011110111213223232003112    37        
--
>107_401_1147_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	x6x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 X|||||X|||||||||||||
T:               ----------------cAGAGGtGTGGTGTGGTGTC--------------
R:         17   T23302010303303033122203111011110111221333322312332    36        
--
>107_692_1438_F3	ENSMUST00000113126	-	2600	2625	15	40	50	200	5x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||X|||||||||||||X|||
T:               --------------GACAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23302010300301121123203111011110111202000332321332    40        
--
>107_923_3172_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x6x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X|||||X|||
T:               -----------------CAGaGGTGTGGTGTgGTGTCaGGG---------
R:         18   T31330201030313112312320111101112011120200333023322    41        
--
>107_1099_4597_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111222232031110111232003113021210302312222    36        
--
>107_1342_3265_F3	ENSMUST00000113126	+	2583	2620	1	38	50	172	2x2x5x1x4x1x3G2T12x4	
G:       2583    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                 ||X|X||||XX|||XX|| || ||||||||||||X|||
T:               AGgCaAGGTacCCAgcACGCTTACACCACACCACaCCT------------
R:          1   T32133020100001311133203111011110112102333333302032    38        
--
>107_1428_3854_F3	ENSMUST00000113126	-	2601	2617	23	39	50	170	17	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                       |||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAGG-----------
R:         23   T23322011001103300333203111011110111212032302230120    39        
--
>107_1753_2991_F3	ENSMUST00000113126	-	2600	2622	18	40	50	190	5x15x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                  |||||X||||||||||||||X||
T:               -----------------AGAGGtGTGGTGTGGTGTCAgGG----------
R:         18   T23302010300301011322203111011110111210003333031322    40        
--
>107_1997_1577_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23102010321000001123203111011110111202331323033323    36        
--
>107_2001_4431_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111202232031110111232003113003130102202220    36        
--
>107_2226_1565_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T23302010300003030313203111011110111212331023233112    38        
--
>107_2344_2357_F3	ENSMUST00000113126	-	2599	2625	15	41	50	190	3x2x3x8x11	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               |||X|X||X|||||||X||||||||||
T:               --------------GACaGaGGtGTGGTGTgGTGTCAGGGT---------
R:         15   T23302010303331121323203111011120111212001333320331    41        
--
>107_2820_892_F3	ENSMUST00000113126	-	2600	2626	14	40	50	190	1x2x3x3x18	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              |X|X||X||X|||||||||||||||||
T:               -------------AgAcAGaGGtGTGGTGTGGTGTCAGGG----------
R:         14   T23302010300001322123203111011110111212002333012131    40        
--
>107_3247_1190_F3	ENSMUST00000113126	+	2595	2618	13	36	50	180	5x5x2x12	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2618      
                             |||||X||||X|X|||||||||||
T:               ------------CAGCAcCCTGaCaCCACACCACAC--------------
R:         13   T13020103031311231200213101011110111111303333311023    36        
--
>107_3636_4483_F3	ENSMUST00000113126	+	2606	2622	24	40	50	170	17	
G:       2606    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                        |||||||||||||||||
T:               -----------------------CACCACACCACACCTCT----------
R:         24   T23302010301000021123203311011110111102222130230120    40        
--
>107_3783_2328_F3	ENSMUST00000113126	-	2600	2627	13	40	50	186	2x8x11C2x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                             ||X|||||||X|||||||||| ||X|||
T:               ------------TAgACAGAGGtGTGGTGTGGTCTCaGGG----------
R:         13   T23102010300333321122203111011110122232003013210313    40        
--
>107_3809_2358_F3	ENSMUST00000113126	+	2593	2616	11	34	50	180	4x1x7x12	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                           ||||XX||||||X|||||||||||
T:               ----------CCCAgcACCCTGaCACCACACCAC----------------
R:         11   T23302010300001301100213111011110113231301300121321    34        
--
>107_3869_1755_F3	ENSMUST00000113126	-	2594	2612	22	40	50	170	13x6	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGAAATCCCTCA    2594      
                                      |||||||||||||X|||||
T:               ---------------------TGTGGTGTCAGGGtGCTGG----------
R:         22   T02302010331311231232031110111212002132103103301113    40        
--
>108_644_4216_F3	ENSMUST00000113126	-	2597	2625	15	43	50	176	2x3x3x11x5C4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               ||X||X||X||||||||||X|||| ||||
T:               --------------GAcAGaGGtGTGGTGTGGTgTCAGCGTGC-------
R:         15   T2310101330313112312020011101111010121233113312330.    43        
--
>108_722_4206_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x3x5x1x2x13x2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X||||||||||||X|X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAaTCT-----------
R:          9   T0013303111120223203111011123200013313223011100230.    39        
--
>108_882_2547_F3	ENSMUST00000113126	+	1687	1706	26	45	50	160	3x4x13	
G:       1687    CAGGTGGACCGGAGTCCACCAGCATCCTGTAGTGCCGAGACCCGCAGGCA    1706      
                                          |||X|||X||||||||||||
T:               -------------------------CCTgTAGtGCCGAGACCCGC-----
R:         26   T0213020103031311231232331102213231303222100332121.    45        
--
>108_1491_3076_F3	ENSMUST00000113126	-	2602	2629	11	38	50	200	4x2x3x3x16	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||||X|X||X||X|||||||||||||||
T:               ----------TGTAgAcAGaGGtGTGGTGTGGTGTCAG------------
R:         11   T2330201130311332312320311101111011121220303021102.    38        
--
>108_1886_1869_F3	ENSMUST00000113126	-	2600	2627	13	40	50	166	1x3x3x3x14C3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                             |X||X||X||X||||||||||||| |||
T:               ------------TaGAcAGaGGtGTGGTGTGGTGTCCGGG----------
R:         13   T2310201030000122012320311101111011120300323203111.    40        
--
>108_1954_3038_F3	ENSMUST00000113126	-	2596	2624	16	44	50	176	x7x14x2A2x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                X||||||X|||||||||||||X| ||X||
T:               ---------------aCAGAGGtGTGGTGTGGTGTCaGAGTgCT------
R:         16   T2310201330030111112220311101111011120222133202131.    44        
--
>108_1986_1888_F3	ENSMUST00000113126	-	1005	1030	15	40	50	166	2x2A3x5x13	
G:       1030    TACTCTTTATCGTGTGCTTCTCCAGGCGGTACTGAGGGCCGTAGAGGATT    1005      
                               ||X| |||X||||X||||||||||||
T:               --------------TGcTACTCcAGGCgGTACTGAGGGCC----------
R:         15   T3023312313300331123122112031013121220030121023010.    40        
--
>108_3207_1919_F3	ENSMUST00000113126	-	2070	2089	24	43	50	160	2x9x9	
G:       2089    ATGGATTCTCCCTTATCCAAGTACAACCACAGCTTTTGTAATCGAAGGAG    2070      
                                        ||X||||||||X||||||||
T:               -----------------------CAaCCACAGCTtTTGTAATC-------
R:         24   T1333020103031301231232031110111232100113032333301.    43        
--
>109_455_2464_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	1x4x3x14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |X|||X||X|||||||||||||X||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCaGG-----------
R:         15   T23302020303201011123203111011110111232012323220302    39        
--
>109_998_3839_F3	ENSMUST00000113126	-	2591	2617	23	49	50	156	13x3x1C1x2x6	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                                       |||||||||||||X||X |X|X|||||
T:               ----------------------TGTGGTGTGGTGTcAGgCTgCtGGGTA-
R:         23   T23101010301000320323203111011110111012232330100132    49        
--
>109_1231_2101_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	6x11x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 ||||||X||||||||||X|||
T:               ----------------CAGAGGtGTGGTGTGGTgTCA-------------
R:         17   T10301010303001313122202111011110131210203102312132    37        
--
>109_1237_3447_F3	ENSMUST00000113126	-	2598	2623	17	42	50	200	x3x3x20	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                 X||X||X|||||||||||||||||||
T:               ----------------cAGaGGtGTGGTGTGGTGTCAGGGTG--------
R:         17   T23102010301000320123203111011110111212001121030333    42        
--
>109_1843_1565_F3	ENSMUST00000113126	-	2595	2624	16	45	50	166	1x3x3x15x1C3x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                |X||X||X||||||||||||||X |||X||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCAgCGTGcTG-----
R:         16   T13101010301301002123203111011110111213331122120300    45        
--
>110_312_4859_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111202232031110111232000133011030321202120    36        
--
>110_735_3335_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	x7x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                X||||||X|||||||||||||
T:               ---------------aCAGAGGtGTGGTGTGGTGTC--------------
R:         16   T23302010303301131122203111011110111223303222320032    36        
--
>110_1270_4376_F3	ENSMUST00000113126	-	2597	2620	19	42	50	180	3x8x10x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||X|||||||||X||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGtGC--------
R:         19   T23320103031310231232031110111201112120031303021121    42        
--
>110_1710_2964_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T23102013303301121333203111011110111212323130321310    38        
--
>110_2285_1735_F3	ENSMUST00000113126	-	2069	2099	9	39	50	190	1x8x1x2x12x4x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X|||||||||||X|||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAAtCT-----------
R:          9   T00133031111222232031110111232000213002230321312122    39        
--
>110_2853_3463_F3	ENSMUST00000113126	-	2599	2617	23	41	50	170	12x7	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                       ||||||||||||X||||||
T:               ----------------------TGTGGTGTGGTGtCAGGGT---------
R:         23   T23310010101002002113203111011110113212001033002321    41        
--
>110_3400_5015_F3	ENSMUST00000113126	-	2586	2614	20	48	50	176	2x13x4T3x2x4	
G:       2614    TAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTTGCA    2586      
                                    ||X||||||||||||X||| |||X|X|||
T:               -------------------GGtGTGGTGTCAGGGtGCTTGGTaCcTTG--
R:         20   T31020103031310231232031110111212002132010111120112    48        
--
>110_4107_2636_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010300201021123203111011110111232230303131223    36        
--
>111_789_809_F3	ENSMUST00000113126	-	2602	2632	8	38	50	170	1x4x2x5x1x2x12x4	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                        |X|||X|X||||XX|X|||||||||||X|||
T:               -------TgGTGtAgACAGagGtGTGGTGTGGTGtCAG------------
R:          8   T33302010301103321123003111011110110212230032013202    38        
--
>111_1102_3879_F3	ENSMUST00000113126	-	2600	2624	16	40	50	190	4x3x13x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                ||||X||X||||||||||||X||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTcAGGG----------
R:         16   T23302010303001301123203111011110111312002011322312    40        
--
>111_1422_1381_F3	ENSMUST00000113126	+	2610	2629	30	49	50	180	17x3	
G:       2610    AAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACAC    2629      
                                              |||||||||||||||||X||
T:               -----------------------------ACACCACACCTCTGTCTaCA-
R:         30   T32033131130200000013313210222311101111022211221113    49        
--
>111_1794_3674_F3	ENSMUST00000113126	-	2597	2623	18	44	50	190	3x3x8x2x11	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                  |||X||X|||||||X|X||||||||||
T:               -----------------CAGaGGtGTGGTGTgGtGTCAGGGTGC------
R:         18   T02330201030313112312320311101112021121200113312110    44        
--
>111_2657_2243_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T20302010303301123113203111011110111212223013301301    38        
--
>111_2758_3303_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x8x8	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X|||||||X|||||||
T:               ------------GAGCTccAaCCACAGCtTTTGTAA--------------
R:         13   T00133031111212232031110111233000113012020331112122    36        
--
>111_2918_3030_F3	ENSMUST00000113126	-	2603	2624	16	37	50	180	4x3x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                ||||X||X||||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCA-------------
R:         16   T23302010303303311123203111011110111211030333110110    37        
--
>111_2950_1497_F3	ENSMUST00000113126	-	2596	2617	23	44	50	180	17x2x3	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                       |||||||||||||||||X|X||
T:               ----------------------TGTGGTGTGGTGTCAGGgTgCT------
R:         23   T13201030310212312033203111011110111212021232223110    44        
--
>111_3280_1683_F3	ENSMUST00000113126	-	2594	2617	23	46	50	160	13x4x2x2x3	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                       |||||||||||||X|||X|X|X||
T:               ----------------------TGTGGTGTGGTGTcAGGgTgCtGG----
R:         23   T23302010323301201333203111011110111012021333101123    46        
--
>111_3385_5011_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x11x2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||||||X|X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAAT-------------
R:          9   T00133031111222232031110111232003103030030220133222    37        
--
>111_3831_2803_F3	ENSMUST00000113126	-	2602	2624	16	38	50	176	4x2C16	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                ||||X| ||||||||||||||||
T:               ---------------ACAGaGCTGTGGTGTGGTGTCAG------------
R:         16   T23302010303201011123232111011110111212320203020022    38        
--
>112_102_3935_F3	ENSMUST00000113126	-	2597	2625	16	44	50	190	2x3x11x8x1x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                ||X||X||||||||||X|||||||XX|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAGggTGC------
R:         16   T31330201030313312312320111101112011121212113031313    44        
--
>112_120_2362_F3	ENSMUST00000113126	+	2605	2627	23	45	50	176	8x11A3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       ||||||||X|||||||||| |||
T:               ----------------------ACACCACAcCACACCTCTGACTA-----
R:         23   T33102013303303301203203111011130111102221212322222    45        
--
>112_689_4551_F3	ENSMUST00000113126	-	2596	2623	17	44	50	186	3x3x8x10C3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 |||X||X|||||||X||||||||| |||
T:               ----------------CAGaGGtGTGGTGTgGTGTCAGGGCGCT------
R:         17   T23302010300101123123203111011120111212003332221302    44        
--
>112_725_2438_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T02330201030313112312320111101112011121332233132133    38        
--
>112_743_179_F3	ENSMUST00000113126	-	2599	2623	18	42	50	170	3x7x2x10x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |||X||||||X|X|||||||||X||
T:               -----------------CAGaGGTGTGgTgTGGTGTCAGgGT--------
R:         18   T12330201030313312012320111111011011121230103312210    42        
--
>112_1074_2903_F3	ENSMUST00000113126	-	2596	2620	19	43	50	176	3C7x11x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   ||| |||||||X||||||||||X||
T:               ------------------AGGCGTGGTGTgGTGTCAGGGTgCT-------
R:         19   T13020103031310231232033110111201112120013323100222    43        
--
>112_1367_15_F3	ENSMUST00000113126	-	2160	2182	27	49	50	170	x6x1x16	
G:       2182    ATAAGTTTGGCTTCAGTACTTTGGCCTAGTAAGATGCTATTCTCAAAGCT    2160      
                                           X|||||XX|||||||||||||||
T:               --------------------------tAGTAAgaTGCTATTCTCAAAGC-
R:         27   T00133031111222232031113111232130133132330222100232    49        
--
>112_1630_1225_F3	ENSMUST00000113126	-	2601	2620	20	39	50	180	3x17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||X||||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAGG-----------
R:         20   T33302010333000022123203111011110111212030233213313    39        
--
>112_1661_3331_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010323101001123203111011110111232133133130030    36        
--
>112_2459_2608_F3	ENSMUST00000113126	-	2597	2623	16	42	50	170	3x3x8x8x2x3	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                |||X||X|||||||X|||||||X|X||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGgGtGC--------
R:         16   T13020103031311231232031110111201112123001303303111    42        
--
>112_2599_1948_F3	ENSMUST00000113126	-	77	110	16	49	50	200	3x2x2x13x3x2x6x3	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCTAGAG    77        
                                |||X|X|X||||||||||||X||X|X|||||X||
T:               ---------------ACTgGtCaCGTGTGACTGTCgAAtAtGAGCTaGA-
R:         16   T33302210331313231230222131111212112120031122320222    49        
--
>112_3258_1917_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010300301321123203111011110111200320133200213    36        
--
>112_4123_2337_F3	ENSMUST00000113126	-	2596	2620	20	44	50	176	3x13x3C5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||X||||||||||||X|| |||||
T:               -------------------AGGtGTGGTGTGGTGTcAGCGTGCT------
R:         20   T23302310121300033123203111011110111112331132223133    44        
--
>113_1946_4539_F3	ENSMUST00000113126	-	2587	2615	15	43	50	170	1x2x13x1x4x5x3	
G:       2615    CAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTACCTTTCAAAGA    2587      
                               |X|X||||||||||||XX|||X||||X||
T:               --------------TgGtGTGGTGTCAGGGtgCTGgGTACcTT-------
R:         15   T01030311112312320311101112120003321301313203111220    43        
--
>113_3380_1121_F3	ENSMUST00000113126	-	91	124	2	35	50	180	5x2x1x2x4x3x2x2x13	
G:        124    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                  |||||X|XX|X|||X||X|X|X||||||||||||
T:               -ATTCCtGtgTcATCaCTgGtCaCGTGTGACTGTC---------------
R:          2   T03302011031313231230223131111212112122030213120222    35        
--
>114_215_4315_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111232232031110111232000113011110303321113    36        
--
>114_1108_3279_F3	ENSMUST00000113126	-	2602	2624	16	38	50	190	1x6x16	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                |X|||||X|||||||||||||||
T:               ---------------AcAGAGGtGTGGTGTGGTGTCAG------------
R:         16   T21102010301001012122203111011110111212200333333123    38        
--
>114_2354_986_F3	ENSMUST00000113126	-	2074	2099	15	40	50	160	1x3x5x1x11x5	
G:       2099    CATGGATTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGA    2074      
                               |X||X||||XX||||||||||X||||
T:               --------------CtGAgAGCTccAACCACAGCTtTTGT----------
R:         15   T33233020111033311232232031010111232100112323033303    40        
--
>115_760_1504_F3	ENSMUST00000113126	-	719	754	1	36	50	226	x4x4x6x12x3G6	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                 X|||X|||X|||||X|||||||||||X|| ||||||
T:               tCAGcAATaTGCAGgCAGTAGGCACTgACGTTGTCA--------------
R:          1   T12120103031312231213203112221310112112231300220133    36        
--
>115_1426_5051_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	4x3x11x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                ||||X||X||||||||||X||||
T:               ---------------ACAGaGGtGTGGTGTGGTgTCAG------------
R:         16   T23102010300301011123203111011110121212202110030022    38        
--
>115_1773_303_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000131012130211032321    33        
--
>116_1159_4818_F3	ENSMUST00000113126	-	46	66	19	39	50	170	2x7x12	
G:         66    TTGAAATTGTAAATGACTGATTGTCCAAGAAGGCCATCCCACATATTCAA    46        
                                   ||X||||||X|||||||||||
T:               ------------------GAtTGTCCAaGAAGGCCATCC-----------
R:         19   T21301103033311231232001120112202030132003103322202    39        
--
>116_2128_4843_F3	ENSMUST00000113126	-	2593	2612	24	43	50	160	11x2x7	
G:       2612    TCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGAATCCCT    2593      
                                        |||||||||||X|X||||||
T:               -----------------------TGTGGTGTCAGgGtGCTGGG-------
R:         24   T31030201030313112312023311101112122031321003323132    43        
--
>116_3584_407_F3	ENSMUST00000113126	-	2602	2617	23	38	50	160	16	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                       ||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAG------------
R:         23   T23322010321023320103203111011110111212220130120222    38        
--
>117_432_2852_F3	ENSMUST00000113126	-	2598	2625	16	43	50	180	2x3x11x7x1x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                ||X||X||||||||||X||||||XX|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAggGTG-------
R:         16   T02330201030313312312320111101112011121330112333001    43        
--
>117_519_4630_F3	ENSMUST00000113126	-	2596	2629	11	44	50	180	4x1x6x1x1x7x9x2x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                           ||||XX|||||XXX||||||X||||||||X|X||
T:               ----------TGTAgaCAGAGgtgTGGTGTgGTGTCAGGgTgCT------
R:         11   T21103010303113011122233011011120111212021332330102    44        
--
>117_1635_4237_F3	ENSMUST00000113126	-	730	750	5	25	50	170	4x5x12	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||X||||X|||||||||||
T:               ----CAATaTGCAgGCAGTAGGCAC-------------------------
R:          5   T10232103031313031213203111010200112312331232230222    25        
--
>117_2125_459_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113002130022332232    36        
--
>117_3239_3041_F3	ENSMUST00000113126	-	2602	2622	21	41	50	170	x10x11	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                     X|||||||||X||||||||||
T:               --------------------aGAGGTGTGGtGTGGTGTCAG---------
R:         21   T10330033133020103033022201111031110111212230322213    41        
--
>118_709_3220_F3	ENSMUST00000113126	+	2605	2629	23	47	50	210	x18x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                       X|||||||||||||||||X||||||
T:               ----------------------aCACCACACCACACCTCTgTCTACA---
R:         23   T11131010013212312133203111011110111102223122311010    47        
--
>118_953_1023_F3	ENSMUST00000113126	-	2596	2620	24	48	50	170	2x4x2x13x4	
G:       2620    AAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAA    2596      
                                        ||X|||X|X||||||||||||X|||
T:               -----------------------AGgTGTgGtGTGGTGTCAGGGtGCT--
R:         24   T10122331113302010303312123111203111011121200213220    48        
--
>118_2570_2581_F3	ENSMUST00000113126	-	1435	1463	12	40	50	156	x13x2x1x2x6T4	
G:       1463    CAAAAACAAAGTGCGTCGGACTCGAAGTACAGGTGCTTGTTCCAGAAGGA    1435      
                            X||||||||||||X|XX|X||||| ||||
T:               -----------tGCGTCGGACTCGaAgtAcAGGTGTTTGT----------
R:         12   T30030201030313312302122330133312011100110002310212    40        
--
>118_3021_9_F3	ENSMUST00000113126	-	912	941	15	44	50	186	3x4G6x8x2x6	
G:        941    CAGGCAGATTACAACTTTGTGTTGTCTACTTGGATAAGGGAGAATTTAGG    912       
                               |||X||| ||||||X|||||||X|X|||||
T:               --------------CTTtGTGGTGTCTAcTTGGATAaGgGAGAA------
R:         15   T01030301112322320311101112230201023312202220133303    44        
--
>119_325_4072_F3	ENSMUST00000113126	+	2595	2627	13	45	50	176	1x4G3x3x5x5x2x9	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                             |X||| |||X||X||||X||||X|X||||||||
T:               ------------CaGCAGCCTgACaCCACaCCACaCcTCTGTCTA-----
R:         13   T31000101031310231230202131011210112122221122302222    45        
--
>119_856_2251_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23332010301302333123203111011110111211231303230012    37        
--
>119_928_4745_F3	ENSMUST00000113126	-	2600	2622	21	43	50	170	1x9x9x4	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                     |X||||||||X||||||||X|||
T:               --------------------AgAGGTGTGGtGTGGTGTCaGGG-------
R:         21   T12221122233022302030012201111031110111232003032211    43        
--
>119_1509_2581_F3	ENSMUST00000113126	+	2591	2629	9	47	50	176	1x4x1x1A6x12x2x2x3x3x3	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                         |X|||XX ||||||X|||||||||||X|X|X||X||X||
T:               --------TaCCCagAACCCTGaCACCACACCACaCcTcTGtCTaCA---
R:          9   T23322010321000020100213111011110112132021322211022    47        
--
>119_2316_1264_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	2x6x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               ||X|||||X||||||||||||
T:               --------------GAcAGAGGtGTGGTGTGGTGT---------------
R:         15   T23320010323133323122203111011110111313232310130002    35        
--
>119_3342_1065_F3	ENSMUST00000113126	+	2589	2631	7	49	50	182	2x1x4C1x3x1x2T12x5x1x2x7	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                       ||XX||| |X||XX| ||||||||||||X||||XX|X||||||
T:               ------GGtaCCCCGcACccTTACACCACACCACaCCTCtgTcTACACC-
R:          7   T13301010301000301123203111011110110102233132311103    49        
--
>119_3857_900_F3	ENSMUST00000113126	-	2590	2612	24	46	50	170	11x2x4x6	
G:       2612    TCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCCCT    2590      
                                        |||||||||||X|X|||X|||||
T:               -----------------------TGTGGTGTCAGgGtGCTgGGTAC----
R:         24   T12130201030313112312320311101112121021323001313110    46        
--
>120_480_2888_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111222232031110111202000113000110203332212    36        
--
>120_594_1923_F3	ENSMUST00000113126	+	2589	2620	7	38	50	166	2x3x2x5x1x2T12x4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                       ||X||X|X||||XX| ||||||||||||X|||
T:               ------GGtACcCaGCACccTTACACCACACCACaCCT------------
R:          7   T23302010031303231123203111011110112102030123233102    38        
--
>120_955_3167_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000112000123323302222    34        
--
>120_1780_3583_F3	ENSMUST00000113126	-	2601	2622	18	39	50	180	5x14x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  |||||X|||||||||||||X||
T:               -----------------AGAGGtGTGGTGTGGTGTCaGG-----------
R:         18   T23321010323303112322203111011110111232022232212103    39        
--
>120_2052_4170_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23301010301303301123203111011110111232203330020122    36        
--
>120_3019_1096_F3	ENSMUST00000113126	-	2591	2614	17	40	50	180	11x5x3x5	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                 |||||||||||X||||X||X||||
T:               ----------------GGTGTGGTGTCaGGGTgCTgGGTA----------
R:         17   T00133031111202232011110111232001032000133213301221    40        
--
>121_2480_2803_F3	ENSMUST00000113126	-	2601	2623	17	39	50	190	6x13x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 ||||||X||||||||||||X|||
T:               ----------------CAGAGGtGTGGTGTGGTGTcAGG-----------
R:         17   T23302010301003002122203111011110111312023232310323    39        
--
>121_3694_4109_F3	ENSMUST00000113126	+	2610	2627	23	40	50	160	11x7	
G:       2610    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2627      
                                       |||||||||||X||||||
T:               ----------------------ACACCACACCTcTGTCTA----------
R:         23   T01122010303310300233203111011110202112232213001012    40        
--
>122_772_4492_F3	ENSMUST00000113126	-	2061	2095	13	47	50	196	5x1x2x13x3x4x3C3	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                             |||||XX|X||||||||||||X||X|||X|| |||
T:               ------------GAGCTccAaCCACAGCTTTTGtAAtCTGcCTCTTC---
R:         13   T00133131111202232031110111232000123022211022202222    47        
--
>122_935_2242_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T13302010300203310123203111011110111212231300322211    38        
--
>122_1387_4562_F3	ENSMUST00000113126	-	2588	2614	22	48	50	190	13x2x6x2x4	
G:       2614    TCTAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTCT    2588      
                                      |||||||||||||X|X|||||X|X|||
T:               ---------------------GGTGTGGTGTCAGgGtGCTGGgTaCCT--
R:         22   T02030201030313312312320111101112121021321021210212    48        
--
>122_1601_4711_F3	ENSMUST00000113126	-	2590	2621	19	50	50	186	1x3x16x1T5x1x4	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                                   |X||X|||||||||||||||X |||||XX|||
T:               ------------------GaGGtGTGGTGTGGTGTCAGgTTGCTGggTAC
R:         19   T01002013300013020213203111011110111212210132121131    50        
--
>122_1636_3298_F3	ENSMUST00000113126	+	2598	2621	16	39	50	166	4x2T13x4	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                ||||X| |||||||||||||X|||
T:               ---------------CACCcTTACACCACACCACAcCTC-----------
R:         16   T23302010302303021103203111011110111002213332222232    39        
--
>122_1994_2084_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302010300301013123203111011110111212233231301102    38        
--
>122_2654_3367_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	2x3x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X|||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T23301010323331022123202111011110111212322223330121    38        
--
>122_3320_3079_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T02330201030313112312320111101112011121330121330031    38        
--
>123_134_3946_F3	ENSMUST00000113126	-	2071	2095	13	37	50	170	5x1x2x11x6	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                             |||||XX|X||||||||||X|||||
T:               ------------GAGCTccAaCCACAGCTTTtGTAAT-------------
R:         13   T00133031111212232031110111232003113030230322330022    37        
--
>123_167_953_F3	ENSMUST00000113126	-	85	116	11	42	50	206	2x2x5x13x6T3	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATT    85        
                           ||X|X||||X||||||||||||X||||| |||
T:               ----------GTcAtCACTgGTCACGTGTGACtGTCGATTAT--------
R:         11   T13302013303131021123012113111121111232303333121223    42        
--
>123_325_1870_F3	ENSMUST00000113126	-	2604	2623	18	37	50	180	14x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                  ||||||||||||||X|||||
T:               -----------------CAGAGGTGTGGTGTgGTGTC-------------
R:         18   T02330201030313112312220111101112011122232013023202    37        
--
>123_1388_585_F3	ENSMUST00000113126	-	2596	2616	20	40	50	170	2x13x6	
G:       2616    TCTAAACAATCAGCCCAGGGTGGTGTGGTGTCAGGGTGCTAAAAATCCCT    2596      
                                    ||X||||||||||||X|||||
T:               -------------------GTgGTGTGGTGTCAGgGTGCT----------
R:         20   T02030201030313302312100111101112121011320032022210    40        
--
>123_3544_1810_F3	ENSMUST00000113126	-	2602	2623	17	38	50	200	6x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 ||||||X|||||||||||||||
T:               ----------------CAGAGGtGTGGTGTGGTGTCAG------------
R:         17   T13030010303003320122203111011110111212220221002022    38        
--
>123_3946_1562_F3	ENSMUST00000113126	-	2602	2629	11	38	50	160	2x2x2x3x3x10x6	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||X|X|X||X||X|||||||||X|||||
T:               ----------TGtAgAcAGaGGtGTGGTGTGGtGTCAG------------
R:         11   T23302013323133323123203111011110211212330333032023    38        
--
>123_4064_2131_F3	ENSMUST00000113126	-	333	362	14	43	50	166	x5x11C1x2x2x8	
G:        362    AGACCTCACCATGATTTTTGCATTTGATCTGGTTTTGTCTCTCGGCCACA    333       
                              X||||X|||||||||| |X|X|X|||||||
T:               -------------aTTTTtGCATTTGATCCGgTtTtGTCTCTC-------
R:         14   T10123330133020300031313001232031110111222223122222    43        
--
>124_2395_430_F3	ENSMUST00000113126	+	450	487	2	39	50	192	1x3A1T3x10x7x3x3x5	
G:        450    AAGTTCAGGCAAGCAGTCCATATTGTCTGTACGCCTGGAGCAGTGCCCTC    487       
                  |X|| | |||X|||||||||X||||||X||X||X||||
T:               -AgTTAATGCAaGCAGTCCATaTTGTCTgTAcGCcTGGA-----------
R:          2   T12010303131123121201303011223130332210212020002122    39        
--
>124_3290_2958_F3	ENSMUST00000113126	-	1432	1464	5	37	50	170	1x3x4x2x4x3x9x2x5	
G:       1464    CAAACTGCGTCGGACTCGAAGTACAGGTGCTTGTAGTAGAAGGAGAAGAA    1432      
                     |X||X|||X|X|||X||X||||||||X|X||||
T:               ----CtGCgTCGgAcTCGaAGtACAGGTGCtTgTAGT-------------
R:          5   T01030313112312322330203112011310213210000033322121    37        
--
>125_1084_2583_F3	ENSMUST00000113126	-	2601	2624	16	39	50	160	x4x3x14x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                X|||X||X|||||||||||||X||
T:               ---------------aCAGaGGtGTGGTGTGGTGTCaGG-----------
R:         16   T23302010300331131123203111011110111202031322001021    39        
--
>125_1841_2455_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111232232031110111232300113000310213331223    36        
--
>125_2006_4613_F3	ENSMUST00000113126	+	2604	2631	22	49	50	206	1x15x3C8	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                                      |X||||||||||||||X|| ||||||||
T:               ---------------------GaCACCACACCACACCtCTCTCTACACC-
R:         22   T31330201030313312313303111011110111103222222311100    49        
--
>125_2043_1869_F3	ENSMUST00000113126	-	2594	2625	15	46	50	186	5x3x14x2A2x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                               |||||X||X|||||||||||||X| ||X|X||
T:               --------------GACAGaGGtGTGGTGTGGTGTCaGAGTgCtGG----
R:         15   T23302010300030021123203111011110111232221033102011    46        
--
>126_1251_3073_F3	ENSMUST00000113126	-	2603	2620	20	37	50	160	3x15	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    |||X||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCA-------------
R:         20   T23031010300033323123203111011110111213213330310233    37        
--
>126_1644_3355_F3	ENSMUST00000113126	-	1736	1757	18	39	50	180	2x12x8	
G:       1757    GTGCAGTTAGGTATCTCAATCGCACCCCTACCTCTAAACCCTGTTACGAA    1736      
                                  ||X|||||||||||X|||||||
T:               -----------------AAtCGCACCCCTACcTCTAAAC-----------
R:         18   T23102020101031311200233110002311222300112223232222    39        
--
>126_2411_787_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x10x6x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||X|||||X||
T:               ----------------CAGaGGtGTGGTGTGGtGTCAGgGT---------
R:         17   T20001010300020023123203111011110011212201013131220    41        
--
>126_2447_4305_F3	ENSMUST00000113126	+	487	510	16	39	50	166	10x8x2G3	
G:        487    TGTCTGTACGCCTGGAGCAGTGCCCTCTGCAGCTGAATAACCCCTTTAAT    510       
                                ||||||||||X|||||||X| |||
T:               ---------------AGCAGTGCCCtCTGCAGCtGGATA-----------
R:         16   T31330201030313112312113000221312331023330323013303    39        
--
>126_2625_3736_F3	ENSMUST00000113126	-	2068	2099	9	40	50	166	1x3x5x1x2x12x4A3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X|||||||||||X||| |||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAACTG----------
R:          9   T00133031111232232031110111232000013001210310302112    40        
--
>126_2860_1767_F3	ENSMUST00000113126	-	91	116	11	36	50	180	2x2x5x2x15	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATT    91        
                           ||X|X||||X|X||||||||||||||
T:               ----------GTcAtCACTgGtCACGTGTGACTGTC--------------
R:         11   T23302010303131121123022113111121211223321333231122    36        
--
>126_2893_2828_F3	ENSMUST00000113126	-	2602	2629	11	38	50	180	4x5x3x8x2x6	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||||X||||X||X|||||||X|X|||||
T:               ----------TGTAgACAGaGGtGTGGTGTgGtGTCAG------------
R:         11   T23032012003113321123203111011120211212222020031101    38        
--
>126_3639_2075_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111222232031110111222000113011230223332212    36        
--
>127_497_762_F3	ENSMUST00000113126	+	2604	2624	17	37	50	170	1x5x15	
G:       2604    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2624      
                                 |X||||X||||||||||||||
T:               ----------------GaCACCaCACCACACCTCTGT-------------
R:         17   T23302010300303030111103111011110222110213122212200    37        
--
>127_2104_3119_F3	ENSMUST00000113126	-	1999	2017	24	42	50	170	4x15	
G:       2017    GAAGAAAAGGATCCCAGAAAATTTACCCCAAAGAATGGTCCATGGAGAAG    1999      
                                        ||||X||||||||||||||
T:               -----------------------TACCcCAAAGAATGGTCCA--------
R:         24   T12323302010303031120113331010100220310120102303310    42        
--
>128_120_1617_F3	ENSMUST00000113126	-	845	868	25	48	50	186	4C7x12	
G:        868    TTTAACTGTGCCATTTGTTTAAATGTCAGACCAGGAGAGGAGTATTTTTC    845       
                                         |||| |||||||X|||||||||||
T:               ------------------------GTCACACCAGGAgAGGAGTATTTT--
R:         25   T2330010303131323121310311121111012020220221330003.    48        
--
>128_812_3766_F3	ENSMUST00000113126	+	762	797	1	36	50	172	x3x5x2G2x14x1C3x4	
G:        762    GGGGAGGTCGACACGGATTTTCCGCCACTGGATTCCAATGAGCCCATTCA    797       
                 X||X||||X| ||X|||||||||||||X |||X|||
T:               gGGgAGGTcGGCAcGGATTTTCCGCCAcCGGAtTCC--------------
R:          1   T3003220103031330230002033010030200200303322132222.    36        
--
>128_830_1464_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	5x3x12x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||X|||||||||||X|X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         15   T2330201332010302112320311101111011220200233223123.    40        
--
>128_1830_3643_F3	ENSMUST00000113126	+	1418	1450	1	33	50	196	2x4x2x3x1C17x3	
G:       1418    TCTAAGCAGCCATGACTACAAGCACCTGTACTTCGAGTCCGACGCAGCCA    1450      
                 ||X|||X|X||X |||||||||||||||||X||
T:               TCtAAGcAgCCaCGACTACAAGCACCTGTAcTT-----------------
R:          1   T0233020103031321231102311021133200303111132133212.    33        
--
>128_1878_3252_F3	ENSMUST00000113126	+	2595	2626	13	44	50	206	2x4x1x2T10x12	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                             ||X|||XX| ||||||||||X|||||||||||
T:               ------------CAgCACccTTACACCACACCaCACCTCTGTCT------
R:         13   T2230301030033103112320311101111021110222112213103.    44        
--
>128_2535_272_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x10x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||X|||||
T:               --------------GACAGaGGtGTGGTGTGGtGTCAG------------
R:         15   T2330201030333112112320311101111021121232232223022.    38        
--
>128_3385_2848_F3	ENSMUST00000113126	-	2600	2617	23	40	50	160	12x6	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                       ||||||||||||X|||||
T:               ----------------------TGTGGTGTGGTGtCAGGG----------
R:         23   T2331201032300032032320311101111011221200333322022.    40        
--
>128_4017_1634_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T0233020103031311231232011110111201112132323102222.    38        
--
>129_932_2113_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T2330201030313102312320311101111011121223333.220031    38        
--
>129_1608_536_F3	ENSMUST00000113126	-	1382	1404	18	40	50	170	1x9x8x5	
G:       1404    GAAATCAGGGCAGCAGTACACCGCGTGACTGGGGCTCTTCCACAGCCCAG    1382      
                                  |X||||||||X|||||||X||||
T:               -----------------AcACCGCGTGaCTGGGGCtCTTC----------
R:         18   T2022113301111231233110333111121000312202010.333331    40        
--
>129_1635_3907_F3	ENSMUST00000113126	-	2599	2623	17	41	50	176	6x12C2x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 ||||||X||||||||||| ||X|||
T:               ----------------CAGAGGtGTGGTGTGGTGCCAgGGT---------
R:         17   T2330201030020031012220311101111011301100133.113022    41        
--
>129_2987_2083_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	1x4x3x10x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |X|||X||X|||||||||X|||||
T:               --------------GaCAGaGGtGTGGTGTGGtGTCAG------------
R:         15   T3320201032300131112320311101111021121220321.220231    38        
--
>129_3069_3678_F3	ENSMUST00000113126	-	2606	2630	10	34	50	170	2x4x2x5x12	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                          ||X|||X|X||||X|||||||||||
T:               ---------GTgTAGaCaGAGGtGTGGTGTGGTG----------------
R:         10   T1302010303131323122220311101111011201223123.213220    34        
--
>129_3501_1266_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	x8x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X|||||||X|||||||||||||
T:               --------------gACAGAGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030120102112220311101111011123233022.233131    36        
--
>129_3541_3727_F3	ENSMUST00000113126	-	2601	2627	13	39	50	170	2x2x3x3x10x7	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                             ||X|X||X||X|||||||||X||||||
T:               ------------TAgAcAGaGGtGTGGTGTGGtGTCAGG-----------
R:         13   T2330201030323332312320311101111021121203333.031202    39        
--
>129_4096_579_F3	ENSMUST00000113126	+	1577	1599	28	50	50	200	6x17	
G:       1577    ACAAAGAAAACTGAACAGGCGAACAAGCTTCAGCTTCCAGAAGGAGAAGA    1599      
                                            ||||||X||||||||||||||||
T:               ---------------------------CTTCAGcTTCCAGAAGGAGAAGA
R:         28   T2022103231211231232031330111202122202012202.222022    50        
--
>130_523_1906_F3	ENSMUST00000113126	+	2590	2621	8	39	50	180	1x3x1x5x2x3x12x5	
G:       2590    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                        |X||XX||||X|X||X|||||||||||X||||
T:               -------GtACccAGCAcCcTGaCACCACACCACaCCTC-----------
R:          8   T23320133031311231203213111011110112102212211000023    39        
--
>130_2523_2784_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	5x14	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  |||||X|||||||||||||
T:               -----------------AGAGGtGTGGTGTGGTGTC--------------
R:         18   T23030210122312302222203111011110111233002023203233    36        
--
>131_599_2414_F3	ENSMUST00000113126	-	2593	2620	20	47	50	180	3x13x3x1x4x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                    |||X||||||||||||X||XX|||X|||
T:               -------------------AGGtGTGGTGTGGTGTcAGggTGCtGGG---
R:         20   T01331013313012312223203111011110111012231133100211    47        
--
>131_2315_4071_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	x5x3x10x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               X||||X||X|||||||||X|||||
T:               --------------gACAGaGGtGTGGTGTGGtGTCAG------------
R:         15   T13202010323001021123203111011110211212223222023220    38        
--
>131_4236_3402_F3	ENSMUST00000113126	-	2598	2618	26	46	50	170	4x2x15	
G:       2618    AAAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGAAAA    2598      
                                          ||||X|X||||||||||||||
T:               -------------------------GTGTgGtGTGGTGTCAGGGTG----
R:         26   T01331102323302010303112103111203111011121200110320    46        
--
>132_362_2546_F3	ENSMUST00000113126	-	2591	2614	17	40	50	180	11x5x5x3	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                 |||||||||||X||||X||||X||
T:               ----------------GGTGTGGTGTCaGGGTgCTGGgTA----------
R:         17   T00133031111202232011110111202001032101133210331131    40        
--
>132_3649_2319_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000132011010223312022    33        
--
>134_2772_1115_F3	ENSMUST00000113126	-	87	105	22	40	50	170	9x10	
G:        105    GCTCTGTATTTGAATTTTTAGTCACGTGTGACTGTCGAATCTTTGAAATT    87        
                                      |||||||||X|||||||||
T:               ---------------------TCACGTGTGaCTGTCGAAT----------
R:         22   T0223020103011231233122211311111121123203023323222.    40        
--
>134_4240_1558_F3	ENSMUST00000113126	+	2208	2231	3	26	50	160	2x12x2x2x6	
G:       2208    ATGTGCCCAGCGTAAGTGCATGCGTGGGTGCGTGCGTGCGTGCGTGCGTG    2231      
                   ||X|||||||||||X|X|X|||||
T:               --GTgCCCAGCGTAAGtGcAtGCGTG------------------------
R:          3   T0101030012331302010101331123023203111011123233302.    26        
--
>135_3531_1754_F3	ENSMUST00000113126	-	2601	2626	14	39	50	160	1x5x2x1x12x5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                              |X||||X|XX|||||||||||X||||
T:               -------------AgACAGaGgtGTGGTGTGGTGtCAGG-----------
R:         14   T23302010303031321123213111011110112212011233302212    39        
--
>136_891_2777_F3	ENSMUST00000113126	-	77	104	23	50	50	180	x9x8x3x1x7	
G:        104    GCTCTGTATTTGAATTTTTAGCCACGTGTGACTGTCGAATATGAGCTAGA    77        
                                       X||||||||X|||||||X||XX||||||
T:               ----------------------cACGTGTGAcTGTCGAAtATgaGCTAGA
R:         23   T23302012323131033123333113111120211232013323232322    50        
--
>136_2213_248_F3	ENSMUST00000113126	-	2595	2625	15	45	50	170	5x2x1x2x10x6x1x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               |||||X|XX|X|||||||||X|||||XX|||
T:               --------------GACAGaGgtGtGGTGTGGTGtCAGGGtgCTG-----
R:         15   T23302010303231021121233101011110112212002332133123    45        
--
>136_2237_3276_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X||X||||||||||||
T:               --------------GACAGaGGtGTgGTGTGGTGTCAG------------
R:         15   T23302010303331121121203113011110111212222332322022    38        
--
>136_2237_3417_F3	ENSMUST00000113126	-	2059	2099	9	49	50	176	1x3x5x1x2x14x2x3x1x1T3x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2059      
                         |X||X||||XX|X|||||||||||||X|X||XX |||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaAtCTgcTTGTtCAA-
R:          9   T00133031111202232031110111232000111002230201112102    49        
--
>136_3109_2144_F3	ENSMUST00000113126	-	2593	2625	14	46	50	190	2x3x3x8x2x8x4x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAATC    2593      
                              ||X||X||X|||||||X|X|||||||X|||X||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGGtGCTgGG----
R:         14   T12120103031313231232031110111202112120001322000322    46        
--
>137_83_1651_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000131000120230002002    33        
--
>137_902_3942_F3	ENSMUST00000113126	-	722	750	5	33	50	176	3A6x11x2x3x3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    722       
                     ||| ||||||X||||||||||X|X||X||
T:               ----CAAAATGCAGgCAGTAGGCACtGaCAtTG-----------------
R:          5   T23120100031312231213203111111100132310231230312231    33        
--
>137_1043_1449_F3	ENSMUST00000113126	-	2605	2623	18	36	50	170	14x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAA    2605      
                                  ||||||||||||||X||||
T:               -----------------CAGAGGTGTGGTGTgGTGT--------------
R:         18   T31330201030313112312220111101112011133131202223200    36        
--
>137_2110_1735_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000133330100203301033    33        
--
>137_2585_2889_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T11130332020003031303203111011110111212203232222322    38        
--
>137_3489_1491_F3	ENSMUST00000113126	-	2603	2625	14	36	50	170	2x3x3x15	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                              ||X||X||X||||||||||||||
T:               -------------GAcAGaGGtGTGGTGTGGTGTCA--------------
R:         14   T13020103031313231232031110111101112100133301110320    36        
--
>137_3654_4130_F3	ENSMUST00000113126	+	2349	2374	17	42	50	180	3x8x2x8x5	
G:       2349    CAGTGTCTCCAAGTGGTGCTGAGTTCCCAGCCAGGGTCTTCTCTCATCTC    2374      
                                 |||X|||||||X|X|||||||X||||
T:               ----------------TGCtGAGTTCCcAgCCAGGGTcTTCT--------
R:         17   T22010300131123320131122102011130120010202232002202    42        
--
>137_3780_1430_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111222232031110111232003113020331023132323    36        
--
>138_402_3869_F3	ENSMUST00000113126	-	2595	2620	19	44	50	166	3x8x2x8G4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                                   |||X|||||||X|X||||||| ||||
T:               ------------------AGGtGTGGTGTgGtGTCAGGGGGCTG------
R:         19   T23320103031310231232031110111202112120000321110213    44        
--
>138_1022_2984_F3	ENSMUST00000113126	-	2592	2614	17	39	50	190	2x9x12	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2592      
                                 ||X||||||||X|||||||||||
T:               ----------------GGtGTGGTGTCaGGGTGCTGGGT-----------
R:         17   T22103031311221232031110111232001132100111312312230    39        
--
>138_1047_2615_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T31330201030313312312320111101112011121330103321220    38        
--
>138_1923_498_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	4x1x3x12x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               ||||XX||X|||||||||||X||||
T:               --------------GACAgaGGtGTGGTGTGGTGtCAGG-----------
R:         15   T23122012321311121103203111011110110212020222300113    39        
--
>138_2829_2281_F3	ENSMUST00000113126	-	2598	2620	19	41	50	170	3x8x2x10	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                                   |||X|||||||X|X|||||||||
T:               ------------------AGGtGTGGTGTgGtGTCAGGGTG---------
R:         19   T23302103031310231232031110111202112120011223300222    41        
--
>138_3945_3888_F3	ENSMUST00000113126	-	2600	2621	24	45	50	160	1x8x9x4	
G:       2621    GAAAGAAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGGAAAA    2600      
                                        |X|||||||X||||||||X|||
T:               -----------------------GaGGTGTGGtGTGGTGTCaGGG-----
R:         24   T32123011232320201033303112011110311101112220032223    45        
--
>139_598_930_F3	ENSMUST00000113126	-	2590	2625	14	49	50	160	2x3x3x8x2x7x1x2x2x2x4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTACC    2590      
                              ||X||X||X|||||||X|X||||||XX|X|X|X|||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGgtGcTgGgTAC-
R:         14   T11220103031313231232031110111202112120331123031312    49        
--
>139_999_1672_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x13x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTcAGG-----------
R:         17   T33302010303301123123203111011110111312020333030210    39        
--
>139_1164_398_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	2x3x3x9x9	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               ||X||X||X||||||||X||||||||
T:               --------------GAcAGaGGtGTGGTGTGgTGTCAGGG----------
R:         15   T23300010303113123123203111011111111212003033022120    40        
--
>139_1936_3528_F3	ENSMUST00000113126	+	2603	2621	21	39	50	170	6x13	
G:       2603    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                     ||||||X||||||||||||
T:               --------------------TGACACcACACCACACCTC-----------
R:         21   T00133031111222232031112111211110111102230231232100    39        
--
>139_2473_2052_F3	ENSMUST00000113126	-	720	748	7	35	50	176	2x6x10x2C3x5	
G:        748    CCTTCTATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                       ||X|||||X|||||||||X| |||X||||
T:               ------ATaTGCAGgCAGTAGGCAcTCACAtTGTC---------------
R:          7   T10322013031312231213203102211110112013200333322122    35        
--
>139_2496_2146_F3	ENSMUST00000113126	+	2595	2626	13	44	50	166	1x4x2x2T12x5x2x3	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                             |X|||X|X| ||||||||||||X||||X|X||
T:               ------------CaGCAcCcTTACACCACACCACaCCTCtGtCT------
R:         13   T20020103031310231203203111011110112102231222032222    44        
--
>139_2969_3821_F3	ENSMUST00000113126	-	82	102	25	45	50	170	12x2x7	
G:        102    GCTCTGTATTTGAATTTTTAGCAACGTGTGACTGTCGAATATGAGAAATT    82        
                                         ||||||||||||X|X||||||
T:               ------------------------CGTGTGACTGTCgAaTATGAG-----
R:         25   T21131010303331123123022203111121211202333312200123    45        
--
>140_311_2580_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	1x5x3x13x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X||||X||X||||||||||||X||
T:               -------------AgACAGaGGtGTGGTGTGGTGTcAG------------
R:         14   T23302010303301321123203111011110111012323033231123    38        
--
>140_582_2687_F3	ENSMUST00000113126	-	2594	2623	17	46	50	206	3x3x15A3x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                 |||X||X|||||||||||||| |||X||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAAGGTgCTGG----
R:         17   T23122010303031313123203111011110111210201232103102    46        
--
>140_1422_3235_F3	ENSMUST00000113126	-	2599	2625	16	42	50	170	5x3x8x2x6x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                |||||X||X|||||||X|X|||||X||
T:               ---------------GACAGaGGtGTGGTGTgGtGTCAGgGT--------
R:         16   T30030201030313112112320311101112021121230101221223    42        
--
>140_1513_853_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000120300200310033313    33        
--
>140_1949_3059_F3	ENSMUST00000113126	-	2596	2623	16	43	50	180	3x3x8x2x8x4	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                |||X||X|||||||X|X|||||||X|||
T:               ---------------CAGaGGtGTGGTGTgGtGTCAGGGtGCT-------
R:         16   T23100103031311231232031110111202112120031323300220    43        
--
>140_2405_2907_F3	ENSMUST00000113126	-	2599	2623	16	40	50	170	3x3x8x2x9	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                |||X||X|||||||X|X||||||||
T:               ---------------CAGaGGtGTGGTGTgGtGTCAGGGT----------
R:         16   T13020103031311231232031110111202112120010302011010    40        
--
>140_2446_953_F3	ENSMUST00000113126	-	2602	2622	18	38	50	170	2x3x16	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||X|||||||||||||||
T:               -----------------AGaGGtGTGGTGTGGTGTCAG------------
R:         18   T10300010303331122023203111011110111212230230203122    38        
--
>140_2488_927_F3	ENSMUST00000113126	-	2595	2623	17	45	50	170	3x3x8x2x6x3x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                 |||X||X|||||||X|X|||||X||X|||
T:               ----------------CAGaGGtGTGGTGTgGtGTCAGgGTgCTG-----
R:         17   T23302010303131123123203111011120211212201032121002    45        
--
>140_3126_2425_F3	ENSMUST00000113126	-	2596	2630	10	44	50	176	2x4x2x1x1x3x13x3A5	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                          ||X|||X|XXX||X||||||||||||X|| |||||
T:               ---------GTgTAGaCagaGGtGTGGTGTGGTGTcAGAGTGCT------
R:         10   T13020103031313231203203111011110111312221132332121    44        
--
>140_4099_929_F3	ENSMUST00000113126	-	2592	2612	26	46	50	170	9x2x10	
G:       2612    ATTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCC    2592      
                                          |||||||||X|X|||||||||
T:               -------------------------TGTGGTGTCaGgGTGCTGGGT----
R:         26   T12123302010303131313123203111011120220113210010033    46        
--
>142_96_951_F3	ENSMUST00000113126	+	2694	2723	13	42	50	180	2x6x3x1x4x2x12	
G:       2694    GCCAGGGCCACAGCCGATATCTTATACGACCTGTGTTTAGGACATTTTTT    2723      
                             ||X|||||X||XX|||X|X|||||||||||
T:               ------------GCcGATATcTTatACGaCcTGTGTTTAGGA--------
R:         13   T02230201030313332333320013131112111100320223233003    42        
--
>142_977_3785_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	2x3x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X|||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T23302010300300020123203111011110111212220223223022    38        
--
>142_1053_4372_F3	ENSMUST00000113126	-	2072	2100	8	36	50	170	2x8x1x2x7x2x7	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                        ||X|||||||XX|X||||||X|X||||||
T:               -------TCtGAGAGCTccAaCCACAGcTtTTGTAA--------------
R:          8   T22103031211222232031110111202300113010320321211202    36        
--
>142_1100_3079_F3	ENSMUST00000113126	-	2599	2623	17	41	50	190	3x5x12x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||||X|||||||||||X||||
T:               ----------------CAGaGGTGtGGTGTGGTGTCaGGGT---------
R:         17   T23302010303203323123201121011110111232001033021132    41        
--
>142_1711_2174_F3	ENSMUST00000113126	-	2591	2620	19	48	50	180	1x2x8x10x1x2x6	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2591      
                                   |X|X|||||||X|||||||||XX|X|||||
T:               ------------------AgGtGTGGTGTgGTGTCAGGGtgCtGGGTA--
R:         19   T03120103031310231233031110111201112120030301001303    48        
--
>142_2227_4038_F3	ENSMUST00000113126	-	756	776	28	48	50	170	6x11x4	
G:        776    CGTAAGTGCATGCGTGGGTGCGTGCGTCGTGTCGACCTCCCCATCATCGC    756       
                                            ||||||X||||||||||X|||
T:               ---------------------------CGTGTCgACCTCCCCATcATC--
R:         28   T31233022133003311231232031133111202102200013313230    48        
--
>142_2909_2056_F3	ENSMUST00000113126	+	2595	2614	13	32	50	160	1x9x10	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2614      
                             |X||||||||X|||||||||
T:               ------------CaGCACCCTGaCACCACACC------------------
R:         13   T30120103031310231100213111011110312310203032033322    32        
--
>143_1922_503_F3	ENSMUST00000113126	+	2610	2624	23	37	50	150	15	
G:       2610    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2624      
                                       |||||||||||||||
T:               ----------------------ACACCACACCTCTGT-------------
R:         23   T13302010303013330323203111011110222113332323010101    37        
--
>143_2660_770_F3	ENSMUST00000113126	-	2970	2992	17	39	50	170	9x9x1x4	
G:       2992    GAAAATAGCCTTTTAATTTTAATATTGAATATGTGACAAGGCCTTCTTGG    2970      
                                 |||||||||X||||||||XX|||
T:               ----------------TTTTAATATtGAATATGTgaCAA-----------
R:         17   T11233031010003002000303331120333113111011121220120    39        
--
>143_3707_1409_F3	ENSMUST00000113126	-	723	750	5	32	50	180	4x5x1x10x2x6	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    723       
                     ||||X||||XX|||||||||X|X|||||
T:               ----CAATaTGCAggCAGTAGGCAcTgACATT------------------
R:          5   T11020103031313231213203132221130310320320133312112    32        
--
>144_2982_2167_F3	ENSMUST00000113126	-	2598	2625	14	41	50	160	2x3x3x8x2x7x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                              ||X||X||X|||||||X|X||||||X||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGgTG---------
R:         14   T13020103031313231232031110111202112120211102100.30    41        
--
>144_3213_3094_F3	ENSMUST00000113126	-	2594	2614	15	35	50	170	2x14x5	
G:       2614    AATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGAAATCCCTCAAAGAG    2594      
                               ||X|||||||||||||X||||
T:               --------------GGtGTGGTGTCAGGGTgCTGG---------------
R:         15   T10133131123123202111011121200133210310032000013.13    35        
--
>144_3236_389_F3	ENSMUST00000113126	-	2603	2629	11	37	50	170	x4x2x3x3x15	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                           X|||X|X||X||X||||||||||||||
T:               ----------tGTAgAcAGaGGtGTGGTGTGGTGTCA-------------
R:         11   T23302010303113023123203111011110111210322023313.20    37        
--
>145_350_1168_F3	ENSMUST00000113126	-	90	118	9	37	50	170	1x2x3x5x2x1x15	
G:        118    GCTCTGTAGTGTCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATT    90        
                         |X|X||X||||X|XX||||||||||||||
T:               --------GtGtCAtCACTgGtcACGTGTGACTGTCG-------------
R:          9   T2330201002132112112302311311112121123332023223312.    37        
--
>145_814_5051_F3	ENSMUST00000113126	-	2591	2614	18	41	50	180	2x15x4x3	
G:       2614    AACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAA    2591      
                                  ||X||||||||||||||X|||X||
T:               -----------------GGtGTGGTGTCAGGGTGcTGGgTA---------
R:         18   T3201030313112312320311101112120011221011321202122.    41        
--
>146_1218_2356_F3	ENSMUST00000113126	-	2595	2623	16	44	50	176	3C2x4x4x2x13	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                                ||| ||X|||X|||X|X||||||||||||
T:               ---------------CAGCGGtGTGgTGTgGtGTCAGGGTGCTG------
R:         16   T13020103031311231233031113111202112120011321211221    44        
--
>146_1762_2802_F3	ENSMUST00000113126	-	2602	2629	11	38	50	200	4x2x3x3x16	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||||X|X||X||X|||||||||||||||
T:               ----------TGTAgAcAGaGGtGTGGTGTGGTGTCAG------------
R:         11   T13322010303113023123203111011110111212231022331212    38        
--
>146_1861_3141_F3	ENSMUST00000113126	-	2594	2625	14	45	50	180	2x3x3x8x2x6x4x4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                              ||X||X||X|||||||X|X|||||X|||X|||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGgGTGcTGG-----
R:         14   T13020103031313231232031110111202112122011221011102    45        
--
>146_2014_1271_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x9x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X|X||||
T:               --------CtGAGAGCTccAaCCACAGCTtTtGTAA--------------
R:          9   T00133031111222232031110111232103113010330021232121    36        
--
>146_3862_1850_F3	ENSMUST00000113126	-	90	116	11	37	50	170	2x2x2x3x2x16	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATT    90        
                           ||X|X|X||X|X|||||||||||||||
T:               ----------GTcAtCaCTgGtCACGTGTGACTGTCG-------------
R:         11   T23302010303131123123022113111121211233320233300212    37        
--
>147_2178_2793_F3	ENSMUST00000113126	+	2596	2627	14	45	50	166	3x1x1G3x15x2x2x4	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                              |||XX |||X||||||||||||||X|X|X|||
T:               -------------AGCacGCTGaCACCACACCACACCtCtGtCTA-----
R:         14   T00133031111212232033213111011110111103231222302120    45        
--
>147_3408_2318_F3	ENSMUST00000113126	-	2598	2620	21	43	50	190	11x8x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                     |||||||||||X|||||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGTG-------
R:         21   T31033201030313112302320111101112011121230111311133    43        
--
>147_3897_4649_F3	ENSMUST00000113126	-	2602	2621	19	38	50	180	5x15	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                   |||||X||||||||||||||
T:               ------------------GAGGTgTGGTGTGGTGTCAG------------
R:         19   T02230201030313302312201311011110111212230222221111    38        
--
>148_2483_3872_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	13x2x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       |||||||||||||X|X|||||
T:               ----------------------ACACCACACCACAcCtCTGTC-------
R:         23   T23302010300300122211203111011110111201221121121202    43        
--
>149_249_3606_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x11x7x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||||||||||X||||||X||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAgGG---------
R:         16   T02330201030313312312320111101112011121100030100021    41        
--
>149_251_4907_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	10x7x2x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       ||||||||||X||||||X|X|||
T:               ----------------------ACACCACACCaCACCTCtGtCTA-----
R:         23   T23302013303003003123203111011110311102201022320002    45        
--
>149_378_1651_F3	ENSMUST00000113126	+	2601	2631	19	49	50	176	4x2x15x2x2x1G4	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                                   ||||X|X||||||||||||||X|X|X ||||
T:               ------------------CCTGaCaCCACACCACACCTCtGtCtGCACC-
R:         19   T30302010313101001320211131011110111102201223131102    49        
--
>149_1219_436_F3	ENSMUST00000113126	-	2598	2631	8	41	50	166	2x2C3x3x3x8x2x6x4	
G:       2631    AATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                        ||X| |||X||X||X|||||||X|X|||||X|||
T:               -------GGtGCAGAcAGaGGtGTGGTGTgGtGTCAGgGTG---------
R:          8   T10020103031312231232031110111202112121011112020333    41        
--
>149_1462_2995_F3	ENSMUST00000113126	-	2601	2623	16	38	50	170	3x3x10x7	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                |||X||X|||||||||X||||||
T:               ---------------CAGaGGtGTGGTGTGGtGTCAGG------------
R:         16   T00020103031313231232031110111102112120233021300022    38        
--
>149_2618_4250_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111222232031110111232000013001130203220211    36        
--
>149_2695_496_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010303231021120203111011110111201330333323222    36        
--
>149_2792_293_F3	ENSMUST00000113126	-	88	112	15	39	50	170	5x2x10x5x3	
G:        112    GCTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATT    88        
                               |||||X|X|||||||||X||||X||
T:               --------------TCACTgGtCACGTGTGAcTGTCgAA-----------
R:         15   T23302013303131121123002113111120211222023233010133    39        
--
>149_2902_1749_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T03233031111222232031110111232000123001333223222121    36        
--
>150_125_3053_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x13x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||||X||||
T:               ---------------GAcAGaGGTGTGGTGTGGtGTCA------------
R:         16   T02330201030313312312320111101111021121333133302113    38        
--
>150_1379_1484_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111202232031110111232300113010331320002211    36        
--
>150_1468_1990_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T10112323232010300333203111011110111102223010333300    40        
--
>150_1941_2065_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x9x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||||X|||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAAT-------------
R:          9   T00133031111222232031110111232300113030131020313111    37        
--
>150_2971_3075_F3	ENSMUST00000113126	-	723	753	2	32	50	170	2x1x4x5x1x11x2x5	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    723       
                  ||XX|||X||||XX||||||||||X|X||||
T:               -CAgcAATaTGCAggCAGTAGGCACtGaCATT------------------
R:          2   T13112103031311231213203111111130232010100023223022    32        
--
>150_4262_1906_F3	ENSMUST00000113126	+	2595	2621	13	39	50	170	1x4x2x3x12x5	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                             |X|||X|X||X|||||||||||X||||
T:               ------------CaGCAcCcTGaCACCACACCACaCCTC-----------
R:         13   T21120103031310231203213111011110112102231001023101    39        
--
>151_69_4688_F3	ENSMUST00000113126	-	2604	2625	16	37	50	180	5x14x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                |||||X|||||||||||||X||
T:               ---------------GACAGaGGTGTGGTGTGGTgTC-------------
R:         16   T02230201030313302112320111101111012120211033021200    37        
--
>151_223_2627_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x5x2x9x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X||||X|X||||||||X|||||||
T:               -------------TAgACAGaGgTGTGGTGTgGTGTCAG-----------
R:         14   T02030201030313302112123111101112011121233132321112    39        
--
>151_350_2881_F3	ENSMUST00000113126	+	2595	2625	13	43	50	176	4x2x1x2T13x4x4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                             ||||X|XX| |||||||||||||X|||X|||
T:               ------------CAGCaCccTTACACCACACCACAcCTCtGTC-------
R:         13   T23302010303121230123203111011110111302231121023111    43        
--
>151_1347_898_F3	ENSMUST00000113126	-	2605	2622	18	35	50	160	5x13	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                                  |||||X||||||||||||
T:               -----------------AGAGGtGTGGTGTGGTGT---------------
R:         18   T23302010123220303222203111011110111303331232221221    35        
--
>151_1739_2952_F3	ENSMUST00000113126	-	2606	2630	10	34	50	170	2x4x3x4x12	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                          ||X|||X||X|||X|||||||||||
T:               ---------GTgTAGaCAgAGGtGTGGTGTGGTG----------------
R:         10   T10302013031313231112203111011110113202112113020113    34        
--
>151_2568_2344_F3	ENSMUST00000113126	-	2601	2625	14	38	50	170	2x3x3x8x9	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                              ||X||X||X|||||||X||||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGG------------
R:         14   T13012010031210231232031110111201112120310103202212    38        
--
>151_2647_2189_F3	ENSMUST00000113126	+	2715	2744	3	32	50	186	x7x1G12x2x7	
G:       2715    TGTGTTTAGGACATTTTTTAAATCATTGTGTCTAAGCATCTCAGAGTCAA    2744      
                   X||||||X ||||||||||||X|X||||||
T:               --tGTTTAGgGCATTTTTTAAATcAtTGTGTC------------------
R:          3   T02011003230313000003003311011112320310331222202221    32        
--
>151_3576_2955_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x7x2x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X|X||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAA--------------
R:          9   T00133031111222232011110111202300113012120013032221    36        
--
>152_864_2171_F3	ENSMUST00000113126	+	2605	2625	23	43	50	190	13x8	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       |||||||||||||X|||||||
T:               ----------------------ACACCACACCACAcCTCTGTC-------
R:         23   T01033010030313330213203111011110111202221121231212    43        
--
>152_1096_3889_F3	ENSMUST00000113126	-	2596	2620	24	48	50	170	2x4x2x14x3	
G:       2620    AAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAA    2596      
                                        ||X|||X|X|||||||||||||X||
T:               -----------------------AGgTGTgGtGTGGTGTCAGGGTgCT--
R:         24   T10011113113302010303201123111203111011121200123222    48        
--
>152_1253_2652_F3	ENSMUST00000113126	-	2366	2397	9	40	50	180	2x14x3x2x1x1x5x4	
G:       2397    ACTGCTGCCATACTTGCTATGAGGAGATGAGAGAAGACCCGTGCAGGACC    2366      
                         ||X|||||||||||||X||X|XXX||||X|||
T:               --------CAtACTTGCTATGAGGaGAtGagaGAAGaCCC----------
R:          9   T01030313112312013233122012211031220201003330302303    40        
--
>152_1672_2061_F3	ENSMUST00000113126	-	2599	2625	15	41	50	190	5x3x14x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               |||||X||X|||||||||||||X|X||
T:               --------------GACAGaGGtGTGGTGTGGTGTCaGgGT---------
R:         15   T13302013300301121123203111011110111202201310120003    41        
--
>152_2709_4597_F3	ENSMUST00000113126	-	2065	2098	10	43	50	186	8x1x2x13x1x2C2x4	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                          ||||||||XX|X||||||||||||XX| ||X|||
T:               ---------TGAGAGCTccAaCCACAGCTTTTGtaACCTgCCT-------
R:         10   T00100331111222232031110111232000132010223023212001    43        
--
>153_95_3312_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T23302010320301001313203111011110111102210033212222    39        
--
>153_350_638_F3	ENSMUST00000113126	-	2606	2627	13	34	50	160	2x5x3x12	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                             ||X||||X||X|||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTG----------------
R:         13   T23302010303233321123203111011110113202233131202233    34        
--
>153_497_3019_F3	ENSMUST00000113126	+	2863	2881	28	46	50	170	15x4	
G:       2863    CCTTTTCTAATGTCTTCCATTCCTATCTCCCCCCAAAAGAAATATTATTT    2881      
                                            |||||||||||||||X|||
T:               ---------------------------TCCCCCCAAAAGAAAtATT----
R:         28   T00133031111202232031110111202000001000220013301031    46        
--
>153_1046_2717_F3	ENSMUST00000113126	-	2632	2659	20	47	50	166	3x2x5T3x2x12	
G:       2659    AAACCAGATCAAATGCAAAGACCATGGTGAGGTCTGCAGAGGCATCTAAC    2632      
                                    |||X|X|||| |||X|X|||||||||||
T:               -------------------GACcAtGGTGTGGTcTgCAGAGGCATCT---
R:         20   T12100333031020000033213111011110112331222031322223    47        
--
>153_1783_2118_F3	ENSMUST00000113126	-	2601	2624	16	39	50	180	2x5x12x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                ||X||||X|||||||||||X||||
T:               ---------------ACaGAGGtGTGGTGTGGTGtCAGG-----------
R:         16   T01022013313311131222203111011110112212030201220031    39        
--
>153_3442_1908_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x9x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X|X||||
T:               --------CtGAGAGCTccAaCCACAGCTtTtGTAA--------------
R:          9   T00133031111222232031110111232303113010220301302223    36        
--
>154_228_3192_F3	ENSMUST00000113126	-	2604	2625	16	37	50	180	2x3x17	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                ||X||X||||||||||||||||
T:               ---------------GAcAGaGGTGTGGTGTGGTGTC-------------
R:         16   T32030201032013302012020111101111011120023032303131    37        
--
>154_511_1058_F3	ENSMUST00000113126	-	2592	2614	16	38	50	170	2x13x3x5	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAGA    2592      
                                ||X||||||||||||X||X||||
T:               ---------------GGtGTGGTGTCAGGGtGCtGGGT------------
R:         16   T01030303112312320311101112120001301001201121130223    38        
--
>154_565_1015_F3	ENSMUST00000113126	-	2590	2612	24	46	50	170	11x2x4x6	
G:       2612    TCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCCCT    2590      
                                        |||||||||||X|X|||X|||||
T:               -----------------------TGTGGTGTCAGgGtGCTgGGTAC----
R:         24   T23303111100313112312320311101112121021323001313010    46        
--
>154_704_4374_F3	ENSMUST00000113126	-	2593	2621	19	47	50	210	1x3x16x3x6	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                   |X||X|||||||||||||||X||X|||||
T:               ------------------GaGGtGTGGTGTGGTGTCAGgGTgCTGGG---
R:         19   T01002013000013330203203111011110111212301332100013    47        
--
>154_1532_1356_F3	ENSMUST00000113126	-	2597	2617	22	42	50	170	8x8x5	
G:       2617    AATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                      ||||||||X|||||||X||||
T:               ---------------------TGTGGTGTgGTGTCAGgGTGC--------
R:         22   T10320103031311231231031110111201112122011333300033    42        
--
>154_1947_4025_F3	ENSMUST00000113126	-	2605	2634	6	35	50	160	1x4x2x2x2x3x3x13	
G:       2634    AAATTTCTGGTGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                      |X|||X|X|X|X||X||X||||||||||||
T:               -----TcTGGtGtAgAcAGaGGtGTGGTGTGGTGT---------------
R:          6   T23302012103133020123203111011110111000023332311203    35        
--
>154_2621_2716_F3	ENSMUST00000113126	-	89	116	11	38	50	180	2x2x2x3x5x14	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATT    89        
                           ||X|X|X||X||||X|||||||||||||
T:               ----------GTcAtCaCTgGTCAcGTGTGACTGTCGA------------
R:         11   T23302010303131123123012103111121211232222013233112    38        
--
>154_3376_3226_F3	ENSMUST00000113126	-	2645	2671	22	48	50	176	17x1C1x1x6	
G:       2671    CGCAAAGAGAGACAAAACCAGTGCCACAGGCGGGACCATGGTGAGGTCGA    2645      
                                      |||||||||||||||||X |XX|||||
T:               ---------------------TGCCACAGGCGGGACCAtCGtgAGGTC--
R:         22   T30221030013112312300311301112033002101123322201202    48        
--
>155_1145_2251_F3	ENSMUST00000113126	-	2598	2620	19	41	50	190	3x8x12	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                                   |||X|||||||X|||||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGTG---------
R:         19   T31020103031310231232031110111201112120011122300202    41        
--
>155_3079_4973_F3	ENSMUST00000113126	-	2063	2099	9	45	50	190	1x8x1x2x13x3x2x2x1x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTATCTT    2063      
                         |X|||||||XX|X||||||||||||X||X|X|XX|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAAtCtGccTGT-----
R:          9   T00133031111222232031110111232000133002310221111113    45        
--
>156_158_2752_F3	ENSMUST00000113126	-	2604	2623	18	37	50	180	3x17	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                  |||X||||||||||||||||
T:               -----------------CAGaGGTGTGGTGTGGTGTC-------------
R:         18   T02030201030313302312320111101111011120223322210022    37        
--
>156_802_910_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T23302010300302300323313111011110111202221331330221    41        
--
>156_1643_3921_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T20232010300303001123203111011110111302221330333323    41        
--
>156_3276_4654_F3	ENSMUST00000113126	-	2068	2099	9	40	50	186	1x8x1x2x7x9C3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X|||||||XX|X||||||X|||||||| |||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAACCTG----------
R:          9   T00133031111222232031110111222000113010210131231223    40        
--
>156_4212_3723_F3	ENSMUST00000113126	-	2594	2618	12	36	50	170	2x1x3x16x3	
G:       2618    CAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGAAATCCCTCAAAGA    2594      
                            ||XX||X|||||||||||||||X||
T:               -----------GTgtGGtGTGGTGTCAGGGTGCtGG--------------
R:         12   T01030301112312310311101112120011331021231102132220    36        
--
>157_448_2934_F3	ENSMUST00000113126	-	2600	2629	11	40	50	180	2x2x5x2x3x12x4	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                           ||X|X||||X|X||X|||||||||||X|||
T:               ----------TGtAgACAGaGgTGtGGTGTGGTGTCaGGG----------
R:         11   T23102013303103021123211101011110111202000213112...    40        
--
>157_675_873_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x5x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X||||X||||
T:               --------------------AGGTGTGGTGTgGTGTcAGGG---------
R:         21   T31330201030313312311320111101112011111200223121...    41        
--
>157_1238_890_F3	ENSMUST00000113126	-	2074	2099	9	34	50	160	1x3x5x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X||X||||XX|X|||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111232232031110111232000112110030233312...    34        
--
>158_375_2842_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	3x2x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||X|X||X|||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTC--------------
R:         15   T23312010000203021323203111011110111202331303121223    36        
--
>158_459_2228_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23102013303301021123203111011110111202233333212010    36        
--
>158_2332_3680_F3	ENSMUST00000113126	+	2596	2624	14	42	50	176	4x2x2T12x4x4	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                              ||||X|X| ||||||||||||X|||X|||
T:               -------------AGCAcCcTTACACCACACCACaCCTcTGT--------
R:         14   T12323102032303231203203111011110112102321110231120    42        
--
>159_1534_3883_F3	ENSMUST00000113126	-	2595	2625	16	46	50	176	2x3x3x8x8x2G4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                ||X||X||X|||||||X|||||||X| ||||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGGGCTG----
R:         16   T02030201030313012312320311101112011121210003212212    46        
--
>160_369_2651_F3	ENSMUST00000113126	-	2598	2623	18	43	50	180	3x11x6x1x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                  |||X||||||||||X|||||XX||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCagGGTG-------
R:         18   T0233020103031311231232011110111201112330011101330.    43        
--
>160_989_3062_F3	ENSMUST00000113126	-	2586	2615	19	48	50	180	1x2x8x11x2x1x5	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTACCTTGCA    2586      
                                   |X|X|||||||X||||||||||X|XX||||
T:               ------------------TgGtGTGGTGTcAGGGTGCTGGgTacCTTG--
R:         19   T2312010303131123123003111011111200113210312302010.    48        
--
>160_1147_4348_F3	ENSMUST00000113126	-	2598	2625	14	41	50	186	2x3C2x8x12	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                              ||X|| ||X|||||||X|||||||||||
T:               -------------GAcAGCGGtGTGGTGTgGTGTCAGGGTG---------
R:         14   T1302010303131323123302111011120111212001102331210.    41        
--
>160_3911_4126_F3	ENSMUST00000113126	+	535	559	11	35	50	170	1x5x3x13x3	
G:        535    TACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAA    559       
                           |X||||X||X||||||||||||X||
T:               ----------TtGATGgCAaGGGTCATGTGGGtAC---------------
R:         11   T2022133001211231231320012131110033122022023101210.    35        
--
>161_438_2915_F3	ENSMUST00000113126	-	2596	2623	16	43	50	180	3x3x10x2x6x4	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                |||X||X|||||||||X|X|||||X|||
T:               ---------------CAGaGGtGTGGTGTGGtGtCAGGGtGCT-------
R:         16   T23302013031311231232031110111100102120031322011002    43        
--
>161_752_2966_F3	ENSMUST00000113126	-	2604	2623	16	35	50	180	3x17	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAATC    2604      
                                |||X||||||||||||||||
T:               ---------------CAGaGGTGTGGTGTGGTGTC---------------
R:         16   T13030103031310231232011110111101112322030322302033    35        
--
>161_1159_520_F3	ENSMUST00000113126	-	2591	2615	18	42	50	190	3x12x2x8	
G:       2615    AAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAA    2591      
                                  |||X|||||||||||X|X|||||||
T:               -----------------TGGtGTGGTGTCAGGgTgCTGGGTA--------
R:         18   T20201031013112312310311101112120313321001330323132    42        
--
>161_1495_3279_F3	ENSMUST00000113126	-	1396	1415	22	41	50	160	2x11x7	
G:       1415    CTTCCAGAAGGAGAAGAAATCCGTGAGCTTAAACACCGCGTCTCTAGTCT    1396      
                                      ||X||||||||||X||||||
T:               ---------------------CGtGAGCTTAAACaCCGCGT---------
R:         22   T20221333013112312012103012232030012103331201020232    41        
--
>161_3438_3943_F3	ENSMUST00000113126	-	2598	2622	21	45	50	210	10x9x6	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGAAAAA    2598      
                                     ||||||||||X||||||||X|||||
T:               --------------------AGAGGTGTGGtGTGGTGTCaGGGTG-----
R:         21   T31223103033020302033322201111031110111222001122330    45        
--
>162_330_2573_F3	ENSMUST00000113126	-	2069	2095	13	39	50	190	5x1x2x12x7	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                             |||||XX|X|||||||||||X||||||
T:               ------------GAGCTccAaCCACAGCTTTTgTAATCT-----------
R:         13   T00133031111212232031110111232000313032230302302222    39        
--
>162_559_3093_F3	ENSMUST00000113126	-	2594	2623	18	47	50	180	3x11x6x1x1x5x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                  |||X||||||||||X|||||XXX||||X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCaggGTGCtGG---
R:         18   T02330201030313112312320111101112011122320113310110    47        
--
>162_1163_4010_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	6x2x6x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  ||||||X|X|||||X|||||||||
T:               -----------------CAGAGGtGtGGTGTgGTGTCAGGG---------
R:         18   T02330201030313112312220310101112011121200331331010    41        
--
>163_2319_3967_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x13x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTcAGG-----------
R:         17   T20030201032000320123203111011110111012033013320122    39        
--
>164_315_2858_F3	ENSMUST00000113126	-	2599	2621	28	50	50	170	4x10x2x7	
G:       2621    GAAAGAAAGAAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGT    2599      
                                            ||||X|||||||||X|X||||||
T:               ---------------------------GAGGtGTGGTGTGGtGtCAGGGT
R:         28   T10031101033302010303133113112203111011110212212001    50        
--
>164_506_3311_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T03302013323101113323201111011110111200302332232102    36        
--
>164_1014_2357_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T01023013331213023213203111011110111102200133031303    39        
--
>164_1157_4416_F3	ENSMUST00000113126	+	2605	2625	23	43	50	190	15x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       |||||||||||||||X|||||
T:               ----------------------ACACCACACCACACCtCTGTC-------
R:         23   T23302010300300301313203111011110111103221123131300    43        
--
>164_1547_680_F3	ENSMUST00000113126	-	2599	2625	14	40	50	170	2x3x3x11x5x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                              ||X||X||X||||||||||X||||X||
T:               -------------GAcAGaGGtGTGGTGTGGTgTCAGgGT----------
R:         14   T11220103031313231232031110111101312122010103331200    40        
--
>165_291_1423_F3	ENSMUST00000113126	-	2604	2629	12	37	50	150	2x2x2x6x10x4	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                            ||X|X|X|||||X|||||||||X|||
T:               -----------TGtAgAcAGAGGtGTGGTGTGGtGTC-------------
R:         12   T31230201030313312312220.11101111001120330023323330    37        
--
>165_747_3356_F3	ENSMUST00000113126	-	2599	2624	16	41	50	156	4x3C13x2x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                ||||X|| |||||||||||||X|X||
T:               ---------------ACAGaGGCGTGGTGTGGTGTCaGgGT---------
R:         16   T23302013300003011123203.11011110111202301033212132    41        
--
>165_1045_2258_F3	ENSMUST00000113126	+	2594	2627	12	45	50	168	7G2T1x12x4x2G3	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                            ||||||| || |X|||||||||||X|||X| |||
T:               -----------CCAGCACGCTTAcACCACACCACAcCTCtGGCTA-----
R:         12   T23102010300201231133203.11011110111202201032303122    45        
--
>165_1608_2995_F3	ENSMUST00000113126	-	2601	2627	18	44	50	160	2x1x2x4x15x3	
G:       2627    GAAAGAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAA    2601      
                                  ||XX|X|||X||||||||||||||X||
T:               -----------------TAgaCaGAGgTGTGGTGTGGTGTCaGG------
R:         18   T02030300021310201030313.22311110111101112020323230    44        
--
>165_2698_2124_F3	ENSMUST00000113126	-	289	305	27	43	50	170	17	
G:        305    GCCACAGCCGATATCTTATACGACCTTGTGTTTGAGCGTCTTCTAAATCA    289       
                                           |||||||||||||||||
T:               --------------------------TGTGTTTGAGCGTCTTC-------
R:         27   T22130201030200010313203.11011110012233122023322233    43        
--
>165_2877_2828_F3	ENSMUST00000113126	+	281	299	30	48	50	170	11x8	
G:        281    TCTGTTGATATTACATCGAGCTGGGACTTTGGTATTAGAAGACGCTCAAA    299       
                                              |||||||||||X|||||||
T:               -----------------------------TGGTATTAGAAgACGCTCA--
R:         30   T02130201030313112303223.03011310133032200213322122    48        
--
>165_3212_4562_F3	ENSMUST00000113126	-	2594	2616	26	48	50	170	2x2x13x6	
G:       2616    AGAAATTCTAAACAATCAGCCCAGGGTGGTGTGGTGTCAGGGTGCTGGAA    2594      
                                          ||X|X||||||||||||X|||||
T:               -------------------------GTgGtGTGGTGTCAGGGtGCTGG--
R:         26   T23000311330201030313012.10100311101112120031321020    48        
--
>166_184_3444_F3	ENSMUST00000113126	-	2594	2620	19	45	50	170	3x14x3x2x2x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                                   |||X|||||||||||||X||X|X|X||
T:               ------------------AGGtGTGGTGTGGTGTCaGGgTgCtGG-----
R:         19   T13020103031310231232031110111101112320310311020020    45        
--
>166_533_959_F3	ENSMUST00000113126	-	720	750	5	35	50	190	4x5x1x11x2x3x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                     ||||X||||XX||||||||||X|X||X||||
T:               ----CAATaTGCAggCAGTAGGCACtGaCAtTGTC---------------
R:          5   T23120103031311231213203111131110112201001321022322    35        
--
>166_693_2319_F3	ENSMUST00000113126	-	2592	2627	14	49	50	180	2x2x3x3x8x2x6x5x2x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                              ||X|X||X||X|||||||X|X|||||X||||X|X||
T:               -------------TAgAcAGaGGtGTGGTGTgGtGTCAGgGTGCtGgGT-
R:         14   T02030201030313312312320011101112001121230113012011    49        
--
>166_1408_315_F3	ENSMUST00000113126	-	2598	2625	16	43	50	200	2x3x11x8x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                ||X||X||||||||||X|||||||X|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAGgGTG-------
R:         16   T31330201030333112312320111101112011121210112013210    43        
--
>166_1917_3471_F3	ENSMUST00000113126	-	719	753	2	36	50	210	1x2x4x5x1x11x2x9	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X||||XX||||||||||X|X||||||||
T:               -CaGcAATaTGCAggCAGTAGGCACtGaCATTGTCA--------------
R:          2   T13020103031313231213203113111130112103223001001221    36        
--
>166_3490_4014_F3	ENSMUST00000113126	-	162	198	14	50	50	176	x4x5x2x3x2x4T3x2x11	
G:        198    TTCTGATCTGTTCCACTGTCTCCAGGCACTGACGGAGGATGAGTCTTCTC    162       
                              X|||X||||X|X||X|X||| |||X|X||||||||||
T:               -------------cACTgTCTCcAgGCaCtGACTGAGgAtGAGTCTTCTC
R:         14   T02330201030313112312222130331112121223221221220222    50        
--
>166_4091_506_F3	ENSMUST00000113126	-	2592	2615	24	47	50	160	1x2x14x3x4	
G:       2615    AATTCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATC    2592      
                                        |X|X|||||||||||||X||X|||
T:               -----------------------TgGtGTGGTGTCAGGGTgCTgGGT---
R:         24   T01233332201000310112313320311101112120013322001003    47        
--
>168_214_2337_F3	ENSMUST00000113126	-	2595	2622	21	48	50	186	2x4x13x3A5	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGAA    2595      
                                     ||X|||X||||||||||||X|| |||||
T:               --------------------AGaGGTgTGGTGTGGTGTCaGGATGCTG--
R:         21   T3101020023202030003302320101101111011123202313212.    48        
--
>168_578_718_F3	ENSMUST00000113126	+	2602	2626	24	48	50	170	3x3x2x13x4	
G:       2602    GAAAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTAC    2626      
                                        |||X||X|X||||||||||||X|||
T:               -----------------------CTGaCAcCaCACCACACCTCTgTCT--
R:         24   T1203132000330201030310112111120311101111022231220.    48        
--
>168_1048_1815_F3	ENSMUST00000113126	-	719	753	2	36	50	196	1x2x4x6x10x1G3x7	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X|||||X|||||||||X |||X||||||
T:               -CaGcAATaTGCAGgCAGTAGGCAcGGACaTTGTCA--------------
R:          2   T1302010303131223121320313302123011210223102230113.    36        
--
>168_1648_3127_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	12x5x1x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       ||||||||||||X||||XX||||
T:               ----------------------ACACCACACCACaCCTCtgTCTA-----
R:         23   T0203020103200031033320311101111011310223312230103.    45        
--
>168_1908_4435_F3	ENSMUST00000113126	+	2847	2868	28	49	50	180	9x7x6	
G:       2847    CAGCCAACAGGAGCACCCTTTTCTAATGTCTTCCATTCCTATCTCCCCCC    2868      
                                            |||||||||X||||||X|||||
T:               ---------------------------GTCTTCCATtCCTATCtCCCCC-
R:         28   T1302010303131123120021310100122020131202332320000.    49        
--
>168_2287_768_F3	ENSMUST00000113126	+	2596	2622	14	40	50	156	3x1x1x3T13x5	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                              |||XXX|| |||||||||||||X||||
T:               -------------AGCaccCTTACACCACACCACAcCTCT----------
R:         14   T1333220100030323233020311101111011120222233202300.    40        
--
>168_2907_1760_F3	ENSMUST00000113126	-	2593	2615	16	38	50	170	1x2x16x4	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAG    2593      
                                |X|X|||||||||||||||X|||
T:               ---------------TgGtGTGGTGTCAGGGTGCtGGG------------
R:         16   T2213303121123123203111011121200113310033023321122.    38        
--
>169_1938_339_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x3x5x1x2x12x4x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X|||||||||||X|||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAtCT-----------
R:          9   T0013303111123223203111011123200031301222000203212.    39        
--
>169_4184_3166_F3	ENSMUST00000113126	+	941	965	20	44	50	170	2x1x5x12x5	
G:        941    TCCAAGTAGACAACACAAAGGTCACCATGAAGGAGATCTTGCTCAAGGCA    965       
                                    ||XX||||X|||||||||||X||||
T:               -------------------GGtcACCAtGAAGGAGATCTtGCTC------
R:         20   T1212010303131323123103111011120202223223132221222.    44        
--
>169_4218_3019_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x3x5x1x2x12x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X|||||||||||X|X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTaATCT-----------
R:          9   T0013303111120223203111011123200021003223032201013.    39        
--
>170_106_4088_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x3x15	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||X||||||||||||||
T:               -----------------CAGaGGtGTGGTGTGGTGTCA------------
R:         18   T31130201030313312312320211101111011121120312120230    38        
--
>170_1163_704_F3	ENSMUST00000113126	-	2078	2106	17	45	50	190	3x2x11x1x2x10	
G:       2106    AATGCTGCTCATGGATATTGCTTCTGAGAGCTCCAACCACAGCTTGTCAC    2078      
                                 |||X|X||||||||||XX|X|||||||||
T:               ----------------ATTgCtTCTGAGAGCTccAaCCACAGCTT-----
R:         17   T13223201021303020303330221222232031110111232020202    45        
--
>170_1417_2975_F3	ENSMUST00000113126	-	1104	1129	16	41	50	186	1x5x2A17	
G:       1129    TAGCCATGCCAGACACCGTCTGCCCTTGAACTGTTCTCGCGTAAAGCAAA    1104      
                                |X||||X| |||||||||||||||||
T:               ---------------CcGTCTgCACTTGAACTGTTCTCGCG---------
R:         16   T02330201030313012312203112012012110222333322322220    41        
--
>170_1718_3549_F3	ENSMUST00000113126	-	720	753	2	35	50	186	1x2x4x5A4x6x2x9	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                  |X|X|||X|||| ||||X|||||X|X||||||||
T:               -CaGcAATaTGCAAGCAGtAGGCAcTgACATTGTC---------------
R:          2   T13020103031310231223203132221130112302133301023103    35        
--
>170_2157_2352_F3	ENSMUST00000113126	+	2594	2622	12	40	50	176	3x3x2x2T2x16	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||X||X|X| ||X|||||||||||||||
T:               -----------CCAgCAcCcTTACaCCACACCACACCTCT----------
R:         12   T13302010300301031203203121011110111102223033312022    40        
--
>170_2462_866_F3	ENSMUST00000113126	-	2596	2620	20	44	50	170	3x12x2x2x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||X|||||||||||X|X|X|||||
T:               -------------------AGGtGTGGTGTGGTGtCaGgGTGCT------
R:         20   T13302010300003320213203111011110113202301132322301    44        
--
>170_3178_2509_F3	ENSMUST00000113126	+	2595	2620	13	38	50	186	7x2T12x4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                             |||||||X| ||||||||||||X|||
T:               ------------CAGCACCcTTACACCACACCACaCCT------------
R:         13   T23302010302311231103203111011110113102010133213100    38        
--
>170_3703_778_F3	ENSMUST00000113126	+	1838	1856	25	43	50	170	12x7	
G:       1838    TGGAGGGGCTGAGTGCTGCTCAGCCGTGTGTCCTGCCTGGCAGTCCCAGC    1856      
                                         ||||||||||||X||||||
T:               ------------------------CGTGTGTCCTGCcTGGCAG-------
R:         25   T13330201030313112312320313111112021322103123333112    43        
--
>171_3563_4511_F3	ENSMUST00000113126	+	2589	2622	7	40	50	172	2x1x4G4x1x2T13x5	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                       ||XX||| ||||XX| |||||||||||||X||||
T:               ------GGtaCCCGGCACccTTACACCACACCACAcCTCT----------
R:          7   T23302010321003031113203111011110111202223323023003    40        
--
>172_781_4861_F3	ENSMUST00000113126	-	2596	2626	14	44	50	170	1x2x6x11x3x2x3x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                              |X|X|||||X||||||||||X||X|X||X||
T:               -------------AgAcAGAGGtGTGGTGTGGTgTCaGgGTgCT------
R:         14   T23302010303301123122202111011110131202301332332222    44        
--
>172_1081_3065_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113003131212301031    36        
--
>172_1775_4521_F3	ENSMUST00000113126	-	1419	1442	27	50	50	160	3x1x6x2x12	
G:       1442    CAAAGAAAACTGAACAGGCGAACAAGGTGCTTGTAGTCATGGCTGCTTAG    1419      
                                           |||XX|||||X|X|||||||||||
T:               --------------------------GTGctTGTAGtCaTGGCTGCTTAG
R:         27   T13231030013132312113203113311030113202331032132032    50        
--
>172_1953_902_F3	ENSMUST00000113126	-	2590	2622	18	50	50	170	2x3x13x1x2x3x3x3x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                                  ||X||X||||||||||||XX|X||X||X||X||
T:               -----------------AGaGGtGTGGTGTGGTGTcaGgGTgCTgGGtAC
R:         18   T31230201030313112323203111011110111102301232300031    50        
--
>173_1237_3290_F3	ENSMUST00000113126	+	2594	2620	12	38	50	176	5x2x1x2T16	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                            |||||X|XX| ||||||||||||||||
T:               -----------CCAGCaCccTTACACCACACCACACCT------------
R:         12   T23102013300101233123203111011110111102303132231122    38        
--
>173_2308_2270_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x9x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||X|||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAAT-------------
R:          9   T00133031111232232031110111232300113030320303232220    37        
--
>174_235_1027_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23122010303101021123203111011110111202223032332120    36        
--
>174_424_1257_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T31330201030313312312320111101112011121233122011113    39        
--
>174_635_1353_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23300010320001001123203111011110111203220133113020    36        
--
>174_792_4427_F3	ENSMUST00000113126	-	2596	2624	16	44	50	190	4x3x14x3x1x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                ||||X||X|||||||||||||X||XX|||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCaGGgtGCT------
R:         16   T23101010321301011123203111011110111202020132330302    44        
--
>174_1175_557_F3	ENSMUST00000113126	+	2596	2621	14	39	50	180	4x5x12x1x4	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                              ||||X||||X|||||||||||XX|||
T:               -------------AGCAcCCTGaCACCACACCACacCTC-----------
R:         14   T20020100031312231200213111011110112302203023031103    39        
--
>174_1503_3314_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000102010130332112222    33        
--
>174_1793_3810_F3	ENSMUST00000113126	-	2065	2100	13	48	50	166	1x5x4x1x2x9x2x6x2A3	
G:       2100    ATGGATTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAG    2065      
                             |X||||X|||XX|X||||||||X|X|||||X| |||
T:               ------------TcTGAGaGCTccAaCCACAGCTtTtGTAATcTACCT--
R:         13   T31330201030313212212320313101112321021130332310221    48        
--
>174_2387_1636_F3	ENSMUST00000113126	-	83	110	16	43	50	186	3x2x2x13A7	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    83        
                                |||X|X|X|||||||||||| |||||||
T:               ---------------ACTgGtCaCGTGTGACTGTCAAATATGA-------
R:         16   T03120103031310231230222131111212112100333121222320    43        
--
>174_3387_2293_F3	ENSMUST00000113126	+	2960	2992	16	48	50	182	2x4T1x1x7T13x3	
G:       2960    AAATGACTAATTTGGTCATTAAATCTTGTCACATATTCAATATTAAAATA    2992      
                                ||X||| |XX|||||| |||||||||||||X||
T:               ---------------TCaTTATAtcTTGTCATATATTCAATATTAaAA--
R:         16   T01030313112312322330333112011213333302103330310020    48        
--
>175_922_1640_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T23302010300001002113203111011110111102233030122132    39        
--
>175_1038_4259_F3	ENSMUST00000113126	-	2601	2623	14	36	50	170	3x3x8x9	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATCCC    2601      
                              |||X||X|||||||X||||||||
T:               -------------CAGaGGtGTGGTGTgGTGTCAGG--------------
R:         14   T22010303131123123203111011120111212033210032130233    36        
--
>175_1822_2339_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x12x2x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||X|X||||
T:               ----------------CAGaGGtGTGGTGTGGTGtCaGGGT---------
R:         17   T23302010300000000123203111011110113202001033303231    41        
--
>175_3212_4179_F3	ENSMUST00000113126	-	2592	2624	18	50	50	170	2x4x2x3x1x12x2x4x3	
G:       2624    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGT    2592      
                                  ||X|||X|X||XX|||||||||||X|X|||X||
T:               -----------------ACaGAGgTgTGgtGTGGTGTCAGGgTgCTGgGT
R:         18   T20033231330203030313222312111311101112120213321301    50        
--
>175_3509_4144_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000121331030021212302    33        
--
>176_91_1866_F3	ENSMUST00000113126	+	2590	2622	8	40	50	162	1x3x1x5T1x2T12x6	
G:       2590    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                        |X||XX|||| |X| ||||||||||||X|||||
T:               -------GtACccAGCATCcTTACACCACACCACaCCTCT----------
R:          8   T01002013031311231323203111011110112102223013212031    40        
--
>176_771_3391_F3	ENSMUST00000113126	+	2597	2620	15	38	50	166	4x1x2T16	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                               ||||XX| ||||||||||||||||
T:               --------------GCACccTTACACCACACCACACCT------------
R:         15   T23302010300301131123203111011110111102300033221022    38        
--
>176_801_2226_F3	ENSMUST00000113126	+	2593	2622	11	40	50	166	x4x4x1x2T13x5	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           X|||X|||XX| |||||||||||||X||||
T:               ----------cCCAgCACccTTACACCACACCACAcCTCT----------
R:         11   T23102010300001331123203111011110111202223033032233    40        
--
>176_1069_2010_F3	ENSMUST00000113126	+	2602	2623	20	41	50	160	2x1x13x6	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                    ||XX||||||||||||X|||||
T:               -------------------CTgaCACCACACCACAcCTCTG---------
R:         20   T23303013323101032323223111011110111202221233322321    41        
--
>176_1368_2067_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T32301010303011322123203111011110111213020222301322    37        
--
>176_1820_2133_F3	ENSMUST00000113126	-	2602	2623	17	38	50	186	5A16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 ||||| ||||||||||||||||
T:               ----------------CAGAGATGTGGTGTGGTGTCAG------------
R:         17   T13302010120131123122223111011110111212332310030221    38        
--
>176_1847_4616_F3	ENSMUST00000113126	-	2601	2631	9	39	50	170	2x4x2x2x1x3x14x3	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                         ||X|||X|X|XX||X|||||||||||||X||
T:               --------GGtGTAgAcAgaGGtGTGGTGTGGTGTCaGG-----------
R:          9   T23002010303113323113203111011110111202033121122213    39        
--
>176_2149_1457_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23301010300301021123203111011110111203230132232302    36        
--
>176_2195_1526_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23122010301001022123203111011110111213232033101203    37        
--
>176_3425_2166_F3	ENSMUST00000113126	+	2584	2621	2	39	50	172	3x6x2x1C1x1x2G2x1x17	
G:       2584    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                  |||X|||||X|X |XX| ||XX||||||||||||||||
T:               -GGCaAGGTAcCcCGcaCGCTgaCACCACACCACACCTC-----------
R:          2   T10033020130030310133223111011110111102233013212023    39        
--
>176_3489_2345_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23301010303103121123203111011110111203030033331232    36        
--
>177_1220_2601_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x16x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X|||||||||||||||X||
T:               -----------------CAGaGGTGTGGTGTGGTGTcAG-----------
R:         18   T02130201030313312312320111101111011131233231222231    39        
--
>177_1312_362_F3	ENSMUST00000113126	-	2611	2629	24	42	50	170	2x17	
G:       2629    AGTGGAAAGAAAGAAATTCTAAATGTAGACAGAGGTGTGGTGAGTCACTG    2611      
                                        ||X||||||||||||||||
T:               -----------------------TGtAGACAGAGGTGTGGTG--------
R:         24   T02201001231231320201320313322112220111101132322102    42        
--
>177_1338_3199_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23101010303321121123203111011110111202211233233023    36        
--
>177_1777_4074_F3	ENSMUST00000113126	+	2595	2615	13	33	50	170	10x2x9	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                             ||||||||||X|X||||||||
T:               ------------CAGCACCCTGaCaCCACACCA-----------------
R:         13   T12120103031311231100213101011110103203230100010302    33        
--
>177_1884_1847_F3	ENSMUST00000113126	-	2602	2626	13	37	50	190	3x3x3x16	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                             |||X||X||X|||||||||||||||
T:               ------------AGAcAGaGGtGTGGTGTGGTGTCAG-------------
R:         13   T23302010312312231232031110111101112122210033111032    37        
--
>178_1623_2966_F3	ENSMUST00000113126	-	2595	2623	17	45	50	190	3x3x14x2x3x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                 |||X||X|||||||||||||X|X||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGgGTgCTG-----
R:         17   T23302010301001000123203111011110111202201032121020    45        
--
>178_1856_1232_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	2x3x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X|||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T23302010323133323123203111011110111212231023222032    38        
--
>178_2139_3274_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	1x5x3x12x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X||||X||X|||||||||||X|||
T:               -------------AgACAGaGGtGTGGTGTGGTGtCAG------------
R:         14   T23102013300101121123203111011110113212330133011333    38        
--
>178_3530_1279_F3	ENSMUST00000113126	-	2596	2626	14	44	50	170	1x5x3x2x12x2x3x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                              |X||||X||X|X|||||||||||X|X||X||
T:               -------------AgACAGaGGtGtGGTGTGGTGTCaGgGTgCT------
R:         14   T23102010303101121123203121011110111202301332221332    44        
--
>179_160_191_F3	ENSMUST00000113126	-	1424	1460	9	45	50	182	1x4C6x1x9x7A2x2x3	
G:       1460    CAAAGAAAGTCGGACTCGAAGTACAGGTGCTTGTAGTCATGGCTGAAGAA    1424      
                         |X||| ||||||XX||||||||X|||||| ||X|X||
T:               --------GtCGGCCTCGAAgtACAGGTGCtTGTAGTAATgGcTG-----
R:          9   T32310311102303022320323112011300113213033022103110    45        
--
>179_293_1413_F3	ENSMUST00000113126	+	2597	2622	15	40	50	166	4x1x2T13x5	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                               ||||XX| |||||||||||||X||||
T:               --------------GCACccTTACACCACACCACAcCTCT----------
R:         15   T23301010300101031123203111011110111202222032003300    40        
--
>179_661_2120_F3	ENSMUST00000113126	+	2602	2626	20	44	50	176	16x3x2T3	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                    ||||||||||||||||X||X| |||
T:               -------------------CTGACACCACACCACAcCTcTTTCT------
R:         20   T20102010300301032323212111011110111202320022021232    44        
--
>179_708_2199_F3	ENSMUST00000113126	-	2597	2625	16	44	50	170	2x3x3x8x8x2x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                ||X||X||X|||||||X|||||||X|X||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGtGC------
R:         16   T02330201030313312312320311101112011121220313311220    44        
--
>179_987_981_F3	ENSMUST00000113126	-	2600	2623	16	39	50	180	3x3x15x3	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                |||X||X||||||||||||||X||
T:               ---------------CAGaGGtGTGGTGTGGTGTCAgGG-----------
R:         16   T13020103031311231232021110111101112100002021311220    39        
--
>179_1172_2222_F3	ENSMUST00000113126	+	2591	2620	9	38	50	186	1x5x4x1x2T16	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                         |X||||X|||XX| ||||||||||||||||
T:               --------TaCCCAgCACccTTACACCACACCACACCT------------
R:          9   T23102010301001331123203111011110111102302032301110    38        
--
>179_2688_3369_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23100010320331021123203111011110111202220323221220    36        
--
>179_3644_357_F3	ENSMUST00000113126	-	2596	2625	16	45	50	186	2x3x11x5x5A3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                ||X||X||||||||||X||||X|||| |||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTcAGGGAGCT-----
R:         16   T31330201030313312312320111101112011101200223202322    45        
--
>180_488_2597_F3	ENSMUST00000113126	+	2594	2621	12	39	50	180	3x1x3x3x14x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            |||XX||X||X|||||||||||||X|||
T:               -----------CCAgcACcCTgACACCACACCACAcCTC-----------
R:         12   T23102010303101111120202111011110111202202032232222    39        
--
>180_864_941_F3	ENSMUST00000113126	-	70	87	31	48	50	160	9x9	
G:         87    TTGAATTTTTAGCAATTTTATATTTAGATATATGAGCTAGAATGATAGAC    70        
                                               |||||||||X||||||||
T:               ------------------------------TATGAGCTAgAATGATAG--
R:         31   T23102010303131123323333123211123312232332031233233    48        
--
>180_1420_2689_F3	ENSMUST00000113126	+	2589	2629	7	47	50	182	2x3x2x4x2x2T12x5x1T3x3	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                       ||X||X|X|||X|X| ||||||||||||X||||X |||X||
T:               ------GGtACcCaGCAcCcTTACACCACACCACaCCTCtTTCTaCA---
R:          7   T23100100031300231303203111011110112102230022011222    47        
--
>180_1478_4706_F3	ENSMUST00000113126	+	2593	2620	11	38	50	166	1x2x5x1x2T16	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                           |X|X||||XX| ||||||||||||||||
T:               ----------CcCaGCACccTTACACCACACCACACCT------------
R:         11   T23302010300303231123203111011110111102323133222231    38        
--
>180_1617_1355_F3	ENSMUST00000113126	+	2601	2627	19	45	50	176	1x2T12x6x5	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                   |X| ||||||||||||X|||||X||||
T:               ------------------CcTTACACCACACCACaCCTCTgTCTA-----
R:         19   T23302010301001300123203111011110112102223122323313    45        
--
>180_2803_2392_F3	ENSMUST00000113126	-	2594	2619	21	46	50	180	2x17x2x1x4	
G:       2619    AAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                     ||X||||||||||||||||X|XX|||
T:               --------------------GGtGTGGTGTGGTGTCAGGgTgcTGG----
R:         21   T00230201030303312012303111011110111212031222103102    46        
--
>180_2812_1916_F3	ENSMUST00000113126	-	2300	2334	9	43	50	162	4x1G1x12x4x2G2x4x3	
G:       2334    CTGTTGGCTGTCACACTATATTACCAGCACCTGTCTCTCAGATGACAATG    2300      
                         ||||X |X|||||||||||X|||X| ||X|||X||
T:               --------TGTCaGAcTATATTACCAGcACCtGGCTcTCAgAT-------
R:          9   T00133033111222202333303101211100103232210233301102    43        
--
>180_3561_2751_F3	ENSMUST00000113126	+	2593	2627	11	45	50	162	x5x3x1x2T12x4T1x5	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                           X||||X||XX| ||||||||||||X||| |X||||
T:               ----------cCCAGcACccTTACACCACACCACaCCTTTgTCTA-----
R:         11   T23302010303001201123203111011110113102000122321231    45        
--
>180_3563_1927_F3	ENSMUST00000113126	+	1219	1238	24	43	50	160	1x5x14	
G:       1219    CAAGTCATTCAAAGTCAGCATGATCCACAGACTGCGATTCACGACGGATG    1238      
                                        |X||||X|||||||||||||
T:               -----------------------TcCACAgACTGCGATTCACG-------
R:         24   T32302010303031033123323110111121213323021130121213    43        
--
>180_3837_3074_F3	ENSMUST00000113126	-	1809	1835	16	42	50	170	x3x8x4x2x10	
G:       1835    ACAGGATATGCTTAGTGAGCAGCACTCAGCCCCTCCAGGAGGCAGCATGA    1809      
                                X||X|||||||X|||X|X|||||||||
T:               ---------------tGAgCAGCACTcAGCcCcTCCAGGAGG--------
R:         16   T10020102031313231213123112012330122012022032320101    42        
--
>180_3862_961_F3	ENSMUST00000113126	-	2602	2630	10	38	50	170	2x4x2x2x3x12x4	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                          ||X|||X|X|X||X|||||||||||X|||
T:               ---------GTgTAGaCaGaGGtGTGGTGTGGTGtCAG------------
R:         10   T23302013031313231223203111011110112212230102301102    38        
--
>180_3868_4882_F3	ENSMUST00000113126	-	1105	1128	17	40	50	160	5x2x1x4x12	
G:       1128    TAGCCATGCCAGACATCGTCTGCCCTTGAACTGTTCTCGCTTAAAGCAAA    1105      
                                 |||||X|XX|||X|||||||||||
T:               ----------------CGTCTgCccTTGaACTGTTCTCGC----------
R:         17   T02233201030313102312203132013012110222332130301202    40        
--
>181_675_2955_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	5x3x12x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||X|||||||||||X|X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         15   T231010133003013211232031110111101122020000330133.2    40        
--
>181_692_956_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T233010103000011211232031110111101112023120232203.3    36        
--
>181_877_1311_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T233010103003011211232031110111101112023233330013.1    36        
--
>181_1020_827_F3	ENSMUST00000113126	+	2593	2622	11	40	50	166	1x3x4x1x2T13x5	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           |X||X|||XX| |||||||||||||X||||
T:               ----------CcCAgCACccTTACACCACACCACAcCTCT----------
R:         11   T233010103031011311232031110111101112022203330230.2    40        
--
>181_1186_2962_F3	ENSMUST00000113126	-	2602	2623	16	37	50	180	3x7x12	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||||||X|||||||||||
T:               ---------------CAGaGGTGTGgTGTGGTGTCAG-------------
R:         16   T130201030313112312320111131111011121223311333222.1    37        
--
>181_1283_2371_F3	ENSMUST00000113126	-	2601	2623	17	39	50	176	5A6x11	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 ||||| ||||||X||||||||||
T:               ----------------CAGAGATGTGGTgTGGTGTCAGG-----------
R:         17   T233010101230010231222231110121101112120200022202.0    39        
--
>181_1294_3695_F3	ENSMUST00000113126	+	2593	2617	11	35	50	176	4x4G3x13	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2617      
                           ||||X||| |||X||||||||||||
T:               ----------CCCAgCACGCTGaCACCACACCACA---------------
R:         11   T233020103000013311332131110111101112030002333301.3    35        
--
>181_1713_2141_F3	ENSMUST00000113126	-	2592	2623	16	47	50	200	3x3x8x9x2x3x4	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2592      
                                |||X||X|||||||X||||||||X|X||X|||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGGgTgCTgGGT---
R:         16   T233020103031212312320311101112011121203103230012.2    47        
--
>181_1725_1799_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	5x3x12x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||X|X||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGG-----------
R:         15   T233020103003011211232031110111101102020223332222.3    39        
--
>181_1752_2201_F3	ENSMUST00000113126	-	2606	2625	15	34	50	160	5x3x12	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||X|||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTG----------------
R:         15   T233020103032013211232031110111101122023303332313.2    34        
--
>181_1849_1270_F3	ENSMUST00000113126	+	2592	2624	10	42	50	176	1x4x4x1x2T13x3x4	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                          |X|||X|||XX| |||||||||||||X||X|||
T:               ---------AcCCAgCACccTTACACCACACCACAcCTcTGT--------
R:         10   T233030103000013311232031110111101112023211122203.1    42        
--
>181_1977_3830_F3	ENSMUST00000113126	-	2595	2625	14	44	50	190	2x3x3x11x6x3x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                              ||X||X||X||||||||||X|||||X||X||
T:               -------------GAcAGaGGtGTGGTGTGGTgTCAGGgTGcTG------
R:         14   T130201030313132312320211101111010121203111212103.2    44        
--
>181_2149_2722_F3	ENSMUST00000113126	-	2597	2623	17	43	50	190	6x14x2x2x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                 ||||||X|||||||||||||X|X|X||
T:               ----------------CAGAGGtGTGGTGTGGTGTCaGgGtGC-------
R:         17   T233012303021111231222031110111101112222021331210.2    43        
--
>181_2723_3817_F3	ENSMUST00000113126	-	2599	2623	17	41	50	190	3x3x14x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||||X||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGGT---------
R:         17   T233020103010010001232031110111101112020010333300.1    41        
--
>182_105_956_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	3x13x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    |||X||||||||||||X||||
T:               -------------------CTGaCACCACACCACAcCTCT----------
R:         20   T23303013303331031323213111011110111202223033101110    40        
--
>182_519_4356_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	12x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     ||||||||||||X||||||
T:               --------------------AGGTGTGGTGTGgTGTCAG-----------
R:         21   T02230201030000302332320111101111211121220303030120    39        
--
>182_594_3970_F3	ENSMUST00000113126	-	2597	2620	20	43	50	180	3x14x2x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X|||||||||||||X|X||||
T:               -------------------AGGtGTGGTGTGGTGTCaGgGTGC-------
R:         20   T23302010302301031113203111011110111202201133220210    43        
--
>182_827_557_F3	ENSMUST00000113126	+	2948	2968	25	45	50	170	3x9x9	
G:       2948    TTTAGATATCTTTGAAATTGTAAATGACTAATTTGGTCATTAAATCTTGT    2968      
                                         |||X||||||||X||||||||
T:               ------------------------TGAcTAATTTGGtCATTAAAT-----
R:         25   T00133031111232232031110111232303001002130300301111    45        
--
>182_2282_2013_F3	ENSMUST00000113126	-	2602	2618	27	43	50	170	17	
G:       2618    GAAAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAA    2602      
                                           |||||||||||||||||
T:               --------------------------GTGTGGTGTGGTGTCAG-------
R:         27   T13003220201300201031212102311110111101112123332320    43        
--
>182_2716_2855_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23301010303333021123203111011110111201212023202013    36        
--
>182_3344_4532_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T13022011130213030333223111011110111102220323231321    40        
--
>183_50_2184_F3	ENSMUST00000113126	-	2604	2626	14	36	50	190	1x5x17	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||||||||||||||||
T:               -------------AgACAGaGGTGTGGTGTGGTGTC--------------
R:         14   T23102010300201121123201111011110111222212031331222    36        
--
>183_212_4854_F3	ENSMUST00000113126	-	2037	2060	26	49	50	160	1x7x2x7x7	
G:       2060    ACACAAAGGTCACCATGAAGGAGATAATATGGGAACAGATTTTAAGGAAA    2037      
                                          |X||||||X|X||||||X||||||
T:               -------------------------AaTATGGGaAcAGATTTtAAGGAA-
R:         26   T10333131123123203301011122233310030012230033020203    49        
--
>183_386_2272_F3	ENSMUST00000113126	-	2600	2623	18	41	50	200	3x11x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X|||||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAGGG---------
R:         18   T02330201030313112312320111101112011121200222322123    41        
--
>183_403_3947_F3	ENSMUST00000113126	-	2604	2625	15	36	50	200	5x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||||||||||||||||
T:               --------------GACAGaGGTGTGGTGTGGTGTC--------------
R:         15   T23102010300101121123201111011110111202300030231200    36        
--
>183_701_932_F3	ENSMUST00000113126	-	2596	2624	16	44	50	176	x4x3x14x4G3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                X|||X||X|||||||||||||X||| |||
T:               ---------------aCAGaGGtGTGGTGTGGTGTCaGGGGGCT------
R:         16   T23102010300301131123203111011110111202000032222020    44        
--
>183_761_2677_F3	ENSMUST00000113126	-	2729	2751	23	45	50	156	1x3A10x8	
G:       2751    GCCCAGTCTGTTGATATTACATATGCTTAGACACAATGATTTAAAAGACG    2729      
                                       |X|| ||||||||||X|||||||
T:               ----------------------AtGCATAGACACAATgATTTAAA-----
R:         23   T10201030313101312121313013133221111032230030031121    45        
--
>183_938_3161_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02330201030313312312320111101112011121330123332310    38        
--
>183_954_3219_F3	ENSMUST00000113126	-	2604	2623	17	36	50	180	6x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 ||||||X|||||||||||||
T:               ----------------CAGAGGtGTGGTGTGGTGTC--------------
R:         17   T23102010300001120122200111011110111201030003332232    36        
--
>183_985_4183_F3	ENSMUST00000113126	-	2604	2626	14	36	50	190	1x5x17	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||||||||||||||||
T:               -------------AgACAGaGGTGTGGTGTGGTGTC--------------
R:         14   T20102010300101121123201111011110111202203030202022    36        
--
>183_1116_3276_F3	ENSMUST00000113126	+	2282	2301	29	48	50	160	x4x16	
G:       2282    TGCGTGCGTAGCCTTCTAAGGCCTTCTCAACATGTCAGCGCCTGTGATCT    2301      
                                             X|||X|||||||||||||||
T:               ----------------------------aACAtGTCAGCGCCTGTGAT--
R:         29   T10123302010303331213023331110011111212333021112330    48        
--
>183_1444_1414_F3	ENSMUST00000113126	+	2589	2620	7	38	50	180	2x3x1x7x2x1x12x4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                       ||X||XX||||||X|XX|||||||||||X|||
T:               ------GGtACccAGCACCcTgaCACCACACCACaCCT------------
R:          7   T23302010031311231101233111011110113102000323221033    38        
--
>183_2009_4340_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23302010301301000113203111011110111102220012223032    40        
--
>183_2029_3115_F3	ENSMUST00000113126	+	2032	2049	4	21	50	160	6x12	
G:       2032    ATATTATCTTCCTTAAAATCTGTTCCCATATTGAACAGGCAGATTACAAA    2049      
                    ||||||X|||||||||||
T:               ---TTATCTtCCTTAAAATCT-----------------------------
R:          4   T10320332212020300032203131011210331212232233222221    21        
--
>183_2146_2297_F3	ENSMUST00000113126	-	2594	2623	17	46	50	186	x6x16x2G2x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                 X|||||X|||||||||||||||X| ||X||
T:               ----------------cAGAGGtGTGGTGTGGTGTCAGgGGGCtGG----
R:         17   T23302010322301322122203111011110111212300033103102    46        
--
>183_2840_1713_F3	ENSMUST00000113126	+	2589	2621	7	39	50	190	2x3x6x1x1x3x6x11	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                       ||X||X|||||XXX||X|||||X||||||||||
T:               ------GGtACcCAGCAcccTGaCACCAcACCACACCTC-----------
R:          7   T23302010331301231021213111013110111102230113322122    39        
--
>183_3366_4303_F3	ENSMUST00000113126	-	291	316	21	46	50	180	9x2x5x2x8	
G:        316    CCAGGGCCACAGCCGATATCAATCTTTGAGCTGTGTTTGAGCGTCTTTTA    291       
                                     |||||||||X|X||||X|X|||||||
T:               --------------------AATCTTTGAgCtGTGTtTgAGCGTCT----
R:         21   T30310311011012330030103220012331111120022331222203    46        
--
>184_126_1348_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030030102112320311101111011120330202.33232.    36        
--
>184_438_4408_F3	ENSMUST00000113126	-	2602	2624	16	38	50	190	2x2x19	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                ||X|X||||||||||||||||||
T:               ---------------ACaGaGGTGTGGTGTGGTGTCAG------------
R:         16   T2312201030030103132320111101111011121232320.13123.    38        
--
>184_561_2675_F3	ENSMUST00000113126	+	2591	2616	9	34	50	180	3x2x9x2x10	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                         |||X|X||||||||X|X|||||||||
T:               --------TACcCaGCACCCTGaCaCCACACCAC----------------
R:          9   T2312010303130323110021310101111011220133110.33133.    34        
--
>184_654_4326_F3	ENSMUST00000113126	-	2073	2099	9	35	50	170	1x3x5x1x2x15	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                         |X||X||||XX|X||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTA---------------
R:          9   T0013303111123223203111011123200011310211031.30131.    35        
--
>184_720_1276_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	x5x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               X||||X||X|||||||||||||X|||
T:               --------------gACAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T2310201030030112112320311101111011120200303.22122.    40        
--
>184_891_3557_F3	ENSMUST00000113126	-	2599	2625	15	41	50	170	x5x2x1x11x8	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               X||||X|XX||||||||||X|||||||
T:               --------------gACAGaGgtGTGGTGTGGTgTCAGGGT---------
R:         15   T2332201330300112112323311101111012121200133.32102.    41        
--
>184_970_2528_F3	ENSMUST00000113126	+	2597	2622	15	40	50	166	4x1x2T13x5	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                               ||||XX| |||||||||||||X||||
T:               --------------GCACccTTACACCACACCACAcCTCT----------
R:         15   T2332201030010113112320311101111011120222003.22222.    40        
--
>184_1055_1780_F3	ENSMUST00000113126	-	2600	2623	17	40	50	160	3x3x12x2x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||X|X|||
T:               ----------------CAGaGGtGTGGTGTGGTGtCaGGG----------
R:         17   T0112201330130131212320311101111011020200033.21322.    40        
--
>184_1248_3308_F3	ENSMUST00000113126	+	2594	2621	12	39	50	166	2x1T3x1x16x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            ||X |||XX|||||||||||||||X|||
T:               -----------CCaTCACccTGACACCACACCACAcCTC-----------
R:         12   T2330201030330232112321211101111011120223132.21302.    39        
--
>184_1367_4365_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030300332212320311101111011120022323.32122.    36        
--
>184_1564_4879_F3	ENSMUST00000113126	+	2594	2621	12	39	50	186	6x1G2x13x5	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            ||||||X ||X||||||||||||X||||
T:               -----------CCAGCAcGCTgACACCACACCACaCCTC-----------
R:         12   T2331201303130123123322211101111011210221010.30202.    39        
--
>184_1773_4287_F3	ENSMUST00000113126	-	2596	2623	16	43	50	180	3x3x8x8x3x3	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                |||X||X|||||||X|||||||X||X||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGgGTgCT-------
R:         16   T1032201033131323123203111011120111212101332.30023.    43        
--
>184_1973_2165_F3	ENSMUST00000113126	+	2602	2622	20	40	50	190	3x18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    |||X|||||||||||||||||
T:               -------------------CTGaCACCACACCACACCTCT----------
R:         20   T2330201032030303031321311101111011110222000.33230.    40        
--
>184_2145_4638_F3	ENSMUST00000113126	-	2601	2622	18	39	50	160	2x3x12x5	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  ||X||X|||||||||||X||||
T:               -----------------AGaGGtGTGGTGTGGTGtCAGG-----------
R:         18   T2300223231233002322320311101111011221203323.22021.    39        
--
>184_3214_275_F3	ENSMUST00000113126	+	2594	2625	12	43	50	186	3x1x3x1x2T13x8	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                            |||XX||XX| |||||||||||||X|||||||
T:               -----------CCAgcACccTTACACCACACCACAcCTCTGTC-------
R:         12   T2330201030330112112320311101111011120222112.02201.    43        
--
>184_3519_3708_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T2330201030030102012320311101111011120233323.23113.    36        
--
>185_739_4977_F3	ENSMUST00000113126	-	2602	2629	12	39	50	180	2x2x2x3x13x6	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X|X||X||||||||||||X|||||
T:               -----------TGtAgAcAGaGGTGTGGTGTGGtGTCAG-----------
R:         12   T02230201030313312312320111101111001121220033232122    39        
--
>185_942_3489_F3	ENSMUST00000113126	+	2601	2626	19	44	50	166	1x2T10x8x4	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                   |X| ||||||||||X|||||||X|||
T:               ------------------CcTTACACCACACCaCACCTCTgTCT------
R:         19   T10302010300331120133203111011110211102222122232102    44        
--
>185_1320_880_F3	ENSMUST00000113126	-	2601	2622	18	39	50	160	2x3x14x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  ||X||X|||||||||||||X||
T:               -----------------AGaGGtGTGGTGTGGTGTCaGG-----------
R:         18   T23102013301001300323203111011110111202030032332022    39        
--
>185_1343_2436_F3	ENSMUST00000113126	-	2600	2629	12	41	50	200	2x2x2x3x12x9	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                            ||X|X|X||X|||||||||||X||||||||
T:               -----------TGtAgAcAGaGGTGTGGTGTGgTGTCAGGG---------
R:         12   T02230201030313312312020111101111111121200232100213    41        
--
>185_1633_2841_F3	ENSMUST00000113126	+	2591	2622	9	40	50	186	1x5x2x2x1x2T18	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                         |X||||X|X|XX| ||||||||||||||||||
T:               --------TaCCCAgCaCccTTACACCACACCACACCTCT----------
R:          9   T23102010301001330113203111011110111102220002233331    40        
--
>185_1812_4085_F3	ENSMUST00000113126	+	2597	2622	15	40	50	180	x4x4x13x5	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                               X|||X|||X||||||||||||X||||
T:               --------------gCACcCTGaCACCACACCACAcCTCT----------
R:         15   T10332010313331031120213111011110111202220031123032    40        
--
>185_2287_2341_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23300010303033320123203111011110111202330301330232    36        
--
>185_3807_1651_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23302010303303022113203111011110111102223003313201    40        
--
>186_146_863_F3	ENSMUST00000113126	-	2603	2629	12	38	50	170	2x2x2x3x11x7	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                            ||X|X|X||X||||||||||X||||||
T:               -----------TGtAgAcAGaGGTGTGGTGTgGTGTCA------------
R:         12   T02230201030313312312320111101112011121320311223220    38        
--
>186_622_4233_F3	ENSMUST00000113126	+	2604	2630	22	48	50	176	13T5x2x1x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                      ||||||||||||| |||||X|XX||||
T:               ---------------------GACACCACACCACTCCTCTgTctACAC--
R:         22   T23102010303001320123202111011110112202220103311121    48        
--
>186_1640_3499_F3	ENSMUST00000113126	-	2592	2631	9	48	50	192	2x1x2x4x2x11x6C3x4C3	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2592      
                         ||XX|X|||X|X||||||||||X||||| |||X||| |||
T:               --------GGtgTaGACaGaGGTGTGGTGTgGTGTCCGGGtGCTCGGT--
R:          9   T01331013303011221223201111011120111203000132230101    48        
--
>187_1472_3775_F3	ENSMUST00000113126	-	2604	2625	16	37	50	180	2x14x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                ||X|||||||||||||X|||||
T:               ---------------GAcAGAGGTGTGGTGTgGTGTC-------------
R:         16   T31130201030313112312220111101112011120030232111233    37        
--
>187_1699_425_F3	ENSMUST00000113126	-	80	116	10	46	50	170	2x4x3x2x2x11x2x3x2x1x5	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    80        
                          ||X|||X||X|X|X||||||||||X|X||X|XX||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGtCgAAtAtgAGCT----
R:         10   T10330003031313231230222131111212122120130322320122    46        
--
>188_611_665_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	5x3x12x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||X|||||||||||X|X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         15   T23122010300301121123203111011110112202003002311200    40        
--
>188_1333_1706_F3	ENSMUST00000113126	+	2601	2622	19	40	50	166	1x2T18	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                   |X| ||||||||||||||||||
T:               ------------------CcTTACACCACACCACACCTCT----------
R:         19   T33112013331003001323203111011110111102223223213331    40        
--
>188_1702_3045_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x3x8x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||X|||||||X|||||||||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGGG---------
R:         18   T31330201030313112312020311101112011121200233321210    41        
--
>188_1760_4670_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T02330201030313312312320111101112011121223022231110    39        
--
>188_2206_2213_F3	ENSMUST00000113126	-	2604	2631	9	36	50	186	4x1x6x2A14	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                         ||||XX|||||X| ||||||||||||||
T:               --------GGTGtaGACAGaGATGTGGTGTGGTGTC--------------
R:          9   T23332010301101221123223111011110111202322030001111    36        
--
>188_2830_1566_F3	ENSMUST00000113126	+	2599	2622	17	40	50	166	2x1x2T18	
G:       2599    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                 ||XX| ||||||||||||||||||
T:               ----------------ACccTTACACCACACCACACCTCT----------
R:         17   T23302032100323023113203111011110111102223033331302    40        
--
>189_347_4083_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x12x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X|||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTGgTGTCAG-----------
R:         16   T02130201030310212312320111101111111121230333320221    39        
--
>189_563_2961_F3	ENSMUST00000113126	+	2604	2621	22	39	50	160	1x17	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                      |X||||||||||||||||
T:               ---------------------GaCACCACACCACACCTC-----------
R:         22   T23102010320300000323203111011110111102233010012121    39        
--
>189_700_637_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23102010300101031123203111011110111200233032022233    36        
--
>189_997_2302_F3	ENSMUST00000113126	-	2607	2625	15	33	50	170	5x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTACTGTTTGAAAAAAAAT    2607      
                               |||||X|||||||||||||
T:               --------------GACAGaGGTGTGGTGTGGT-----------------
R:         15   T23302010300301121123201111011110100202302033232200    33        
--
>189_1005_623_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010303101121123203111011110111202222323221122    36        
--
>189_1832_2374_F3	ENSMUST00000113126	-	2593	2623	17	47	50	176	3x3x14C3x1x3x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                 |||X||X||||||||||||| |||XX||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCCGGGtgCTgGG---
R:         17   T20302010300301302123203111011110111203003032200200    47        
--
>189_1868_4602_F3	ENSMUST00000113126	-	2606	2634	6	34	50	170	1x4x2x2x5x3x12	
G:       2634    AAATTTCTGGTGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                      |X|||X|X|X||||X||X|||||||||||
T:               -----TcTGGtGtAgACAGaGGtGTGGTGTGGTG----------------
R:          6   T23302012103103321123203111011110113232333122223333    34        
--
>189_2103_652_F3	ENSMUST00000113126	+	2597	2628	15	46	50	186	2x2x1x2T16x2x6	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                               ||X|XX| ||||||||||||||||X|X|||||
T:               --------------GCaCccTTACACCACACCACACCTcTgTCTAC----
R:         15   T23102013300301032123203111011110111102323122310322    46        
--
>189_2174_2230_F3	ENSMUST00000113126	-	2601	2629	20	48	50	170	2x2x2x3x3x12x5	
G:       2629    GAAAGAAAGAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTG    2601      
                                    ||X|X|X||X||X|||||||||||X||||
T:               -------------------TGtAgAcAGaGGtGTGGTGTGGTGtCAGG--
R:         20   T33131231113302010303133123123203111011110112212021    48        
--
>189_2267_2595_F3	ENSMUST00000113126	+	2223	2245	17	39	50	170	4x11x5x3	
G:       2223    TGTGCCCAGCGTAAGTGCATGCGTGGGTGCGTGCGTGCGTGCGTGCGTGC    2245      
                                 ||||X||||||||||X||||X||
T:               ----------------GCATgCGTGGGTGCGtGCGTgCG-----------
R:         17   T12010303131323310313333110011330133103332002302033    39        
--
>189_2445_1276_F3	ENSMUST00000113126	-	719	753	2	36	50	170	1x2x10x6x1x4x2x2x3x4	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||||||||X|||||XX|||X|X|X||X|||
T:               -CaGcAATATGCAGgCAGTAggCACtGaCaTTgTCA--------------
R:          2   T20020103331312231213113113111230012103010032111021    36        
--
>189_3816_4304_F3	ENSMUST00000113126	+	2605	2626	23	44	50	200	18x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       ||||||||||||||||||X|||
T:               ----------------------ACACCACACCACACCTCTgTCT------
R:         23   T23302010301103200313203111011110111102220122232130    44        
--
>189_4052_2650_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x1x18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||XX|||||||||||||||||
T:               -------------------CTgaCACCACACCACACCTCT----------
R:         20   T23102010303001312123233111011110111102222130321122    40        
--
>190_141_479_F3	ENSMUST00000113126	-	2602	2625	16	39	50	200	5x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                |||||X||||||||||X|||||||
T:               ---------------GACAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T0233020103031331211232011110111201112121033.22033.    39        
--
>190_2436_2455_F3	ENSMUST00000113126	+	2600	2622	18	40	50	170	2x3x13x5	
G:       2600    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                  ||X||X||||||||||||X||||
T:               -----------------CCcTGaCACCACACCACAcCTCT----------
R:         18   T2330201030310132130321111101111011100222302.12023.    40        
--
>190_2906_1585_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T0013303111123223203111011123200011300012023.20122.    36        
--
>191_1348_2676_F3	ENSMUST00000113126	+	1430	1450	18	38	50	170	2x12x7	
G:       1430    ACGTATCTAAGCAGCCATGACTACAAGCACCTGTACTTCGAGTCCGACGC    1450      
                                  ||X|||||||||||X||||||
T:               -----------------TGaCTACAAGCACCtGTACTT------------
R:         18   T2310201030310122211312311023110111312032010.022130    38        
--
>191_1478_1654_F3	ENSMUST00000113126	+	2583	2621	1	39	50	176	4x2x2x1x6x1x1x2x2T10x7	
G:       2583    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                 ||||X|X|XX|||||XXX|X| ||||||||||X||||||
T:               AGGCaAgGtaCCCAGcacCcTTACACCACACCaCACCTC-----------
R:          1   T3203201030100120020320311101111021110223303.122101    39        
--
>191_1657_1103_F3	ENSMUST00000113126	-	2603	2625	16	38	50	190	2x14x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X|||||||||||||X||||||
T:               ---------------GAcAGAGGTGTGGTGTgGTGTCA------------
R:         16   T1223020103031331231222011110111201112103003.311303    38        
--
>191_1717_774_F3	ENSMUST00000113126	-	91	114	12	35	50	180	4x3x2x15	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                            ||||X||X|X||||||||||||||
T:               -----------CATCaCTgGtCACGTGTGACTGTC---------------
R:         12   T3330201330311323123022113111121211210010302.221112    35        
--
>191_1848_4595_F3	ENSMUST00000113126	-	2595	2615	16	36	50	170	1x12x8	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGAAAATCCCTCAAAG    2595      
                                |X|||||||||||X|||||||
T:               ---------------TgGTGTGGTGTCAgGGTGCTG--------------
R:         16   T0013303111123223201111011121300113211220300.100122    36        
--
>191_2879_1636_F3	ENSMUST00000113126	-	2079	2100	13	34	50	160	1x4x5x12	
G:       2100    ATGGATTCTCCCTCTGAGAGCTCCAACCACAGCTGGTCACCATGAAGGAG    2079      
                             |X|||X||||X|||||||||||
T:               ------------TcTGAgAGCTcCAACCACAGCT----------------
R:         13   T3133020103031321232232001010111232102332110.332200    34        
--
>191_3101_1052_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T0013303111123223203111011123200311300112030.312311    36        
--
>191_3368_4830_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x11x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:          9   T0013303111122223203111011123200312300003031.111222    36        
--
>192_401_3416_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T0013020103031311231232011110111201112132033320223.    38        
--
>192_1200_4730_F3	ENSMUST00000113126	-	2596	2623	18	45	50	180	3x11x6x2x2x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||||||||||X|||||X|X|X|||
T:               -----------------CAGaGGTGTGGTGTgGTGTCaGgGtGCT-----
R:         18   T0233020103031311231232011110111201112023021320022.    45        
--
>192_2084_1064_F3	ENSMUST00000113126	-	2593	2631	9	47	50	182	3x4C1T1x15x2x2x1x5x3	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                         |||X||| | |X||||||||||||||X|X|XX||||X||
T:               --------GGTgTAGCCTGaGGTGTGGTGTGGTGtCaGggTGCTgGG---
R:          9   T0100201300101323021320111101111011320212113200023.    47        
--
>192_3993_343_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T0013303111122223203111011123200311300331010010123.    36        
--
>192_4111_1121_F3	ENSMUST00000113126	+	2589	2616	7	34	50	166	3x2x2x5G2x13	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                       |||X|X|X|||| ||X||||||||||||
T:               ------GGTaCcCaGCACGCTgACACCACACCAC----------------
R:          7   T2330201012130323113320211101111011320321013123010.    34        
--
>193_307_414_F3	ENSMUST00000113126	+	2592	2620	10	38	50	170	1x4x4x1x2x14x3	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                          |X|||X|||XX|X|||||||||||||X||
T:               ---------AcCCAgCACccTgACACCACACCACAcCT------------
R:         10   T2310201000000103112320211101111011120233002303230.    38        
--
>193_759_2385_F3	ENSMUST00000113126	-	2606	2625	15	34	50	180	5x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||||||||||||||
T:               --------------GACAGaGGTGTGGTGTGGTG----------------
R:         15   T2310201030330102112320111101111011320232333223100.    34        
--
>193_783_3048_F3	ENSMUST00000113126	-	2594	2612	19	37	50	170	15x4	
G:       2612    ACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGAAATCCCTCAAAG    2594      
                                   |||||||||||||||X|||
T:               ------------------TGTGGTGTCAGGGTGcTGG-------------
R:         19   T0013303111122223203111011121200111210323301220233.    37        
--
>193_1006_401_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T2330201030000112112320311101111011120220312023020.    36        
--
>193_1553_1875_F3	ENSMUST00000113126	+	2604	2625	22	43	50	180	1x18x3	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                      |X|||||||||||||||||X||
T:               ---------------------GaCACCACACCACACCTCTgTC-------
R:         22   T2310201030030130212320311101111011110222212323201.    43        
--
>193_1734_3021_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	12x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||X|||||
T:               ----------------------ACACCACACCACaCCTCT----------
R:         23   T2110201030030230212320311101111011010222303212213.    40        
--
>193_2228_1602_F3	ENSMUST00000113126	+	2591	2622	9	40	50	220	1x5x4x1x3x18	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                         |X||||X|||XX||X|||||||||||||||||
T:               --------TaCCCAgCACccTGaCACCACACCACACCTCT----------
R:          9   T2310201030100103112321311101111011110222002002002.    40        
--
>193_2251_1915_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2310201030330112012320311101111011110220203330231.    39        
--
>193_2269_2768_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2330201030130331011320311101111011110222232322102.    40        
--
>193_2749_2349_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2310201030000130012320311101111011110223302122332.    39        
--
>193_2787_482_F3	ENSMUST00000113126	-	2601	2625	15	39	50	190	2x1x2x20	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               ||XX|X|||||||||||||||||||
T:               --------------GAcaGaGGTGTGGTGTGGTGTCAGG-----------
R:         15   T0100201330001132022320111101111011121202012223011.    39        
--
>193_2873_1849_F3	ENSMUST00000113126	-	2596	2621	19	44	50	180	4x13x1x4x4	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                   ||||X||||||||||||XX|||X|||
T:               ------------------GAGGtGTGGTGTGGTGTcaGGGtGCT------
R:         19   T3330201003030311211220311101111011110200313223222.    44        
--
>193_2888_1442_F3	ENSMUST00000113126	-	2599	2622	18	41	50	180	2x13x6x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                  ||X||||||||||||X|||||X||
T:               -----------------AGaGGTGTGGTGTGGtGTCAGgGT---------
R:         18   T0100201330001132222320111101111021121220131133101.    41        
--
>194_897_76_F3	ENSMUST00000113126	+	2596	2616	14	34	50	190	x21	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                              X||||||||||||||||||||
T:               -------------aGCACCCTGACACCACACCAC----------------
R:         14   T2310210300131323110021211101111011200100122.02033.    34        
--
>194_1079_1235_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x2x15x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X|X||||||||||||||X||
T:               ----------------CAGaGgTGTGGTGTGGTGTCaGG-----------
R:         17   T2330201000310300212323111101111011120203130.12323.    39        
--
>194_1312_913_F3	ENSMUST00000113126	+	2595	2620	13	38	50	180	7x1x2x12x4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                             |||||||XX|X|||||||||||X|||
T:               ------------CAGCACCctGaCACCACACCACaCCT------------
R:         13   T3332210003131123110331311101111011210200303.30213.    38        
--
>194_1549_1549_F3	ENSMUST00000113126	+	2587	2620	5	38	50	186	5x5x1x2x1G2x14x3	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                     |||||X||||XX|X ||X|||||||||||||X||
T:               ----AAGGTaCCCAgcAcGCTgACACCACACCACAcCT------------
R:          5   T3223302010100131123320211101111011120212303.32131.    38        
--
>194_1640_3576_F3	ENSMUST00000113126	+	2589	2631	7	49	50	166	3x1x1x2x5x1x2T13x4x1x2x1x6	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                       |||XXX|X||||XX| |||||||||||||X|||XX|XX|||||
T:               ------GGTaccCaGCACccTTACACCACACCACAcCTCtgTctACACC-
R:          7   T2330201010030323112320311101111011120223313.21110.    49        
--
>194_1640_3576_F3	ENSMUST00000113126	-	2604	2627	13	36	50	160	x3x4x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             X||X|||X||X|||||||||||||
T:               ------------tAGaCAGaGGtGTGGTGTGGTGTC--------------
R:         13   T2330201010030323112320311101111011120223313.21110.    36        
--
>194_1904_1824_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2330201020130133212320311101111011110223000.22301.    39        
--
>194_2279_1835_F3	ENSMUST00000113126	-	2602	2623	19	40	50	180	x6x16	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAA    2602      
                                   X|||||X|||||||||||||||
T:               ------------------cAGAGGtGTGGTGTGGTGTCAG----------
R:         19   T3323302010300031023122203111011110111212323.30100.    40        
--
>194_3138_3141_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x2x3x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||X||||||||||X|||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T0233020103031031231232011110111201112121000.20213.    39        
--
>194_3198_1478_F3	ENSMUST00000113126	+	2583	2619	1	37	50	174	x9T3C1x1x2G2T15	
G:       2583    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                 X|||||||| ||| |XX| || |||||||||||||||
T:               aGGCAAGGTTCCCCGcaCGCTTACACCACACCACACC-------------
R:          1   T2203102010200030013320311101111011110301012.22232.    37        
--
>194_3231_3230_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330223030230130112320311101111011120323013.22023.    36        
--
>194_3569_2393_F3	ENSMUST00000113126	-	2595	2623	17	45	50	180	x3x3x13x1x9	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                 X||X||X||||||||||||XX||||||||
T:               ----------------cAGaGGtGTGGTGTGGTGTcaGGGTGCTG-----
R:         17   T2330201032030230212320311101111011110200113.22131.    45        
--
>194_3815_579_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T2330201000130132312320311101111011121322002.32221.    37        
--
>194_4059_4557_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T0100101330301331222320111101111011120020012.03113.    36        
--
>195_565_4307_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x11x6x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||||||||||X|||||X|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCaGGG---------
R:         16   T02130201030313112312320111101112011123200011200221    41        
--
>195_2389_1029_F3	ENSMUST00000113126	-	2599	2617	23	41	50	170	14x5	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                       ||||||||||||||X||||
T:               ----------------------TGTGGTGTGGTGTCaGGGT---------
R:         23   T23302010301301002323203111011110111202001303232301    41        
--
>195_3571_4217_F3	ENSMUST00000113126	-	2067	2099	9	41	50	170	1x3x5x1x2x7x9x1x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                         |X||X||||XX|X||||||X||||||||XX|||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAAtcTGC---------
R:          9   T00133031111232232031110111202000113000213313200022    41        
--
>196_301_2094_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T2310201230030003121320111101111011120221003322131.    36        
--
>196_340_1151_F3	ENSMUST00000113126	+	2602	2622	20	40	50	190	8x13	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||||||||X||||||||||||
T:               -------------------CTGACACCaCACCACACCTCT----------
R:         20   T3323302110000331033321211102111011110222201310031.    40        
--
>196_613_3167_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x14x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||X|||||||||||||X||||
T:               -------------------CTgACACCACACCACAcCTCT----------
R:         20   T2332201030310111332323211101111011120222303223220.    40        
--
>196_646_2390_F3	ENSMUST00000113126	+	2576	2601	1	26	50	200	x6x9x11	
G:       2576    GCAGAAAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTC    2601      
                 X|||||X||||||||X||||||||||
T:               gCAGAAaAGGCAAGGtACCCAGCACC------------------------
R:          1   T3312201020310203310012311010230011300220300223013.    26        
--
>196_1043_4921_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	2x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  ||X||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTC--------------
R:         18   T0100201330331132222320111101111011123313011131222.    36        
--
>196_1085_3791_F3	ENSMUST00000113126	+	2592	2620	10	38	50	176	1x6x2x1x2T16	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                          |X|||||X|XX| ||||||||||||||||
T:               ---------AcCCAGCaCccTTACACCACACCACACCT------------
R:         10   T0330201330000123212320311101111011110200202121122.    38        
--
>196_2298_133_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x8x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X|||||||X|||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAG-------------
R:         14   T1313010303131323123203111011120111212323011333023.    37        
--
>196_2302_4064_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	5x11x5	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   |||||X||||||||||X||||
T:               ------------------AGAGGtGTGGTGTGGTgTCAG-----------
R:         19   T3133020103031331233222031110111101212122332130111.    39        
--
>196_2446_1423_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T3133020103031311231232011110111201112113001131223.    38        
--
>196_3709_3337_F3	ENSMUST00000113126	-	91	116	10	35	50	160	2x4x3x2x2x13	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                          ||X|||X||X|X|X||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTC---------------
R:         10   T1302010303131323123022313111121211213303012222023.    35        
--
>197_800_4251_F3	ENSMUST00000113126	+	2605	2628	23	46	50	170	13x5x1x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                       |||||||||||||X||||XX||||
T:               ----------------------ACACCACACCACAcCTCTgtCTAC----
R:         23   T2110201030010102212320311101111011120222302.3103..    46        
--
>197_868_702_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2312201330320102112320211101111011120232213.0322..    36        
--
>197_1087_3105_F3	ENSMUST00000113126	-	2599	2623	14	38	50	170	3x3x13x1x5	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                              |||X||X||||||||||||XX||||
T:               -------------CAGaGGtGTGGTGTGGTGTcaGGGT------------
R:         14   T2201030313112312320311101111011100200123000.3011..    38        
--
>197_1125_1021_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T2333201330213113212320111101111011120222302.0202..    36        
--
>197_1147_2678_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2310201330030102112320311101111011120120000.0312..    36        
--
>197_1319_2691_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	5x3x12x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||X|X||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGG-----------
R:         15   T3230201030120112112320311101111011320202322.1101..    39        
--
>197_1433_2441_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T2310201030030123112320311101111011120131302.2123..    36        
--
>197_1499_463_F3	ENSMUST00000113126	-	2599	2620	20	41	50	160	3x12x2x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                    |||X|||||||||||X|X||||
T:               -------------------AGGtGTGGTGTGGTGtCaGGGT---------
R:         20   T1030201030300132010320311101111011320200102.3003..    41        
--
>197_1587_901_F3	ENSMUST00000113126	-	2603	2623	16	36	50	170	3x3x15	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                                |||X||X||||||||||||||
T:               ---------------CAGaGGtGTGGTGTGGTGTCA--------------
R:         16   T1302010303131123123203111011110111210231331.1130..    36        
--
>197_1654_4817_F3	ENSMUST00000113126	+	2589	2617	7	35	50	170	2x3x3x4x1x2x14	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2617      
                       ||X||X||X|||XX|X|||||||||||||
T:               ------GGtACcCAgCACccTgACACCACACCACA---------------
R:          7   T2330201033130103112320211101111011100301221.0103..    35        
--
>197_1732_2127_F3	ENSMUST00000113126	+	2596	2621	14	39	50	166	x5x1x2T17	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                              X||||XX| |||||||||||||||||
T:               -------------aGCACccTTACACCACACCACACCTC-----------
R:         14   T2330201030230323112320311101111011110220100.3011..    39        
--
>197_1914_534_F3	ENSMUST00000113126	-	2604	2629	11	36	50	200	2x2x5x17	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||X|X||||X||||||||||||||||
T:               ----------TGtAgACAGaGGTGTGGTGTGGTGTC--------------
R:         11   T0330201030010302112320111101111011120112100.1202..    36        
--
>197_1928_685_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x12x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||X|||||
T:               -------------------AGGtGTGGTGTGGTGtCAGGG----------
R:         20   T2330201330000003031320311101111011321200320.0103..    40        
--
>197_2082_3039_F3	ENSMUST00000113126	+	2595	2622	13	40	50	180	5x2x2x1x15x3	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                             |||||X|X|XX||||||||||||||X||
T:               ------------CAGCAcCcTgaCACCACACCACACCtCT----------
R:         13   T2330201030231123120323311101111011110122000.2020..    40        
--
>197_2195_942_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x3x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX||X||||||||||X||||
T:               --------CtGAGAGCTccAAcCACAGCTTTTgTAAT-------------
R:          9   T0013303111122223201102011123200031303323011.2022..    37        
--
>197_2272_2541_F3	ENSMUST00000113126	+	2605	2620	23	38	50	160	16	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                       ||||||||||||||||
T:               ----------------------ACACCACACCACACCT------------
R:         23   T3330201030200030012320311101111011110233203.2123..    38        
--
>197_2331_2931_F3	ENSMUST00000113126	-	2597	2620	17	40	50	180	3x12x4x5	
G:       2620    TTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                                 |||X|||||||||||X|||X||||
T:               ----------------AGGtGTGGTGTGGTGtCAGgGTGC----------
R:         17   T2201030313102312320311101111011321210113002.3332..    40        
--
>197_2393_4195_F3	ENSMUST00000113126	-	2599	2620	19	40	50	160	3x9x7x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X||||||||X||||||X||
T:               ------------------AGGtGTGGTGTGgTGTCAGgGT----------
R:         19   T0202010303131023123203111011113111212201313.3203..    40        
--
>197_2540_1129_F3	ENSMUST00000113126	+	2604	2625	22	43	50	180	1x13x8	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                      |X||||||||||||X|||||||
T:               ---------------------GaCACCACACCACAcCTCTGTC-------
R:         22   T2310201030100100011320311101111011100222112.2203..    43        
--
>197_2578_4625_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	2x3x3x7x9	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X||||||X||||||||
T:               --------------GAcAGaGGtGTGGTGtGGTGTCAG------------
R:         15   T2220201030331132312320311101131011121230033.2221..    38        
--
>197_2728_1506_F3	ENSMUST00000113126	-	2593	2629	11	47	50	172	2x1x6C2x13x3C2x1x5	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                           ||XX||||| ||X||||||||||||X|| ||XX||||
T:               ----------TGtaGACAGCGGtGTGGTGTGGTGTcAGCGTgcTGGG---
R:         11   T2230201030310122112330311101111011131233130.0003..    47        
--
>197_2949_885_F3	ENSMUST00000113126	-	2604	2628	12	36	50	170	2x3x1x2x17	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                            ||X||XX|X||||||||||||||||
T:               -----------GTaGAcaGaGGTGTGGTGTGGTGTC--------------
R:         12   T0100201330301122322320111101111011123033302.0201..    36        
--
>197_3255_1224_F3	ENSMUST00000113126	-	2600	2617	23	40	50	160	14x4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                       ||||||||||||||X|||
T:               ----------------------TGTGGTGTGGTGTCaGGG----------
R:         23   T2310201030100330012320311101111011120200300.3000..    40        
--
>197_3698_951_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2330201030010100012320311101111011110221301.2023..    39        
--
>197_3945_239_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T0310201030313132312320311101111011121320031.0302..    37        
--
>198_561_268_F3	ENSMUST00000113126	-	2601	2623	17	39	50	190	1x2x20	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |X|X|||||||||||||||||||
T:               ----------------CaGaGGTGTGGTGTGGTGTCAGG-----------
R:         17   T0111201322101132322320111101111011121201131.210213    39        
--
>198_635_4407_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x2x3x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||X||||||||||X|||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T0203020103031331231232011110111201112122022.321331    39        
--
>198_639_4329_F3	ENSMUST00000113126	+	2608	2628	21	41	50	176	12A8	
G:       2608    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2628      
                                     |||||||||||| ||||||||
T:               --------------------CCACACCACACCACTGTCTAC---------
R:         21   T0100200100201112022320111101111011211223103.220322    41        
--
>198_716_367_F3	ENSMUST00000113126	-	2603	2625	14	36	50	170	2x3x11x7	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                              ||X||X||||||||||X||||||
T:               -------------GAcAGaGGTGTGGTGTgGTGTCA--------------
R:         14   T3102010303131323123201111011120111210213021.021223    36        
--
>198_959_2976_F3	ENSMUST00000113126	+	2604	2627	22	45	50	170	14x2x3x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      ||||||||||||||X|X||X||||
T:               ---------------------GACACCACACCACAcCtCTgTCTA-----
R:         22   T2330201000310112112323211101111011120322312.321322    45        
--
>198_1537_521_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T3212201030320132312320311101111011122133333.122222    36        
--
>198_1722_4241_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T0233020103031311231232011110111201112132332.231122    38        
--
>198_1971_903_F3	ENSMUST00000113126	-	2595	2623	18	46	50	180	3x11x6x2x3x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                  |||X||||||||||X|||||X|X||X|||
T:               -----------------CAGaGGTGTGGTGTgGTGTCaGgGTgCTG----
R:         18   T0233020103031311231212011110111201112323012.211311    46        
--
>198_1987_1976_F3	ENSMUST00000113126	-	2602	2625	15	38	50	166	1x4C15x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |X||| |||||||||||||||X||
T:               --------------GaCAGCGGTGTGGTGTGGTGTcAG------------
R:         15   T1330201310320110112330111101111011101212320.323321    38        
--
>198_2072_385_F3	ENSMUST00000113126	-	2603	2620	19	36	50	160	3x15	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                                   |||X||||||||||||||
T:               ------------------AGGtGTGGTGTGGTGTCA--------------
R:         19   T0202010303131023123203111011110111210232013.300232    36        
--
>198_2107_1775_F3	ENSMUST00000113126	+	2604	2625	22	43	50	180	1x13x8	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                      |X||||||||||||X|||||||
T:               ---------------------GaCACCACACCACAcCTCTGTC-------
R:         22   T2330201300030330032320311101111011120222112.202332    43        
--
>198_2403_2640_F3	ENSMUST00000113126	+	2601	2622	19	40	50	166	1x2T18	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                   |X| ||||||||||||||||||
T:               ------------------CcTTACACCACACCACACCTCT----------
R:         19   T2310201330000112012320311101111011110222003.221103    40        
--
>198_2654_4379_F3	ENSMUST00000113126	+	2594	2622	12	40	50	156	3x2x2x1x2T11x7	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||X|X|XX| |||||||||||X||||||
T:               -----------CCAgCaCccTTACACCACACCAcACCTCT----------
R:         12   T2330201030330133212320311101111012110222330.221122    40        
--
>198_2687_2648_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2310201030130130032320311101111011110222211.202313    40        
--
>198_2794_1848_F3	ENSMUST00000113126	+	2602	2622	20	40	50	210	21	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    |||||||||||||||||||||
T:               -------------------CTGACACCACACCACACCTCT----------
R:         20   T2330201030130010132321211101111011110222013.223311    40        
--
>198_3031_1255_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	3x2x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||X|X||||||||||||||||
T:               --------------GACaGaGGTGTGGTGTGGTGTC--------------
R:         15   T0100201331101132122320111101111011123322003.020133    36        
--
>198_3076_2198_F3	ENSMUST00000113126	-	2606	2631	9	34	50	180	2x8x1x3x12	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                         ||X|||||||XX||X|||||||||||
T:               --------GGtGTAGACAgaGGtGTGGTGTGGTG----------------
R:          9   T1310301330311322111320311101111011020233300.021333    34        
--
>198_3167_1899_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T2330201030120130112320311101111011120122033.221213    36        
--
>198_3221_1172_F3	ENSMUST00000113126	-	2595	2620	20	45	50	176	3x14x4G4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                    |||X|||||||||||||X||| ||||
T:               -------------------AGGtGTGGTGTGGTGTCaGGGGGCTG-----
R:         20   T2330221330020123032320311101111011120200003.231133    45        
--
>198_3342_1513_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x11x5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X||||||||||X||||
T:               -------------GAcAGaGGtGTGGTGTGGTgTCAG-------------
R:         14   T1302010303131323123203111011110131212323031.213333    37        
--
>198_3390_1709_F3	ENSMUST00000113126	-	2602	2622	18	38	50	190	2x19	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTCAG------------
R:         18   T0100001320311132322320111101111011121222033.202211    38        
--
>198_3516_2602_F3	ENSMUST00000113126	+	2592	2621	10	39	50	172	5x2x1T1x2T17	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                          |||||X|X |X| |||||||||||||||||
T:               ---------ACCCAgCaTCcTTACACCACACCACACCTC-----------
R:         10   T3310201032100103232320311101111011110221333.231233    39        
--
>198_3658_4444_F3	ENSMUST00000113126	-	719	753	2	36	50	190	3x8x2x7x5x1x3x3x3	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |||X|||||||X|X||||||X||||XX||X||X||
T:               -CAGcAATATGCaGgCAGTAGgCACTgaCAtTGtCA--------------
R:          2   T2012010333130223121322311201111013210323102.321102    36        
--
>198_3684_1715_F3	ENSMUST00000113126	-	730	750	5	25	50	170	10x6x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||||||||X|||||X||||
T:               ----CAATATGCAGgCAGTAgGCAC-------------------------
R:          5   T1333010333131223121310311120130023200021030.331122    25        
--
>198_3759_573_F3	ENSMUST00000113126	-	717	753	2	38	50	210	2x1x10x11x1x1x3x5x3	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATTTGAGAGACAGGT    717       
                  ||XX|||||||||X||||||||||XXX||X||||X||
T:               -CAgcAATATGCAGgCAGTAGGCACtgaCAtTGTCaTT------------
R:          2   T2013010333131223121320311101110011203021303.331132    38        
--
>198_3932_1527_F3	ENSMUST00000113126	-	2599	2623	18	42	50	170	3x11x2x3x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |||X||||||||||X|X||X|||||
T:               -----------------CAGaGGTGTGGTGTgGtGTcAGGGT--------
R:         18   T3133020103031300231232011110111203110120010.320311    42        
--
>198_3956_2084_F3	ENSMUST00000113126	+	2605	2629	23	47	50	180	12x5x3x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                       ||||||||||||X||||X||X||||
T:               ----------------------ACACCACACCACaCCTCtGTcTACA---
R:         23   T2330201030100300212320311101111011210223110.311332    47        
--
>198_4149_1864_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	12x7	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||||X||||||
T:               ---------------------GACACCACACCAcACCTCT----------
R:         22   T2330201030130220132320211101111013110222232.131031    40        
--
>199_869_1553_F3	ENSMUST00000113126	-	2603	2627	14	38	50	170	2x2x3x13x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X|X||X||||||||||||X||||
T:               -------------TAgAcAGaGGTGTGGTGTGGtGTCA------------
R:         14   T02330201030013312312320111101111021121322330222..0    38        
--
>199_914_1656_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T31330201030313312312320111101112011121010011201..3    38        
--
>199_1018_1658_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x16x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X|||||||||||||||X||
T:               ---------------GAcAGaGGTGTGGTGTGGTGTcAG-----------
R:         16   T31330201030313312312320111101111011101220031032..3    39        
--
>199_1331_754_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T33202010301102300133203111011110111302221221230..3    41        
--
>199_2144_1959_F3	ENSMUST00000113126	+	2605	2632	23	50	50	180	12x6x2x1x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                       ||||||||||||X|||||X|XX||||||
T:               ----------------------ACACCACACCACaCCTCTgTctACACCA
R:         23   T01002013302311333233203111011110113102220131311..2    50        
--
>199_2431_1331_F3	ENSMUST00000113126	-	2600	2622	15	37	50	170	2x3x12x6	
G:       2622    TTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCC    2600      
                               ||X||X|||||||||||X|||||
T:               --------------AGaGGtGTGGTGTGGTGtCAGGG-------------
R:         15   T22010302131323220203111011110113212000013132113..0    37        
--
>199_2468_4201_F3	ENSMUST00000113126	-	2591	2622	19	50	50	166	2x11x7x1x1C2x7	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2591      
                                   ||X||||||||||X||||||XX ||X||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAggCTGcTGGGTA
R:         19   T02130201030313112332320111101112011121333211210..1    50        
--
>199_2471_4202_F3	ENSMUST00000113126	-	2594	2622	19	47	50	196	2x11x8C1x6	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                   ||X||||||||||X||||||| |X|||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGCGtGCTGG---
R:         19   T02130201030313112332320111101112011121233313210..0    47        
--
>199_2537_3985_F3	ENSMUST00000113126	+	2592	2623	10	41	50	166	1x4x3T1x2x14x3x3	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                          |X|||X|| |X|X|||||||||||||X||X||
T:               ---------AcCCAgCATCcTgACACCACACCACAcCTcTG---------
R:         10   T23102013300001031323202111011110111202321332221..0    41        
--
>199_2649_4882_F3	ENSMUST00000113126	-	2601	2619	21	39	50	170	13x6	
G:       2619    AAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                     |||||||||||||X|||||
T:               --------------------GGTGTGGTGTGGTgTCAGG-----------
R:         21   T01002013301112320213101111011110131212022223310..2    39        
--
>199_2942_2569_F3	ENSMUST00000113126	+	2591	2622	9	40	50	192	1x5x2x2G2T18	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                         |X||||X|X| || ||||||||||||||||||
T:               --------TaCCCAgCaCGCTTACACCACACCACACCTCT----------
R:          9   T23102010301001332133203111011110111102223023332..3    40        
--
>199_3760_2248_F3	ENSMUST00000113126	-	2601	2631	9	39	50	210	5x3x1x2x15x5	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                         |||||X||XX|X||||||||||||||X||||
T:               --------GGTGTaGAcaGaGGTGTGGTGTGGTGtCAGG-----------
R:          9   T01001013301112223223201111011110112212030200210..0    39        
--
>199_4286_4600_F3	ENSMUST00000113126	+	1260	1284	23	47	50	162	4x1C2T16	
G:       1260    GACGGATGTGCAGTTAGGTATCTCTGGAGACAAAGTAGAGATAGACCCTG    1284      
                                       ||||X || ||||||||||||||||
T:               ----------------------TCTGgCGATAAAGTAGAGATAGACC---
R:         23   T10333131122323203311011221233233002132222332210..1    47        
--
>200_524_1991_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x14x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGG-----------
R:         17   T2330201030300102012320311101111011120201301203231.    39        
--
>200_1694_4892_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	1x2x19	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |X|X||||||||||||||||||
T:               ----------------CaGaGGTGTGGTGTGGTGTCAG------------
R:         17   T0100201330011132022320111101111011121210003020222.    38        
--
>200_1759_2019_F3	ENSMUST00000113126	+	2593	2628	11	46	50	186	6x2x1x2T13x3x2x2x4	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                           ||||||X|XX| |||||||||||||X||X|X|X|||
T:               ----------CCCAGCaCccTTACACCACACCACAcCTcTgTcTAC----
R:         11   T2330201030000123012320311101111011120232313231023.    46        
--
>200_1776_2628_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2310201030000131112320311101111011110222030232031.    40        
--
>200_1886_493_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	3x3x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |||X||X||X|||||||||||||
T:               -------------AGAcAGaGGtGTGGTGTGGTGTC--------------
R:         14   T0310201030303122212320311101111011123222323300213.    36        
--
>200_1949_475_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	1x4x3x14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |X|||X||X|||||||||||||X||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCaGG-----------
R:         15   T2330201030230133112320311101111011120203223221002.    39        
--
>200_2086_620_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T2030201030030132112320311101111011120221302102133.    36        
--
>200_2142_1345_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T2330201030000112112120311101111011120322300313122.    36        
--
>200_2215_2959_F3	ENSMUST00000113126	+	2605	2631	23	49	50	176	16x2x1G3x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                                       ||||||||||||||||X|X |||X|||
T:               ----------------------ACACCACACCACACCTcTgGCTAcACC-
R:         23   T1030201030330132012320311101111011110202303232110.    49        
--
>200_2531_485_F3	ENSMUST00000113126	-	2597	2625	14	42	50	170	2x3x3x8x8x1x4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                              ||X||X||X|||||||X|||||||XX|||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGggTGC--------
R:         14   T1302010303131323123203111011120111212121133213201.    42        
--
>200_2747_692_F3	ENSMUST00000113126	-	2602	2628	11	37	50	176	3C4x3x8x8	
G:       2628    AATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                           ||| ||||X||X|||||||X|||||||
T:               ----------GTACACAGaGGtGTGGTGTgGTGTCAG-------------
R:         11   T3221201030313111123203111011130111212220003111121.    37        
--
>200_2993_4756_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	2x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  ||X||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTC--------------
R:         18   T0100201330311102322320111101111011122030013021200.    36        
--
>200_3128_1760_F3	ENSMUST00000113126	-	2599	2626	14	41	50	180	4x2x3x2x12x5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                              ||||X|X||X|X|||||||||||X||||
T:               -------------AGACaGaGGtGtGGTGTGGTGTCaGGGT---------
R:         14   T2310201030310122132320213101111011120200121130002.    41        
--
>200_3245_143_F3	ENSMUST00000113126	-	2600	2624	16	40	50	210	7x14x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                |||||||X|||||||||||||X|||
T:               ---------------ACAGAGGtGTGGTGTGGTGTCaGGG----------
R:         16   T2330201030033100112220311101111011122200003332101.    40        
--
>200_3393_548_F3	ENSMUST00000113126	-	2596	2625	15	44	50	160	x5x3x12x2x2x3x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               X||||X||X|||||||||||X|X|X||X||
T:               --------------gACAGaGGtGTGGTGTGGTGtCaGgGTgCT------
R:         15   T2310201030300102112320311101111011020230123232022.    44        
--
>200_3393_589_F3	ENSMUST00000113126	+	2604	2622	22	40	50	190	19	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |||||||||||||||||||
T:               ---------------------GACACCACACCACACCTCT----------
R:         22   T2310201233020133022300211101111011110222302202211.    40        
--
>200_3839_2301_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T3230201030100132212320311101111011120232322101133.    36        
--
>200_3980_884_F3	ENSMUST00000113126	+	2605	2625	23	43	50	190	18x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       ||||||||||||||||||X||
T:               ----------------------ACACCACACCACACCTCTgTC-------
R:         23   T3230203032100300032320311101111011110222212333222.    43        
--
>200_3990_3137_F3	ENSMUST00000113126	-	2600	2626	14	40	50	170	1x2x3x3x14x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              |X|X||X||X|||||||||||||X|||
T:               -------------AgAcAGaGGtGTGGTGTGGTGTCaGGG----------
R:         14   T2330201030100002012320311101111011120200220103132.    40        
--
>201_756_1742_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	3x15x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||X||||||||||||||X||
T:               ------------------AGGtGTGGTGTGGTGTCAgGG-----------
R:         19   T0312010303131023123203111011110111210003102.2000..    39        
--
>201_879_3168_F3	ENSMUST00000113126	+	2594	2622	12	40	50	176	3x4x1x2T11x7	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||X|||XX| |||||||||||X||||||
T:               -----------CCAgCACccTTACACCACACCAcACCTCT----------
R:         12   T2310201030020133112320311101111012110222202.3230..    40        
--
>201_1165_1464_F3	ENSMUST00000113126	-	2755	2775	18	38	50	170	2x4x15	
G:       2775    GACGCAGGGCTACATATCAAAGAAGCACACTTGACTCTCATCGAGCTGGG    2755      
                                  ||X|||X||||||||||||||
T:               -----------------CAaAGAaGCACACTTGACTCT------------
R:         18   T2202201030321112311302212311112012122222003.2313..    38        
--
>201_1192_1753_F3	ENSMUST00000113126	+	2599	2620	17	38	50	160	2x1x2x17	
G:       2599    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                 ||XX|X||||||||||||||||
T:               ----------------ACccTgACACCACACCACACCT------------
R:         17   T2310201030010323011320211101111011110232232.2203..    38        
--
>201_1483_2482_F3	ENSMUST00000113126	-	2601	2620	20	39	50	160	3x14x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||X|||||||||||||X||
T:               -------------------AGGtGTGGTGTGGTGTCaGG-----------
R:         20   T2210201030030100232320311101111011120203011.1203..    39        
--
>201_1609_3650_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x12x2x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||X|X||||
T:               ----------------CAGaGGtGTGGTGTGGTGtCaGGGT---------
R:         17   T1030201030310122312320311101111011320200101.0232..    41        
--
>201_2007_1448_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	2x3x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||||||||||||||||
T:               --------------GAcAGaGGTGTGGTGTGGTGTC--------------
R:         15   T2310201030320112012320111101111011120222003.2210..    36        
--
>201_2128_2515_F3	ENSMUST00000113126	+	2589	2621	7	39	50	176	2x1x5x1x3x1x2T17	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                       ||XX||||XX||XX| |||||||||||||||||
T:               ------GGtaCCCAgcACccTTACACCACACCACACCTC-----------
R:          7   T2330201030100130112320311101111011110221102.0030..    39        
--
>201_2141_867_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x14x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGG-----------
R:         17   T3330201030100310212320311101111011120202300.2321..    39        
--
>201_2441_2416_F3	ENSMUST00000113126	+	2593	2621	11	39	50	196	4x4x1x2T17	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                           ||||X|||XX| |||||||||||||||||
T:               ----------CCCAgCACccTTACACCACACCACACCTC-----------
R:         11   T2330201030000133112320311101111011110221332.2201..    39        
--
>201_2628_1027_F3	ENSMUST00000113126	-	2599	2620	20	41	50	180	3x14x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                    |||X|||||||||||||X||||
T:               -------------------AGGtGTGGTGTGGTGTCaGGGT---------
R:         20   T2310201030110133212320311101111011120200102.3321..    41        
--
>201_2662_3179_F3	ENSMUST00000113126	-	2604	2624	23	43	50	170	1x6x14	
G:       2624    AAGAAAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAA    2604      
                                       |X|||||X|||||||||||||
T:               ----------------------AcAGAGGtGTGGTGTGGTGTC-------
R:         23   T2301123233020103001311331222031110111101112.2233..    43        
--
>201_2750_451_F3	ENSMUST00000113126	+	2605	2620	23	38	50	160	16	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                       ||||||||||||||||
T:               ----------------------ACACCACACCACACCT------------
R:         23   T2310201332120103032320311101111011110202030.3210..    38        
--
>201_2820_338_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T2330201030010133012320311101111011120132003.1201..    36        
--
>201_3023_958_F3	ENSMUST00000113126	-	2604	2631	9	36	50	166	x3T2x5x3x14	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                         X|| ||X||||X||X|||||||||||||
T:               --------gGTTTAgACAGaGGtGTGGTGTGGTGTC--------------
R:          9   T2330201030100302112320311101111011120333200.0223..    36        
--
>201_3148_219_F3	ENSMUST00000113126	-	2599	2623	16	40	50	170	3x1x2x10x9	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                |||XX|X|||||||||X||||||||
T:               ---------------CAGagGtGTGGTGTGGtGTCAGGGT----------
R:         16   T2112010303131123123003111011110211212001300.3203..    40        
--
>201_3150_1497_F3	ENSMUST00000113126	+	2602	2628	20	46	50	186	2x9x11G4	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                    ||X||||||||X|||||||||| ||||
T:               -------------------CTgACACCACAcCACACCTCTGGCTAC----
R:         20   T2330201032100100032322211101113011110222103.2130..    46        
--
>201_3167_2455_F3	ENSMUST00000113126	+	2597	2621	15	39	50	196	3x1G20	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                               |||X ||||||||||||||||||||
T:               --------------GCAcGCTGACACCACACCACACCTC-----------
R:         15   T2330201032231103133321211101111011110223001.0333..    39        
--
>201_3292_4115_F3	ENSMUST00000113126	-	2601	2627	13	39	50	190	2x5x3x12x5	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                             ||X||||X||X|||||||||||X||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGtCAGG-----------
R:         13   T2110201030103312112320311101111011221203303.2213..    39        
--
>201_3622_1574_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T0213020103031311231232011110111201112132303.2200..    38        
--
>201_3656_2064_F3	ENSMUST00000113126	+	758	782	13	37	50	190	7x13x1x4	
G:        758    TATTGCTGAGGATGATGGGGAGGTCGACACGGATTTTCCGCCACTGGATT    782       
                             |||||||X||||||||||||XX|||
T:               ------------TGATGGGgAGGTCGACACGGatTTT-------------
R:         13   T3033303101120123100322012321113011000332102.3222..    37        
--
>201_3989_2426_F3	ENSMUST00000113126	+	2604	2630	22	48	50	172	1x18T3G3	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                      |X||||||||||||||||| ||| |||
T:               ---------------------GaCACCACACCACACCTCTTTCTGCAC--
R:         22   T2030031123030301222320311101111011110222002.0311..    48        
--
>201_4152_1282_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2310201030030131112320311101111011120023312.3023..    36        
--
>201_4188_2612_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030311332112320311101111011120333220.2331..    36        
--
>202_353_2382_F3	ENSMUST00000113126	-	2597	2627	14	44	50	176	2x2T2x11x8x2x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                              ||X| ||X||||||||||X|||||||X|X||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAGgGtGC------
R:         14   T02330201030310312332320111101112011121230013331223    44        
--
>202_1278_349_F3	ENSMUST00000113126	-	723	754	1	32	50	180	x4x4x6x11x1x3x3	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    723       
                 X|||X|||X|||||X||||||||||XX||X||
T:               tCAGcAATaTGCAGgCAGTAGGCACtgACaTT------------------
R:          1   T12120103031312231213203113221330333303203100323333    32        
--
>202_1652_409_F3	ENSMUST00000113126	-	2592	2625	14	47	50	180	2x3x3x8x2x6x5x1x4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2592      
                              ||X||X||X|||||||X|X|||||X||||XX|||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGgGTGCtgGGT---
R:         14   T13200103031313231232031110111202112122011313001011    47        
--
>202_1747_2182_F3	ENSMUST00000113126	+	2598	2626	16	44	50	162	x3G2T15x2x5	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                X|| || |||||||||||||||X|X||||
T:               ---------------cACGCTTACACCACACCACACCtCtGTCT------
R:         16   T13311010303000001133203111011110111103231122230132    44        
--
>202_2012_2299_F3	ENSMUST00000113126	-	2595	2623	18	46	50	176	3x3x10x6x3A3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                  |||X||X|||||||||X|||||X|| |||
T:               -----------------CAGaGGtGTGGTGTGGtGTCAGgGTACTG----
R:         18   T00030201030013110312320311101111021121220131212310    46        
--
>202_2062_867_F3	ENSMUST00000113126	-	2600	2625	16	41	50	200	2x14x1x9	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X|||||||||||||XX||||||||
T:               ---------------GAcAGAGGTGTGGTGTggTGTCAGGG---------
R:         16   T02330201030313312312220111101112111121200033321232    41        
--
>202_2101_531_F3	ENSMUST00000113126	-	2603	2629	12	38	50	170	2x2x2x3x8x10	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                            ||X|X|X||X|||||||X|||||||||
T:               -----------TGtAgAcAGaGGTGTGGtGTGGTGTCA------------
R:         12   T31230201030313312212320111103111011121021023122232    38        
--
>202_2851_1986_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030313112212320111101112011121223321302113    39        
--
>202_2887_2416_F3	ENSMUST00000113126	+	2602	2621	20	39	50	160	3x3x14	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    |||X||X|||||||||||||
T:               -------------------CTGaCAcCACACCACACCTC-----------
R:         20   T23302010300133023123213113011110111102230331320220    39        
--
>202_2897_2783_F3	ENSMUST00000113126	-	2603	2625	14	36	50	190	2x3x18	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                              ||X||X|||||||||||||||||
T:               -------------GAcAGaGGTGTGGTGTGGTGTCA--------------
R:         14   T13020103031313231232011110111101112100330102312203    36        
--
>202_3099_1727_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02130201030313112312320111101112011121320323302302    38        
--
>202_3950_1099_F3	ENSMUST00000113126	-	2597	2622	18	43	50	180	2x3x14x4x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                  ||X||X|||||||||||||X|||X||
T:               -----------------AGaGGtGTGGTGTGGTGTCaGGGtGC-------
R:         18   T23332010300001022323203111011110111202000133112303    43        
--
>203_803_1128_F3	ENSMUST00000113126	+	2317	2349	12	44	50	182	2x1x2C3x5A5x13	
G:       2317    GAGACAGGTGCTGGTAATATAGTGTGACAGTGTCTCCAAGTGGTGCTGAG    2349      
                            ||XX| |||X|||| |||||X||||||||||||
T:               -----------TGgtACTATaGTGTAACAGTgTCTCCAAGTGGT------
R:         12   T010020130313112312332211130112101222010211013.232.    44        
--
>203_1261_3211_F3	ENSMUST00000113126	+	2600	2625	18	43	50	180	2x16x2x1x5	
G:       2600    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                  ||X|||||||||||||||X|XX||||
T:               -----------------CCcTGACACCACACCACAcCtcTGTC-------
R:         18   T331220103001011303032121110111101112030211203.011.    43        
--
>203_1557_1827_F3	ENSMUST00000113126	+	2602	2626	20	44	50	176	2x16G2x4	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                    ||X||||||||||||||| ||X|||
T:               -------------------CTgACACCACACCACACCGCTgTCT------
R:         20   T231020103002011203232321110111101111033221221.302.    44        
--
>203_1590_713_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x12x2x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||X|X||||
T:               ----------------CAGaGGtGTGGTGTGGTGtCaGGGT---------
R:         17   T233020103013012101232031110111101102020010333.212.    41        
--
>203_2017_3038_F3	ENSMUST00000113126	-	2597	2623	17	43	50	170	x3x3x14x4x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                 X||X||X|||||||||||||X|||X||
T:               ----------------cAGaGGtGTGGTGTGGTGTCaGGGtGC-------
R:         17   T231020103000013201232031110111101112020001332.312.    43        
--
>203_2035_594_F3	ENSMUST00000113126	+	2593	2629	11	47	50	166	4x1x1x2x1x2T13x6x2x4	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                           ||||XXX|XX| |||||||||||||X|||||X|X|||
T:               ----------CCCAgcaCccTTACACCACACCACAcCTCTGtCtACA---
R:         11   T031011103020013001232031110111101113022210213.102.    47        
--
>203_2120_4489_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T021302010303133123123201111011120111211022333.120.    38        
--
>203_2499_2861_F3	ENSMUST00000113126	-	2597	2620	20	43	50	180	16x1x4x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    ||||||||||||||||XX|||X||
T:               -------------------AGGTGTGGTGTGGTGTcaGGGtGC-------
R:         20   T010020133030113202232011110111101111020031302.012.    43        
--
>203_3588_1168_F3	ENSMUST00000113126	+	2607	2626	30	49	50	170	1x19	
G:       2607    AGAAAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTA    2626      
                                              |X||||||||||||||||||
T:               -----------------------------AcCACACCACACCTCTGTCT-
R:         30   T101303223303202020303031100023001111011110222.122.    49        
--
>204_238_3233_F3	ENSMUST00000113126	-	2598	2620	21	43	50	190	11x6x6	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                     |||||||||||X|||||X|||||
T:               --------------------AGGTGTGGTGTgGTGTCaGGGTG-------
R:         21   T0233020113031011223232011110111201112320011112032.    43        
--
>204_449_1815_F3	ENSMUST00000113126	+	2589	2620	7	38	50	186	2x3G6x2x12x2x4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                       ||X|| ||||||X|X|||||||||||X|X|||
T:               ------GGtACGCAGCACcCtGACACCACACCaCaCCT------------
R:          7   T2311110003133123112031211101111031210203303323133.    38        
--
>204_1750_2336_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T0233020103031011233232011110111201112020031132233.    41        
--
>204_1779_2243_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T2332201030010103112320311101111011120222003323302.    36        
--
>204_2220_4557_F3	ENSMUST00000113126	+	2589	2625	7	43	50	162	2x1x5T3x1x2T12x4x2x3	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                       ||XX|||| |||XX| ||||||||||||X|||X|X||
T:               ------GGtaCCCATCACccTTACACCACACCACaCCTcTgTC-------
R:          7   T1030201030100132112320311101111011310232012011232.    43        
--
>204_2225_3505_F3	ENSMUST00000113126	-	721	754	1	34	50	180	1x3x4x6x10x1x1x1x7	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    721       
                 |X||X|||X|||||X|||||||||XXXX||||||
T:               TcAGcAATaTGCAGgCAGTAGGCActgaCATTGT----------------
R:          1   T0312010303131233121320313101113011110231002333202.    34        
--
>204_2772_2554_F3	ENSMUST00000113126	-	2596	2627	14	45	50	200	2x2x3x11x6x4x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X|X||X||||||||||X|||||X|||X|||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCaGGGtGCT-----
R:         14   T0233020103031031231232011110111201112020031320233.    45        
--
>204_2773_2551_F3	ENSMUST00000113126	-	2596	2623	18	45	50	180	x3x11x7x3x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  X||X||||||||||X||||||X||X|||
T:               -----------------cAGaGGTGTGGTGTgGTGTCAgGGtGCT-----
R:         18   T0233020103031321231232011110111201112100021320312.    45        
--
>204_3793_3629_F3	ENSMUST00000113126	+	2601	2631	19	49	50	176	1x3x15x3x1x4G3	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                                   |X||X||||||||||||||X||XX||| |||
T:               ------------------CcTGaCACCACACCACACCtCTgtCTAGACC-
R:         19   T2333201330030332032321311101111011110122022232210.    49        
--
>204_4266_1115_F3	ENSMUST00000113126	-	2068	2099	9	40	50	160	1x3x5x1x2x9x2x6x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X||||||||X|X|||||X||
T:               --------CtGAgAGCTccAaCCACAGCTtTtGTAATcTG----------
R:          9   T0013303111123223203111011123230211303321133231131.    40        
--
>205_207_987_F3	ENSMUST00000113126	-	2080	2113	10	43	50	160	2x4x1x1x2x2x3x9x2x8	
G:       2113    AATGCTGCTCCTAAACATTGCTTCTGAGAGCTCCAACCACAGCAGGTCAC    2080      
                          ||X|||XXX|X|X||X||||||||X|X|||||||
T:               ---------CCtAAAcatTgCtTCtGAGAGCTCcAaCCACAGC-------
R:         10   T0103222002033002010330021122223223111011123.2321..    43        
--
>205_323_147_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	3x3x12x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGtCAG------------
R:         17   T1030201030323122312320311101111011321233303.0222..    38        
--
>205_460_3922_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T3233101030322132111320111101111011120231302.2323..    36        
--
>205_914_1882_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T2332201030030110112320311101111011120310003.0323..    36        
--
>205_933_658_F3	ENSMUST00000113126	-	2599	2623	17	41	50	176	3x3x14C4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X||||||||||||| ||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCCGGGT---------
R:         17   T2331201030133102312320311101111011120300131.1222..    41        
--
>205_1007_1613_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	1x7x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X||||||X|||||||||||||
T:               --------------GaCAGAGGtGTGGTGTGGTGTC--------------
R:         15   T2310201030000103112220311101111011120023303.2020..    36        
--
>205_1273_3146_F3	ENSMUST00000113126	-	2597	2631	8	42	50	182	2x2C3x3x15x3x2C3	
G:       2631    AATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                        ||X| |||X||X||||||||||||||X||X| |||
T:               -------GGtGCAGAcAGaGGTGTGGTGTGGTGtCAgGCTGC--------
R:          8   T2333210303131223123201111011110110210032131.3203..    42        
--
>205_1287_4050_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	10x8	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||X|||||||
T:               ----------------------ACACCACACCaCACCTCT----------
R:         23   T1003201030133122012320311101111001110222313.2113..    40        
--
>205_1290_1563_F3	ENSMUST00000113126	-	2596	2623	18	45	50	170	1x2x11x8x2x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |X|X||||||||||X|||||||X|X|||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAGgGtGCT-----
R:         18   T0213020103031010233232011110111201112123021.0220..    45        
--
>205_1729_1809_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T3331201030230123112320311101111011120320102.2220..    36        
--
>205_1798_3929_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	1x6x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             |X|||||X||X|||||||||||||
T:               ------------TaGACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T2332201030000122112320311101111011120222302.0122..    36        
--
>205_1938_2510_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	3x3x14x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGG----------
R:         17   T2330201030100133012320311101111011120200310.3223..    40        
--
>205_2011_1329_F3	ENSMUST00000113126	+	2601	2621	19	39	50	170	1x2x18	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                   |X|X|||||||||||||||||
T:               ------------------CcTgACACCACACCACACCTC-----------
R:         19   T0312020303030311231320211101111011110220010.3031..    39        
--
>205_2078_1870_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T3133020103031011201232011110111201112122032.3002..    39        
--
>205_2088_3318_F3	ENSMUST00000113126	+	2604	2627	22	45	50	170	1x12x4x7	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      |X|||||||||||X|||X||||||
T:               ---------------------GaCACCACACCACaCCTcTGTCTA-----
R:         22   T2232201030030100012320311101111011310232112.1323..    45        
--
>205_2109_2629_F3	ENSMUST00000113126	-	2603	2627	14	38	50	190	2x5x11x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X||||X||||||||||X||||||
T:               -------------TAgACAGaGGTGTGGTGTgGTGTCA------------
R:         14   T0103020103031031211232011110111201112132311.3330..    38        
--
>205_2429_2416_F3	ENSMUST00000113126	-	2601	2628	16	43	50	160	3x2x3x3x8x2x7	
G:       2628    AAAGAAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAA    2601      
                                |||X|X||X||X|||||||X|X||||||
T:               ---------------GTAgAcAGaGGtGTGGTGTgGtGTCAGG-------
R:         16   T1112323302010303130231232031110111202112120.1212..    43        
--
>205_2494_1087_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T2330201030100133012320311101111011120320102.2330..    36        
--
>205_2584_3516_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	1x6x3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             |X|||||X||X||||||||||||
T:               ------------TaGACAGaGGtGTGGTGTGGTGT---------------
R:         13   T2310201030330122112320311101111011110232031.1113..    35        
--
>205_3649_4993_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	16x2x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       ||||||||||||||||X|X||
T:               ----------------------ACACCACACCACACCTcTgTC-------
R:         23   T0230010233131023023320311101111011110232312.3322..    43        
--
>205_3696_1035_F3	ENSMUST00000113126	-	2605	2629	11	35	50	170	x6x3x3x13	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                           X|||||X||X||X||||||||||||
T:               ----------tGTAGAcAGaGGtGTGGTGTGGTGT---------------
R:         11   T2330201032311322012320311101111011132313100.0023..    35        
--
>206_910_3716_F3	ENSMUST00000113126	-	2600	2617	26	43	50	180	18	
G:       2617    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                          ||||||||||||||||||
T:               -------------------------TGTGGTGTGGTGTCAGGG-------
R:         26   T3302330201030013103312320311101111011121200.322...    43        
--
>206_1303_1553_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	11x6x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||||||||||X|||||X|||
T:               ------------------AGGTGTGGTGTgGTGTCaGGG-----------
R:         19   T1302010303131023123201111011120111202000330.313...    39        
--
>206_1348_3521_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T0330203030313332312320311101111011120230330.211...    36        
--
>206_1432_2026_F3	ENSMUST00000113126	-	2602	2623	18	39	50	160	1x2x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |X|X||||||||||X|||||||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T0233020103031011203232011110111201112121033.221...    39        
--
>206_1475_3535_F3	ENSMUST00000113126	-	2601	2629	11	39	50	170	2x2x2x3x3x14x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                           ||X|X|X||X||X|||||||||||||X||
T:               ----------TGtAgAcAGaGGtGTGGTGTGGTGTCaGG-----------
R:         11   T2310201030010302012320311101111011120203012.203...    39        
--
>206_1519_3183_F3	ENSMUST00000113126	+	2601	2627	14	40	50	190	1x2x3x1x20	
G:       2601    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2627      
                              |X|X||XX|||||||||||||||||||
T:               -------------CcTgACacCACACCACACCTCTGTCTA----------
R:         14   T0100201330121222021320111101111022211223032.033...    40        
--
>206_1615_4800_F3	ENSMUST00000113126	-	2075	2095	12	32	50	170	5x13x3	
G:       2095    TCTCCCTTATCGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTTG    2075      
                            |||||X||||||||||||X||
T:               -----------GAGCTcCAACCACAGCTTtTG------------------
R:         12   T0103030111232232001010111232020133210010313.120...    32        
--
>206_1822_4739_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T0233020103031011233232011110111201112020033.300...    41        
--
>206_1828_3899_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	5x2x1x14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X|XX|||||||||||||X||
T:               --------------GACAGaGgtGTGGTGTGGTGTCaGG-----------
R:         15   T3320201030310102112321311101111011120202333.210...    39        
--
>206_2349_1684_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	11x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||X||||||
T:               ----------------------ACACCACACCAcACCTCT----------
R:         23   T0310201030030100032320311101111012110222013.200...    40        
--
>206_2357_2511_F3	ENSMUST00000113126	+	2592	2620	10	38	50	176	x7x2x1x2T16	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                          X||||||X|XX| ||||||||||||||||
T:               ---------aCCCAGCaCccTTACACCACACCACACCT------------
R:         10   T3310201330100123012320311101111011110230013.122...    38        
--
>206_2804_2300_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x3x8x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||X|||||||X|||||||||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGGG---------
R:         18   T0233020103031311231232031110111201112120031.102...    41        
--
>206_2984_2310_F3	ENSMUST00000113126	-	2595	2620	21	46	50	176	11x6x4C4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X|||||X||| ||||
T:               --------------------AGGTGTGGTGTgGTGTCaGGGCGCTG----
R:         21   T0233020103031011233232011110111201112020033.212...    46        
--
>206_3086_2328_F3	ENSMUST00000113126	-	2600	2620	21	41	50	190	11x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGGG---------
R:         21   T0213020103031011231232011110111201112120021.301...    41        
--
>206_3216_2319_F3	ENSMUST00000113126	+	2604	2623	22	41	50	160	1x13x6	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                      |X||||||||||||X|||||
T:               ---------------------GaCACCACACCACAcCTCTG---------
R:         22   T2330201030030100011320311101111011130222103.222...    41        
--
>206_3287_2597_F3	ENSMUST00000113126	+	2585	2619	3	37	50	182	2x5x3G1x1x3x15T3	
G:       2585    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                   ||X||||X|| |XX||X|||||||||||||| |||
T:               --GCaAGGTaCCGAgcACcCTGACACCACACCATACC-------------
R:          3   T3313302010103231113021211101111013310011003.033...    37        
--
>206_3400_2631_F3	ENSMUST00000113126	-	2594	2626	14	46	50	192	5T3x3x13x2A5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                              ||||| |||X||X||||||||||||X| |||||
T:               -------------AGACATAGGtGTgGTGTGGTGTCAGgGAGCTGG----
R:         14   T1030201031230122113320311301111011121230223.201...    46        
--
>206_3567_732_F3	ENSMUST00000113126	+	2593	2616	11	34	50	160	2x6x1x2x13	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                           ||X|||||XX|X||||||||||||
T:               ----------CCcAGCACccTgACACCACACCAC----------------
R:         11   T2330201030003123112322211101111011023220000.110...    34        
--
>206_3572_3326_F3	ENSMUST00000113126	-	2607	2631	9	33	50	176	5G2x6x11	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTACTGTTTGAAAAAAAAT    2607      
                         ||||| ||X|||||X||||||||||
T:               --------GGTGTGGAcAGAGGtGTGGTGTGGT-----------------
R:          9   T2333201030111102012220311101111013220033312.103...    33        
--
>206_3843_1944_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T3133020103031331201232011110111201112123022.023...    39        
--
>206_3925_1201_F3	ENSMUST00000113126	+	2590	2622	8	40	50	176	1x3x2x4x2x2T13x5	
G:       2590    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                        |X||X|X|||X|X| |||||||||||||X||||
T:               -------GtACcCaGCAcCcTTACACCACACCACAcCTCT----------
R:          8   T3002201303130223130320311101111011130222313.110...    40        
--
>207_783_843_F3	ENSMUST00000113126	-	2600	2620	23	43	50	170	3x8x10	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                       |||X|||||||X|||||||||
T:               ----------------------AGGtGTGGTGTgGTGTCAGGG-------
R:         23   T1202330201030023101312320311101112011121200.312...    43        
--
>207_1364_1921_F3	ENSMUST00000113126	+	2593	2619	11	37	50	170	1x7x1x2x11x5	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                           |X||||||XX|X||||||||||X||||
T:               ----------CcCAGCACccTgACACCACACCaCACC-------------
R:         11   T2310201032010123111320211101111021110101302.022...    37        
--
>207_1423_1203_F3	ENSMUST00000113126	-	2602	2620	20	38	50	190	19	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCAG------------
R:         20   T0102201330011112323320111101111011121223303.231...    38        
--
>207_1523_810_F3	ENSMUST00000113126	+	2601	2621	19	39	50	170	1x2x18	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                   |X|X|||||||||||||||||
T:               ------------------CcTgACACCACACCACACCTC-----------
R:         19   T1330201030030112332320211101111011110220202.112...    39        
--
>207_1563_4062_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T1030201030331112312320311101111011120230012.312...    36        
--
>207_1718_198_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T0213020103031011231232011110111201112020021.220...    41        
--
>207_1731_2054_F3	ENSMUST00000113126	-	2593	2624	16	47	50	210	2x2x3x14x1x10	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                ||X|X||X|||||||||||||XX|||||||||
T:               ---------------ACaGaGGtGTGGTGTGGTGTCagGGTGCTGGG---
R:         16   T3310201030100030122320211101111011120000113.300...    47        
--
>207_1811_910_F3	ENSMUST00000113126	-	2597	2620	20	43	50	160	3x14x2x2x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X|||||||||||||X|X|X||
T:               -------------------AGGtGTGGTGTGGTGTCaGgGtGC-------
R:         20   T3320201030303332312320311101111011120230313.230...    43        
--
>207_1938_1144_F3	ENSMUST00000113126	-	2599	2627	14	42	50	170	2x2x3x3x8x2x9	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                              ||X|X||X||X|||||||X|X||||||||
T:               -------------TAgAcAGaGGtGTGGTGTgGtGTCAGGGT--------
R:         14   T2320001003031331201232031110111202112120012.322...    42        
--
>207_2298_1211_F3	ENSMUST00000113126	-	2602	2625	17	40	50	160	2x5x1x10x6	
G:       2625    AGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAA    2602      
                                 ||X||||XX|||||||||X|||||
T:               ----------------GAcAGAGgtGTGGTGTGGtGTCAG----------
R:         17   T3123302010300331023122233111011110211212333.322...    40        
--
>207_2421_2316_F3	ENSMUST00000113126	+	2594	2622	12	40	50	176	5x2x1x2T12x6	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||||X|XX| ||||||||||||X|||||
T:               -----------CCAGCaCccTTACACCACACCACaCCTCT----------
R:         12   T2330201032130123012320311101111011010222302.021...    40        
--
>207_2798_295_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T1310201330100100212320311101111011120323103.130...    36        
--
>207_3698_69_F3	ENSMUST00000113126	-	2601	2623	18	40	50	170	3x11x5x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  |||X||||||||||X||||X|||
T:               -----------------CAGaGGTGTGGTGTgGTGTcAGG----------
R:         18   T3133020103031311231212011110111201113120200.232...    40        
--
>207_3751_481_F3	ENSMUST00000113126	-	2595	2620	20	45	50	170	3x12x5x1x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                    |||X|||||||||||X||||XX||||
T:               -------------------AGGtGTGGTGTGGTGtCAGGgtGCTG-----
R:         20   T2110201030323123312320311101111011321203013.322...    45        
--
>207_3871_3509_F3	ENSMUST00000113126	-	2598	2620	20	42	50	170	14x1x5x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                    ||||||||||||||XX||||X||
T:               -------------------AGGTGTGGTGTGGTgtCAGGgTG--------
R:         20   T0100131330331132322320111101111012321203112.122...    42        
--
>207_4002_2117_F3	ENSMUST00000113126	-	719	753	2	36	50	176	1x2x4x6x10x1x1C3x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X|||||X|||||||||XX |||X|||||
T:               -CaGcAATaTGCAGgCAGTAGGCActCACAtTGTCA--------------
R:          2   T3102010303131223121320313121111011212220211.030...    36        
--
>208_432_2402_F3	ENSMUST00000113126	-	2601	2623	16	38	50	170	x3x11x9	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                X||X||||||||||X||||||||
T:               ---------------cAGaGGTGTGGTGTgGTGTCAGG------------
R:         16   T1133201033131023123201111011130111212023313231213.    38        
--
>208_715_2325_F3	ENSMUST00000113126	-	2598	2623	18	43	50	180	3x11x6x2x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                  |||X||||||||||X|||||X|X|||
T:               -----------------CAGaGGTGTGGTGTgGTGTCaGgGTG-------
R:         18   T0233020103031031221232011110111201112021011233021.    43        
--
>208_733_303_F3	ENSMUST00000113126	-	2597	2626	11	40	50	152	1x2T2x3x12x4C4	
G:       2626    TTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                           |X| ||X||X|||||||||||X||| ||||
T:               ----------AgATAGaGGtGTGGTGTGGTGtCAGCGTGC----------
R:         11   T2201030213112332020311101111011321233113323313001.    40        
--
>208_1138_4851_F3	ENSMUST00000113126	-	2065	2099	9	43	50	170	1x3x5x1x2x8x8x2x1x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                         |X||X||||XX|X|||||||X|||||||X|XX|||
T:               --------CtGAgAGCTccAaCCACAGCtTTTGTAAtCtgCCT-------
R:          9   T0013303111123223201111011123300011301232302201233.    43        
--
>208_1401_2371_F3	ENSMUST00000113126	-	2593	2620	21	48	50	180	11x8x2x2x2x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                     |||||||||||X|||||||X|X|X|X||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGtGcTgGG--
R:         21   T0323020103031011233232011110111201112121031120003.    48        
--
>208_1856_4007_F3	ENSMUST00000113126	+	2594	2621	12	39	50	180	3x4x1x2x14x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            |||X|||XX|X|||||||||||||X|||
T:               -----------CCAgCACccTgACACCACACCACAcCTC-----------
R:         12   T2000301032030103112320211101111011120220310122212.    39        
--
>208_2220_540_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T0213020103031031233232011110111201112123023302212.    39        
--
>208_2329_1269_F3	ENSMUST00000113126	-	2596	2627	14	45	50	186	2x2x3x11x6C1x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X|X||X||||||||||X||||| |X|||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCCGgGTGCT-----
R:         14   T0233020103031031231232011110111201112032011320231.    45        
--
>208_2470_2444_F3	ENSMUST00000113126	-	2599	2629	9	39	50	170	4x2x4x2x12x1x2x4	
G:       2629    ATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCC    2599      
                         ||||X|X|||X|X|||||||||||XX|X|||
T:               --------TGTAgAcAGAgGtGTGGTGTGGTGtcAgGGT-----------
R:          9   T1022113201131231223031110111101100100013303200223.    39        
--
>208_2799_475_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	3x3x12x6	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||X|||||
T:               ----------------CAGaGGtGTGGTGTGGTGtCAGGG----------
R:         17   T2310201030030133012320311101111011021200303222100.    40        
--
>208_3350_642_F3	ENSMUST00000113126	-	2599	2625	15	41	50	170	1x4x3x12x2x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               |X|||X||X|||||||||||X|X||||
T:               --------------GaCAGaGGtGTGGTGTGGTGtCaGGGT---------
R:         15   T3310201330130100112320311101111011220200130213131.    41        
--
>208_4121_626_F3	ENSMUST00000113126	+	2628	2655	11	38	50	166	1x2x14C2x2x6	
G:       2628    CCTCTGTCTACACCAGATGCCTCTGCAGACCTCACCATGGTCCCGCCTGT    2655      
                           |X|X||||||||||||| ||X|X|||||
T:               ----------CaCcAGATGCCTCTGCACACcTcACCAT------------
R:         11   T0233020103031312231302221311111211101333000322211.    38        
--
>209_373_4489_F3	ENSMUST00000113126	+	2326	2346	23	43	50	170	5x1x15	
G:       2326    GAGAGACAGGTGCTGGTAATATAGTGTGACAGTGTCTCCAAGTGGTGCTG    2346      
                                       |||||XX||||||||||||||
T:               ----------------------AGTGTgaCAGTGTCTCCAAGT-------
R:         23   T130302010303100123323202111331121112220102122101.0    43        
--
>209_2015_1058_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x7x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X||||||X||
T:               --------------------AGGTGTGGTGTgGTGTCAgGG---------
R:         21   T021302010303103123323201111011120111213002031122.3    41        
--
>209_2566_3084_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T101333023302010003032031110111101111022112013231.3    39        
--
>209_3026_3815_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x12x7	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X|||||||||||X||||||
T:               ------------------AGaGGTGTGGTGTGgTGTCAG-----------
R:         19   T133302010303133123323201111011113111212303033312.2    39        
--
>210_464_4511_F3	ENSMUST00000113126	-	2595	2620	21	46	50	180	11x8x2x2x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X|||||||X|X|X||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGtGcTG----
R:         21   T02030201130310312332320111101112011121230210211.2.    46        
--
>210_558_4944_F3	ENSMUST00000113126	+	2595	2626	13	44	50	200	2x3x2x2x14x6x3	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                             ||X||X|X|X|||||||||||||X|||||X||
T:               ------------CAgCAcCcTgACACCACACCACAcCTCTGtCT------
R:         13   T13020103031311031203202111011110111202221022113.3.    44        
--
>211_579_2854_F3	ENSMUST00000113126	-	2602	2636	3	37	50	162	3x1C2x2C3x3x3x12x4	
G:       2636    AACATCTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                   |||X ||X| |||X||X||X|||||||||||X|||
T:               --CATcCGGtGCAGAcAGaGGtGTGGTGTGGTGtCAG-------------
R:          3   T1301310303131223123203111011110110212130023.330...    37        
--
>211_2770_642_F3	ENSMUST00000113126	-	2229	2263	11	45	50	180	4x1x2x3x2x11x1x2x9	
G:       2263    TATTGCTGAGTACGCACGCACGCACGCACGCACGCACGCACCCACGGATT    2229      
                           ||||XX|X||X|X||||||||||XX|X||||||||
T:               ----------TACGcaCgCAcGcACGCACGCACgcAcGCACCCAC-----
R:         11   T1302010303131323123123111331133111213331100.023...    45        
--
>211_3350_1581_F3	ENSMUST00000113126	-	2600	2631	5	36	50	180	2x3x1x3x2x11x2x8	
G:       2631    TCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCCT    2600      
                     ||X||XX||X|X||||||||||X|X|||||||
T:               ----GGtGTagACaGaGGTGTGGTGTgGtGTCAGGG--------------
R:          5   T0013303111121223201111011120011212000023021.111...    36        
--
>211_3666_4177_F3	ENSMUST00000113126	-	2601	2627	14	40	50	156	2x2T2x11x2x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                              ||X| ||X||||||||||X|X||||||
T:               -------------TAgATAGaGGTGTGGTGTgGtGTCAGG----------
R:         14   T1333020103031031233232011110111203112120303.302...    40        
--
>211_3845_204_F3	ENSMUST00000113126	-	2601	2626	14	39	50	160	3x3x3x10x2x5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                              |||X||X||X|||||||||X|X||||
T:               -------------AGAcAGaGGtGTGGTGTGGtGtCAGG-----------
R:         14   T2330203230132122012320311101111001021203000.012...    39        
--
>212_880_1977_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	3x3x11x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X||||||||||X||||
T:               ----------------CAGaGGtGTGGTGTGGTgTCAG------------
R:         17   T2330201210303132012320311101111012121233002.0303..    38        
--
>212_1146_807_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	x6x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 X|||||X||||||||||||||
T:               ----------------cAGAGGtGTGGTGTGGTGTCA-------------
R:         17   T1012201030302102312220011101111011121122302.2221..    37        
--
>212_1446_3558_F3	ENSMUST00000113126	-	2589	2614	17	42	50	180	11x6x2x1x6	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCCCTCAAAG    2589      
                                 |||||||||||X|||||X|XX|||||
T:               ----------------GGTGTGGTGTCaGGGTGcTggGTACC--------
R:         17   T0013313111121223201111011123200110221013103.1120..    42        
--
>212_1454_1617_F3	ENSMUST00000113126	+	2631	2655	15	39	50	170	5x4x3x2x11	
G:       2631    ACCTCTGTCTACACCAGATGCCTCTGCAGACCTCACCATGGTCCCGCCTG    2655      
                               |||||X|||X||X|X||||||||||
T:               --------------CAGATgCCTcTGcAgACCTCACCAT-----------
R:         15   T0233020123031221223330212101121022110132002.2020..    39        
--
>212_1872_4398_F3	ENSMUST00000113126	-	2601	2620	20	39	50	180	17x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||||||||||||||||X||
T:               -------------------AGGTGTGGTGTGGTGTCaGG-----------
R:         20   T0100201330301102322320111101111011120203302.1221..    39        
--
>212_2714_3361_F3	ENSMUST00000113126	+	2608	2626	21	39	50	170	16x3	
G:       2608    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2626      
                                     ||||||||||||||||X||
T:               --------------------CCACACCACACCTCTGtCT-----------
R:         21   T0100201330121133222320111101111022210222003.1023..    39        
--
>212_3031_2450_F3	ENSMUST00000113126	+	2604	2620	22	38	50	170	17	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                      |||||||||||||||||
T:               ---------------------GACACCACACCACACCT------------
R:         22   T3323302010300130033320211101111011110200103.2323..    38        
--
>212_3485_2284_F3	ENSMUST00000113126	+	537	562	13	38	50	166	16x1x2x1G5	
G:        537    TACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAA    562       
                             ||||||||||||||||XX|X |||||
T:               ------------GATGGCAAGGGTCATGtgGgGACAAC------------
R:         13   T0103032111232231031020012131230302110133031.0302..    38        
--
>213_468_907_F3	ENSMUST00000113126	-	2601	2623	20	42	50	170	6x11x2x4	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                    ||||||X||||||||||X|X|||
T:               -------------------CAGAGGtGTGGTGTGGTgTcAGG--------
R:         20   T122233020103033320331222031110111101211120.3212..1    42        
--
>213_1219_2333_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	3x2x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||X|X||X|||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTC--------------
R:         15   T231020103003013213232031110111101112022230.3112..2    36        
--
>213_2304_3953_F3	ENSMUST00000113126	+	2587	2622	5	40	50	166	9x1x1x1x1x1x1x2T12x6	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                     |||||||||XXXXXXX| ||||||||||||X|||||
T:               ----AAGGTACCCagcacccTTACACCACACCACaCCTCT----------
R:          5   T201330201310033103132031110111101121022200.2312..2    40        
--
>213_2711_2342_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T311002013303100123332031110111101111022231.3132..0    40        
--
>213_3836_4271_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x2x3x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||X||||||||||X|||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T023302010303103123123201111011120111212233.3220..1    39        
--
>214_1053_2847_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T0223020103031011233232011110111201112121020200221.    39        
--
>214_1418_3470_F3	ENSMUST00000113126	-	2605	2625	16	36	50	170	2x14x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAA    2605      
                                ||X|||||||||||||X||||
T:               ---------------GAcAGAGGTGTGGTGTgGTGT--------------
R:         16   T3123020103031011231222011110111201113022032332322.    36        
--
>214_1968_2464_F3	ENSMUST00000113126	+	2605	2627	23	45	50	190	15x3x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||||X||X||||
T:               ----------------------ACACCACACCACACCtCTgTCTA-----
R:         23   T2312201330110131232320311101111011110322312232332.    45        
--
>214_2327_1040_F3	ENSMUST00000113126	-	2603	2626	15	38	50	166	1x2T2x18	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                               |X| ||X|||||||||||||||||
T:               --------------AgATAGaGGTGTGGTGTGGTGTCA------------
R:         15   T0213020103031011233232011110111101112131030001201.    38        
--
>214_2583_452_F3	ENSMUST00000113126	-	2597	2625	15	43	50	170	2x3x3x12x2x2x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               ||X||X||X|||||||||||X|X|X||||
T:               --------------GAcAGaGGtGTGGTGTGGTGtCaGgGTGC-------
R:         15   T3010201030313132012320311101111011320220113332003.    43        
--
>214_2600_74_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2110101030013132312320311101111011120333031323221.    36        
--
>214_2792_921_F3	ENSMUST00000113126	-	2600	2631	9	40	50	172	1x3C1A4x3x14x4	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                         |X|| | ||||X||X|||||||||||||X|||
T:               --------GgTGCAAACAGaGGtGTGGTGTGGTGTCaGGG----------
R:          9   T2330202031113100112320311101111011120200232200100.    40        
--
>214_2903_4226_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x2x3x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||X||||||||||X|||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T0323020103031031231232011110111201112123330330022.    39        
--
>214_3100_1063_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T0233020103031011233232011110111201112123022330203.    39        
--
>214_3216_3402_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T0213020103031031233232011110111201112320030320032.    41        
--
>214_3928_2134_F3	ENSMUST00000113126	+	2605	2623	23	41	50	190	19	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCTG---------
R:         23   T2310201030130102011320311101111011110222133110211.    41        
--
>214_4108_2010_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	1x2x15x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |X|X||||||||||||||X|||
T:               ----------------CaGaGGTGTGGTGTGGTGtCAG------------
R:         17   T0100201330311132322320111101111011321233010103310.    38        
--
>215_304_3625_F3	ENSMUST00000113126	-	2601	2623	20	42	50	190	6x14x3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                    ||||||X|||||||||||||X||
T:               -------------------CAGAGGtGTGGTGTGGTGTCaGG--------
R:         20   T120233022103003310331222031110111101112320.3302..3    42        
--
>215_596_601_F3	ENSMUST00000113126	-	2589	2623	16	50	50	180	3x3x8x2x6x5x3x5	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTACC    2589      
                                |||X||X|||||||X|X|||||X||||X||X||||
T:               ---------------CAGaGGtGTGGTGTgGtGTCAGgGTGCtGGgTACC
R:         16   T121201030313112312320311101112021121220113.2021..3    50        
--
>215_949_4390_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T001330311112022320111101112320001130103002.3232..0    36        
--
>215_1153_1135_F3	ENSMUST00000113126	-	2604	2627	13	36	50	160	1x3x3x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             |X||X||X||X|||||||||||||
T:               ------------TaGAcAGaGGtGTGGTGTGGTGTC--------------
R:         13   T322310102033212221232031110111101112033333.2122..2    36        
--
>215_1482_4004_F3	ENSMUST00000113126	-	2600	2622	19	41	50	170	2x11x7x3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X||||||X||
T:               ------------------AGaGGTGTGGTGTgGTGTCAgGG---------
R:         19   T021202010303103123323201111011120111213003.3302..2    41        
--
>215_1721_622_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T031020103003311221232031110111101112010330.3322..2    36        
--
>215_3470_1043_F3	ENSMUST00000113126	-	2598	2625	15	42	50	186	3x2x12C5x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                               |||X|X||||||||||| |||||X||||
T:               --------------GACaGaGGTGTGGTGTGCTGTCAgGGTG--------
R:         15   T010020133031111212232011110111132112110011.2232..1    42        
--
>215_3765_5071_F3	ENSMUST00000113126	-	2596	2623	18	45	50	170	1x2x11x8x1x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |X|X||||||||||X|||||||XX||||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAGggTGCT-----
R:         18   T313202011303102123323201111011120111212321.3201..2    45        
--
>215_3986_3282_F3	ENSMUST00000113126	+	2604	2626	22	44	50	160	1x13x5x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                      |X||||||||||||X||||X|||
T:               ---------------------GaCACCACACCACAcCTCTgTCT------
R:         22   T211020103002313201232031110111101112022231.0223..3    44        
--
>215_3986_3282_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T211020103002313201232031110111101112022231.0223..3    36        
--
>215_4001_3342_F3	ENSMUST00000113126	-	2595	2620	21	46	50	176	11x5A4x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X|||| ||||X||||
T:               --------------------AGGTGTGGTGTgGTGTAAGGGtGCTG----
R:         21   T021302010303101123123201111011120111302003.3211..3    46        
--
>216_1887_2891_F3	ENSMUST00000113126	-	2596	2625	21	50	50	186	2x3x11x8x1A4	
G:       2625    AGAAAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCT    2596      
                                     ||X||X||||||||||X|||||||X ||||
T:               --------------------GAcAGaGGTGTGGTGTgGTGTCAGgATGCT
R:         21   T20120303202010300131123123201111011120111212323132    50        
--
>216_3302_2924_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x5x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X||||X||||
T:               --------------------AGGTGTGGTGTgGTGTcAGGG---------
R:         21   T02130201030310312332320111101112011111200220203113    41        
--
>216_3725_4784_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x7x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X||||||X||
T:               --------------------AGGTGTGGTGTgGTGTCAgGG---------
R:         21   T03230201030310112332320111101112011121300022323011    41        
--
>216_4161_3222_F3	ENSMUST00000113126	+	2601	2626	19	44	50	180	1x2x13x1x9	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                   |X|X||||||||||||XX||||||||
T:               ------------------CcTgACACCACACCACacCTCTGTCT------
R:         19   T23200232322321300023202111011110112302221122110112    44        
--
>217_287_3839_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T31130201230310012212320111101112011121230223322.22    39        
--
>217_633_2211_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	8x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     ||||||||X|||||||||
T:               --------------------AGGTGTGGtGTGGTGTCA------------
R:         21   T02130201230310112332320111103111011121310223320.31    38        
--
>217_1760_1733_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T13330201030310112012320111101112011121033031310.20    38        
--
>217_2770_3111_F3	ENSMUST00000113126	-	2596	2620	21	45	50	190	11x8x2x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||||X|X|||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGtGCT-----
R:         21   T02130201030310312332320111101112011121230313233.00    45        
--
>218_303_2469_F3	ENSMUST00000113126	+	2210	2241	4	35	50	160	1x2x5x1x2x2x1x13x5	
G:       2210    TGTGCCCAGCGTAAGTGCATGCGTGGGTGCGTGCGTGCGTGCGTGCGTGC    2241      
                    |X|X||||XX|X|XX||||||||||||X||||
T:               ---GcCcAGCGtaAgTgcATGCGTGGGTGCgTGCG---------------
R:          4   T200300212333200100131331100113111333123332..222..0    35        
--
>218_322_1952_F3	ENSMUST00000113126	-	2602	2620	19	37	50	190	19	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                   |||||||||||||||||||
T:               ------------------AGGTGTGGTGTGGTGTCAG-------------
R:         19   T130201030313102312320111101111011121233333..211..2    37        
--
>218_833_4489_F3	ENSMUST00000113126	-	2603	2627	14	38	50	170	2x2x3x11x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X|X||X||||||||||X||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCA------------
R:         14   T023302010303103123123201111011120111210033..310..3    38        
--
>218_952_4925_F3	ENSMUST00000113126	+	2598	2622	16	40	50	196	4x17G3	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                ||||X|||||||||||||||| |||
T:               ---------------CACCcTGACACCACACCACACGTCT----------
R:         16   T121330201030313111032121110111101111312200..102..1    40        
--
>218_1699_3354_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x11x1x9	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||||||||||XX||||||||
T:               ---------------GAcAGaGGTGTGGTGTggTGTCAGGG---------
R:         16   T021102010303133123121201111011121111212003..222..0    41        
--
>218_1765_3221_F3	ENSMUST00000113126	-	2599	2623	18	42	50	190	14x5x1x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  ||||||||||||||X||||XX||||
T:               -----------------CAGAGGTGTGGTGTgGTGTcaGGGT--------
R:         18   T021002010303103123122201111011120111022001..323..3    42        
--
>218_2046_1293_F3	ENSMUST00000113126	-	2601	2620	19	38	50	160	3x8x9	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |||X|||||||X||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGG------------
R:         19   T130201030313102312320311101112011121202033..310..2    38        
--
>218_2274_4537_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	11x7x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||X||||||X||||
T:               ----------------------ACACCACACCAcACCTCTgTCTA-----
R:         23   T233220103013311101032031110111101211022231..222..1    45        
--
>218_2587_1683_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T021302010303103123323201111011120111212203..200..3    39        
--
>218_3382_947_F3	ENSMUST00000113126	-	2599	2627	14	42	50	176	2x2T2x11x6x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                              ||X| ||X||||||||||X|||||X||||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCaGGGT--------
R:         14   T023302010303103123323201111011120111202001..232..2    42        
--
>218_3469_3552_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T001302013303101123123201111011120111212303..300..2    39        
--
>218_3733_3738_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T021302012303101123323201111011120111212300..313..2    39        
--
>218_3878_3150_F3	ENSMUST00000113126	-	2605	2627	14	36	50	170	2x2x14x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAA    2605      
                              ||X|X|||||||||||||X||||
T:               -------------TAgAcAGAGGTGTGGTGTgGTGT--------------
R:         14   T001302010303103123122201111011120111303231..223..1    36        
--
>218_4111_4672_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T021302011303101123123201111011120111212200..102..1    39        
--
>219_687_3018_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T021302010303103123323201111011120111202003.3333..0    41        
--
>219_1686_3831_F3	ENSMUST00000113126	-	2600	2627	14	41	50	166	2x2T2x11x6x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X| ||X||||||||||X|||||X|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCaGGG---------
R:         14   T021302012303103123323201111011120111202002.3133..2    41        
--
>219_1697_3599_F3	ENSMUST00000113126	-	2602	2631	10	39	50	180	2x2x2x2x3x15x4	
G:       2631    GAAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                          ||X|X|X|X||X||||||||||||||X|||
T:               ---------GGtGtAgAcAGaGGTGTGGTGTGGTGtCAG-----------
R:         10   T312302012303103022123201111011110110212112.0220..0    39        
--
>219_1966_2545_F3	ENSMUST00000113126	-	2604	2624	21	41	50	170	4x3x14	
G:       2624    GAAAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAA    2604      
                                     ||||X||X|||||||||||||
T:               --------------------ACAGaGGtGTGGTGTGGTGTC---------
R:         21   T111232332201000300311112320311101111011120.3312..2    41        
--
>219_4234_2863_F3	ENSMUST00000113126	-	2602	2627	17	42	50	160	2x1x4x2x6x11	
G:       2627    AAAGAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAA    2602      
                                 ||XX|||X|X|||||X||||||||||
T:               ----------------TAgaCAGaGgTGTGGtGTGGTGTCAG--------
R:         17   T301003320333020103031121231111031110111212.2322..3    42        
--
>220_378_1309_F3	ENSMUST00000113126	-	2598	2625	18	45	50	166	2x3x3x12x4A3	
G:       2625    AAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAA    2598      
                                  ||X||X||X|||||||||||X||| |||
T:               -----------------GAcAGaGGtGTGGTGTGGTGtCAGAGTG-----
R:         18   T12123302010303031023123203111011110113212221112..1    45        
--
>220_731_3706_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x1x10x11	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||XX|||||||||X||||||||||
T:               ---------------GAcaGAGGTGTGGtGTGGTGTCAG-----------
R:         16   T31230201230310312232220111102111011121230200200..1    39        
--
>220_960_680_F3	ENSMUST00000113126	-	2596	2620	19	43	50	190	3x12x5x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||||||||||X||||X||||
T:               ------------------AGGtGTGGTGTGGTGtCAGGgTGCT-------
R:         19   T12120103031310231232021110111101102120211320322..1    43        
--
>220_2582_2961_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	1x2x11x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |X|X||||||||||X|||||||||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAGGG---------
R:         18   T02130201030310012332320111101112011121200223301..0    41        
--
>220_3168_2747_F3	ENSMUST00000113126	-	2600	2620	21	41	50	190	11x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGGG---------
R:         21   T11130201030310112332320111101112011121200302032..3    41        
--
>220_3906_4760_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02130201030310312332320111101112011121220023311..3    39        
--
>220_4301_4306_F3	ENSMUST00000113126	-	2600	2625	14	39	50	160	2x3x3x8x2x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                              ||X||X||X|||||||X|X|||||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGG-----------
R:         14   T11220103031313231232031110111202112120033101321..0    39        
--
>221_120_2811_F3	ENSMUST00000113126	-	2601	2623	20	42	50	170	3x3x14x3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                    |||X||X|||||||||||||X||
T:               -------------------CAGaGGtGTGGTGTGGTGTCaGG--------
R:         20   T123233020103031310331232031110111101112320..102..2    42        
--
>221_132_3674_F3	ENSMUST00000113126	+	1676	1696	21	41	50	170	5x5x11	
G:       1676    CAAGGCCAGGTGGACCGGAGTCCACCAGCATCCTGTAGTGCCGAGACCCG    1696      
                                     |||||X||||X||||||||||
T:               --------------------TCCACcAGCAtCCTGTAGTGC---------
R:         21   T023002013303201123323201111231120211321132..321..2    41        
--
>221_496_3962_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T021302011303103122123201111011120111213032..030..3    38        
--
>221_811_863_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T233220103032011211232031110111101110010130..233..0    35        
--
>221_1293_3373_F3	ENSMUST00000113126	+	2601	2629	19	47	50	176	1x2T18x1x6	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                   |X| ||||||||||||||||||XX|||||
T:               ------------------CcTTACACCACACCACACCTCTgtCTACA---
R:         19   T001230332112201332332031110111101111022223..111..2    47        
--
>221_1759_2886_F3	ENSMUST00000113126	-	2604	2627	14	37	50	180	2x2x14x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                              ||X|X|||||||||||||X|||||
T:               -------------TAgAcAGAGGTGTGGTGTgGTGTC-------------
R:         14   T021302012303103120122201111011120111200230..301..0    37        
--
>221_2001_1212_F3	ENSMUST00000113126	-	2602	2623	20	41	50	200	6x16	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    ||||||X|||||||||||||||
T:               -------------------CAGAGGtGTGGTGTGGTGTCAG---------
R:         20   T121233020103033310331222031110111101112123..323..2    41        
--
>221_2429_2704_F3	ENSMUST00000113126	-	2604	2620	21	37	50	170	17	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                     |||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTC-------------
R:         21   T021302010303103123323201111011110111203303..221..2    37        
--
>221_2808_2640_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T023002013303101120123201111011120111212232..000..0    39        
--
>221_2861_2277_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T021302010303103123323201111011120111212102..312..0    39        
--
>221_3255_2657_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	2x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  ||X||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTC--------------
R:         18   T231320103003310023232011110111101112012200..211..1    36        
--
>221_3610_4220_F3	ENSMUST00000113126	+	2602	2627	20	45	50	180	8x11x2x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                    ||||||||X||||||||||X|X||||
T:               -------------------CTGACACCaCACCACACCTcTgTCTA-----
R:         20   T203020133011030223222121110211101111020221..122..2    45        
--
>221_3659_991_F3	ENSMUST00000113126	-	2601	2620	21	40	50	180	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T331302010321101123323201111011120111212023..212..3    40        
--
>221_4179_2072_F3	ENSMUST00000113126	-	2601	2620	21	40	50	160	11x6x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X|||||X||
T:               --------------------AGGTGTGGTGTgGTGTCaGG----------
R:         21   T021302010303103123323201111011120111202033..202..3    40        
--
>222_2162_4231_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T233220123020000311232031110111101112022331..222..3    36        
--
>222_2167_1471_F3	ENSMUST00000113126	-	2595	2620	21	46	50	180	11x8x2x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X|||||||X|X||||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGtGCTG----
R:         21   T021302010303103123323201111011120111212302..311..1    46        
--
>222_2334_2184_F3	ENSMUST00000113126	-	2595	2620	21	46	50	180	11x7x3x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X||||||X||X||||
T:               --------------------AGGTGTGGTGTgGTGTCAgGGtGCTG----
R:         21   T313302011303103120323201111011120111213000..311..0    46        
--
>222_2380_4702_F3	ENSMUST00000113126	-	2595	2627	14	46	50	176	2x2T2x11x7x3x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                              ||X| ||X||||||||||X||||||X||X||||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAgGGtGCTG----
R:         14   T023302010303103123323201111011120111211003..013..2    46        
--
>222_2546_1272_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	16x3	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||||||||X||
T:               ---------------------GACACCACACCACACCtCT----------
R:         22   T111002011303000120232221110111101111032230..113..3    40        
--
>222_3890_2138_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T022302010303101123323201111011120111212203..321..0    39        
--
>223_2289_2755_F3	ENSMUST00000113126	-	2598	2620	23	45	50	170	3x14x6	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAA    2598      
                                       |||X|||||||||||||X|||||
T:               ----------------------AGGtGTGGTGTGGTGTCaGGGTG-----
R:         23   T121233020103001310331232031110111101112320..1122.2    45        
--
>223_2575_487_F3	ENSMUST00000113126	-	2602	2623	20	41	50	180	3x3x16	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |||X||X|||||||||||||||
T:               -------------------CAGaGGtGTGGTGTGGTGTCAG---------
R:         20   T121233020103033310331232031110111101112122..2122.3    41        
--
>223_3153_2989_F3	ENSMUST00000113126	-	454	487	5	38	50	166	4x1C9x2x5x1x2x4x5	
G:        487    CTGCTCCAGGCGTACAGACAATATGGACTGCTTGCCTGCAAGCCCTGGGC    454       
                     ||||X |||||||||X|X||||XX|X|||X||||
T:               ----TCCAgCCGTACAGACaAtATGGacTgCTTgCCTG------------
R:          5   T131302010303131122120233100023320230211032..1213.3    38        
--
>224_557_3334_F3	ENSMUST00000113126	-	2600	2620	21	41	50	190	11x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGGG---------
R:         21   T0213020103031031233232011110111201112120022.3012.1    41        
--
>224_1401_9_F3	ENSMUST00000113126	-	2597	2623	14	40	50	170	3x3x12x4x2x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                              |||X||X|||||||||||X|||X|X||
T:               -------------CAGaGGtGTGGTGTGGTGtCAGgGtGC----------
R:         14   T2201030313112312320311101111011021230313303.1202.2    40        
--
>224_2272_2830_F3	ENSMUST00000113126	+	2604	2627	22	45	50	170	1x15x2x6	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      |X||||||||||||||X|X|||||
T:               ---------------------GaCACCACACCACACCtCtGTCTA-----
R:         22   T0320303121123322021323311101111011110320112.1233.3    45        
--
>224_3318_1292_F3	ENSMUST00000113126	+	2589	2622	7	40	50	166	2x1x5x4x1x2T11x2x5	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                       ||XX||||X|||XX| |||||||||||X|X||||
T:               ------GGtaCCCAgCACccTTACACCACACCAcAcCTCT----------
R:          7   T2330201030100103111320311101111012120222333.3210.1    40        
--
>224_3578_4531_F3	ENSMUST00000113126	+	2220	2244	14	38	50	156	1x2T13x5x3	
G:       2220    TGTGCCCAGCGTAAGTGCATGCGTGGGTGCGTGCGTGCGTGCGTGCGTGC    2244      
                              |X| |||||||||||||X||||X||
T:               -------------AgTTCATGCGTGGGTGCgTGCGtGC------------
R:         14   T0100201330321101021313311001131113331302323.2222.0    38        
--
>224_3811_1956_F3	ENSMUST00000113126	-	2599	2627	14	42	50	176	2x2T2x11x8x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                              ||X| ||X||||||||||X|||||||X||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAGgGT--------
R:         14   T0213020123031031233232011110111201112122013.0023.3    42        
--
>224_3884_1717_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T2213020103031031203232011110111201112122321.3032.0    39        
--
>225_1443_3296_F3	ENSMUST00000113126	-	2602	2623	20	41	50	160	3x3x8x8	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |||X||X|||||||X|||||||
T:               -------------------CAGaGGtGTGGTGTgGTGTCAG---------
R:         20   T31023301010300331033123203111011120111212130322..1    41        
--
>225_1617_1195_F3	ENSMUST00000113126	-	2600	2627	14	41	50	166	2x2T2x14x4x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X| ||X|||||||||||||X|||X||
T:               -------------TAgATAGaGGTGTGGTGTGGTgTCAgGG---------
R:         14   T02020203030310302332320111101111012121000033112..3    41        
--
>225_2597_4914_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T02120203330310312332320111101112011120200323302..0    41        
--
>225_2861_1906_F3	ENSMUST00000113126	-	2602	2629	12	39	50	166	2x2x2T2x11x8	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X| ||X||||||||||X|||||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCAG-----------
R:         12   T02100202330310312332320111101112011121230022221..3    39        
--
>225_3618_3589_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23102010303301121123203111011110111202323333130..3    36        
--
>225_3699_4996_F3	ENSMUST00000113126	-	2596	2623	16	43	50	166	3x3x8x8x1A4	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                |||X||X|||||||X|||||||X ||||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGgATGCT-------
R:         16   T12020103031310231232031110111201112123231323311..1    43        
--
>226_1665_1556_F3	ENSMUST00000113126	-	2596	2625	17	46	50	170	2x3x3x10x6x1x5	
G:       2625    AGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAA    2596      
                                 ||X||X||X|||||||||X|||||XX||||
T:               ----------------GAcAGaGGtGTGGTGTGGtGTCAGggTGCT----
R:         17   T332330221030033102312320311101111021121232.2322..1    46        
--
>226_3002_1379_F3	ENSMUST00000113126	-	2601	2622	18	39	50	180	2x2x18	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  ||X|X|||||||||||||||||
T:               -----------------AGaGgTGTGGTGTGGTGTCAGG-----------
R:         18   T010002133030111232232211110111101112120212.2032..1    39        
--
>226_3085_5060_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T021302012303101123323201111011120111212302.1102..2    39        
--
>226_3214_1686_F3	ENSMUST00000113126	+	2604	2627	22	45	50	190	1x19x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      |X||||||||||||||||||X|||
T:               ---------------------GaCACCACACCACACCTCTGtCTA-----
R:         22   T103020103302010303232031110111101111022213.3332..3    45        
--
>226_3363_4163_F3	ENSMUST00000113126	-	2602	2620	19	37	50	170	3x16	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                   |||X|||||||||||||||
T:               ------------------AGGtGTGGTGTGGTGTCAG-------------
R:         19   T211201030313102312320211101111011121220001.2302..1    37        
--
>227_781_1366_F3	ENSMUST00000113126	-	2208	2242	16	50	50	170	4x2x10x5x2x2x3x1x3x3	
G:       2242    GGGGAGGTCGACACGACGCACGCACCCACGCATGCACTTACGCTGGGCAC    2208      
                                ||||X|X|||||||||X||||X|X|X||XX||X||
T:               ---------------ACGCaCgCACCCACGCaTGCAcTtAcGCtgGGcAC
R:         16   T11010101031300031333113110011332313102233331300111    50        
--
>227_1424_3666_F3	ENSMUST00000113126	-	2596	2629	12	45	50	172	2x2x2T2x11x7x3A3	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                            ||X|X| ||X||||||||||X||||||X|| |||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCAgGGAGCT-----
R:         12   T02210201230310312332320111101112011121100223203320    45        
--
>227_1731_2909_F3	ENSMUST00000113126	-	2596	2620	19	43	50	170	3x8x8x2x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||||||X|||||||X|X|||
T:               ------------------AGGtGTGGTGTgGTGTCAGgGtGCT-------
R:         19   T20020103031310231232031110111201112121001322300100    43        
--
>228_609_1005_F3	ENSMUST00000113126	-	2594	2627	14	47	50	172	2x2T2x11x2x5x3C5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                              ||X| ||X||||||||||X|X||||X|| |||||
T:               -------------TAgATAGaGGTGTGGTGTgGtGTCAgGGCGCTGG---
R:         14   T31130201230310312332320111101112021121100333210133    47        
--
>228_2085_3323_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	13x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||||X||||
T:               ----------------------ACACCACACCACAcCTCT----------
R:         23   T13321112002000300323213111011110111302223302212333    40        
--
>228_3996_2340_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121233101300132    39        
--
>228_4015_1712_F3	ENSMUST00000113126	-	2603	2620	25	42	50	180	18	
G:       2620    GAAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAA    2603      
                                         ||||||||||||||||||
T:               ------------------------AGGTGTGGTGTGGTGTCA--------
R:         25   T10210031020103030013003232011110111101112102032222    42        
--
>229_1599_1743_F3	ENSMUST00000113126	-	2602	2625	14	37	50	180	2x3x11x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||||||||||X|||||||
T:               -------------GAcAGaGGTGTGGTGTgGTGTCAG-------------
R:         14   T2002010223131023123201111011120111212102302.110...    37        
--
>229_2632_3095_F3	ENSMUST00000113126	-	2595	2626	12	43	50	206	3x4x2x8x10C4	
G:       2626    ATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATCC    2595      
                            |||X|||X|X|||||||X||||||||| ||||
T:               -----------AGAcAGAgGtGTGGTGTgGTGTCAGGGCGCTG-------
R:         12   T0102103101312231220031110111301112120033321.302...    43        
--
>229_3016_9_F3	ENSMUST00000113126	-	2597	2623	16	42	50	170	3x3x8x8x2x3	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                |||X||X|||||||X|||||||X|X||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGgGtGC--------
R:         16   T1212010303131123123203111011120111212303130.010...    42        
--
>229_3543_2139_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	3x3x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |||X||X||X|||||||||||||
T:               -------------AGAcAGaGGtGTGGTGTGGTGTC--------------
R:         14   T2330203230132122012320311101111011120003130.332...    36        
--
>230_259_883_F3	ENSMUST00000113126	-	2607	2629	21	43	50	170	3x1x16x3	
G:       2629    GGAAAGAAAGAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTACTGTTT    2607      
                                     |||XX|||||||||||||||X||
T:               --------------------TGTagACAGAGGTGTGGTGTgGT-------
R:         21   T0100112231130020123031111211222011110111201.031..2    43        
--
>230_432_1346_F3	ENSMUST00000113126	-	2601	2631	9	39	50	176	2x4x2x2T3x14x3	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                         ||X|||X|X| |||X|||||||||||||X||
T:               --------GGtGTAgAcATAGGtGTGGTGTGGTGTCaGG-----------
R:          9   T2310201020311312313320011101111011120202330.301..0    39        
--
>230_1269_3248_F3	ENSMUST00000113126	-	2592	2620	18	46	50	226	3x18A7	
G:       2620    ATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATCC    2592      
                                  |||X||||||||||||||||| |||||||
T:               -----------------AGGtGTGGTGTGGTGTCAGGGAGCTGGGT----
R:         18   T3122133001011231232031110111101112120022321.311..0    46        
--
>230_1312_332_F3	ENSMUST00000113126	-	2603	2629	11	37	50	170	4x2x1x2x15x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                           ||||X|XX|X||||||||||||||X||
T:               ----------TGTAgAcaGaGGTGTGGTGTGGTGtCA-------------
R:         11   T1030201031311332232120111101111011321333010.031..3    37        
--
>230_1442_2808_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x14x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||X|||||||||||||X||||
T:               -------------------CTgACACCACACCACAcCTCT----------
R:         20   T2110201030000112331320211101111011120222002.233..0    40        
--
>230_1628_5035_F3	ENSMUST00000113126	-	2597	2620	19	42	50	200	3x14x7	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||||||||X||||||
T:               ------------------AGGtGTGGTGTGGTGTCaGGGTGC--------
R:         19   T1302010303131023123203111011110111202001130.333..0    42        
--
>230_1875_3032_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2312111002030300011320311101111011110222301.322..0    40        
--
>230_1930_3512_F3	ENSMUST00000113126	-	2593	2617	26	50	50	160	8x8x2x7	
G:       2617    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGG    2593      
                                          ||||||||X|||||||X|X||||||
T:               -------------------------TGTGGTGTgGTGTCAGgGtGCTGGG
R:         26   T1232330201030013103312320311101112011121210.132..1    50        
--
>230_2051_229_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T0233020103031011233232011110111201112320021.300..0    41        
--
>230_2110_765_F3	ENSMUST00000113126	-	2598	2626	12	40	50	176	1x2x3C2x14x6	
G:       2626    ATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATCC    2598      
                            |X|X|| ||X|||||||||||||X|||||
T:               -----------AgAcAGCGGtGTGGTGTGGTGTCaGGGTG----------
R:         12   T1322103001311231233031110111101112220011102.203..2    40        
--
>230_2271_1040_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	3x14x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||X|||||||||||||X|||
T:               ------------------AGGtGTGGTGTGGTGTCaGGG-----------
R:         19   T1302010303131023123203111011110111202003100.202..0    39        
--
>230_2275_1327_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x12x7	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||X|||||||||||X||||||
T:               -------------------CTgACACCACACCAcACCTCT----------
R:         20   T3312221000330301032320211101111013110222233.311..1    40        
--
>230_2350_4681_F3	ENSMUST00000113126	-	2595	2620	20	45	50	176	15x2x4C4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                    |||||||||||||||X|X||| ||||
T:               -------------------AGGTGTGGTGTGGTGtCaGGGCGCTG-----
R:         20   T1112323302010303133320111101111011220200333.322..1    45        
--
>230_2476_2244_F3	ENSMUST00000113126	-	2602	2625	13	36	50	180	2x3x3x16	
G:       2625    ATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCC    2602      
                             ||X||X||X|||||||||||||||
T:               ------------GAcAGaGGtGTGGTGTGGTGTCAG--------------
R:         13   T1132103001311231232021110111101112123330020.133..2    36        
--
>230_2507_160_F3	ENSMUST00000113126	+	2592	2620	10	38	50	176	1x4x5x2T11x5	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                          |X|||X||||X| |||||||||||X||||
T:               ---------AcCCAgCACCcTTACACCACACCAcACCT------------
R:         10   T3330201030000103110320311101111010110211000.303..1    38        
--
>230_2552_5071_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	3x2x13x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                |||X|X||||||||||||X||||
T:               ---------------GACaGaGGTGTGGTGTGGtGTCA------------
R:         16   T0213020113031031213232011110111100112131323.320..3    38        
--
>230_2664_753_F3	ENSMUST00000113126	-	2602	2623	20	41	50	160	3x3x8x8	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |||X||X|||||||X|||||||
T:               -------------------CAGaGGtGTGGTGTgGTGTCAG---------
R:         20   T1232330201030313103312320311101112011121233.330..2    41        
--
>230_2694_1816_F3	ENSMUST00000113126	-	2595	2620	20	45	50	170	3x12x2x3x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                    |||X|||||||||||X|X||X|||||
T:               -------------------AGGtGTGGTGTGGTGtCaGGgTGCTG-----
R:         20   T2330201032133111312320311101111011220203113.221..2    45        
--
>230_2713_1983_F3	ENSMUST00000113126	-	2602	2620	19	37	50	170	11x8	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                   |||||||||||X|||||||
T:               ------------------AGGTGTGGTGTgGTGTCAG-------------
R:         19   T1302010303131023123201111011120111212203030.030..0    37        
--
>230_2807_4310_F3	ENSMUST00000113126	-	2601	2629	12	40	50	170	2x2x3x2x11x6x3	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                            ||X|X||X|X||||||||||X|||||X||
T:               -----------TGtAgACaGaGGTGTGGTGTgGTGTCaGG----------
R:         12   T0213020133031031213212011110111201112220303.201..1    40        
--
>230_2902_2349_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2330201300130330011330311101111011110222203.212..3    40        
--
>230_2962_1908_F3	ENSMUST00000113126	-	2595	2629	12	46	50	172	2x2x2T2x11x8x2C4	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                            ||X|X| ||X||||||||||X|||||||X| ||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCAGgGCGCTG----
R:         12   T0213020133031031233232011110111201112121033.112..0    46        
--
>230_3191_2218_F3	ENSMUST00000113126	-	2591	2622	19	50	50	176	2x11x7T2x1x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2591      
                                   ||X||||||||||X|||||| ||XX|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCATGGtgCTGGGTA
R:         19   T0213020133031011233232011110111201112131023.310..0    50        
--
>230_3213_2295_F3	ENSMUST00000113126	-	2600	2625	16	41	50	160	2x1x2x8x10x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||XX|X|||||||X|||||||||X||
T:               ---------------GAcaGaGGTGTGGtGTGGTGTCAgGG---------
R:         16   T3113020103031021230232011110211101112130032.330..0    41        
--
>230_3222_4656_F3	ENSMUST00000113126	-	2598	2625	14	41	50	200	2x3x3x8x12	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                              ||X||X||X|||||||X|||||||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGGGTG---------
R:         14   T3102010303231023123203111011120111212001100.031..3    41        
--
>230_3312_2317_F3	ENSMUST00000113126	-	2603	2620	20	37	50	180	18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    ||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCA-------------
R:         20   T0122201120331302221320111101111011121023030.331..2    37        
--
>230_3453_3513_F3	ENSMUST00000113126	-	2600	2626	14	40	50	196	3x3C16x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              |||X|| ||||||||||||||||X|||
T:               -------------AGAcAGCGGTGTGGTGTGGTGTCaGGG----------
R:         14   T1030201030330122312330111101111011120200010.030..3    40        
--
>230_3865_1834_F3	ENSMUST00000113126	-	2598	2620	23	45	50	160	3x8x8x4	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAA    2598      
                                       |||X|||||||X|||||||X|||
T:               ----------------------AGGtGTGGTGTgGTGTCAGgGTG-----
R:         23   T1232330221030013103312320311101112011121220.210..2    45        
--
>230_3900_3773_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T0233020133031031233232011110111201112122333.000..0    39        
--
>230_3924_2836_F3	ENSMUST00000113126	-	2601	2624	16	39	50	180	1x3x3x17	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                |X||X||X||||||||||||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCAGG-----------
R:         16   T1110210030203131312320311101111011121202320.312..2    39        
--
>230_4141_4260_F3	ENSMUST00000113126	-	2594	2627	14	47	50	196	2x5x2x9x6x2C7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                              ||X||||X|X||||||||X|||||X| |||||||
T:               -------------TAgACAGaGgTGTGGTGTgGTGTCaGCGTGCTGG---
R:         14   T3113020123031031211232311110111201112223311.110..0    47        
--
>231_1628_2456_F3	ENSMUST00000113126	-	2599	2627	14	42	50	176	2x2T2x11x7x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                              ||X| ||X||||||||||X||||||X|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAgGGT--------
R:         14   T0202020123031031233202011110111201112100013.2320..    42        
--
>231_1755_1119_F3	ENSMUST00000113126	+	2592	2622	10	40	50	196	2x7x1x2T13x5	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                          ||X||||||XX| |||||||||||||X||||
T:               ---------ACcCAGCACccTTACACCACACCACAcCTCT----------
R:         10   T2320201030130123112320311101111011120222001.3332..    40        
--
>231_1791_1289_F3	ENSMUST00000113126	-	2595	2623	15	43	50	190	3x3x16x2x1x4	
G:       2623    ATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATCC    2595      
                               |||X||X|||||||||||||||X|XX|||
T:               --------------CAGaGGtGTGGTGTGGTGTCAGgGtgCTG-------
R:         15   T3122133001011331232031110111101112122032321.0102..    43        
--
>231_1992_2257_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T0213020103031031233232011110111201112123000.3033..    39        
--
>231_2175_1801_F3	ENSMUST00000113126	-	2602	2627	14	39	50	166	2x2T2x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X| ||X||||||||||X|||||||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T0213020123031031233232011110111201112122323.3330..    39        
--
>231_3009_1373_F3	ENSMUST00000113126	-	2599	2623	14	38	50	190	3x3x14x5	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                              |||X||X|||||||||||||X||||
T:               -------------CAGaGGtGTGGTGTGGTGTCaGGGT------------
R:         14   T2201030313112312320311101111011123200101031.3220..    38        
--
>231_3466_445_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x10x7	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||X||||||
T:               ----------------CAGaGGtGTGGTGTGGtGTCAGG-----------
R:         17   T0020201232031103012320311101111021121202301.0123..    39        
--
>231_3673_2551_F3	ENSMUST00000113126	-	2597	2622	18	43	50	166	2x15x2x3A3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                  ||X||||||||||||||X|X|| |||
T:               -----------------AGaGGTGTGGTGTGGTGtCaGGATGC-------
R:         18   T0100201330111132222320111101111011220202313.0021..    43        
--
>231_3756_1453_F3	ENSMUST00000113126	-	2598	2623	17	42	50	166	3x3x14C1x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                 |||X||X||||||||||||| |X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCCGgGTG--------
R:         17   T2310201330030103012320311101111011120320111.3223..    42        
--
>231_3857_1951_F3	ENSMUST00000113126	-	2596	2620	21	45	50	186	11x7A6	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||| ||||||
T:               --------------------AGGTGTGGTGTgGTGTCAAGGTGCT-----
R:         21   T0221020103031030233232011110111201112102011.3222..    45        
--
>231_3870_4046_F3	ENSMUST00000113126	-	2600	2623	18	41	50	160	1x2x11x7x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |X|X||||||||||X||||||X||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAgGG---------
R:         18   T0013020133031011233232011110111201112100033.3122..    41        
--
>232_1199_1632_F3	ENSMUST00000113126	-	2604	2625	16	37	50	160	2x1x2x17	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                ||XX|X||||||||||||||||
T:               ---------------GAcaGaGGTGTGGTGTGGTGTC-------------
R:         16   T311302010303103023023201111011110111233202.2302..0    37        
--
>232_1254_3844_F3	ENSMUST00000113126	-	2596	2625	18	47	50	170	1x4x3x12x2x2x6	
G:       2625    AAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                  |X|||X||X|||||||||||X|X|X|||||
T:               -----------------GaCAGaGGtGTGGTGTGGTGtCaGgGTGCT---
R:         18   T121233020103003310311232031110111101132222.1132..1    47        
--
>232_1360_2898_F3	ENSMUST00000113126	+	2592	2623	10	41	50	186	1x4x2x3x2T16x3	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                          |X|||X|X||X| ||||||||||||||||X||
T:               ---------AcCCAgCaCCcTTACACCACACCACACCTcTG---------
R:         10   T231020133000010321032031110111101111023210.2321..1    41        
--
>232_2237_1728_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x13x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X||||||||||||X||||
T:               -------------------AGGtGTGGTGTGGTGTcAGGG----------
R:         20   T010020133033111212232031110111101113120002.0031..3    40        
--
>232_2597_2015_F3	ENSMUST00000113126	-	2604	2620	19	35	50	170	17	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAATC    2604      
                                   |||||||||||||||||
T:               ------------------AGGTGTGGTGTGGTGTC---------------
R:         19   T310201030313102312320111101111011120230331.1333..1    35        
--
>232_2937_1674_F3	ENSMUST00000113126	-	2597	2625	12	40	50	176	2x3x2x1x16A4	
G:       2625    TTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                            ||X||X|XX||||||||||||||| ||||
T:               -----------GAcAGaGgtGTGGTGTGGTGTCAGAGTGC----------
R:         12   T220103011311231232331110111101112122211333.2332..0    40        
--
>232_2963_3634_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T023302012303103123323201111011120111212133.3302..1    39        
--
>232_3188_1117_F3	ENSMUST00000113126	-	2604	2623	18	37	50	180	14x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                  ||||||||||||||X|||||
T:               -----------------CAGAGGTGTGGTGTgGTGTC-------------
R:         18   T002330210303103122122201111011120111222200.2100..2    37        
--
>232_3437_590_F3	ENSMUST00000113126	-	2601	2620	19	38	50	160	3x11x6	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |||X||||||||||X|||||
T:               ------------------AGGtGTGGTGTGGTgTCAGG------------
R:         19   T130201030313102312320311101111012121203333.0113..2    38        
--
>232_3518_1535_F3	ENSMUST00000113126	-	2601	2620	20	39	50	180	17x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||||||||||||||||X||
T:               -------------------AGGTGTGGTGTGGTGTCaGG-----------
R:         20   T233020103003013001232011110111101112020110.2222..3    39        
--
>232_4004_2378_F3	ENSMUST00000113126	-	2597	2620	19	42	50	160	3x8x8x2x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||X|||||||X|X||
T:               ------------------AGGtGTGGTGTgGTGTCAGgGtGC--------
R:         19   T200201030313102312320311101112011121230313.3130..2    42        
--
>232_4090_4503_F3	ENSMUST00000113126	-	2600	2620	20	40	50	190	3x18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAGGG----------
R:         20   T233020103013013033232031110111101112120003.0232..2    40        
--
>233_1053_4522_F3	ENSMUST00000113126	-	2602	2627	14	39	50	166	2x2T2x14x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X| ||X|||||||||||||X||||
T:               -------------TAgATAGaGGTGTGGTGTGGTgTCAG-----------
R:         14   T02100201130310312332320111101111012121223032322..2    39        
--
>233_1242_2575_F3	ENSMUST00000113126	-	2596	2620	21	45	50	176	17x2x2A3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||||||||X|X| |||
T:               --------------------AGGTGTGGTGTGGTGTCaGgGAGCT-----
R:         21   T13030201230310302330320111101111011120220223203..0    45        
--
>233_1418_2255_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x3x16	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||X|||||||||||||||
T:               ---------------GAcAGaGGtGTGGTGTGGTGTCAG-----------
R:         16   T23303011030313312312320311101111011121223203310..2    39        
--
>233_1479_1882_F3	ENSMUST00000113126	-	2600	2625	21	46	50	180	2x14x2x2x6	
G:       2625    AGAAAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAA    2600      
                                     ||X|||||||||||||X|X|X|||||
T:               --------------------GAcAGAGGTGTGGTGTgGtGtCAGGG----
R:         21   T23023002002010300031123122201111011120310212000..2    46        
--
>233_1846_1860_F3	ENSMUST00000113126	-	2596	2627	14	45	50	186	2x2T2x11x8x2x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X| ||X||||||||||X|||||||X|X|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAGgGtGCT-----
R:         14   T02130201230310312332320111101112011121220213220..1    45        
--
>233_1854_4413_F3	ENSMUST00000113126	+	2590	2621	8	39	50	152	1x3x2T2x2G2x13x5	
G:       2590    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                        |X||X| ||X| ||X||||||||||||X||||
T:               -------GtACcCTGCaCGCTgACACCACACCACaCCTC-----------
R:          8   T23222013331302132133222111011110113102213031233..3    39        
--
>233_2027_4657_F3	ENSMUST00000113126	-	2589	2620	19	50	50	166	3x8x2x6x2C5x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTACC    2589      
                                   |||X|||||||X|X|||||X| |||||X||||
T:               ------------------AGGtGTGGTGTgGtGTCAGgGCGCTGGgTACC
R:         19   T11213103031310231232031110111202112123033321011..2    50        
--
>233_2214_774_F3	ENSMUST00000113126	-	2722	2749	11	38	50	180	3x3x6x3x2x11	
G:       2749    TATTACATCGGCTTAGACACAATGATTTAAAAAATGTCCAAACACAGCTC    2722      
                           |||X||X|||||X||X|X||||||||||
T:               ----------GCTtAGaCACAAtGAtTtAAAAAATGTC------------
R:         11   T01030331112322320111101122013000003112120010222..0    38        
--
>233_2708_2129_F3	ENSMUST00000113126	-	2604	2623	17	36	50	180	6x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 ||||||X|||||||||||||
T:               ----------------CAGAGGtGTGGTGTGGTGTC--------------
R:         17   T03102010303131123122203111011110111201210302222..2    36        
--
>233_3307_4094_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T30102010300231220123203111011110111202302033032..2    36        
--
>233_3737_2614_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T02330201230310312332320111101112011122200302213..0    41        
--
>234_2123_3228_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x12x7	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X|||||||||||X||||||
T:               ------------------AGaGGTGTGGTGTGgTGTCAG-----------
R:         19   T022102010303103123323201111011112111212203033313.1    39        
--
>234_3252_1327_F3	ENSMUST00000113126	+	637	656	13	32	50	160	2x14x4	
G:        637    TGACCGTGGTGACCATGGCCAGCGCCAGGGTGCAGGACCTCATCGGGCTC    656       
                             ||X|||||||||||||X|||
T:               ------------CCaTGGCCAGCGCCAGgGTG------------------
R:         13   T221333022103200310301233301220110031323333211302.0    32        
--
>234_3288_1481_F3	ENSMUST00000113126	-	2603	2622	19	38	50	160	2x11x7	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                   ||X||||||||||X||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCA------------
R:         19   T023302012303103023321201111011120111213302330222.1    38        
--
>235_509_1321_F3	ENSMUST00000113126	-	2595	2622	19	46	50	180	2x13x4x2x2x5	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                   ||X||||||||||||X|||X|X|X||||
T:               ------------------AGaGGTGTGGTGTGGtGTCaGgGtGCTG----
R:         19   T02230201230310312332320111101111001122220013212.3.    46        
--
>235_821_4498_F3	ENSMUST00000113126	-	2604	2622	19	37	50	170	2x17	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                   ||X||||||||||||||||
T:               ------------------AGaGGTGTGGTGTGGTGTC-------------
R:         19   T02130201030310302332320111101111011120223322303.2.    37        
--
>235_1182_1403_F3	ENSMUST00000113126	-	2606	2624	16	34	50	170	4x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                                ||||X||||||||||||||
T:               ---------------ACAGaGGTGTGGTGTGGTG----------------
R:         16   T23102010302303231123201111011110110301320003310.1.    34        
--
>235_1753_1791_F3	ENSMUST00000113126	+	2605	2626	23	44	50	166	12x5C4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       ||||||||||||X|||| ||||
T:               ----------------------ACACCACACCACaCCTCCGTCT------
R:         23   T23102010321001000323201111011110113102203122220.3.    44        
--
>235_1849_3526_F3	ENSMUST00000113126	+	2605	2624	23	42	50	180	16x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                       ||||||||||||||||X|||
T:               ----------------------ACACCACACCACACCTcTGT--------
R:         23   T23332010000101001223201111011110111102021102030.0.    42        
--
>235_2367_3143_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T02110201030313312312320111101112011121220002033.0.    39        
--
>235_3296_2154_F3	ENSMUST00000113126	-	2601	2626	14	39	50	200	1x4x18x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                              |X|||X|||||||||||||||||X||
T:               -------------AgACAgAGGTGTGGTGTGGTGTCaGG-----------
R:         14   T23302010300001121112201111011110111202022033232.3.    39        
--
>235_3366_2706_F3	ENSMUST00000113126	+	2585	2623	3	41	50	216	2x4x1x5x1x3x1G5x16	
G:       2585    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                   ||X|||XX||||XX||X |||||X|||||||||||||||
T:               --GCaAGGtaCCCAgcACcGTGACAcCACACCACACCTCTG---------
R:          3   T13333020301001311123112112011110111102221333230.1.    41        
--
>235_3544_1037_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201230310312332320111101112011121213003322.2.    39        
--
>235_3903_2513_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T21102010311031020123203111011110111212321012132.1.    38        
--
>235_4023_3703_F3	ENSMUST00000113126	-	2602	2623	18	39	50	160	1x2x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |X|X||||||||||X|||||||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T02330201330310112332320111101112011121213112303.0.    39        
--
>235_4120_3650_F3	ENSMUST00000113126	-	2595	2623	15	43	50	176	3C2x8x10x1x4	
G:       2623    ATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATCC    2595      
                               ||| ||X|||||||X|||||||||XX|||
T:               --------------CAGCGGtGTGGTGTgGTGTCAGGGtgCTG-------
R:         15   T20221032010112312330311101112011121200323211322.3.    43        
--
>236_763_3067_F3	ENSMUST00000113126	-	2592	2620	21	49	50	210	11x10x1x3x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                                     |||||||||||X|||||||||XX||X|||
T:               --------------------AGGTGTGGTGTgGTGTCAGGGtgCTgGGT-
R:         21   T02331001130310312332320111101112011121200233200012    49        
--
>236_1208_2476_F3	ENSMUST00000113126	-	2597	2620	19	42	50	200	3x8x13	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||X||||||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGTGC--------
R:         19   T21120103031310231232021110111201112120011302000133    42        
--
>236_1510_3063_F3	ENSMUST00000113126	+	1605	1631	20	46	50	176	2x3C2x13x6	
G:       1605    CCAGAAGGAGAAGAAATCAGGGCAGCAGTGACACTGGCCTCTAGTCTGGT    1631      
                                    ||X|| ||X||||||||||||X|||||
T:               -------------------GGgCACCAgTGACACTGGCCTcTAGTC----
R:         20   T23302213023103023223023110111121112103021232120310    46        
--
>236_3409_3332_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	3x8x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||X|||||||X|||||||||
T:               --------------------AGGtGTGGTGTgGTGTCAGGG---------
R:         21   T13130201030310312332320311101112011121200332101323    41        
--
>236_3454_4538_F3	ENSMUST00000113126	-	2594	2623	18	47	50	166	1x13x2x4x4G2x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                  |X||||||||||||X|X|||X||| ||X||
T:               -----------------CaGAGGTGTGGTGTgGtGTCaGGGGGCtGG---
R:         18   T02330201030310212332220111101112031123200003310130    47        
--
>236_3707_3243_F3	ENSMUST00000113126	-	2598	2628	11	41	50	196	2x3x3x3A7x12	
G:       2628    AATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                           ||X||X||X|| |||||||X|||||||||||
T:               ----------GTaGAcAGaGGAGTGGTGTgGTGTCAGGGTG---------
R:         11   T20020010033122231232022110111201112120011020330112    41        
--
>237_552_3147_F3	ENSMUST00000113126	+	2594	2620	12	38	50	176	1x7x2T12x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                            |X||||||X| ||||||||||||X|||
T:               -----------CcAGCACCcTTACACCACACCACaCCT------------
R:         12   T21300102031311231103203111011110113102300000301101    38        
--
>237_1045_1741_F3	ENSMUST00000113126	-	2600	2617	23	40	50	160	14x4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                       ||||||||||||||X|||
T:               ----------------------TGTGGTGTGGTGTCaGGG----------
R:         23   T23122010320033020113203111011110111222000002231321    40        
--
>237_1138_2404_F3	ENSMUST00000113126	-	2596	2627	14	45	50	192	2x2T2x15x6C3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X| ||X||||||||||||||X||||| |||
T:               -------------TAgATAGaGGTGTGGTGTGGTGtCAGGGCGCT-----
R:         14   T02110201030310312332020111101111011021200333232323    45        
--
>237_1509_4382_F3	ENSMUST00000113126	-	2593	2626	14	47	50	200	1x2x3x3x14x4x3x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                              |X|X||X||X|||||||||||||X|||X||X|||
T:               -------------AgAcAGaGGtGTGGTGTGGTGTCaGGGtGCtGGG---
R:         14   T10302010300001020123203111011110111202003133100312    47        
--
>237_1601_2826_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201330310312232320111101112011121220032111120    39        
--
>237_1604_2825_F3	ENSMUST00000113126	-	2595	2620	21	46	50	180	11x6x4x2x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X|||||X|||X|X||
T:               --------------------AGGTGTGGTGTgGTGTCaGGGtGcTG----
R:         21   T02130201030310312332320111101112011122200010212331    46        
--
>237_1730_2538_F3	ENSMUST00000113126	+	2602	2625	20	43	50	200	2x19x3	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                    ||X||||||||||||||||||X||
T:               -------------------CTgACACCACACCACACCTCTgTC-------
R:         20   T10100013320201020123202111011110111102222120022122    43        
--
>237_2242_2792_F3	ENSMUST00000113126	-	2595	2625	13	43	50	196	2x3x1C14x5x5	
G:       2625    ATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATCC    2595      
                             ||X||X ||||||||||||||X||||X||||
T:               ------------GAcAGaCGTGTGGTGTGGTGTcAGGGtGCTG-------
R:         13   T30221030010102312313111101111011111200213213222030    43        
--
>237_2648_2360_F3	ENSMUST00000113126	-	2599	2627	22	50	50	170	2x2x3x3x10x2x7	
G:       2627    GAAAGAAAGAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGT    2599      
                                      ||X|X||X||X|||||||||X|X||||||
T:               ---------------------TAgAcAGaGGtGTGGTGTGGtGtCAGGGT
R:         22   T10011210113302010003133123123203111011110213212001    50        
--
>237_2750_2364_F3	ENSMUST00000113126	-	2596	2623	19	46	50	180	3x2x1x13x6x3	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAA    2596      
                                   |||X|XX||||||||||||X|||||X||
T:               ------------------CAGaGgtGTGGTGTGGTGTcAGGGTgCT----
R:         19   T22233022123003310231202131110111101110120012322220    46        
--
>237_2827_4605_F3	ENSMUST00000113126	-	2601	2627	13	39	50	190	1x6x3x12x5	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                             |X|||||X||X|||||||||||X||||
T:               ------------TaGACAGaGGtGTGGTGTGGTGtCAGG-----------
R:         13   T30102010301031221123202111011110113212013213221213    39        
--
>237_2863_863_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	16x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       ||||||||||||||||X||
T:               ----------------------ACACCACACCACACCTcTG---------
R:         23   T23201010303103312223203111011110111102321033102212    41        
--
>237_2929_5050_F3	ENSMUST00000113126	-	2587	2614	17	44	50	186	x9x9C5x4	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTTTCAAAG    2587      
                                 X||||||||X|||||||| |||||X|||
T:               ----------------gGTGTGGTGtCAGGGTGCCGGGTAcCTT------
R:         17   T00133031111222232011110113212001130300130020202332    44        
--
>237_3017_1825_F3	ENSMUST00000113126	+	2601	2621	19	39	50	170	1x3x17	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                   |X||X||||||||||||||||
T:               ------------------CcTGaCACCACACCACACCTC-----------
R:         19   T23102010003103022113213111011110111102231031112220    39        
--
>237_3998_3395_F3	ENSMUST00000113126	-	2603	2623	20	40	50	156	x3C17	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAA    2603      
                                    X|| |||||||||||||||||
T:               -------------------cAGCGGTGTGGTGTGGTGTCA----------
R:         20   T32123302210300331033123301111011110111213223001023    40        
--
>238_1370_1696_F3	ENSMUST00000113126	-	2604	2620	21	37	50	170	17	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                     |||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTC-------------
R:         21   T02130201030310312332320111101111011123320033323321    37        
--
>238_1815_2094_F3	ENSMUST00000113126	+	2601	2621	19	39	50	170	1x2x18	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                   |X|X|||||||||||||||||
T:               ------------------CcTgACACCACACCACACCTC-----------
R:         19   T33102213320303031023202111011110111102230333101323    39        
--
>238_2220_1920_F3	ENSMUST00000113126	-	2603	2626	12	35	50	180	3x4x2x15	
G:       2626    ATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATCC    2603      
                            |||X|||X|X||||||||||||||
T:               -----------AGAcAGAgGtGTGGTGTGGTGTCA---------------
R:         12   T01021031013122312200311101111011121010311133102300    35        
--
>238_2227_3337_F3	ENSMUST00000113126	-	2600	2623	20	43	50	180	3x11x7x3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                    |||X||||||||||X||||||X||
T:               -------------------CAGaGGTGTGGTGTgGTGTCAgGG-------
R:         20   T12123302010303331033123201111011120111210003222300    43        
--
>238_2584_2987_F3	ENSMUST00000113126	-	90	125	1	36	50	172	2x3G2C2x4x3x2x2x14	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATTG    90        
                 ||X|| || ||X|||X||X|X|X|||||||||||||
T:               CAtTCGTGCGTcATCaCTgGtCaCGTGTGACTGTCG--------------
R:          1   T21102311331313231230222131111212112301003003320333    36        
--
>238_2817_3376_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T23302233300303310313203111011110111202221313221330    41        
--
>239_917_4173_F3	ENSMUST00000113126	-	2598	2620	19	41	50	170	3x8x9x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                                   |||X|||||||X||||||||X||
T:               ------------------AGGtGTGGTGTgGTGTCAGGgTG---------
R:         19   T1212010303131023123203111011120111212031111130212.    41        
--
>239_2564_2896_F3	ENSMUST00000113126	-	2600	2620	23	43	50	170	3x14x4	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                       |||X|||||||||||||X|||
T:               ----------------------AGGtGTGGTGTGGTGTCaGGG-------
R:         23   T1212330201030013103312320311101111011122200331232.    43        
--
>239_2727_1906_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2010201032133102312320311101111011123003121332322.    36        
--
>239_2744_2539_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2110201330103102212320311101111011110223000332130.    39        
--
>239_2873_466_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T0213020103031031233232011110111201112122000330322.    39        
--
>239_3334_3040_F3	ENSMUST00000113126	+	2594	2620	12	38	50	210	7x1x2x17	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                            |||||||XX|X||||||||||||||||
T:               -----------CCAGCACccTgACACCACACCACACCT------------
R:         12   T1300201030330123112320211101111011110232032302302.    38        
--
>239_3353_3067_F3	ENSMUST00000113126	+	1935	1961	21	47	50	190	6x11x4x2x4	
G:       1935    TTAAAGCAAACAAAGAACAAAAGTGTACATTTCTCTTTCTTTCCTTTTAA    1961      
                                     ||||||X||||||||||X|||X|X|||
T:               --------------------AAGTGTaCATTTCTCTTtCTTtCcTTT---
R:         21   T2322001220002202321320211101130022220222012120022.    47        
--
>239_3411_1889_F3	ENSMUST00000113126	-	2602	2631	9	38	50	166	x4C4x2x3x12x4	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                         X||| ||||X|X||X|||||||||||X|||
T:               --------gGTGCAGACaGaGGtGTGGTGTGGTGtCAG------------
R:          9   T2310201030113122102320211101111011021223101013003.    38        
--
>241_732_425_F3	ENSMUST00000113126	-	2604	2629	11	36	50	200	2x2x5x17	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||X|X||||X||||||||||||||||
T:               ----------TGtAgACAGaGGTGTGGTGTGGTGTC--------------
R:         11   T233020103201030211232011110111101112011203302110..    36        
--
>241_944_4812_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T233020103233010211232031110111101112013003122321..    36        
--
>241_991_1366_F3	ENSMUST00000113126	-	2600	2623	19	42	50	160	x3x13x4x4	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAA    2600      
                                   X||X||||||||||||X|||X|||
T:               ------------------cAGaGGTGTGGTGTGGtGTCaGGG--------
R:         19   T002330221030313102312320111101111021120200223000..    42        
--
>241_1148_2744_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x7x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X||||||X||
T:               --------------------AGGTGTGGTGTgGTGTCAgGG---------
R:         21   T310302011303103123323201111011120111210003121223..    41        
--
>241_1259_2388_F3	ENSMUST00000113126	-	2603	2620	21	38	50	180	18	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     ||||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTCA------------
R:         21   T022302013303101121323201111011110111211200023002..    38        
--
>241_1656_1380_F3	ENSMUST00000113126	-	1428	1455	11	38	50	180	8x8x5x2x2x3	
G:       1455    AGAAAACTGAACTCGAAGTACAGGTGCTTGTAGTCATGGGAGAAGAAATC    1428      
                           ||||||||X|||||||X||||X|X|X||
T:               ----------ACTCGAAGtACAGGTGcTTGTaGtCaTG------------
R:         11   T220103021311223202031120111201102223312221211000..    38        
--
>241_1672_1990_F3	ENSMUST00000113126	-	2601	2620	21	40	50	180	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T133302010303102120323201111011120111212020221023..    40        
--
>241_1858_2073_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x7x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X||||||X||
T:               --------------------AGGTGTGGTGTgGTGTCAgGG---------
R:         21   T111302010303101123323201111011120111211002333131..    41        
--
>241_1977_1831_F3	ENSMUST00000113126	-	2599	2620	21	42	50	180	11x8x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                     |||||||||||X|||||||X||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGT--------
R:         21   T023302010303101123323201111011120111212301302233..    42        
--
>241_2157_2770_F3	ENSMUST00000113126	-	2604	2625	15	36	50	186	4T17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||| |||||||||||||||||
T:               --------------GACATAGGTGTGGTGTGGTGTC--------------
R:         15   T233020133230010211332011110111101112023000032303..    36        
--
>241_2232_2127_F3	ENSMUST00000113126	-	2600	2626	15	41	50	190	1x7x9x6x4	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                               |X||||||X||||||||X|||||X|||
T:               --------------AgACAGAGgTGTGGTGTgGTGTCaGGG---------
R:         15   T120302010303101121122231111011120111222000203331..    41        
--
>241_2675_1748_F3	ENSMUST00000113126	-	2600	2623	18	41	50	160	1x2x11x6x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |X|X||||||||||X|||||X|||
T:               -----------------CaGaGGTGTGGTGTgGTGTCaGGG---------
R:         18   T023302013303101123323201111011120111202000023220..    41        
--
>241_3169_4346_F3	ENSMUST00000113126	-	2602	2625	14	37	50	186	2x3C18	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X|| ||||||||||||||||||
T:               -------------GAcAGCGGTGTGGTGTGGTGTCAG-------------
R:         14   T121201030323102312330111101111011121230221333102..    37        
--
>241_3334_2334_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	3x2x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||X|X||X|||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTC--------------
R:         15   T332020103330030213232031110111101112023103023111..    36        
--
>241_3551_2943_F3	ENSMUST00000113126	-	2596	2620	21	45	50	170	11x6x2x2x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||X|X|X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGtGCT-----
R:         21   T023302010303101123323201111011120111222203132002..    45        
--
>241_3758_1105_F3	ENSMUST00000113126	-	2600	2624	24	48	50	170	4x3x12x2x4	
G:       2624    AAAGAAAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGA    2600      
                                        ||||X||X|||||||||||X|X|||
T:               -----------------------ACAGaGGtGTGGTGTGGTGtCaGGG--
R:         24   T202302300320203000013131112320311101111011222200..    48        
--
>241_3776_1281_F3	ENSMUST00000113126	-	1174	1199	5	30	50	160	4x8x2x6x1x5	
G:       1199    GAGGCTTGTAATGGTGGCTGCTAAGCATATCTGCCTGGCAGTCCCAGCAA    1174      
                     ||||X|||||||X|X|||||XX||||
T:               ----CTTGtAATGGTGgCtGCTAAgcATAT--------------------
R:          5   T313302010303101123113230111333123133233001002130..    30        
--
>242_670_3937_F3	ENSMUST00000113126	-	2602	2623	26	47	50	170	x6x16	
G:       2623    GAAAGAAAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTG    2602      
                                          X|||||X|||||||||||||||
T:               -------------------------cAGAGGtGTGGTGTGGTGTCAG---
R:         26   T103203311133020100011021001222031110111101.121213.    47        
--
>242_1715_3736_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x3x15	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||X||||||||||||||
T:               ---------------GAcAGaGGtGTGGTGTGGTGTCA------------
R:         16   T233002010303133120123203111011110111213223.231303.    38        
--
>242_2117_3862_F3	ENSMUST00000113126	-	2070	2099	9	38	50	200	1x8x1x2x7x11	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X|||||||XX|X||||||X||||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAATC------------
R:          9   T001330311112222320111101112220001130320213.213002.    38        
--
>242_2635_4956_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T001330311112022320111101112323001130012010.332130.    36        
--
>242_3281_3235_F3	ENSMUST00000113126	-	2601	2627	14	40	50	170	2x2x3x11x2x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                              ||X|X||X||||||||||X|X||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGtGTCAGG----------
R:         14   T133302010303103123123201111011120311212013.302103.    40        
--
>243_1365_1840_F3	ENSMUST00000113126	-	1924	1960	7	43	50	170	2x2x3x1x3x2x3x1x3x10x7	
G:       1960    GACCTGAAGGAAAGAAAGAGAAATGTACACTTTTGTTCTTTGTGCCTGGT    1924      
                       ||X|X||XX||X|X||XX||X|||||||||X||||||
T:               ------AAgGaAAgaAAgAgAAatGTaCACTTTTGTtCTTTGT-------
R:          7   T23102010301001000123203111011120001112200113322302    43        
--
>243_1746_6_F3	ENSMUST00000113126	-	2072	2099	9	36	50	200	1x8x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111222232011110111232000113000230333331220    36        
--
>243_1818_3261_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302210301303001123203111011110111202333112023332    36        
--
>243_3686_4220_F3	ENSMUST00000113126	-	2313	2334	29	50	50	160	10x2x5x5	
G:       2334    CAGGACCTCATCGGGCTCATCTGTTGGCTGTCACACTATATTACCAGCAC    2313      
                                             ||||||||||X|X||||X||||
T:               ----------------------------TGTCACACTAtAtTACCaGCAC
R:         29   T10030201030310312232320311100112111123032031032311    50        
--
>244_1026_512_F3	ENSMUST00000113126	+	759	780	14	35	50	166	5C13x3	
G:        759    TATTGCTGAGGATGATGGGGAGGTCGACACGGATTTTCCGCCACTGGATT    780       
                              ||||| |||||||||||||X||
T:               -------------GATGGCGAGGTCGACACGGaTT---------------
R:         14   T00133031111232231033220123211130130100300302123200    35        
--
>245_473_2754_F3	ENSMUST00000113126	-	721	750	5	34	50	180	4x6x11x1x1x2x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    721       
                     ||||X|||||X||||||||||XXX|X||||
T:               ----CAATaTGCAGgCAGTAGGCACtgaCaTTGT----------------
R:          5   T00020103031312231213203111011230113101220112221200    34        
--
>245_922_3952_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	7x11	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||X||||||||||
T:               ----------------------ACACCACaCCACACCTCT----------
R:         23   T23302013321202301323203111011310111102220331321100    40        
--
>245_1140_1639_F3	ENSMUST00000113126	-	2591	2624	16	49	50	180	1x3x3x14x2x2x1x5x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                                |X||X||X|||||||||||||X|X|XX||||X||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCaGgGtgCTGGgTA-
R:         16   T23302010301331013123203111011110111232303232103133    49        
--
>245_2068_1196_F3	ENSMUST00000113126	+	2594	2622	12	40	50	176	3x1x3x1x2T18	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||XX||XX| ||||||||||||||||||
T:               -----------CCAgcACccTTACACCACACCACACCTCT----------
R:         12   T23102010301301021123203111011110111102223103100322    40        
--
>245_2739_2027_F3	ENSMUST00000113126	+	2593	2621	11	39	50	162	3C1x3x1x2T17	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                           ||| |X||XX| |||||||||||||||||
T:               ----------CCCCGcACccTTACACCACACCACACCTC-----------
R:         11   T23102010302000301123203111011110111102232133203032    39        
--
>245_3860_3966_F3	ENSMUST00000113126	-	2596	2623	14	41	50	180	3x3x12x2x2x6	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATCCC    2596      
                              |||X||X|||||||||||X|X|X|||||
T:               -------------CAGaGGtGTGGTGTGGTGtCaGgGTGCT---------
R:         14   T22010303131123123203111011110110202301132323310132    41        
--
>246_2736_1721_F3	ENSMUST00000113126	-	2596	2622	19	45	50	176	2x11x5x5C3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                   ||X||||||||||X||||X|||| |||
T:               ------------------AGaGGTGTGGTGTgGTGTcAGGGCGCT-----
R:         19   T31130201030310112032320111101112011101200333230321    45        
--
>246_4071_1631_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02130201030310112312320111101112011121220323000000    39        
--
>247_636_4169_F3	ENSMUST00000113126	-	2604	2623	20	39	50	160	3x3x14	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAA    2604      
                                    |||X||X|||||||||||||
T:               -------------------CAGaGGtGTGGTGTGGTGTC-----------
R:         20   T12123302010303331033123203111011110111232320322132    39        
--
>247_1684_2908_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T30230201030310112332320111101112011121230312013202    39        
--
>247_2771_4699_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	2x3x3x11x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X||||||||||X||||
T:               --------------GAcAGaGGtGTGGTGTGGTgTCAG------------
R:         15   T23302010301331323123203111011110131212203310222201    38        
--
>247_2986_3955_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	5x9x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||||X||||||||X||||||
T:               -----------------CAGAGgTGTGGTGTgGTGTCA------------
R:         18   T02130201030320312312223111101110011121323322133331    38        
--
>247_3698_3048_F3	ENSMUST00000113126	+	2610	2627	23	40	50	160	10x8	
G:       2610    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2627      
                                       ||||||||||X|||||||
T:               ----------------------ACACCACACCtCTGTCTA----------
R:         23   T23203010313102223233203111011110122112233030022002    40        
--
>248_699_4501_F3	ENSMUST00000113126	+	1542	1569	15	42	50	166	3A2x5x1x4x12	
G:       1542    GAGCTGATTATCTTGCTCAAAAACAAAGAAAACTGAACAGGCGAACAAGC    1569      
                               ||| ||X||||XX|||X|||||||||||
T:               --------------GCTAAAaAACAaaGAAaACTGAACAGGC--------
R:         15   T00133031111212232300100113222030121201120322332310    42        
--
>248_2347_2576_F3	ENSMUST00000113126	+	2586	2620	4	38	50	162	3x2x1C4x4x1x2T8x8	
G:       2586    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                    |||X|X ||||X|||XX| ||||||||X|||||||
T:               ---CAAgGtCCCCAgCACccTTACACCACAcCACACCT------------
R:          4   T23301010320001031123203111011130111102323332332201    38        
--
>248_2521_628_F3	ENSMUST00000113126	-	2604	2627	14	37	50	166	2x2T2x17	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                              ||X| ||X||||||||||||||||
T:               -------------TAgATAGaGGTGTGGTGTGGTGTC-------------
R:         14   T02130201230310312332020111101111011122113203330211    37        
--
>248_2528_3590_F3	ENSMUST00000113126	-	2600	2620	21	41	50	190	11x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGGG---------
R:         21   T31130201230310112332320111101112011121200203231113    41        
--
>248_2640_1568_F3	ENSMUST00000113126	-	2601	2622	19	40	50	180	2x11x9	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                   ||X||||||||||X||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGG----------
R:         19   T31330201030310312302320111101112011121203103022300    40        
--
>248_2644_3229_F3	ENSMUST00000113126	-	2596	2620	21	45	50	190	11x8x3x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||||X||X||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGTgCT-----
R:         21   T02130201030310312332320111101112011121220123222103    45        
--
>248_3227_4056_F3	ENSMUST00000113126	-	2604	2627	13	36	50	160	2x2x3x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X|X||X||X|||||||||||||
T:               ------------TAgAcAGaGGtGTGGTGTGGTGTC--------------
R:         13   T23302010333133323123203111011110111231203131331212    36        
--
>249_877_209_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201230310312332320111101112011121223303202111    39        
--
>249_2173_4586_F3	ENSMUST00000113126	-	2599	2623	18	42	50	190	1x13x8x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |X||||||||||||X|||||||X||
T:               -----------------CaGAGGTGTGGTGTgGTGTCAGgGT--------
R:         18   T31320201030310212232220111101112011121220123000103    42        
--
>249_2221_3057_F3	ENSMUST00000113126	-	2596	2627	14	45	50	192	2x2T2x11x10C3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X| ||X||||||||||X||||||||| |||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAGGGCGCT-----
R:         14   T02330201030310312332320111101112011121200333222233    45        
--
>249_2873_3382_F3	ENSMUST00000113126	-	2596	2623	20	47	50	180	3x15x1x3x3x3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                    |||X||||||||||||||XX||X||X||
T:               -------------------CAGaGGTGTGGTGTGGTGtcAGgGTgCT---
R:         20   T12223302010300031333123201111011110113312201332330    47        
--
>249_3598_3701_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T02333031111222232011110111232000133203320311312023    33        
--
>249_3725_2357_F3	ENSMUST00000113126	-	2602	2623	20	41	50	180	3x3x16	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |||X||X|||||||||||||||
T:               -------------------CAGaGGtGTGGTGTGGTGTCAG---------
R:         20   T02123302210300331033123203111011110111212333202033    41        
--
>250_365_3423_F3	ENSMUST00000113126	+	2593	2620	11	38	50	166	4x4x1x2T13x3	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                           ||||X|||XX| |||||||||||||X||
T:               ----------CCCAgCACccTTACACCACACCACAcCT------------
R:         11   T2310201032000133112320311101111011130230320032232.    38        
--
>250_575_742_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x6x11x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X|||||X||||||||||X|||
T:               --------------GAcAGAGGtGTGGTGTGGTgTCA-------------
R:         15   T2110201330130132212220311101111013121010331023203.    37        
--
>250_654_159_F3	ENSMUST00000113126	-	2599	2620	21	42	50	180	11x8x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                     |||||||||||X|||||||X||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGT--------
R:         21   T2213020103031011233232011110111201112121013232223.    42        
--
>250_693_2449_F3	ENSMUST00000113126	-	2601	2624	16	39	50	160	1x3x3x10x7	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                |X||X||X|||||||||X||||||
T:               ---------------AcAGaGGtGTGGTGTGGtGTCAGG-----------
R:         16   T2110101030000103312320311101111001121203323231221.    39        
--
>250_741_1098_F3	ENSMUST00000113126	-	332	366	10	44	50	196	3x1x10x7x1x1G2x9	
G:        366    AGACCTCACGAATATTTTTGCATTTGATCTGGTTTTGTCTCTCTGCCACA    332       
                          |||XX|||||||||X||||||XX ||X||||||||
T:               ---------GAAtaTTTTTGCATtTGATCTggGTTtGTCTCTCT------
R:         10   T0203021223202030000131330123223101011122222232121.    44        
--
>250_761_3760_F3	ENSMUST00000113126	-	2597	2622	18	43	50	166	2x3x13x4A3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                  ||X||X||||||||||||X||| |||
T:               -----------------AGaGGtGTGGTGTGGTGTcAGGATGC-------
R:         18   T2010101030000132122320311101111011111202313322230.    43        
--
>250_1132_2926_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030320132112320311101111011120223323022230.    36        
--
>250_1339_3831_F3	ENSMUST00000113126	+	2602	2621	20	39	50	180	16x4	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    ||||||||||||||||X|||
T:               -------------------CTGACACCACACCACAcCTC-----------
R:         20   T2310201030330333332321211101111011130220313303333.    39        
--
>250_1859_1016_F3	ENSMUST00000113126	-	2601	2620	20	39	50	180	15x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||||||||||||||X||||
T:               -------------------AGGTGTGGTGTGGTGtCAGG-----------
R:         20   T0100221333001301022320111101111011221202022233121.    39        
--
>250_2077_3145_F3	ENSMUST00000113126	-	2602	2625	15	38	50	166	2x3C2x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X|| ||X|||||||||||||||
T:               --------------GAcAGCGGtGTGGTGTGGTGTCAG------------
R:         15   T2312201030303302012330311101111011121233030033232.    38        
--
>250_2207_2544_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	x18x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       X|||||||||||||||||X|||
T:               ----------------------aCACCACACCACACCTCTgTCT------
R:         23   T3310201030230133002320311101111011110222312222222.    44        
--
>250_2378_972_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	2x5x3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             ||X||||X||X||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGT---------------
R:         13   T2312201030130332112320311101111011131120032313000.    35        
--
>250_2798_336_F3	ENSMUST00000113126	-	2601	2627	13	39	50	170	2x1x4x15x1x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                             ||XX|||X||||||||||||||XX|||
T:               ------------TAgaCAGaGGTGTGGTGTGGTGtcAGG-----------
R:         13   T2310201030000303112320111101111011011201313302003.    39        
--
>250_2900_798_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	1x3x3x16	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                |X||X||X|||||||||||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCAG------------
R:         16   T2330201030130131212320311101111011121222032332101.    38        
--
>250_2930_2704_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T2310231332000302112320311101111011130311223323211.    35        
--
>250_2935_905_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T0233020103031021203232011110111201112123020323011.    39        
--
>250_3167_2417_F3	ENSMUST00000113126	+	2589	2622	7	40	50	172	2x1x5x2x1T1x2T18	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                       ||XX||||X|X |X| ||||||||||||||||||
T:               ------GGtaCCCAgCaTCcTTACACCACACCACACCTCT----------
R:          7   T2330201030100103232320311101111011110222313332212.    40        
--
>250_3169_3534_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T0013303111122223201111011123220011300322001223123.    36        
--
>250_3613_4222_F3	ENSMUST00000113126	-	2595	2622	19	46	50	180	2x11x6x2x4x3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                   ||X||||||||||X|||||X|X|||X||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGgGTGcTG----
R:         19   T0213020103031031232232011110111201112023011121113.    46        
--
>250_4059_1883_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	4x3x13x2x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                ||||X||X||||||||||||X|X||
T:               ---------------ACAGaGGtGTGGTGTGGTGTcAgGG----------
R:         16   T1110101032030101112320311101111011101000332320020.    40        
--
>250_4108_1319_F3	ENSMUST00000113126	+	1639	1664	10	35	50	166	6G3x2x2x12	
G:       1639    TCTGGTGCCACAGCCCAGGTGGCCTGCAAGGCCAGGTGGACCGGAGTCCA    1664      
                          |||||| |||X|X|X|||||||||||
T:               ---------ACAGCCGAGGtGgCcTGCAAGGCCAG---------------
R:         10   T3201030213112303220311312131020301230300131212232.    35        
--
>250_4119_106_F3	ENSMUST00000113126	-	2603	2620	19	36	50	160	3x15	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                                   |||X||||||||||||||
T:               ------------------AGGtGTGGTGTGGTGTCA--------------
R:         19   T2332010303131023123203111011110111210303121221222.    36        
--
>250_4134_2811_F3	ENSMUST00000113126	-	2593	2620	21	48	50	186	11x8x2A2x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                     |||||||||||X|||||||X| ||X|||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGAGCtGGG--
R:         21   T0233020103031011233232011110111201112121022331003.    48        
--
>251_341_4450_F3	ENSMUST00000113126	-	2591	2629	11	49	50	188	3G2T2x3x13x3T3x2x5	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                           ||| || ||X||X||||||||||||X|| |||X|X||||
T:               ----------TGTGGATAGaGGtGTGGTGTGGTGTcAGTGTGcTgGGTA-
R:         11   T10002010323111023323203111011110111312111122000133    49        
--
>251_523_1732_F3	ENSMUST00000113126	-	2597	2620	20	43	50	180	3x14x3x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X|||||||||||||X||X|||
T:               -------------------AGGtGTGGTGTGGTGTCaGGgTGC-------
R:         20   T23102010301003030323203111011110111202031130022132    43        
--
>251_815_4928_F3	ENSMUST00000113126	-	718	753	2	37	50	220	1x2x3x7x11x1x4x7	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                  |X|X||X||||||X||||||||||XX|||X||||||
T:               -CaGcAAtATGCAGgCAGTAGGCACtgACAtTGTCAT-------------
R:          2   T20020102331312231213203111021110112131111303320112    37        
--
>251_833_1648_F3	ENSMUST00000113126	-	2599	2623	19	43	50	170	x6x10x2x7	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAA    2599      
                                   X|||||X|||||||||X|X||||||
T:               ------------------cAGAGGtGTGGTGTGGtGtCAGGGT-------
R:         19   T21133021103003311331222031110111102132120010301213    43        
--
>251_1109_2147_F3	ENSMUST00000113126	-	2599	2620	19	40	50	180	3x8x11	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X|||||||X||||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGT----------
R:         19   T13020103031310231232031110111201112120013131311201    40        
--
>251_1276_3028_F3	ENSMUST00000113126	+	2605	2620	23	38	50	160	16	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                       ||||||||||||||||
T:               ----------------------ACACCACACCACACCT------------
R:         23   T23102013321003000023203111011110111102320223023022    38        
--
>251_1359_2830_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x2x3x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||X||||||||||X|||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T12230201030310312312020111101112011121222300132222    39        
--
>251_2578_3573_F3	ENSMUST00000113126	-	2602	2617	23	38	50	160	16	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                       ||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAG------------
R:         23   T23302010333301021323203111011110111212322302001313    38        
--
>251_2721_1013_F3	ENSMUST00000113126	-	87	125	1	39	50	182	1x5x2C2A3x3x2x2x13x4	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    87        
                 |X||||X| || |||X||X|X|X||||||||||||X|||
T:               CaTTCCtGCGTAATCaCTgGtCaCGTGTGACTGTCgAAT-----------
R:          1   T23302011331303231230222131111212112220310123002122    39        
--
>251_3062_4519_F3	ENSMUST00000113126	-	2956	2983	14	41	50	160	x3x7x9x1x2x6	
G:       2983    TTAAAGAGACTGGTGAATATGTGACAAGATTTAATGACCAAATCCAACTA    2956      
                              X||X||||||X||||||||XX|X|||||
T:               -------------tGAaTATGTGaCAAGATTTaaTgACCAA---------
R:         14   T11010303131123123333111111022300013321010332231301    41        
--
>251_3501_572_F3	ENSMUST00000113126	-	2595	2620	19	44	50	180	3x8x10x1x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                                   |||X|||||||X|||||||||XX|||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGtgCTG------
R:         19   T13020103031310231232031110111201112120003321302233    44        
--
>252_141_2156_F3	ENSMUST00000113126	-	2605	2633	7	35	50	190	1x3x2x7x3x13	
G:       2633    AAATTCCTGGTGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                       |X||X|X||||||X||X||||||||||||
T:               ------CtGGtGtAGACAGaGGtGTGGTGTGGTGT---------------
R:          7   T33102010100103221123202111011110111102130212220032    35        
--
>252_141_2156_F3	ENSMUST00000113126	+	2594	2620	12	38	50	170	2x2x3x1x2x17	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                            ||X|X||XX|X||||||||||||||||
T:               -----------CCaGcACccTgACACCACACCACACCT------------
R:         12   T33102010100103221123202111011110111102130212220032    38        
--
>252_268_2250_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T23102010301003321123203111011110111101302020232332    35        
--
>252_850_290_F3	ENSMUST00000113126	-	2595	2625	16	46	50	176	2x3x12x2x4x1A6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                ||X||X|||||||||||X|X|||X ||||||
T:               ---------------GAcAGaGGTGTGGTGTGgTgTCAgAGTGCTG----
R:         16   T02130201330310112312320111101111313121022113212021    46        
--
>252_1404_2719_F3	ENSMUST00000113126	-	2600	2627	14	41	50	180	2x2x3x3x8x10	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X|X||X||X|||||||X|||||||||
T:               -------------TAgAcAGaGGtGTGGTGTgGTGTCAGGG---------
R:         14   T02220201030310312312320311101112011121200221302123    41        
--
>252_1491_4503_F3	ENSMUST00000113126	-	2597	2622	19	44	50	180	2x11x6x2x5	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                   ||X||||||||||X|||||X|X||||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGgGTGC------
R:         19   T31030201230310302032320111101112011120230113300322    44        
--
>252_2454_3827_F3	ENSMUST00000113126	-	2601	2617	23	39	50	170	17	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                       |||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAGG-----------
R:         23   T01022010320111012223202111011110111212030200221221    39        
--
>252_2882_1721_F3	ENSMUST00000113126	-	80	112	14	46	50	210	2x3x2x2x13x6x5	
G:        112    CTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    80        
                              ||X||X|X|X||||||||||||X|||||X||||
T:               -------------TCaCTgGtCaCGTGTGACTGTCgAATATgAGCT----
R:         14   T13020100031311231230222131111212112120333322322120    46        
--
>252_3046_2232_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	3x16	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||X|||||||||||||||
T:               --------------------AGGtGTGGTGTGGTGTCAG-----------
R:         21   T02330201230310312332320311101111011121213333300320    39        
--
>252_3177_1717_F3	ENSMUST00000113126	-	2598	2620	20	42	50	170	3x13x1x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                    |||X||||||||||||XX|||||
T:               -------------------AGGtGTGGTGTGGTGTcaGGGTG--------
R:         20   T23102013303001011323203111011110111332001102332000    42        
--
>252_3668_1946_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x14x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||X|||
T:               -------------------AGGtGTGGTGTGGTGTCaGGG----------
R:         20   T23302010301003032013203111011110111202000232203002    40        
--
>252_4270_1432_F3	ENSMUST00000113126	-	730	750	5	25	50	190	10x11	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||||||||X||||||||||
T:               ----CAATATGCAGgCAGTAGGCAC-------------------------
R:          5   T13202103331312331213203111001210102220233111123002    25        
--
>253_1431_4678_F3	ENSMUST00000113126	-	2597	2627	14	44	50	176	2x2T13x4x2x3x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                              ||X| |||||||||||||X|||X|X||X|||
T:               -------------TAgATAGAGGTGTGGTGTgGTGtCaGGgTGC------
R:         14   T02330201030310312332220111101112011020201113031210    44        
--
>253_1907_4458_F3	ENSMUST00000113126	-	2597	2625	16	44	50	190	5x11x6x2x2x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                |||||X||||||||||X|||||X|X|X||
T:               ---------------GACAGaGGTGTGGTGTgGTGTCaGgGtGC------
R:         16   T00130201330310312112320111101112011120230013323322    44        
--
>253_2118_2864_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T02330201030310112232320111101112011121230312202212    39        
--
>253_2468_3856_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x7x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X||||||X||
T:               --------------------AGGTGTGGTGTgGTGTCAgGG---------
R:         21   T02330201030310112332320111101112011121300012303322    41        
--
>253_2476_2284_F3	ENSMUST00000113126	-	2601	2620	21	40	50	180	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T11130201030310112332320111101112011121203303222210    40        
--
>253_3342_2497_F3	ENSMUST00000113126	-	2596	2627	13	44	50	186	2x4x1x3x14x3A4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                             ||X|||XX||X|||||||||||||X|| ||||
T:               ------------TAgACAgaGGtGTGGTGTGGTGTCaGGATGCT------
R:         13   T23102210301303021113203111011110111202023132033302    44        
--
>254_538_3727_F3	ENSMUST00000113126	-	2591	2614	17	40	50	180	x6x11x7	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                 X|||||X||||||||||X||||||
T:               ----------------gGTGTGgTGTCAGGGTGcTGGGTA----------
R:         17   T00133031111222232011113111212001122100133131102232    40        
--
>254_2072_4892_F3	ENSMUST00000113126	-	2218	2237	30	49	50	160	14x1x5	
G:       2237    GAGGATGATGGGGAGGTCGACACGGATTTCGCACCCACGCATGCACTTAA    2218      
                                              ||||||||||||||XX||||
T:               -----------------------------CGCACCCACGCATGcaCTTA-
R:         30   T01220103031311231231021110311033110011331312312033    49        
--
>254_2348_2970_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	2x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  ||X||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTC--------------
R:         18   T01001013302111322223201111011110111221233122132131    36        
--
>254_2808_2855_F3	ENSMUST00000113126	-	2602	2623	20	41	50	180	3x3x16	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |||X||X|||||||||||||||
T:               -------------------CAGaGGtGTGGTGTGGTGTCAG---------
R:         20   T12323302010303131033123203111011110111212203322303    41        
--
>254_3122_1706_F3	ENSMUST00000113126	-	2596	2627	14	45	50	186	2x2T2x11x6x2x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X| ||X||||||||||X|||||X|X|||||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCaGgGTGCT-----
R:         14   T02330201030310312332320111101112011123230113222232    45        
--
>255_2696_3315_F3	ENSMUST00000113126	-	2595	2621	19	45	50	190	1x3x14x4x5	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                   |X||X|||||||||||||X|||X||||
T:               ------------------GaGGtGTGGTGTGGTGTCaGGGtGCTG-----
R:         19   T23103013320300002113203111011110111202003132132000    45        
--
>255_3525_3439_F3	ENSMUST00000113126	-	2596	2620	21	45	50	170	16x1x2x2x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     ||||||||||||||||XX|X|X|||
T:               --------------------AGGTGTGGTGTGGTGTcaGgGtGCT-----
R:         21   T31330201230310312332320111101111011102220313222312    45        
--
>255_3866_4019_F3	ENSMUST00000113126	-	719	752	3	36	50	186	2x3G5x13x1x2x1x6	
G:        752    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                   ||X|| |||||X||||||||||||XX|XX|||||
T:               --AGcAAGATGCAgGCAGTAGGCACTgaCatTGTCA--------------
R:          3   T22320102231310031213203112311000112102203023230311    36        
--
>256_2240_3791_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T00130201330310312332320111101112011121233012223223    39        
--
>257_1373_1380_F3	ENSMUST00000113126	-	2605	2629	11	35	50	170	4x2x3x3x13	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                           ||||X|X||X||X||||||||||||
T:               ----------TGTAgAcAGaGGtGTGGTGTGGTGT---------------
R:         11   T23102013303113323123203111011110111013020321030303    35        
--
>257_2738_1817_F3	ENSMUST00000113126	-	2603	2627	14	38	50	170	2x2x3x11x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X|X||X||||||||||X||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCA------------
R:         14   T31330201030310312312320111101112011121133013130200    38        
--
>257_3254_3566_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	5x3x12x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||X|X||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGG-----------
R:         15   T10302010302321121123203111011110110202023323221212    39        
--
>257_3440_3677_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201230310312332320111101112011121220332331232    39        
--
>257_3489_1117_F3	ENSMUST00000113126	-	2602	2629	12	39	50	180	2x2x2x1x13x8	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X|XX||||||||||||X|||||||
T:               -----------TGtAgAcaGAGGTGTGGTGTgGTGTCAG-----------
R:         12   T02030201230310312232220111101112011121223101300321    39        
--
>257_3615_3759_F3	ENSMUST00000113126	-	2600	2623	16	39	50	180	3x3x8x10	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                |||X||X|||||||X|||||||||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGGG-----------
R:         16   T23220103031310231232031110111201112120003332120233    39        
--
>257_3697_281_F3	ENSMUST00000113126	-	2596	2620	21	45	50	170	11x6x2x2x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||X|X|X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGtGCT-----
R:         21   T02330201030310112332320111101112011120230313203011    45        
--
>258_1038_3143_F3	ENSMUST00000113126	-	2600	2616	25	41	50	170	17	
G:       2616    GAAATTCTAAACAATCAGCCCAGGGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                         |||||||||||||||||
T:               ------------------------GTGGTGTGGTGTCAGGG---------
R:         25   T3212101121110331231320313110111101112120002.231122    41        
--
>258_1225_3203_F3	ENSMUST00000113126	-	2603	2620	20	37	50	180	18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    ||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCA-------------
R:         20   T0100201332101121222320111101111011121321130.201122    37        
--
>258_1239_2104_F3	ENSMUST00000113126	-	2599	2623	14	38	50	170	3x3x11x5x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                              |||X||X||||||||||X||||X||
T:               -------------CAGaGGtGTGGTGTGGTgTCAGgGT------------
R:         14   T2201030313112312320311101111010121230100033.323303    38        
--
>258_1381_5087_F3	ENSMUST00000113126	-	893	917	1	25	50	156	x12x7A1x4	
G:        917    GGAGAATCCATGAGCAGCATTTATTTTTAACTGTGCCATTTGTTTAAATA    893       
                 X|||||||||||X|||||| |X|||
T:               gGAGAATCCATGaGCAGCAATtATT-------------------------
R:          1   T2022203201311231231031330.112..030..323..22....32.    25        
--
>258_1710_3522_F3	ENSMUST00000113126	-	2599	2623	17	41	50	190	3x3x16x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAGgGT---------
R:         17   T2132201030021102012320311101111011121230121.323312    41        
--
>258_2289_1555_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	x4x3x13x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                X|||X||X||||||||||||X||||
T:               ---------------aCAGaGGtGTGGTGTGGTGTcAGGG----------
R:         16   T1330210032132121112320311101111011131200232.330113    40        
--
>258_2853_3407_F3	ENSMUST00000113126	-	915	939	22	46	50	180	x9x2x14	
G:        939    TTGAACAGGCAGATTACAAAATTGTGTTGTCTACTTGGATAAGGGAATGT    915       
                                      X||||||||X|X|||||||||||||
T:               ---------------------tTGTGTTGTcTaCTTGGATAAGGGA----
R:         22   T0213020133031011233202011110111201201023302.223133    46        
--
>258_2856_2599_F3	ENSMUST00000113126	-	2600	2626	14	40	50	170	1x5x1x2x12x6	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              |X||||XX|X|||||||||||X|||||
T:               -------------AgACAGagGtGTGGTGTGGTGtCAGGG----------
R:         14   T2000201030033102112300311101111011221200312.022333    40        
--
>258_2893_3590_F3	ENSMUST00000113126	-	2601	2620	19	38	50	180	11x9	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |||||||||||X||||||||
T:               ------------------AGGTGTGGTGTgGTGTCAGG------------
R:         19   T1302010303131023123201111011100111212013032.213203    38        
--
>258_3294_2117_F3	ENSMUST00000113126	-	2602	2629	12	39	50	166	2x2x2T2x11x8	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X| ||X||||||||||X|||||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCAG-----------
R:         12   T1103020103031031233232011110111201112121032.320023    39        
--
>258_3382_3320_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T1113020103031011233232011110111201112123002.302132    39        
--
>259_920_1721_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T1303020103031031221232011110111201112122101.2003.3    39        
--
>259_1037_1704_F3	ENSMUST00000113126	-	85	125	1	41	50	156	1x5x2x1x2A3x3x1x1x2x13x1x5	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    85        
                 |X||||X|XX| |||X||XXX|X||||||||||||XX||||
T:               CaTTCCtGtgTAATCaCTggtCaCGTGTGACTGTCgaATAT---------
R:          1   T2330201103130323123332313111121211200033333.1320.3    41        
--
>259_1080_3322_F3	ENSMUST00000113126	+	2603	2623	21	41	50	170	4x1x16	
G:       2603    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                     ||||XX|||||||||||||||
T:               --------------------TGACacCACACCACACCTCTG---------
R:         21   T2333301000020312232311210201111011110222132.0200.2    41        
--
>259_1086_4737_F3	ENSMUST00000113126	-	2602	2627	14	39	50	166	2x2T2x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X| ||X||||||||||X|||||||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T3133020103031031233232011110111201112123032.0321.2    39        
--
>259_1685_4297_F3	ENSMUST00000113126	-	2598	2623	18	43	50	160	1x2x11x6x2x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                  |X|X||||||||||X|||||X|X|||
T:               -----------------CaGaGGTGTGGTGTgGTGTCaGgGTG-------
R:         18   T0023020103031011233232011110111201112023011.0213.1    43        
--
>259_1777_2427_F3	ENSMUST00000113126	-	2601	2629	12	40	50	190	2x2x5x11x6x3	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                            ||X|X||||X||||||||||X|||||X||
T:               -----------TGtAgACAGaGGTGTGGTGTgGTGTCaGG----------
R:         12   T0011020133031031211232011110111201112020230.2120.0    40        
--
>259_2146_2124_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2311201030130130112320311101111011120033122.1133.2    36        
--
>259_2386_1019_F3	ENSMUST00000113126	+	2593	2622	11	40	50	186	1x3x4x1x2T18	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           |X||X|||XX| ||||||||||||||||||
T:               ----------CcCAgCACccTTACACCACACCACACCTCT----------
R:         11   T2312201030030133111320311101111011110222023.2122.2    40        
--
>259_3090_895_F3	ENSMUST00000113126	+	2595	2632	13	50	50	152	2x4x1x2T12x4x2x2x2T5	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                             ||X|||XX| ||||||||||||X|||X|X|X| |||||
T:               ------------CAgCACccTTACACCACACCACaCCTcTgTcTTCACCA
R:         13   T2330200130101133112320311101111011310232010.0211.3    50        
--
>259_3117_787_F3	ENSMUST00000113126	-	2599	2625	16	42	50	190	2x1x13x8x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||XX||||||||||||X|||||||X||
T:               ---------------GAcaGAGGTGTGGTGTgGTGTCAGgGT--------
R:         16   T0232020103031011203222011110111201112122013.3022.0    42        
--
>259_4070_2250_F3	ENSMUST00000113126	-	2601	2623	16	38	50	170	3x3x12x5	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                |||X||X|||||||||||X||||
T:               ---------------CAGaGGtGTGGTGTGGTGtCAGG------------
R:         16   T1122010303131123123203111011110110212010333.0313.2    38        
--
>260_1010_3027_F3	ENSMUST00000113126	-	2600	2619	26	45	50	160	4x6x10	
G:       2619    GAAAGAAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGGAAAA    2600      
                                          ||||X|||||X|||||||||
T:               -------------------------GGTGtGGTGTgGTGTCAGGG-----
R:         26   T00120131220100000013023333011010111301112120030323    45        
--
>260_1334_3467_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121220333311123    39        
--
>260_1472_3932_F3	ENSMUST00000113126	-	2596	2625	15	44	50	186	3x2x3x14G3x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               |||X|X||X||||||||||||| |||X|||
T:               --------------GACaGaGGtGTGGTGTGGTGTCGGGGtGCT------
R:         15   T23303010321231121323203111011110111230000132222232    44        
--
>260_1561_4361_F3	ENSMUST00000113126	-	177	201	26	50	50	176	14x4x2T4	
G:        201    TGAATGCCTCTCTCATTCTGATCTGACCCACTGTCTCCAGGCACTGACGG    177       
                                          ||||||||||||||X|||X| ||||
T:               -------------------------ACCCACTGTCTCCAgGCAcTTACGG
R:         26   T11230201030303312312223313100112112220100312203130    50        
--
>260_1807_2386_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23302010303133323123203111011110111230203220330110    36        
--
>260_1904_2048_F3	ENSMUST00000113126	-	2597	2617	26	46	50	170	16x2x3	
G:       2617    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCAAAA    2597      
                                          ||||||||||||||||X|X||
T:               -------------------------TGTGGTGTGGTGTCAGgGtGC----
R:         26   T30123302210300131033123203111011110111212203130222    46        
--
>260_2127_4809_F3	ENSMUST00000113126	-	2071	2095	12	36	50	170	5x3x12x2x3	
G:       2095    TCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTTG    2071      
                            |||||X||X|||||||||||X|X||
T:               -----------GAGCTcCAaCCACAGCTTTTgTaAT--------------
R:         12   T01030301112322320013101112320003110312211321322121    36        
--
>260_2830_2872_F3	ENSMUST00000113126	-	2596	2620	20	44	50	170	3x12x2x2x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||X|||||||||||X|X|X|||||
T:               -------------------AGGtGTGGTGTGGTGtCaGgGTGCT------
R:         20   T32122011203203022113203111011110113202301132222333    44        
--
>260_3160_1808_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T13102013300301002323203111011110111102212333212321    39        
--
>261_146_641_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x7x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X||||||X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGG---------
R:         18   T0213020103031001231232011110111201112130032110100.    41        
--
>261_296_1834_F3	ENSMUST00000113126	-	2603	2627	14	38	50	176	2x2A13x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X| |||||||||||||X||||||
T:               -------------TAgAAAGAGGTGTGGTGTgGTGTCA------------
R:         14   T3133020103031031200222011110111201112111332231301.    38        
--
>261_478_2436_F3	ENSMUST00000113126	-	2595	2627	13	45	50	170	3x1x3x3x13x2x1x1x6	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                             |||XX||X||X||||||||||||X|XXX|||||
T:               ------------TAGacAGaGGtGTGGTGTGGTGTcAgggTGCTG-----
R:         13   T2330221330300320012320311101111011101032113212303.    45        
--
>261_952_3627_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T1310201032030303031320311101111011121212300311022.    38        
--
>261_1437_2961_F3	ENSMUST00000113126	-	2604	2628	12	36	50	170	1x2x5x3x14	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                            |X|X||||X||X|||||||||||||
T:               -----------GtAgACAGaGGtGTGGTGTGGTGTC--------------
R:         12   T2310101032330302112320311101111011120232313003232.    36        
--
>261_1472_4449_F3	ENSMUST00000113126	-	2596	2624	16	44	50	176	1x3x3x13A3x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                |X||X||X|||||||||||| |||X||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTAAGGgTGCT------
R:         16   T2310201332100300212320311101111011130202113202330.    44        
--
>261_1525_2375_F3	ENSMUST00000113126	-	2599	2620	20	41	50	160	3x13x3x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                    |||X||||||||||||X||X||
T:               -------------------AGGtGTGGTGTGGTGTcAGgGT---------
R:         20   T1330201030300333111320311101111011131230133033103.    41        
--
>261_1987_2750_F3	ENSMUST00000113126	-	2600	2621	23	44	50	180	5x4x13	
G:       2621    AAAGAAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGGAAAAA    2600      
                                       |||||X|||X||||||||||||
T:               ----------------------GAGGTgTGGtGTGGTGTCAGGG------
R:         23   T1221233011130201030303122012110311101112120032033.    44        
--
>261_2763_4931_F3	ENSMUST00000113126	-	2600	2626	15	41	50	176	1x2T2x11x10	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                               |X| ||X||||||||||X|||||||||
T:               --------------AgATAGaGGTGTGGTGTgGTGTCAGGG---------
R:         15   T0213020103031011233232011110111201112120030003001.    41        
--
>261_2813_4343_F3	ENSMUST00000113126	-	2602	2623	16	37	50	160	3x3x8x8	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||X|||||||X|||||||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAG-------------
R:         16   T2112010303131123123203111011130111212113113210103.    37        
--
>261_3020_1929_F3	ENSMUST00000113126	-	2601	2620	20	39	50	180	3x17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||X||||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAGG-----------
R:         20   T2312201130313102311120311101111011121202033322222.    39        
--
>261_3124_2943_F3	ENSMUST00000113126	-	2599	2620	21	42	50	200	11x11	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                     |||||||||||X||||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGGGT--------
R:         21   T3113020103031031233232011110111201112120012123232.    42        
--
>261_3736_1527_F3	ENSMUST00000113126	+	2591	2627	9	45	50	162	1x5x1x3x1x1x1T17x1A4	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                         |X||||XX||XXX |||||||||||||||||X ||||
T:               --------TaCCCAgcACcctTACACCACACCACACCTCtATCTA-----
R:          9   T2310201030100100112330311101111011110223332233133.    45        
--
>261_3763_1106_F3	ENSMUST00000113126	-	2596	2624	16	44	50	190	4x3x12x2x4x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                ||||X||X|||||||||||X|X|||X|||
T:               ---------------ACAGaGGtGTGGTGTGGTGtCaGGGtGCT------
R:         16   T0330201030100130112320311101111011320200013222312.    44        
--
>262_296_1949_F3	ENSMUST00000113126	+	679	714	13	48	50	166	1x5C3x4x1x2x1x2x5x11	
G:        679    TCGGGCTCATCTGTTGGCAGTACACGAGTGAAGGACGGGAGCCGAAGCTC    714       
                             |X|||| |||X|||XX|XX|X||||X||||||||||
T:               ------------GtTGGCCGTAcACGagTgaAgGACGgGAGCCGAAGC--
R:         13   T01123121212303010303133113131010002133022303202330    48        
--
>262_1849_3727_F3	ENSMUST00000113126	-	2592	2622	19	49	50	190	2x11x6x2x3x3x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                                   ||X||||||||||X|||||X|X||X||X|||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGgGTgCTgGGT-
R:         19   T02130201030310312232320111101112011122230123220012    49        
--
>262_1871_3267_F3	ENSMUST00000113126	-	2597	2620	21	44	50	180	11x8x2x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                     |||||||||||X|||||||X|X||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGtGC------
R:         21   T02130201030310312332320111101112011121220213321132    44        
--
>262_2137_3090_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	5x8x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   |||||X|||||||X|||||||
T:               ------------------AGAGGtGTGGTGTgGTGTCAG-----------
R:         19   T02330201030310112322220311101112011121223332000211    39        
--
>262_2590_2571_F3	ENSMUST00000113126	-	2601	2627	14	40	50	190	2x2x15x5x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                              ||X|X||||||||||||||X||||X||
T:               -------------TAgAcAGAGGTGTGGTGTGgTGTCaGG----------
R:         14   T32130201130310312312220111101111311122203022332312    40        
--
>263_673_2336_F3	ENSMUST00000113126	-	2593	2623	17	47	50	176	3C2x14x1x1x5x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                 ||| ||X|||||||||||||XXX||||X|||
T:               ----------------CAGCGGtGTGGTGTGGTGTCaggGTGCtGGG---
R:         17   T10301010320031012123303111011110111231201133100201    47        
--
>263_1779_2211_F3	ENSMUST00000113126	-	2604	2629	11	36	50	180	x6x6x11x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           X|||||X|||||X||||||||||X||
T:               ----------tGTAGAcAGAGGtGTGGTGTGGTgTC--------------
R:         11   T23302010303113223122203111011110121201310321323321    36        
--
>263_2562_4423_F3	ENSMUST00000113126	+	730	746	9	25	50	150	3x14	
G:        730    CAATGTCAGTGCCTACTGCCTGCATATTGCTGAGGATGATGGGGAGGTCG    746       
                         |||X|||||||||||||
T:               --------GTGcCTACTGCCTGCAT-------------------------
R:          9   T20201030311202312130213131311110113303233322321011    25        
--
>263_2589_4065_F3	ENSMUST00000113126	-	2071	2098	9	36	50	166	3x5x2x12x2G3	
G:       2098    TCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTTG    2071      
                         |||X||||X|X|||||||||||X| |||
T:               --------TGAgAGCTcCaACCACAGCTTTtGGAAT--------------
R:          9   T01030311112322320000101112320011020333300202323202    36        
--
>263_3866_2800_F3	ENSMUST00000113126	-	2603	2627	13	37	50	170	2x2x3x3x15	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                             ||X|X||X||X||||||||||||||
T:               ------------TAgAcAGaGGtGTGGTGTGGTGTCA-------------
R:         13   T10301010303133323123203111011110111213323320203022    37        
--
>264_1834_1817_F3	ENSMUST00000113126	+	2602	2623	20	41	50	166	5x11G5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                    |||||X|||||||||| |||||
T:               -------------------CTGACaCCACACCACAGCTCTG---------
R:         20   T11202012303012313333212131011110111232221332133133    41        
--
>264_1865_3282_F3	ENSMUST00000113126	-	2602	2627	14	39	50	166	2x2T5x8x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X| |||||X|||||||X|||||||
T:               -------------TAgATAGAGGtGTGGTGTgGTGTCAG-----------
R:         14   T02330201030310312332220011101112011121232232032112    39        
--
>264_1875_3907_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T23102013301001000033203111011110111212203333202202    38        
--
>264_3235_3572_F3	ENSMUST00000113126	+	2601	2622	19	40	50	180	1x2x19	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                   |X|X||||||||||||||||||
T:               ------------------CcTgACACCACACCACACCTCT----------
R:         19   T23102010301302023123202111011110111102222332231032    40        
--
>264_3723_3769_F3	ENSMUST00000113126	-	2600	2618	22	40	50	170	15x4	
G:       2618    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                      |||||||||||||||X|||
T:               ---------------------GTGTGGTGTGGTGTCaGGG----------
R:         22   T23302010303101313123231111011110111202003322222313    40        
--
>264_4166_2616_F3	ENSMUST00000113126	-	2596	2620	21	45	50	196	11x9A4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||||| ||||
T:               --------------------AGGTGTGGTGTgGTGTCAGGATGCT-----
R:         21   T02330201030310112332320111101112011121202313232333    45        
--
>265_710_1046_F3	ENSMUST00000113126	-	2597	2613	23	39	50	170	17	
G:       2613    TCTAAACAATCAGCCCAGGAGTGTGTGGTGTCAGGGTGCAAAAAATCCCT    2597      
                                       |||||||||||||||||
T:               ----------------------GTGTGGTGTCAGGGTGC-----------
R:         23   T23200201030313112312313111101112120011301130233211    39        
--
>265_987_3939_F3	ENSMUST00000113126	-	2600	2622	19	41	50	190	2x11x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGG---------
R:         19   T02130201030310112032320111101112011121200021031100    41        
--
>265_1101_2980_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T33130201030310112332320111101112011121210031302011    39        
--
>265_1327_1003_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02130201030310112312320111101112011121210033322101    39        
--
>265_1635_4817_F3	ENSMUST00000113126	-	2596	2620	21	45	50	170	11x6x2x3x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||X|X||X||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGTgCT-----
R:         21   T02130201030310312332320111101112011120230123201230    45        
--
>265_1643_3322_F3	ENSMUST00000113126	-	2597	2622	19	44	50	200	2x3x8x13	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                   ||X||X|||||||X||||||||||||
T:               ------------------AGaGGtGTGGTGTgGTGTCAGGGTGC------
R:         19   T02330201030320312332020011101112011121200113303222    44        
--
>265_1770_1601_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x14x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGG-----------
R:         17   T23302010303001002123203111011110111232032232311232    39        
--
>265_2664_3421_F3	ENSMUST00000113126	-	2595	2625	15	45	50	190	x5x3x14x4x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               X||||X||X|||||||||||||X|||X|X||
T:               --------------gACAGaGGtGTGGTGTGGTGTCaGGGtGcTG-----
R:         15   T23302010301001021123203111011110111202003102111110    45        
--
>265_2701_2130_F3	ENSMUST00000113126	-	2598	2623	18	43	50	180	x3x11x8x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                  X||X||||||||||X|||||||X|||
T:               -----------------cAGaGGTGTGGTGTgGTGTCAGgGTG-------
R:         18   T02330201030310112312320111101112011121210110202123    43        
--
>265_2730_3979_F3	ENSMUST00000113126	-	2602	2626	15	39	50	170	1x2x3x11x8	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                               |X|X||X||||||||||X|||||||
T:               --------------AgAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         15   T02130201030310112312120111101112011121230001103220    39        
--
>265_2733_3731_F3	ENSMUST00000113126	+	2597	2621	15	39	50	170	5x2x2x12x4	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                               |||||X|X|X|||||||||||X|||
T:               --------------GCACCcTgAcACCACACCACAcCTC-----------
R:         15   T23102010300031331103222211011110111202200032301012    39        
--
>265_2835_2888_F3	ENSMUST00000113126	-	2598	2623	17	42	50	180	3x3x11x6x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                 |||X||X||||||||||X|||||X||
T:               ----------------CAGaGGtGTGGTGTGGTgTCAGGgTG--------
R:         17   T23102010301001130123202111011110131212031100101222    42        
--
>265_3391_2466_F3	ENSMUST00000113126	-	2596	2619	21	44	50	160	2x12x2x2x6	
G:       2619    AAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                     ||X|||||||||||X|X|X|||||
T:               --------------------GGtGTGGTGTGGTGtCaGgGTGCT------
R:         21   T10302010303211323123003111011110113202301132331210    44        
--
>265_3397_3200_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T01002013300313333223201111011110111233032120202321    36        
--
>266_121_4114_F3	ENSMUST00000113126	-	2601	2625	14	38	50	170	2x3x3x10x7	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                              ||X||X||X|||||||||X||||||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAGG------------
R:         14   T23120103031311231232031110111102112120233123122003    38        
--
>266_238_3095_F3	ENSMUST00000113126	-	2598	2620	25	47	50	176	11x8C3	
G:       2620    GAAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAA    2598      
                                         |||||||||||X||||||| |||
T:               ------------------------AGGTGTGGTGTgGTGTCAGCGTG---
R:         25   T11123233020100031013231132011110111201112123311133    47        
--
>266_602_3499_F3	ENSMUST00000113126	-	85	118	8	41	50	186	2x2x4x4C2x13x2x4	
G:        118    CTCTGTAGTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    85        
                        ||X|X|||X||| ||X||||||||||||X|X|||
T:               -------GTgTcATCaCTGCTCaCGTGTGACTGTCgAaTAT---------
R:          8   T22010303131313231213222131111212112121333333011013    41        
--
>266_1280_1973_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x9x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||||X||||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAATC------------
R:          9   T00133031111232232011110111232100113032330321231122    38        
--
>266_1730_152_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232011110111232000110003330202112112    34        
--
>266_1747_1854_F3	ENSMUST00000113126	-	2597	2626	15	44	50	186	1x2T2x11x10x3	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                               |X| ||X||||||||||X|||||||||X||
T:               --------------AgATAGaGGTGTGGTGTgGTGTCAGGGtGC------
R:         15   T31130201030310112332020111101112011121200013103013    44        
--
>266_1811_1979_F3	ENSMUST00000113126	-	2597	2623	18	44	50	190	x3x11x10x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                  X||X||||||||||X|||||||||X||
T:               -----------------cAGaGGTGTGGTGTgGTGTCAGGGtGC------
R:         18   T02130201030310312312320111101112011121200013321132    44        
--
>266_1964_4789_F3	ENSMUST00000113126	-	2590	2622	18	50	50	182	2x15G3x2x1x2G6	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                                  ||X|||||||||||||| |||X|XX| ||||||
T:               -----------------AGaGGTGTGGTGTGGTGGCAGgGtgCGGGGTAC
R:         18   T01002013303211301223201111011110110312300233000131    50        
--
>266_2415_1460_F3	ENSMUST00000113126	+	2309	2327	26	44	50	170	11x8	
G:       2309    CATGTCAGCGCCTGTGATCTGAGAGACAGGTGCTGGTAATATAGTGTGAC    2327      
                                          |||||||||||X|||||||
T:               -------------------------ACAGGTGCTGGtAATATAG------
R:         26   T20221032013112312300310101112011321023033332222131    44        
--
>266_2883_3192_F3	ENSMUST00000113126	+	2602	2628	20	46	50	176	2x13x6x1C4	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                    ||X||||||||||||X|||||X ||||
T:               -------------------CTgACACCACACCACaCCTCTgCCTAC----
R:         20   T23102010300001012123202111011110110102222302312121    46        
--
>266_3026_1007_F3	ENSMUST00000113126	+	2605	2624	23	42	50	180	12x8	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                       ||||||||||||X|||||||
T:               ----------------------ACACCACACCACaCCTCTGT--------
R:         23   T23302010303001323123203111011110113102221130032021    42        
--
>266_3267_4020_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T23302010301001020323203111011110111202221332132222    41        
--
>266_3375_4124_F3	ENSMUST00000113126	-	2601	2623	18	40	50	190	14x4x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  ||||||||||||||X|||X||||
T:               -----------------CAGAGGTGTGGTGTgGTGtCAGG----------
R:         18   T00130201330310112312220111101112011321202020033112    40        
--
>266_3385_2300_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T32303010303031321123203111011110111002331202230310    35        
--
>266_3463_4633_F3	ENSMUST00000113126	-	2602	2627	13	38	50	160	2x2x3x3x12x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                             ||X|X||X||X|||||||||||X|||
T:               ------------TAgAcAGaGGtGTGGTGTGGTGtCAG------------
R:         13   T23302010303233323123203111011110112212230322121022    38        
--
>266_3485_4151_F3	ENSMUST00000113126	-	2602	2620	23	41	50	170	11x8	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                       |||||||||||X|||||||
T:               ----------------------AGGTGTGGTGTgGTGTCAG---------
R:         23   T12323302010303131023123201111011120111212223002300    41        
--
>266_4069_4577_F3	ENSMUST00000113126	+	1215	1247	13	45	50	170	x13x5x1x2x3x3x1x5	
G:       1215    TTCAAAGTCAGCATGATCCACAGACTGCGATTCACGACGGATGTGCAGTT    1247      
                             X||||||||||||X||||XX|X||X||XX||||
T:               ------------aTGATCCACAGACtGCGAttCaCGaCGgaTGTG-----
R:         13   T13320302131123123201112211133213231301330311110232    45        
--
>266_4191_1961_F3	ENSMUST00000113126	+	1607	1630	24	47	50	180	1x8x2x13	
G:       1607    TTCCAGAAGGAGAAGAAATCAGGGCAGCAGTGACACTGGCCTCTAGTCTG    1630      
                                        |X|||||||X|X||||||||||||
T:               -----------------------GcAGCAGTGaCaCTGGCCTCTAGT---
R:         24   T23002232303001311231103111231211112121030222321022    47        
--
>267_569_237_F3	ENSMUST00000113126	-	84	125	1	42	50	166	1x5x2C2x2x2x3x2x2x13x2x1x4	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCGAATATGTGAAATTG    84        
                 |X||||X| ||X|X|X||X|X|X||||||||||||X|XX|||
T:               CaTTCCtGCGTcAtCaCTgGtCaCGTGTGACTGTCgAatATG--------
R:          1   T23302011331311231230223131111212112123233113231031    42        
--
>267_983_4847_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	1x2x3x3x16	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X|X||X||X|||||||||||||||
T:               -------------AgAcAGaGGtGTGGTGTGGTGTCAG------------
R:         14   T23302032301321323123203111011110111212320010133102    38        
--
>267_1158_2487_F3	ENSMUST00000113126	-	2600	2623	18	41	50	200	3x18x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X|||||||||||||||||X||
T:               -----------------CAGaGGTGTGGTGTGGTGTCAgGG---------
R:         18   T02330201030310112012320111101111011121100011103231    41        
--
>267_1726_481_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	3x3x3x11x5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |||X||X||X||||||||||X||||
T:               -------------AGAcAGaGGtGTGGTGTGGTgTCAG------------
R:         14   T10032010303031222123203111011110121212100233220331    38        
--
>267_2856_2843_F3	ENSMUST00000113126	-	2069	2099	9	39	50	196	1x8x1x2x15T3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X|||||||||||||| |||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTATTCT-----------
R:          9   T00133031111222232011210111232000113302200022300133    39        
--
>267_2857_1267_F3	ENSMUST00000113126	-	2601	2625	15	39	50	176	5x3x13A3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||| |||
T:               --------------GACAGaGGtGTGGTGTGGTGTAAGG-----------
R:         15   T23102010301300321123203111011110111302031303322223    39        
--
>267_3026_3269_F3	ENSMUST00000113126	+	2591	2624	9	42	50	172	1x5x1x2T1x2T13x7	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                         |X||||XX| |X| |||||||||||||X||||||
T:               --------TaCCCAgcATCcTTACACCACACCACAcCTCTGT--------
R:          9   T23102010301001001323203111011110111202221102020103    42        
--
>267_3153_871_F3	ENSMUST00000113126	-	86	125	1	40	50	186	1x5x2C2x4x3x2x2x12x3x3	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    86        
                 |X||||X| ||X|||X||X|X|X|||||||||||X||X||
T:               CaTTCCtGCGTcATCaCTgGtCaCGTGTGACTGTcGAaTA----------
R:          1   T23302011331313231230223131111212111321330101103233    40        
--
>267_3299_3131_F3	ENSMUST00000113126	+	2081	2112	16	47	50	178	2x2C5T3G9x8	
G:       2081    GGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAAGCAATGTTTAGGGC    2112      
                                ||X| ||||| ||| |||||||||X|||||||
T:               ---------------CTgTCGTTGGTGCTGTCAGAAGCAaTGTTTAG---
R:         16   T12231031030112312312310101132112122023113110032311    47        
--
>268_450_553_F3	ENSMUST00000113126	-	2601	2622	18	39	50	160	2x12x5x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  ||X|||||||||||X||||X||
T:               -----------------AGaGGTGTGGTGTGgTGTCaGG-----------
R:         18   T01001313323011020223201111011113111232033332331220    39        
--
>268_776_3570_F3	ENSMUST00000113126	+	2592	2622	10	40	50	182	5x1x2T1x2T18	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                          |||||XX| |X| ||||||||||||||||||
T:               ---------ACCCAgcATCcTTACACCACACCACACCTCT----------
R:         10   T23102013301001021323203111011110111102223323231123    40        
--
>268_994_2669_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232011110111232000113020020002012221    36        
--
>268_1091_3513_F3	ENSMUST00000113126	-	2596	2620	21	45	50	176	11x5T4x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||| ||||X|||
T:               --------------------AGGTGTGGTGTgGTGTTAGGGtGCT-----
R:         21   T30230201030310112332320111101112011103200213220220    45        
--
>268_1674_631_F3	ENSMUST00000113126	-	2211	2234	6	29	50	160	3x1x10x6x4	
G:       2234    TTTCCACCCACGCATGCACTTACGCTGGGTCATAAGTTTGGCTTCAGTAC    2211      
                      |||XX|||||||||X|||||X|||
T:               -----ACCcaCGCATGCACtTACGCtGGG---------------------
R:          6   T13302010301331313110031330100100202232333332011331    29        
--
>268_2658_2601_F3	ENSMUST00000113126	-	2600	2627	14	41	50	180	2x2x3x3x8x10	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X|X||X||X|||||||X|||||||||
T:               -------------TAgAcAGaGGtGTGGTGTgGTGTCAGGG---------
R:         14   T02330201030310312312320311101112011121200323322112    41        
--
>268_2713_4082_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T01002013303011023223201111011110111203210330202221    36        
--
>268_3599_1611_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x13x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X||||||||||||X||
T:               --------------GACAGaGGtGTGGTGTGGTGTcAG------------
R:         15   T23302012103021321123203111011110111012233223022322    38        
--
>268_3790_3219_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	14x3x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  ||||||||||||||X||X||||
T:               -----------------CAGAGGTGTGGTGTgGTgTCAG-----------
R:         18   T02130201030320312312220111101112012121220023202102    39        
--
>268_4107_2778_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T13102013303303003323203111011110111102223312222300    40        
--
>269_744_3507_F3	ENSMUST00000113126	-	2597	2625	16	44	50	170	3x2x11x2x6x2x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                |||X|X||||||||||X|X|||||X|X||
T:               ---------------GACaGaGGTGTGGTGTgGtGTCAGgGtGC------
R:         16   T01030201030310012132320111101112001121220313322122    44        
--
>269_1122_3652_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	3x8x10	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||X|||||||X|||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGG-----------
R:         19   T31020103031310231232031110111201112120032031011033    39        
--
>269_1232_2807_F3	ENSMUST00000113126	-	2602	2627	14	39	50	200	2x5x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X||||X||||||||||X|||||||
T:               -------------TAgACAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T03230201030310312112320111101112011121222323313323    39        
--
>269_1545_4633_F3	ENSMUST00000113126	-	2596	2625	14	43	50	180	2x3x3x8x8x1x5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                              ||X||X||X|||||||X|||||||XX||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGggTGCT-------
R:         14   T13020103031313231232031110111201112122311322112302    43        
--
>269_1672_749_F3	ENSMUST00000113126	+	2593	2621	11	39	50	196	4x4x1x2T17	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                           ||||X|||XX| |||||||||||||||||
T:               ----------CCCAgCACccTTACACCACACCACACCTC-----------
R:         11   T23302010300001031123203111011110111102232203011012    39        
--
>269_2719_1775_F3	ENSMUST00000113126	-	86	110	16	40	50	170	3x2x2x13x5	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    86        
                                |||X|X|X||||||||||||X||||
T:               ---------------ACTgGtCaCGTGTGACTGTCgAATA----------
R:         16   T23320103031310231230223131111212112020330322121023    40        
--
>269_2955_3646_F3	ENSMUST00000113126	+	2604	2627	22	45	50	180	1x16x1x6	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      |X|||||||||||||||XX|||||
T:               ---------------------GaCACCACACCACACCTctGTCTA-----
R:         22   T23102010301001300123203111011110111102301122302132    45        
--
>269_3240_4539_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T33132010302300300323203111011110111102223231332231    40        
--
>269_3399_3033_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	13x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||||X||||
T:               ----------------------ACACCACACCACAcCTCT----------
R:         23   T23302010303133323123203111011110111302223332332332    40        
--
>269_3535_1620_F3	ENSMUST00000113126	+	2604	2626	22	44	50	170	1x13x5x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                      |X||||||||||||X||||X|||
T:               ---------------------GaCACCACACCACAcCTCTgTCT------
R:         22   T23301010301303302323203111011110111202223122033331    44        
--
>269_3853_4207_F3	ENSMUST00000113126	-	2602	2618	25	41	50	170	17	
G:       2618    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                         |||||||||||||||||
T:               ------------------------GTGTGGTGTGGTGTCAG---------
R:         25   T10230122030020102033223231111011110111212221200322    41        
--
>269_3887_4973_F3	ENSMUST00000113126	+	2596	2625	14	43	50	180	4x2x2x6x2x11x3	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                              ||||X|X|X|||||X|X||||||||||X||
T:               -------------AGCAcCcTgACACCaCaCCACACCTCTgTC-------
R:         14   T23332011331313231203222111021210111102220120000112    43        
--
>269_4096_1559_F3	ENSMUST00000113126	-	2597	2617	23	43	50	176	13G7	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                       ||||||||||||| |||||||
T:               ----------------------TGTGGTGTGGTGTGAGGGTGC-------
R:         23   T23102010301000300223203111011110111122001131310032    43        
--
>270_1574_3167_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	14x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    ||||||||||||||X||||
T:               -------------------AGGTGTGGTGTGGTgTCAG------------
R:         20   T01002013303011023223201111011110131212231222221031    38        
--
>270_1854_2280_F3	ENSMUST00000113126	-	2602	2629	11	38	50	166	2x2x2x2T3x16	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||X|X|X| |||X|||||||||||||||
T:               ----------TGtAgAcATAGGtGTGGTGTGGTGTCAG------------
R:         11   T23303010303133323133203111011110111212222333232121    38        
--
>270_2022_3156_F3	ENSMUST00000113126	-	2597	2620	20	43	50	166	3x14x3A3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X|||||||||||||X|| |||
T:               -------------------AGGtGTGGTGTGGTGTCaGGATGC-------
R:         20   T23302010303001003123203111011110111222023133323110    43        
--
>270_2125_3195_F3	ENSMUST00000113126	-	709	753	2	46	50	216	1x2x4x6x10x1x2x4x6x1x1G6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCGAGGT    709       
                  |X|X|||X|||||X|||||||||XX|X|||X|||||XX ||||||
T:               -CaGcAATaTGCAGgCAGTAGGCActGaCATtGTCATtgGGCTTCG----
R:          2   T13020103031312231213203131111131112132200320233021    46        
--
>270_2246_1617_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T33322010300301302123203111011110111102233213011320    39        
--
>270_3502_3239_F3	ENSMUST00000113126	-	2603	2622	18	37	50	160	2x3x15	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                  ||X||X||||||||||||||
T:               -----------------AGaGGtGTGGTGTGGTGTCA-------------
R:         18   T23322010320001301223203111011110111213322322111330    37        
--
>271_327_715_F3	ENSMUST00000113126	-	2595	2623	17	45	50	190	3x3x16x2x2x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                 |||X||X|||||||||||||||X|X|X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAGgGtGcTG-----
R:         17   T21102010301231023123203111011110111212202112112331    45        
--
>271_475_2950_F3	ENSMUST00000113126	+	2592	2627	10	45	50	178	5x1G1T1x2T13x3x7	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                          |||||X | |X| |||||||||||||X||X||||||
T:               ---------ACCCAgGATCcTTACACCACACCACAcCTcTGTCTA-----
R:         10   T33112013301001302323203111011110111302021122320111    45        
--
>271_886_2616_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T23102013303002302123201111011110111202332313220312    36        
--
>271_931_4562_F3	ENSMUST00000113126	+	2589	2622	7	40	50	180	2x1x5x4x1x2x13x1x5	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                       ||XX||||X|||XX|X||||||||||||XX||||
T:               ------GGtaCCCAgCACccTgACACCACACCACacCTCT----------
R:          7   T22312010301001331123202111011110113202222202321202    40        
--
>271_1566_1679_F3	ENSMUST00000113126	-	2594	2624	16	46	50	190	1x3x3x14x3x2x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                |X||X||X|||||||||||||X||X|X||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCaGGgTgCTGG----
R:         16   T13322013301301332123203111011110111202021232103111    46        
--
>271_2468_2998_F3	ENSMUST00000113126	-	2603	2624	16	37	50	180	4x3x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                ||||X||X||||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCA-------------
R:         16   T23102010301001301123203111011110111213333323210012    37        
--
>271_2480_2857_F3	ENSMUST00000113126	+	2594	2622	12	40	50	170	3x4x1x2x1x15x3	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||X|||XX|XX||||||||||||||X||
T:               -----------CCAgCACccTgaCACCACACCACACCtCT----------
R:         12   T23301010300301031123233111011110111103222302103003    40        
--
>271_2512_1864_F3	ENSMUST00000113126	+	2605	2631	23	49	50	196	13x4C5x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                                       |||||||||||||X||| |||||X|||
T:               ----------------------ACACCACACCACAcCTCCGTCTAcACC-
R:         23   T23102010300201023123203111011110111202203122321102    49        
--
>271_3114_156_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T13322010301003030123203111011110111210223130322020    37        
--
>271_3123_4287_F3	ENSMUST00000113126	-	2596	2623	17	44	50	180	3x3x2x7x10x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 |||X||X|X||||||X|||||||||X||
T:               ----------------CAGaGGtGtGGTGTGgTGTCAGGGTgCT------
R:         17   T33212010323331023121203101011112111212001332223120    44        
--
>271_3901_1142_F3	ENSMUST00000113126	+	1273	1300	20	47	50	186	3x13x2x5T4	
G:       1273    GGTATCTCTGGAGACAAAGTAGAGATAGACCCTGTTACGAATCAGAAAGC    1300      
                                    |||X||||||||||||X|X|||| ||||
T:               -------------------TAGaGATAGACCCTGTtAcGAATTAGAA---
R:         20   T23102012303001013112320223322100211132320303220122    47        
--
>272_177_1415_F3	ENSMUST00000113126	-	2604	2623	17	36	50	180	6x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 ||||||X|||||||||||||
T:               ----------------CAGAGGtGTGGTGTGGTGTC--------------
R:         17   T10122010303101113122203111011110111232322231233223    36        
--
>272_287_3977_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T21230201030313112312320111101112011121330132123010    38        
--
>272_339_3887_F3	ENSMUST00000113126	-	2596	2617	22	43	50	186	18G3	
G:       2617    AATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                      |||||||||||||||||| |||
T:               ---------------------TGTGGTGTGGTGTCAGGGGGCT-------
R:         22   T10320103031311231230021110111101112120000322210012    43        
--
>272_1322_864_F3	ENSMUST00000113126	+	755	776	10	31	50	160	1x3x5x13	
G:        755    TATTGCTGAGGATGATGGGGAGGTCGACACGGATTTTCCGCCACTGGATT    776       
                          |X||X||||X||||||||||||
T:               ---------GgATgATGGgGAGGTCGACACG-------------------
R:         10   T00133031311232231010220123211133013102232200312000    31        
--
>272_1718_4420_F3	ENSMUST00000113126	-	2597	2617	20	40	50	170	12x4x5	
G:       2617    TTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                                    ||||||||||||X|||X||||
T:               -------------------TGTGGTGTGGTGtCAGgGTGC----------
R:         20   T22010303131123223203111011110113212101130222300232    40        
--
>272_1894_3846_F3	ENSMUST00000113126	-	2591	2623	15	47	50	176	3C2x8x8x1x3x2x5	
G:       2623    ATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATCC    2591      
                               ||| ||X|||||||X|||||||XX||X|X||||
T:               --------------CAGCGGtGTGGTGTgGTGTCAGggTGcTgGGTA---
R:         15   T13201030313112312330311101112011121232110230013312    47        
--
>272_1970_1967_F3	ENSMUST00000113126	+	2587	2628	5	46	50	178	2x2x1x5x1x3G2T13x3A2x5	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                     ||X|XX||||XX|| || |||||||||||||X|| ||X||||
T:               ----AAgGtaCCCAgcACGCTTACACCACACCACAcCTATGtCTAC----
R:          5   T23332010301001001133203111011110111202331322312232    46        
--
>272_2169_2310_F3	ENSMUST00000113126	+	2595	2627	13	45	50	182	10x8x4G1x3x1T4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                             ||||||||||X|||||||X||| |X||X ||||
T:               ------------CAGCACCCTGaCACCACAcCACGCcTCtTTCTA-----
R:         13   T23302010331311231100213111011100113332200022322333    45        
--
>272_2466_3657_F3	ENSMUST00000113126	-	707	747	8	48	50	162	x6x1x4x7x2x8T1C1x1x5x3	
G:        747    CCTTCTATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCGGCGT    707       
                        X|||||XX|||X||||||X|X||||||| | |XX||||X||
T:               -------tATGCAggCAGtAGGCACtGaCATTGTCTTCGagCTTCgGC--
R:          8   T23112010331313231233203111111130112202331320200332    48        
--
>272_3199_1705_F3	ENSMUST00000113126	+	2605	2627	23	45	50	190	18x1x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       ||||||||||||||||||XX|||
T:               ----------------------ACACCACACCACACCTCTgtCTA-----
R:         23   T23132010321000000323203111011110111102220322322222    45        
--
>272_3584_2065_F3	ENSMUST00000113126	-	2603	2627	14	38	50	170	2x2x3x11x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X|X||X||||||||||X||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCA------------
R:         14   T13030201030313312312320111101112011121320312000222    38        
--
>272_4018_2760_F3	ENSMUST00000113126	-	2596	2625	20	49	50	186	2x14x6G2x2x3	
G:       2625    GAAAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTA    2596      
                                    ||X|||||||||||||X||||| ||X|X||
T:               -------------------GAcAGAGGTGTGGTGTgGTGTCGGGgTgCT-
R:         20   T11123233020103031313201222011110111201112300213322    49        
--
>273_728_1925_F3	ENSMUST00000113126	-	2600	2627	14	41	50	166	2x2T2x11x6x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X| ||X||||||||||X|||||X|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCaGGG---------
R:         14   T3133020103031031233202011110111201112020003.203123    41        
--
>273_1250_1501_F3	ENSMUST00000113126	-	2610	2629	20	39	50	160	2x10x8	
G:       2629    GAAAGAAAGAAATTCTAAATGTAGACAGAGGTGTGGTGTGTCACTGTTTG    2610      
                                    ||X|||||||||X|||||||
T:               -------------------TGtAGACAGAGGtGTGGTGT-----------
R:         20   T1201301121330301030313322112220311101112023.223303    39        
--
>273_1500_2353_F3	ENSMUST00000113126	-	2590	2627	13	50	50	182	2x1x4x17x2C1C4x2x3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                             ||XX|||X||||||||||||||||X| | ||||X|X||
T:               ------------TAgaCAGaGGTGTGGTGTGGTGTCaGCGCGCTGgGtAC
R:         13   T2310301330020301112320111101111011123233333.320031    50        
--
>273_1768_2223_F3	ENSMUST00000113126	-	2603	2625	15	37	50	190	5x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               |||||X||X||||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T2332001030300332112320311101111011121022032.322112    37        
--
>273_2581_4267_F3	ENSMUST00000113126	-	2593	2624	16	47	50	190	1x3x3x14x1x1x9	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                |X||X||X|||||||||||||XXX||||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCaggGTGCTGGG---
R:         16   T2310101030130130212320311101111011120010113.300230    47        
--
>273_2789_2952_F3	ENSMUST00000113126	+	785	813	21	49	50	166	1x10x6x4G4x3	
G:        785    GAGGTCGACACGGATTTTCCGCCACTGGATTCCAATGAGCCCATTCATAA    813       
                                     |X|||||||||X|||||X||| ||||X||
T:               --------------------GcCACTGGATTcCAATGaGCCGATTCaTA-
R:         21   T0013303111123223203111011210230001031023032.222332    49        
--
>273_3231_4402_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223203111011123200012200211021.002031    33        
--
>273_3276_4937_F3	ENSMUST00000113126	+	1629	1651	21	43	50	176	4T3x15	
G:       1629    AGCAGTGACACTGGCCTCTAGTCTGGTGCCACAGCCCAGGTGGCCTGCAA    1651      
                                     |||| |||X||||||||||||||
T:               --------------------GTCTTGTGcCACAGCCCAGGTGG-------
R:         21   T0222103001111231233301220111201112300120110.222302    43        
--
>273_3364_4434_F3	ENSMUST00000113126	+	2036	2073	5	42	50	166	3x2x13G2x1x4x1x1x2x3x5	
G:       2036    TTATCTTCCTTAAAATCTGTTCCCATATTGAACAGGCAGATTACAAAAGC    2073      
                     |||X|X|||||||||||| ||XX|||XXX|X||X||||
T:               ----CTTcCtTAAAATCTGTTCGCAtaTTGaacAgGCaGATT--------
R:          5   T1003020103030003221102331013011201303222301.310232    42        
--
>274_457_3963_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T10301010323230223123202111011110111211023233201102    37        
--
>274_973_1131_F3	ENSMUST00000113126	-	2601	2620	19	38	50	160	1x6x13	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |X|||||X||||||||||||
T:               ------------------AgGTGTGgTGTGGTGTCAGG------------
R:         19   T32320103031310231233011113111101112120230333221023    38        
--
>274_1325_1031_F3	ENSMUST00000113126	-	2596	2624	16	44	50	170	1x3x3x12x2x5x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                |X||X||X|||||||||||X|X||||X||
T:               ---------------AcAGaGGtGTGGTGTGGTGtCaGGGTgCT------
R:         16   T23302010301301132123203111011110113232001232230012    44        
--
>274_1847_4380_F3	ENSMUST00000113126	-	1746	1773	15	42	50	180	2x1x6x1x12x6	
G:       1773    ATTCACGACGGATGTGCCAAGTTTCAGTCCAATCGCACCCCTAGAGATAG    1746      
                               ||XX|||||XX|||||||||||X|||||
T:               --------------TGccAAGTTtcAGTCCAATCGCaCCCCT--------
R:         15   T00231031011212312310210111212010323331000202301232    42        
--
>274_2427_3045_F3	ENSMUST00000113126	-	722	754	1	33	50	190	x4x4x6x11x2x2x4	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    722       
                 X|||X|||X|||||X||||||||||X|X|X|||
T:               tCAGcAATaTGCAGgCAGTAGGCACtGaCaTTG-----------------
R:          1   T12120103031312231213203111111330122022201332212120    33        
--
>274_2554_4004_F3	ENSMUST00000113126	+	2590	2619	8	37	50	178	2x4C4G2T15	
G:       2590    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                        ||X||| |||| || |||||||||||||||
T:               -------GTaCCCCGCACGCTTACACCACACCACACC-------------
R:          8   T13232022111000331133203111011110111100323320032222    37        
--
>274_3084_3065_F3	ENSMUST00000113126	-	2073	2095	13	35	50	170	5x1x2x15	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                             |||||XX|X||||||||||||||
T:               ------------GAGCTccAaCCACAGCTTTTGTA---------------
R:         13   T00133031111212232031110111232000113211330323311311    35        
--
>275_338_2197_F3	ENSMUST00000113126	-	2595	2620	21	46	50	186	11x8A1x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X||||||| |X||||
T:               --------------------AGGTGTGGTGTgGTGTCAGAGtGCTG----
R:         21   T31030201030310312322320111101112011121222213213211    46        
--
>275_3258_1768_F3	ENSMUST00000113126	+	2608	2626	28	46	50	170	2x17	
G:       2608    AAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACAC    2626      
                                            ||X||||||||||||||||
T:               ---------------------------CCaCACCACACCTCTGTCT----
R:         28   T23333101230201030013113312330311101111022211222330    46        
--
>275_3961_4019_F3	ENSMUST00000113126	-	730	751	4	25	50	160	1x4x6x11	
G:        751    CCTGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                    |X|||X|||||X||||||||||
T:               ---GcAATaTGCAGgCAGTAGGCAC-------------------------
R:          4   T12200103031312231213203113111232133022311323300112    25        
--
>275_4274_2202_F3	ENSMUST00000113126	-	2596	2623	17	44	50	186	6x11A1x6x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 ||||||X|||||||||| |X|||||X||
T:               ----------------CAGAGGtGTGGTGTGGTATcAGGGTgCT------
R:         17   T23100201030333010122203111011110133312001232303033    44        
--
>276_199_3703_F3	ENSMUST00000113126	-	1921	1950	13	42	50	180	3x3x1x3x8x2x10	
G:       1950    TGGAGAGCACGCAGAGAAATGTACACTTTTGTTCTTTGTTTGTGGTTCGC    1921      
                             |||X||XX||X|||||||X|X|||||||||
T:               ------------AGAgAAatGTaCACTTTTgTtCTTTGTTTG--------
R:         13   T00133031111232232011110111200001322001100113331210    42        
--
>276_540_3514_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111232232011110111232000313001320323230120    36        
--
>276_1458_1033_F3	ENSMUST00000113126	-	2598	2620	19	41	50	170	3x8x8x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                                   |||X|||||||X|||||||X|||
T:               ------------------AGGtGTGGTGTgGTGTCAGgGTG---------
R:         19   T13200103031310231232031110111201112122011103310000    41        
--
>276_3029_3243_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	3x3x14x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGG----------
R:         17   T21332010302300000123203111011110111202000203121101    40        
--
>276_3436_3913_F3	ENSMUST00000113126	-	2595	2623	17	45	50	182	3C2x16x3A3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                 ||| ||X|||||||||||||||X|| |||
T:               ----------------CAGCGGtGTGGTGTGGTGTCAGgGTACTG-----
R:         17   T23312010321331333123300111011110111212301312130322    45        
--
>277_291_2378_F3	ENSMUST00000113126	+	2589	2621	7	39	50	176	2x3x3x4x1G2x7x10	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                       ||X||X||X|||X ||X||||||X|||||||||
T:               ------GGtACcCAgCACcGTGaCACCACaCCACACCTC-----------
R:          7   T23302010331301031113113111011310111102213332122012    39        
--
>277_421_3468_F3	ENSMUST00000113126	-	2600	2625	15	40	50	200	5x3x15x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||X||||||||||||||X||
T:               --------------GACAGaGGtGTGGTGTGGTGTCAgGG----------
R:         15   T23102010321302321123203111011110111211002002312211    40        
--
>277_851_437_F3	ENSMUST00000113126	-	718	750	5	37	50	190	x4x6x10x1x2x2x8	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                     X|||X|||||X|||||||||XX|X|X|||||||
T:               ----cAATaTGCAGgCAGTAGGCActGaCaTTGTCAT-------------
R:          5   T11220103031312231213203133111230112132231302010011    37        
--
>277_1508_1863_F3	ENSMUST00000113126	-	2598	2620	19	41	50	170	3x8x8x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                                   |||X|||||||X|||||||X|||
T:               ------------------AGGtGTGGTGTgGTGTCAGgGTG---------
R:         19   T22220103031310231232021110111201112122011131322102    41        
--
>277_2467_3844_F3	ENSMUST00000113126	-	2599	2620	19	40	50	160	3x8x2x9	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X|||||||X|X||||||||
T:               ------------------AGGtGTGGTGTgGtGTCAGGGT----------
R:         19   T23320103031310231232031110111202112120013331300010    40        
--
>277_2762_418_F3	ENSMUST00000113126	-	79	118	8	47	50	200	2x2x4x3x1x14x3x1x1x3x6	
G:        118    CTCTGTAGTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    79        
                        ||X|X|||X||XX|||||||||||||X||XXX||X|||||
T:               -------GTgTcATCaCTggTCACGTGTGACTGtCGaatATgAGCTA---
R:          8   T02010103131313231233121131111212132333233022323122    47        
--
>277_2799_3119_F3	ENSMUST00000113126	-	2599	2623	16	40	50	170	3x3x8x2x9	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                |||X||X|||||||X|X||||||||
T:               ---------------CAGaGGtGTGGTGTgGtGTCAGGGT----------
R:         16   T01220103031310231232031110111202112120010123312212    40        
--
>277_3474_3883_F3	ENSMUST00000113126	-	2595	2627	13	45	50	182	2x5C2x12x2x4C4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                             ||X|||| ||X|||||||||||X|X||| ||||
T:               ------------TAgACAGCGGtGTGGTGTGGTGtCaGGGCGCTG-----
R:         13   T23302010303103021123303111011110113232003332122212    45        
--
>278_190_2943_F3	ENSMUST00000113126	-	2591	2615	16	40	50	170	1x15x4x2x3	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                |X||||||||||||||X|||X|X||
T:               ---------------TgGTGTGGTGTCAGGGtGCTgGgTA----------
R:         16   T00133031111232232011110111212000132003130301202131    40        
--
>278_1067_584_F3	ENSMUST00000113126	+	2324	2352	19	47	50	182	4x4x14C2G3	
G:       2324    GAGACAGGTGCTGGTAATATAGTGTGACAGTGTCTCCAAGTGGTGCTGAG    2352      
                                   ||||X|||X||||||||||||| || |||
T:               ------------------ATAGtGTGaCAGTGTCTCCAAGCGGGGCT---
R:         19   T10123302310303031123323111111211122201023300032232    47        
--
>278_1718_2950_F3	ENSMUST00000113126	+	2604	2622	22	40	50	190	19	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |||||||||||||||||||
T:               ---------------------GACACCACACCACACCTCT----------
R:         22   T23302010303002300113202111011110111102223333222121    40        
--
>278_2674_241_F3	ENSMUST00000113126	-	2593	2629	11	47	50	162	x6x3x3x12x2x2A1C2x4	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                           X|||||X||X||X|||||||||||X|X| | ||X|||
T:               ----------tGTAGAcAGaGGtGTGGTGTGGTGtCaGAGCGCtGGG---
R:         11   T23302010303113223123203111011110112222223333100223    47        
--
>278_3251_2800_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	3x2x15x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||X|X||||||||||||||X|||
T:               --------------GACaGaGGTGTGGTGTGGTGtCAG------------
R:         15   T01002013303012321223201111011110110212331323220321    38        
--
>278_3672_4161_F3	ENSMUST00000113126	+	2205	2224	22	41	50	160	1x11x8	
G:       2205    AGTTAGGAATTGAGGACCTAGCATGTGCCCAGCGTAAGTGCATGCGTGGG    2224      
                                      |X||||||||||X|||||||
T:               ---------------------CaTGTGCCCAGCgTAAGTGC---------
R:         22   T20030201330310332320320311130012301302113303012301    41        
--
>278_3744_3340_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	2x3x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X|||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T23303012303311023123203111011110111212221020220222    38        
--
>279_1546_4130_F3	ENSMUST00000113126	-	2600	2629	11	40	50	180	2x4x3x3x12x2x4	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                           ||X|||X||X||X|||||||||||X|X|||
T:               ----------TGtAGAcAGaGGtGTGGTGTGGTGtCaGGG----------
R:         11   T22132011303133223123203111011110113232000022223033    40        
--
>279_2439_492_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x2x11x3x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||X|X||||||||||X||X||
T:               --------CtGAgAGCTcCaACCACAGCTTtTGtAA--------------
R:          9   T00133031111232232000010111232030133000010203312220    36        
--
>279_3565_3737_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	3x2x3x12x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||X|X||X|||||||||||X|||
T:               --------------GACaGaGGtGTGGTGTGGTGtCAG------------
R:         15   T23302010303331121323203111011110113212330233220120    38        
--
>279_3589_2221_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111232232031110111232000313000233322302230    36        
--
>280_500_1749_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23302010320003010123203111011110111202233323021301    36        
--
>280_930_1881_F3	ENSMUST00000113126	-	2596	2620	19	43	50	170	3x10x2x4x6	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||||||||X|X|||X|||||
T:               ------------------AGGtGTGGTGTGGtGtCAGgGTGCT-------
R:         19   T31020103031310231232031110111102132123011322331222    43        
--
>280_2321_2863_F3	ENSMUST00000113126	-	2597	2625	15	43	50	170	2x3x3x13x3x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               ||X||X||X||||||||||||X||X|X||
T:               --------------GAcAGaGGtGTGGTGTGGTGTcAGgGtGC-------
R:         15   T23302010300300022123203111011110111012303130211320    43        
--
>280_2324_2745_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	14x5x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 ||||||||||||||X||||X||
T:               ----------------CAGAGGTGTGGTGTgGTGTcAG------------
R:         17   T23302010300001122122201111011100111012333133232220    38        
--
>280_3133_2058_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x16x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X|||||||||||||||X||
T:               ----------------CAGaGGTGTGGTGTGGTGTcAG------------
R:         17   T23312010301001313123201111011110111112220010212212    38        
--
>280_4074_1615_F3	ENSMUST00000113126	-	2600	2632	8	40	50	176	1x3T2x2x3x3x15x3	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                        |X|| ||X|X||X||X||||||||||||||X||
T:               -------TgGTTTAgAcAGaGGtGTGGTGTGGTGTCAgGG----------
R:          8   T23312010301003320123203111011110111210003003021202    40        
--
>281_274_3555_F3	ENSMUST00000113126	-	2602	2629	11	38	50	200	4x2x3x3x16	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||||X|X||X||X|||||||||||||||
T:               ----------TGTAgAcAGaGGtGTGGTGTGGTGTCAG------------
R:         11   T23302011303113023123203111011110111212233010100322    38        
--
>281_733_1228_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23302013301301312123203111011110111210123113132122    37        
--
>281_999_3851_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x1x18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||XX|||||||||||||||||
T:               -------------------CTgaCACCACACCACACCTCT----------
R:         20   T23302010303001121123233111011110111102223333232012    40        
--
>281_1221_312_F3	ENSMUST00000113126	+	2583	2621	1	39	50	190	4x4x3x1x5x1x1x3x12x2x3	
G:       2583    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                 ||||X|||X||XX||||XXX||X|||||||||||X|X||
T:               AGGCaAGGtACccAGCAcccTGaCACCACACCACaCcTC-----------
R:          1   T32030020331311231223213111011110112112213303322222    39        
--
>281_1576_3061_F3	ENSMUST00000113126	+	2605	2624	23	42	50	160	12x4x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                       ||||||||||||X|||X|||
T:               ----------------------ACACCACACCACaCCTcTGT--------
R:         23   T23102010301003301323203111011110113102321103333331    42        
--
>281_1888_3683_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000112000110322332211    34        
--
>281_2332_1743_F3	ENSMUST00000113126	-	718	740	15	37	50	170	11x2x3x7	
G:        740    CCTTCTAAGGCCTTGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                               |||||||||||X|X||X||||||
T:               --------------GCAGTAGGCACtGaCAtTGTCAT-------------
R:         15   T13020101032113331213203113111100112131233122220110    37        
--
>281_2458_3529_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	8x10	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||X|||||||||
T:               ----------------------ACACCACAcCACACCTCT----------
R:         23   T23332110300303310323003111011130111102223103130202    40        
--
>281_3095_3228_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23302010303001332123203111011110111213223031233231    37        
--
>281_3424_612_F3	ENSMUST00000113126	-	2597	2622	18	43	50	186	2x3x16C4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                  ||X||X||||||||||||||| ||||
T:               -----------------AGaGGtGTGGTGTGGTGTCAGCGTGC-------
R:         18   T23102010300001111323203111011110111212331133131122    43        
--
>281_3498_1155_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	1x4x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               |X|||X||X||||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T23302010300101331123203111011110111210333231213333    37        
--
>281_4042_3330_F3	ENSMUST00000113126	-	2596	2629	11	44	50	166	4x1x1x3x3x14x2C1x4	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                           ||||XXX||X||X|||||||||||||X| |X|||
T:               ----------TGTAgacAGaGGtGTGGTGTGGTGTCaGCGtGCT------
R:         11   T23302110303113033123203111011110111232333132233012    44        
--
>282_51_2184_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	12x5x2x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       ||||||||||||X||||X|X|||
T:               ----------------------ACACCACACCACaCCTCtGtCTA-----
R:         23   T23122010300002030313203111011110112102231322322232    45        
--
>282_363_3916_F3	ENSMUST00000113126	-	2597	2625	17	45	50	170	2x3x3x10x2x6x3	
G:       2625    AGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAA    2597      
                                 ||X||X||X|||||||||X|X|||||X||
T:               ----------------GAcAGaGGtGTGGTGTGGtGtCAGGGtGC-----
R:         17   T33233020103033311231232031110111102122120001332121    45        
--
>282_659_1069_F3	ENSMUST00000113126	-	2597	2626	14	43	50	160	1x5x3x12x2x2x2x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                              |X||||X||X|||||||||||X|X|X|X||
T:               -------------AgACAGaGGtGTGGTGTGGTGtCaGgGtGC-------
R:         14   T23302010303301021123203111011110112232200133222222    43        
--
>282_1158_2986_F3	ENSMUST00000113126	-	2604	2628	12	36	50	170	1x2x7x1x14	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                            |X|X||||||XX|||||||||||||
T:               -----------GtAgACAGAGgtGTGGTGTGGTGTC--------------
R:         12   T23332010300003021122233111011110111202132333220202    36        
--
>282_2540_5017_F3	ENSMUST00000113126	-	2594	2623	18	47	50	200	1x2x11x10x3x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                  |X|X||||||||||X|||||||||X||X||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAGGGtGCtGG---
R:         18   T02330201030313112322320111101112011121200313010312    47        
--
>282_2870_2978_F3	ENSMUST00000113126	+	2600	2629	18	47	50	186	2x2T14x6x1x4	
G:       2600    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                  ||X| ||||||||||||||X|||||XX|||
T:               -----------------CCcTTACACCACACCACACcTCTGTctACA---
R:         18   T23101010300031001203203111011110111132221131311322    47        
--
>282_3043_4223_F3	ENSMUST00000113126	+	2599	2627	18	46	50	170	1x4x1x13x3x2x5	
G:       2599    AAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACC    2627      
                                  |X|||XX||||||||||||X||X|X||||
T:               -----------------AcCCTgaCACCACACCACAcCTcTgTCTA----
R:         18   T02330201030310312320020111101111011100202312230220    46        
--
>282_3088_3016_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302010303133323123203111011110111212203032222233    38        
--
>282_3555_991_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	16x2x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       ||||||||||||||||X|X||
T:               ----------------------ACACCACACCACACCTcTgTC-------
R:         23   T23322010300301332121203111011110111102023123023132    43        
--
>282_4036_4892_F3	ENSMUST00000113126	-	2744	2774	19	49	50	176	1x4x15C1x3x1x5	
G:       2774    GACGCAGGGCTACATATAAAAGAAGCACACTTGACTCTGAGATGCTTAGG    2744      
                                   |X|||X|||||||||||||| |X||XX||||
T:               ------------------AaAGAaGCACACTTGACTCTCAgATgcTTAG-
R:         19   T32302010303111123123022123111120121222210233020320    49        
--
>283_171_3998_F3	ENSMUST00000113126	-	2604	2623	17	36	50	180	1x19	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |X||||||||||||||||||
T:               ----------------CaGAGGTGTGGTGTGGTGTC--------------
R:         17   T01002013303111020222201111011110111201220123232320    36        
--
>283_1117_2223_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	5x9x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||||X||||||||X|||||||
T:               -----------------CAGAGgTGTGGTGTgGTGTCAG-----------
R:         18   T02330201030313212012223111101112011121223100303000    39        
--
>283_1183_2260_F3	ENSMUST00000113126	-	2594	2625	16	47	50	166	2x3x3x8x8C1x2x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                ||X||X||X|||||||X||||||| |X|X|||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGCGtGcTGG---
R:         16   T31330201030313312012320311101112011121233011210220    47        
--
>284_949_2049_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T0013303111122223203111011123200311300132021.321211    36        
--
>284_1615_1701_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x3x8x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||X|||||||X|||||||||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGGG---------
R:         18   T0233020103031311231232031110111201112120000.202323    41        
--
>284_2635_4483_F3	ENSMUST00000113126	-	2060	2099	9	48	50	210	1x8x1x2x7x9x4x1x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X|||||||XX|X||||||X||||||||X|||XX|X||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAAtCTGccTgTTCA--
R:          9   T0013303111122223203111011121200011301221022.302113    48        
--
>284_3163_4151_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T0013303111122223203111011123200010302212132.102122    36        
--
>284_3756_2521_F3	ENSMUST00000113126	-	2599	2631	6	38	50	196	2x2C1x2x3x3x19	
G:       2631    TTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                      ||X| |X|X||X||X||||||||||||||||||
T:               -----GGtGCAgAcAGaGGtGTGGTGTGGTGTCAGGGT------------
R:          6   T1201030313112312320311101111011121200130020.133222    38        
--
>285_903_3851_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111222232031110111232200113002130212012123    36        
--
>285_1214_3535_F3	ENSMUST00000113126	-	2069	2094	19	44	50	180	4x1x2x9x10	
G:       2094    ATGGATTCTCCCTTATCCAGCTCCAACCACAGCTTTTGTAATCTAAGGAG    2069      
                                   ||||XX|X||||||||X|||||||||
T:               ------------------AGCTccAaCCACAGCTtTTGTAATCT------
R:         19   T02330201030313112312320111101112321001130322212113    44        
--
>285_2374_3292_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	3x3x14x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGG----------
R:         17   T32331010303030123123203111011110111222003213332220    40        
--
>286_248_2408_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T03302013300003301313203111011110111212303032333132    38        
--
>286_525_4915_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	1x5x2x9x8	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X||||X|X||||||||X|||||||
T:               -------------AgACAGaGgTGTGGTGTgGTGTCAG------------
R:         14   T23102010303101121123231111011120111212222332022322    38        
--
>286_1119_2602_F3	ENSMUST00000113126	+	2605	2628	23	46	50	180	15x3x1x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                       |||||||||||||||X||XX||||
T:               ----------------------ACACCACACCACACCtCTgtCTAC----
R:         23   T12110330010303010013103111011110111100220222310212    46        
--
>286_1552_2574_F3	ENSMUST00000113126	-	2601	2623	17	39	50	190	3x3x17	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X||||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAGG-----------
R:         17   T23302010300002020123203111011110111212031322132032    39        
--
>286_1583_2546_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	7x12	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  |||||||X|||||||||||
T:               -----------------AGAGGTGtGGTGTGGTGTC--------------
R:         18   T01002013323012023222201121011110111231210332222322    36        
--
>286_1893_2416_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T23300210301003020123203111011110111102203221032320    39        
--
>286_2098_3033_F3	ENSMUST00000113126	-	729	751	4	26	50	170	5x4x2x12	
G:        751    CCTGCAATATGCAGGCAGTAGGCACTGCGCCTGTGATCTGAGAGACAGGT    729       
                    |||||X|||X|X|||||||||||
T:               ---GCAATaTGCaGgCAGTAGGCACT------------------------
R:          4   T31033103031302231213203112011310133211330230333111    26        
--
>286_2115_2422_F3	ENSMUST00000113126	+	2594	2626	12	44	50	196	1x6x1x2T15x4x3	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                            |X|||||XX| |||||||||||||||X|||X||
T:               -----------CcAGCACccTTACACCACACCACACCtCTGtCT------
R:         12   T33302010303231231123203111011110111103221322122222    44        
--
>286_2267_4101_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T23102010301303002123203111011110111212220233020123    38        
--
>286_2750_1165_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23302010303133323123203111011110111213030131232123    37        
--
>286_2902_2725_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T13302010303331121323203111011110111212203213030303    38        
--
>286_2944_3136_F3	ENSMUST00000113126	-	2601	2626	14	39	50	180	1x5x3x7x10	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                              |X||||X||X||||||X|||||||||
T:               -------------AgACAGaGGtGTGGTGtGGTGTCAGG-----------
R:         14   T23302010303301121123203111011310111212020303231230    39        
--
>286_3242_2887_F3	ENSMUST00000113126	-	2596	2623	18	45	50	200	3x11x8x3x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||||||||||X|||||||X||X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAGgGTgCT-----
R:         18   T02330201030313112312320111101112011121230103232203    45        
--
>286_3320_3865_F3	ENSMUST00000113126	-	2073	2099	9	35	50	190	1x8x1x2x15	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                         |X|||||||XX|X||||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTA---------------
R:          9   T00133031111222232031110111232000113113310101203030    35        
--
>286_4217_4617_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x13x3	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X||||||||||||X||
T:               ------------GAGCTccAaCCACAGCTTTTGtAA--------------
R:         13   T00133031111212232031110111232000133013010213233013    36        
--
>287_689_4276_F3	ENSMUST00000113126	+	2605	2625	23	43	50	190	13x8	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       |||||||||||||X|||||||
T:               ----------------------ACACCACACCACAcCTCTGTC-------
R:         23   T00133033111233212113223111011110111202221121122012    43        
--
>287_814_3446_F3	ENSMUST00000113126	-	2594	2623	17	46	50	186	1x12x5x3A3x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                 |X|||||||||||X||||X|| |||X||||
T:               ----------------CaGAGGTGTGGTGtGGTGtCAAGGTgCTGG----
R:         17   T01032010103310322222201111011310113210201032101002    46        
--
>287_992_1294_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T00202010300033013113203111011110111212222033300021    38        
--
>287_2553_1932_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111232232011110111232000133000120313300131    36        
--
>287_2706_1752_F3	ENSMUST00000113126	-	2596	2620	20	44	50	170	3x7x9x3x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||X||||||X||||||||X||X||
T:               -------------------AGGtGTGGTGtGGTGTCAGgGTgCT------
R:         20   T23102010003303000113203111011210111212201332312302    44        
--
>288_706_1458_F3	ENSMUST00000113126	-	2599	2625	16	42	50	170	2x3x3x8x8x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||X|||||||X|||||||X||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGT--------
R:         16   T02330201030313312312320311101112011121230100102202    42        
--
>288_1925_4574_F3	ENSMUST00000113126	+	2605	2627	23	45	50	176	11x7A4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||X|||||| ||||
T:               ----------------------ACACCACACCAcACCTCTATCTA-----
R:         23   T23323010323023021123203111011110101102223322300331    45        
--
>288_1971_1098_F3	ENSMUST00000113126	-	80	105	23	48	50	180	1x4x11x7x3	
G:        105    TGCTCTGTATTTGAATTTTTAGTCACGTGTGACTGTCGAATATGAGCTAT    80        
                                       |X|||X||||||||||X||||||X||
T:               ----------------------TcACGtGTGACTGTCGaATATGAgCT--
R:         23   T02330201030313312012330111301112121123303331213200    48        
--
>288_2123_2348_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	x5x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||||||||||||||||
T:               --------------gACAGaGGTGTGGTGTGGTGTC--------------
R:         15   T23302010323201021123201111011110111202213032332220    36        
--
>288_3055_2503_F3	ENSMUST00000113126	-	2594	2623	18	47	50	180	3x11x7x1x2x3x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                  |||X||||||||||X||||||XX|X||X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAggGtGCtGG---
R:         18   T02230201030310312312320111101112011121030313310220    47        
--
>288_3980_2983_F3	ENSMUST00000113126	+	1214	1236	14	36	50	170	1x13x5x4	
G:       1214    CATTCAAAGTCAGCATGATCCACAGACTGCGATTCACGACGGATGTGCAG    1236      
                              |X||||||||||||X||||X|||
T:               -------------CaTGATCCACAGACtGCGAtTCA--------------
R:         14   T13020103031310231232011122111332202121303121020123    36        
--
>288_4044_2644_F3	ENSMUST00000113126	+	1191	1211	24	44	50	170	11x6x4	
G:       1191    TACAGGATATGCTTAGCAGCCACCATTACAAGTCATTCAAAGTCAGCATG    1211      
                                        |||||||||||X|||||X|||
T:               -----------------------CATTACAAGTCaTTCAAaGTC------
R:         24   T10030201030303332332320113031102120302103212210100    44        
--
>289_957_3394_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T0013303111123223203111011123230011300301022.33333.    36        
--
>289_1066_4204_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T0013303111122223203111011123200001300323032.21133.    36        
--
>289_2422_2095_F3	ENSMUST00000113126	-	2074	2099	9	34	50	160	1x3x5x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X||X||||XX|X|||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGT----------------
R:          9   T0013303111123223203111011123200011201013022.10012.    34        
--
>290_1362_4496_F3	ENSMUST00000113126	-	2072	2095	12	35	50	180	5x1x2x16	
G:       2095    TCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTTG    2072      
                            |||||XX|X|||||||||||||||
T:               -----------GAGCTccAaCCACAGCTTTTGTAA---------------
R:         12   T01030301112322320311101112320001130100311313322301    35        
--
>291_952_4625_F3	ENSMUST00000113126	-	2074	2098	10	34	50	170	4x4x1x2x14	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                          ||||X|||XX|X|||||||||||||
T:               ---------TGAGaGCTccAaCCACAGCTTTTGT----------------
R:         10   T0233303121122323203111011123200011101113010.3023.1    34        
--
>291_1213_2678_F3	ENSMUST00000113126	+	2604	2625	22	43	50	160	1x13x3x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                      |X||||||||||||X||X||||
T:               ---------------------GaCACCACACCACAcCTcTGTC-------
R:         22   T2310201030100030032310311101111011100202112.0202.3    43        
--
>291_2158_2192_F3	ENSMUST00000113126	+	2604	2627	22	45	50	170	1x16x3x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      |X|||||||||||||||X||X|||
T:               ---------------------GaCACCACACCACACCTcTGtCTA-----
R:         22   T2313201023030300212320311101111011110232102.2330.3    45        
--
>291_2476_1974_F3	ENSMUST00000113126	-	1034	1055	12	33	50	160	4x12x1x5	
G:       1055    CTTTCCTTTTAGTCCACAGCGATGTTAGGCTCAGTGGTTGGTATGATGGA    1034      
                            ||||X|||||||||||XX||||
T:               -----------GTCCaCAGCGATGTTAggCTCA-----------------
R:         12   T2010201030131203112332311031132212031220320.2101.0    33        
--
>291_3067_3720_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2330201032333330212323311101111011110220033.2210.2    39        
--
>291_3110_1714_F3	ENSMUST00000113126	-	2068	2099	14	45	50	170	x5x4x3x9x2x5x4	
G:       2099    ATGGATTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAG    2068      
                              X||||X|||X||X||||||||X|X||||X|||
T:               -------------cTGAGaGCTcCAaCCACAGCTtTtGTAAtCTG-----
R:         14   T0203020103031321223232001110111232302113002.3122.1    45        
--
>292_967_548_F3	ENSMUST00000113126	-	2600	2623	14	37	50	180	3x3x12x6	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCC    2600      
                              |||X||X|||||||||||X|||||
T:               -------------CAGaGGtGTGGTGTGGTGtCAGGG-------------
R:         14   T22010303131123123203111011110113212000101131121221    37        
--
>292_1225_2595_F3	ENSMUST00000113126	-	545	565	22	42	50	170	3x10x8	
G:        565    CCTCTTACCGGTGCCTGCTGTGCAGTTGTACCCACATGACCCTGCTGCTG    545       
                                      |||X|||||||||X|||||||
T:               ---------------------GCAgTTGTACCCAcATGACCC--------
R:         22   T23102010303100032131233111011310012131210000223203    42        
--
>292_1825_4210_F3	ENSMUST00000113126	-	2599	2626	14	41	50	166	2x4C2x8x2x9	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                              ||X||| ||X|||||||X|X||||||||
T:               -------------AGaCAGCGGtGTGGTGTgGtGTCAGGGT---------
R:         14   T23302010300302231123303111011130311212001313023133    41        
--
>292_1938_3190_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000110000221213200201    34        
--
>292_2099_986_F3	ENSMUST00000113126	+	2067	2085	16	34	50	170	16x3	
G:       2067    TCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAA    2085      
                                ||||||||||||||||X||
T:               ---------------GCAGATTACAAAAGCTgTG----------------
R:         16   T12102010303131123122303110002320113000011113230000    34        
--
>292_2765_2522_F3	ENSMUST00000113126	-	2606	2625	15	34	50	160	5x3x12	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||X|||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTG----------------
R:         15   T23302010303131321123203111011110113202331203031232    34        
--
>292_2807_3102_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x13x3x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X||||||||||||X||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTcAGgGT---------
R:         17   T23302010302301022123203111011110111312301312332232    41        
--
>293_138_2558_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||X||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111232232031110111202000113023120222332010    36        
--
>293_844_3456_F3	ENSMUST00000113126	-	718	752	3	37	50	176	2x4x4C1x4x3x4x2x10	
G:        752    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                   ||X|||X||| |X|||X||X|||X|X|||||||||
T:               --AGcAATaTGCCGgCAGtAGgCACtGaCATTGTCAT-------------
R:          3   T10220103031303231203223113111130112131030232130212    37        
--
>293_1380_2643_F3	ENSMUST00000113126	+	2598	2621	16	39	50	152	2x1G2T17	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                ||X || |||||||||||||||||
T:               ---------------CAcGCTTACACCACACCACACCTC-----------
R:         16   T31333200130313311333203111011110111102230331001312    39        
--
>294_329_4306_F3	ENSMUST00000113126	+	536	560	12	36	50	210	5x1x19	
G:        536    TACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAA    560       
                            |||||XX||||||||||||||||||
T:               -----------TGATGgcAAGGGTCATGTGGGTACA--------------
R:         12   T13201030113112312210200121311100131112131202320101    36        
--
>294_353_4232_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x11x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAATC------------
R:          9   T00133031111232232031110111232003113032311202032101    38        
--
>294_1214_2059_F3	ENSMUST00000113126	-	2594	2622	18	46	50	170	2x3x12x2x5x2x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                  ||X||X|||||||||||X|X||||X|X||
T:               -----------------AGaGGtGTGGTGTGGTGtCaGGGTgCtGG----
R:         18   T23302010300303112323203111011110112222001333102103    46        
--
>294_1905_838_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x13x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAATC------------
R:          9   T00133031111202232011110111232000103032130313212222    38        
--
>294_2672_2306_F3	ENSMUST00000113126	-	2595	2625	16	46	50	190	2x3x3x8x8x3x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                ||X||X||X|||||||X|||||||X||X|||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGTgCTG----
R:         16   T31330201030313312312320211101112011121220123212221    46        
--
>294_3249_2421_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T00133031111232232031110111232000133030230221211213    37        
--
>294_3431_1393_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	1x4x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |X|||X||X|||||||||||||X|||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23302010301301031123203111011110111202000333221230    40        
--
>294_3460_2041_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	2x5x3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             ||X||||X||X||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGT---------------
R:         13   T23302010301303321123203111011110111100332333211323    35        
--
>294_3514_2005_F3	ENSMUST00000113126	-	2595	2612	32	49	50	160	12x6	
G:       2612    AAAGAAATTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGA    2595      
                                                ||||||||||||X|||||
T:               -------------------------------TGTGGTGTCAGGgTGCTG-
R:         32   T10031130113302010303231323111203111011121203113212    49        
--
>294_3716_933_F3	ENSMUST00000113126	-	2594	2621	19	46	50	180	4x13x2x1x2x6	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                   ||||X||||||||||||X|XX|X|||||
T:               ------------------GAGGtGTGGTGTGGTGTcAggGtGCTGG----
R:         19   T13330201030303212312202111011110111110302132102200    46        
--
>295_485_2281_F3	ENSMUST00000113126	-	2597	2623	17	43	50	190	3x3x12x6x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                 |||X||X|||||||||||X|||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGtCAGGGtGC-------
R:         17   T2330301030000102212320311101111011321200313.3120.2    43        
--
>295_595_2711_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	3x2x3x12x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||X|X||X|||||||||||X|||
T:               --------------GACaGaGGtGTGGTGTGGTGtCAG------------
R:         15   T1330201030303112132320311101111011221223333.2203.0    38        
--
>295_1381_1128_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223203111011123200010321131321.3022.1    33        
--
>295_2066_4996_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223203111011123200012201220000.2123.0    33        
--
>295_2274_4902_F3	ENSMUST00000113126	+	2595	2622	13	40	50	166	1x5x1x2T12x6	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                             |X||||XX| ||||||||||||X|||||
T:               ------------CaGCACccTTACACCACACCACaCCTCT----------
R:         13   T2000201030303023112320311101111011310222322.2223.2    40        
--
>295_2830_3087_F3	ENSMUST00000113126	+	2602	2621	20	39	50	180	16x4	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    ||||||||||||||||X|||
T:               -------------------CTGACACCACACCACAcCTC-----------
R:         20   T2330201030330102312321211101111011120220032.0033.3    39        
--
>295_3002_4090_F3	ENSMUST00000113126	+	2583	2620	1	38	50	166	2x2x4x2x1x2G2x2x1x3x16	
G:       2583    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                 ||X|X|||X|XX| ||X|XX||X|||||||||||||||
T:               AGgCaAGGtAccCGGCaCccTGaCACCACACCACACCT------------
R:          1   T3213202023030303212321311101111011110232333.2222.2    38        
--
>295_3069_2426_F3	ENSMUST00000113126	-	2597	2625	15	43	50	170	5x3x2x12x2x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               |||||X||X|X|||||||||||X|X|X||
T:               --------------GACAGaGGtGtGGTGTGGTGTCaGgGtGC-------
R:         15   T3203201030310102112320313101111011123220313.3333.1    43        
--
>295_3150_4777_F3	ENSMUST00000113126	-	2073	2095	13	35	50	170	5x1x2x15	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                             |||||XX|X||||||||||||||
T:               ------------GAGCTccAaCCACAGCTTTTGTA---------------
R:         13   T0013303111121223203111011123200011311002322.1101.0    35        
--
>295_3464_2564_F3	ENSMUST00000113126	-	2600	2627	13	40	50	180	7x3x2x10x2x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                             |||||||X||X|X|||||||||X|X|||
T:               ------------TAGACAGaGGtGtGGTGTGGTGtCaGGG----------
R:         13   T2330231030320322112320312101111011020200333.3330.0    40        
--
>295_4157_2122_F3	ENSMUST00000113126	+	2610	2627	23	40	50	160	10x8	
G:       2610    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2627      
                                       ||||||||||X|||||||
T:               ----------------------ACACCACACCtCTGTCTA----------
R:         23   T2330201032313332310320311101111012211223330.0300.2    40        
--
>296_1449_2388_F3	ENSMUST00000113126	-	2595	2625	15	45	50	182	2x3x3x13A3A5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               ||X||X||X|||||||||||| ||| |||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTAAGGATGCTG-----
R:         15   T203020103013013221232021110111101113020231321232..    45        
--
>296_1520_3700_F3	ENSMUST00000113126	-	2603	2629	11	37	50	176	4x2T2x3x15	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                           ||||X| ||X||X||||||||||||||
T:               ----------TGTAgATAGaGGtGTGGTGTGGTGTCA-------------
R:         11   T230020101031130233232031110111101112112213231201..    37        
--
>296_1686_4079_F3	ENSMUST00000113126	-	2604	2634	6	36	50	190	1x5x1x2x1x7x14	
G:       2634    AAATTTCTGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                      |X||||XX|XX||||||X|||||||||||||
T:               -----TcTGGTgtAgaCAGAGGtGTGGTGTGGTGTC--------------
R:          6   T233020121010233011222001110111101112322323132312..    36        
--
>296_1840_3537_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320311101112320001021012232333121..    33        
--
>296_2363_1694_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T233020103010033011232031110111101112002310332332..    36        
--
>296_2447_1911_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	13x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||||||||||||X|||||
T:               -------------------AGGTGTGGTGTGGtGTCAG------------
R:         20   T010020133010103232232011110111103112123223122202..    38        
--
>296_2543_3272_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	14x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||||||X||||
T:               ---------------------GACACCACACCACAcCTCT----------
R:         22   T231020103031031031232021110111101113022223012322..    40        
--
>296_2655_3656_F3	ENSMUST00000113126	+	2586	2622	4	40	50	182	3x2x1x5x1A2x1x2T18	
G:       2586    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                    |||X|XX||||X ||XX| ||||||||||||||||||
T:               ---CAAgGtaCCCAgAACccTTACACCACACCACACCTCT----------
R:          4   T233010103010010201232031110111101111022222033302..    40        
--
>296_2659_1144_F3	ENSMUST00000113126	+	2597	2621	15	39	50	156	2x2x1x2T17	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                               ||X|XX| |||||||||||||||||
T:               --------------GCaCccTTACACCACACCACACCTC-----------
R:         15   T233020103003033321232031110111101111022332322303..    39        
--
>296_2804_3106_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T233020103013003311230031110111101111022232331331..    40        
--
>296_2827_4947_F3	ENSMUST00000113126	+	2597	2630	15	48	50	158	1x2x2x2T13x5C3G3	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                               |X|X|X| |||||||||||||X|||| ||| |||
T:               --------------GcAcCcTTACACCACACCACAcCTCTCTCTGCAC--
R:         15   T233020103213030013032031110111101112022222221311..    48        
--
>296_4076_677_F3	ENSMUST00000113126	-	2067	2099	9	41	50	170	1x3x5x1x2x8x8x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                         |X||X||||XX|X|||||||X|||||||X|X||
T:               --------CtGAgAGCTccAaCCACAGCtTTTGTAAtCtGC---------
R:          9   T001330311112022320311101112300001130021131131322..    41        
--
>297_523_3270_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T231020103033010331232331110111101111022033222223..    39        
--
>297_1738_915_F3	ENSMUST00000113126	-	2074	2099	9	34	50	160	1x3x5x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X||X||||XX|X|||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGT----------------
R:          9   T001330311112322320311101112320001120211101033123..    34        
--
>297_2119_149_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x12x2x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X|||||||||||X|X||||||
T:               -----------------CAGaGGTGTGGTGTGgTgTCAGGG---------
R:         18   T023302010303131123123201111011111131212002212021..    41        
--
>297_2242_384_F3	ENSMUST00000113126	-	2588	2612	22	46	50	176	13A1x2x8	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCTCTCA    2588      
                                      ||||||||||||| |X|X|||||||
T:               ---------------------TGTGGTGTCAGGGAGcTgGGTACCT----
R:         22   T112201030313122312320311101112120022222001310222..    46        
--
>297_2753_3666_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T231020103230011031232031110111101111022033221023..    39        
--
>297_3373_2048_F3	ENSMUST00000113126	+	2601	2626	19	44	50	186	1x16G4x4	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                   |X||||||||||||||| ||||X|||
T:               ------------------CcTGACACCACACCACAGCTCTgTCT------
R:         19   T323020103130011231232121110111101112322231221323..    44        
--
>298_290_988_F3	ENSMUST00000113126	-	2600	2622	21	43	50	170	x7x3x13	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                     X||||||X||X||||||||||||
T:               --------------------aGAGGTGtGGtGTGGTGTCAGGG-------
R:         21   T1022110003002030303302220112103111011121200220231.    43        
--
>298_526_1385_F3	ENSMUST00000113126	-	2591	2612	22	43	50	180	9x8x5	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2591      
                                      |||||||||X|||||||X||||
T:               ---------------------TGTGGTGTCaGGGTGCTgGGTA-------
R:         22   T3102010303131223123203111011120200113220013333002.    43        
--
>298_704_3632_F3	ENSMUST00000113126	-	2603	2625	15	37	50	176	5C14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||||| ||||||||||||||X||
T:               --------------GACAGCGGTGTGGTGTGGTGtCA-------------
R:         15   T1003201030313132112330111101111011221322332200203.    37        
--
>298_887_305_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T0013303111121323030320311101111011121211022303321.    38        
--
>298_935_428_F3	ENSMUST00000113126	-	2596	2625	15	44	50	172	1x3T3x15x3C3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               |X|| |||X||||||||||||||X|| |||
T:               --------------GaCATAGGtGTGGTGTGGTGTCAgGGCGCT------
R:         15   T1310201030230300113320311101111011121000333222132.    44        
--
>298_1013_2259_F3	ENSMUST00000113126	+	2591	2625	9	43	50	190	3x1x7x2x1x2x8x2x9	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                         |||XX||||||X|XX|X|||||||X|X||||||||
T:               --------TACccAGCACCcTgaCaCCACACCaCaCCTCTGTC-------
R:          9   T3012011003131123110323310101111031310222112100233.    43        
--
>298_1124_1696_F3	ENSMUST00000113126	-	720	750	5	35	50	182	3A6x10x1A4x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                     ||| ||||||X|||||||||X ||||X||||
T:               ----CAAAATGCAGgCAGTAGGCAcAGACAtTGTC---------------
R:          5   T1300010003131223121320313122111011230123213100232.    35        
--
>298_2577_81_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T0013303111122223203111011123230011300132030303221.    36        
--
>298_2623_807_F3	ENSMUST00000113126	+	2595	2625	13	43	50	162	1x4x2x2T12x5A3	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                             |X|||X|X| ||||||||||||X|||| |||
T:               ------------CaGCAcCcTTACACCACACCACaCCTCAGTC-------
R:         13   T2002010303131023120320311101111011210221212323022.    43        
--
>298_2751_447_F3	ENSMUST00000113126	-	2596	2623	17	44	50	200	3x3x13x1x8	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 |||X||X||||||||||||XX|||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTcaGGGTGCT------
R:         17   T2330201032100100212320311101111011110200113223121.    44        
--
>298_2984_2002_F3	ENSMUST00000113126	-	79	112	15	48	50	180	2x3x2x11x4x3x3x3x3	
G:        112    GCTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATATGAGCTATT    79        
                               ||X||X|X||||||||||X|||X||X||X||X||
T:               --------------TCaCTgGtCACGTGTGACtGTCgAAtATgAGcTA--
R:         15   T2010201032310212312302211311112111120202333222230.    48        
--
>298_3783_1213_F3	ENSMUST00000113126	+	2599	2627	17	45	50	176	2x1x2T18x1x4	
G:       2599    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                 ||XX| ||||||||||||||||||XX|||
T:               ----------------ACccTTACACCACACCACACCTCTgtCTA-----
R:         17   T2330201030000100011320311101111011110222202232213.    45        
--
>299_349_929_F3	ENSMUST00000113126	-	2319	2335	28	44	50	170	17	
G:       2335    CAGGACCTCATCGGGCTCATCTGTTGGCTGTCACACTATATTACACGGGA    2319      
                                            |||||||||||||||||
T:               ---------------------------CTGTCACACTATATTAC------
R:         28   T0233020103031311231232031330211211112333303123332.    44        
--
>299_652_3465_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x3x5x1x2x13x3x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X||||||||||||X||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAtCT-----------
R:          9   T0013303111120223203111011123200010300220122130112.    39        
--
>299_795_5044_F3	ENSMUST00000113126	-	86	112	15	41	50	170	5x2x2x1x14x3	
G:        112    GCTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATATTTGAAATT    86        
                               |||||X|X|XX|||||||||||||X||
T:               --------------TCACTgGtCacGTGTGACTGTCGAaTA---------
R:         15   T2220201030310112112302220311112121123223321112202.    41        
--
>299_1477_495_F3	ENSMUST00000113126	+	2593	2622	11	40	50	172	3G1x3x1x2T18	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           ||| |X||XX| ||||||||||||||||||
T:               ----------CCCGGcACccTTACACCACACCACACCTCT----------
R:         11   T2330201032200300112320311101111011110222223332233.    40        
--
>299_2325_957_F3	ENSMUST00000113126	-	2596	2623	18	45	50	180	3x3x8x8x2x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||X|||||||X|||||||X|X|||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGgGtGCT-----
R:         18   T3133020103031311231232031110111201112122031320022.    45        
--
>299_2682_812_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2310201030130303112320311101111011120032322312220.    36        
--
>299_2725_3943_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T0233020103031311231232011110111201112133032200133.    38        
--
>299_2942_3694_F3	ENSMUST00000113126	-	2072	2098	10	36	50	190	8x1x2x13x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          ||||||||XX|X||||||||||||X||
T:               ---------TGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:         10   T1113303121122223203111011123200013300122032231232.    36        
--
>300_323_4057_F3	ENSMUST00000113126	-	2602	2622	18	38	50	170	2x3x16	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||X|||||||||||||||
T:               -----------------AGaGGtGTGGTGTGGTGTCAG------------
R:         18   T3311201330100333202320311101111011121223300310122.    38        
--
>300_1602_775_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2333201030303332312320311101111011122223330330230.    36        
--
>300_2216_4582_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T0013303111123223203111011123200012303013001030231.    37        
--
>300_2468_3334_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2330201030230103312320311101111011110220310303321.    39        
--
>300_2675_2428_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2312101030230330032320311101111011110222321011202.    40        
--
>300_2683_1193_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T2330201030310102112320311101111011100002332222200.    35        
--
>300_2989_2498_F3	ENSMUST00000113126	+	2598	2626	16	44	50	162	3x1x2T13x5T3	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                |||XX| |||||||||||||X|||| |||
T:               ---------------CACccTTACACCACACCACAcCTCTTTCT------
R:         16   T2311201030132102112320311101111011100222002212100.    44        
--
>300_2993_2574_F3	ENSMUST00000113126	+	2592	2622	10	40	50	182	1x5x2T1x2T18	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                          |X||||X| |X| ||||||||||||||||||
T:               ---------AcCCAGcATCcTTACACCACACCACACCTCT----------
R:         10   T2331201030300122132320311101111011110222020130223.    40        
--
>301_1371_4868_F3	ENSMUST00000113126	-	2596	2623	17	44	50	180	3x3x13x1x2x6	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 |||X||X||||||||||||XX|X|||||
T:               ----------------CAGaGGtGTGGTGTGGTGTcaGgGTGCT------
R:         17   T33302010303003320123203111011110111002201132333020    44        
--
>301_1371_4868_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	13x4x3x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||X|||X||X||
T:               ----------------------ACACCACACCACAcCTCtGTcTA-----
R:         23   T33302010303003320123203111011110111002201132333020    45        
--
>301_2705_957_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	5x3x2x12	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|X|||||||||||
T:               --------------GACAGaGGtGtGGTGTGGTGTC--------------
R:         15   T23302010303001121123203131011110111233332103330320    36        
--
>301_3159_4973_F3	ENSMUST00000113126	-	2596	2625	16	45	50	220	2x3x3x8x14	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                ||X||X||X|||||||X|||||||||||||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGGGTGCT-----
R:         16   T31330201030313312312320311101112011121200113230320    45        
--
>302_915_1796_F3	ENSMUST00000113126	-	2606	2629	11	34	50	160	4x2x1x2x15	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                           ||||X|XX|X||||||||||||||
T:               ----------TGTAgAcaGaGGTGTGGTGTGGTG----------------
R:         11   T0102101330311332322320111101111011220222333.31313.    34        
--
>302_931_3889_F3	ENSMUST00000113126	+	2598	2622	16	40	50	156	3x1x2T12x6	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                |||XX| ||||||||||||X|||||
T:               ---------------CACccTTACACCACACCACaCCTCT----------
R:         16   T2330201030000330112320311101111011010222303.32332.    40        
--
>302_1189_2185_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T0013303111123223201111011123200011301010030.10221.    36        
--
>302_1630_2906_F3	ENSMUST00000113126	+	2602	2624	20	42	50	170	3x13x4x3	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                    |||X||||||||||||X|||X||
T:               -------------------CTGaCACCACACCACAcCTCtGT--------
R:         20   T2110201031300332311321311101111011130223111.00030.    42        
--
>302_1805_4723_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223201111011123200012100010020.31223.    33        
--
>302_2428_1686_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T2310201030230030012320311101111011121222100.22223.    38        
--
>302_2626_1971_F3	ENSMUST00000113126	-	2596	2617	22	43	50	180	8x2x12	
G:       2617    AATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                      ||||||||X|X|||||||||||
T:               ---------------------TGTGGTGTgGtGTCAGGGTGCT-------
R:         22   T1212010303131123123233111011120211212001132.31022.    43        
--
>302_2755_4687_F3	ENSMUST00000113126	-	2601	2625	16	40	50	170	2x3x11x6x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                ||X||X||||||||||X|||||X||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCaGG----------
R:         16   T0213020103031311231232011110111201112220313.22110.    40        
--
>302_2817_1101_F3	ENSMUST00000113126	-	91	116	10	35	50	160	2x4x3x2x2x13	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                          ||X|||X||X|X|X||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTC---------------
R:         10   T2002010303131323123022313111121211212223013.32232.    35        
--
>302_2889_1266_F3	ENSMUST00000113126	+	2602	2620	20	38	50	170	3x16	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                    |||X|||||||||||||||
T:               -------------------CTGaCACCACACCACACCT------------
R:         20   T2310101032130102212321311101111011110230023.12311.    38        
--
>302_3225_1657_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2310201030200202012320311101111011110220233.21310.    39        
--
>302_3510_1907_F3	ENSMUST00000113126	+	1164	1183	27	46	50	170	5x15	
G:       1164    AGGAGGATTCACAAATTGACATCGCTACAGTACAGGATATGCTTAGCAGC    1183      
                                           |||||X||||||||||||||
T:               --------------------------ACAGTaCAGGATATGCTTAG----
R:         27   T0320210303130323133311313311121111202333132.12021.    46        
--
>302_4020_1754_F3	ENSMUST00000113126	+	2605	2627	23	45	50	180	13x6x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||X|||||X|||
T:               ----------------------ACACCACACCACAcCTCTGtCTA-----
R:         23   T2011010333130303111322311101111011100222102.30322.    45        
--
>303_428_2360_F3	ENSMUST00000113126	-	2595	2621	19	45	50	166	1x3x13A3x6	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                   |X||X|||||||||||| |||X|||||
T:               ------------------GaGGtGTGGTGTGGTGTAAGGgTGCTG-----
R:         19   T2330201030200333031320311101111011130202113.03323.    45        
--
>303_1034_1509_F3	ENSMUST00000113126	+	2592	2624	10	42	50	182	2x3A3x1x2T11x9	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                          ||X|| |||XX| |||||||||||X||||||||
T:               ---------ACcCAACACccTTACACCACACCAcACCTCTGT--------
R:         10   T2310201330130101112320311101111013110222110.23322.    42        
--
>303_1764_3463_F3	ENSMUST00000113126	-	2595	2625	15	45	50	200	2x3x15x2x3x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               ||X||X||||||||||||||X|X||X|||||
T:               --------------GAcAGaGGTGTGGTGTGGTGtCaGGgTGCTG-----
R:         15   T1310201030310112312320111101111011020202113.02310.    45        
--
>303_2083_2253_F3	ENSMUST00000113126	-	719	750	5	36	50	200	4x5x1x4x7x2x9	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     ||||X||||XX|||X||||||X|X||||||||
T:               ----CAATaTGCAggCAGtAGGCACtGaCATTGTCA--------------
R:          5   T1120010303131123120320311111113011210222312.31000.    36        
--
>303_3213_4174_F3	ENSMUST00000113126	+	2913	2934	1	22	50	160	1x5x10x6	
G:       2913    GCAATTTTATATTTAGATATCTTTGAAATTGTAAATGACTAATTTGGTCA    2934      
                 |X||||X|||||||||X|||||
T:               GcAATTtTATATTTAGaTATCT----------------------------
R:          1   T1010301033330032133322311111112012133323013.32010.    22        
--
>304_492_3451_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T21102010300031121123203111011110111220223312120.22    36        
--
>304_994_4863_F3	ENSMUST00000113126	-	1424	1449	20	45	50	166	2x15C1x2x5	
G:       1449    CAAAGAAAACTGAACAGGCAGTACAGGTGCTTGTAGTCATGGCTGAAGAA    1424      
                                    ||X|||||||||||||| |X|X||||
T:               -------------------AGtACAGGTGCTTGTAGCCaTgGCTG-----
R:         20   T01122013303000013223203112011320113230233032110.02    45        
--
>304_1829_3068_F3	ENSMUST00000113126	+	2628	2667	11	50	50	190	1x6x10x1x4x4x4x1x2x2x5	
G:       2628    CCTCTGTCTACACCAGATGCCTCTGCAGACCTCACCATGGTCCCGCCTGT    2667      
                           |X|||||X|||||||||XX|||X|||X|||XX|X|X||||
T:               ----------CaCCAGAtGCCTCTGCAgaCCTcACCaTGGtcCcGcCTGT
R:         11   T10100201230310122013022213101102111003103102320.11    50        
--
>304_2578_1965_F3	ENSMUST00000113126	+	2602	2629	20	47	50	186	3x13x4x1T6	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                    |||X||||||||||||X|||X ||||||
T:               -------------------CTGaCACCACACCACAcCTCtTTCTACA---
R:         20   T23302010310302312303213111011110111002230022311.23    47        
--
>304_2604_4503_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	x19	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      X||||||||||||||||||
T:               ---------------------gACACCACACCACACCTCT----------
R:         22   T23322010300300132223202111011110111102223323012.10    40        
--
>304_2717_4935_F3	ENSMUST00000113126	+	2592	2626	10	44	50	168	5x1G1T1x2T13x6x3	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                          |||||X | |X| |||||||||||||X|||||X||
T:               ---------ACCCAgGATCcTTACACCACACCACAcCTCTGtCT------
R:         10   T20102010301001302323203111011110111302221222012.23    44        
--
>304_3086_3160_F3	ENSMUST00000113126	+	2593	2621	11	39	50	176	3x1x4x1x2T17	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                           |||XX|||XX| |||||||||||||||||
T:               ----------CCCagCACccTTACACCACACCACACCTC-----------
R:         11   T23332010303002331123203111011110111102212232023.23    39        
--
>304_3164_2957_F3	ENSMUST00000113126	-	719	750	5	36	50	172	x3A10x2x5G3x7	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|| ||||||||||X|X|||| |||X||||||
T:               ----cAAAATGCAGGCAGtAgGCACGGACaTTGTCA--------------
R:          5   T10320100031312031203303113021230112100013312202.13    36        
--
>305_1146_373_F3	ENSMUST00000113126	+	2599	2621	12	34	50	176	x7T15	
G:       2599    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2621      
                            X|||||| |||||||||||||||
T:               -----------aCCCTGATACCACACCACACCTC----------------
R:         12   T01032313112310021233101111011110221230023100301.22    34        
--
>305_1193_4743_F3	ENSMUST00000113126	+	2202	2223	13	34	50	160	1x4x4x13	
G:       2202    GAATTGAGGACCTAGCATGTGCCCAGCGTAAGTGCATGCGTGGGTGCGTG    2223      
                             |X|||X|||X||||||||||||
T:               ------------TaGCAtGTGcCCAGCGTAAGTG----------------
R:         13   T11200103031311231211120012331302112110300321322.00    34        
--
>305_1519_122_F3	ENSMUST00000113126	-	2603	2620	20	37	50	180	18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    ||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCA-------------
R:         20   T23302010300022310223201111011110111213230123230.11    37        
--
>305_2123_4108_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x12x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X|||||||||||X|||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAATC------------
R:          9   T00133031111232232011110111232000313032300202102.20    38        
--
>305_2360_1455_F3	ENSMUST00000113126	-	2598	2623	17	42	50	180	2x1x3x16x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                 ||XX||X|||||||||||||||X|||
T:               ----------------CAgaGGtGTGGTGTGGTGTCAGgGTG--------
R:         17   T13302100302020030103203111011110111212201111323.32    42        
--
>305_2487_2743_F3	ENSMUST00000113126	-	2592	2627	14	49	50	190	2x2x3x11x6x2x2x2x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                              ||X|X||X||||||||||X|||||X|X|X|X|||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCaGgGtGcTGGGT-
R:         14   T02330201030310312312320111101112011120220212210.20    49        
--
>305_3409_1468_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010303101131123203111011110111200303232233.12    36        
--
>305_4006_2722_F3	ENSMUST00000113126	-	2603	2620	20	37	50	160	3x15	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    |||X||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCA-------------
R:         20   T10302010300311323123203111011110111213323123000.11    37        
--
>306_360_77_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	x5x2x1x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               X||||X|XX|||||||||||||||
T:               --------------gACAGaGgtGTGGTGTGGTGTCAG------------
R:         15   T23102010300301121123233111011110111212322333332.02    38        
--
>306_592_1305_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	2x2x3x16	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                ||X|X||X|||||||||||||||
T:               ---------------ACaGaGGtGTGGTGTGGTGTCAG------------
R:         16   T23102010302001001323203111011110111212300333022.22    38        
--
>306_754_843_F3	ENSMUST00000113126	-	2593	2614	16	37	50	180	x15x7	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAGA    2593      
                                X||||||||||||||X||||||
T:               ---------------gGTGTGGTGTCAGGGtGCTGGG-------------
R:         16   T01030301112322320111101112120031321003003013320.21    37        
--
>306_907_1185_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	5x3x2x12	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|X|||||||||||
T:               --------------GACAGaGGtGtGGTGTGGTGTC--------------
R:         15   T01322010303331321123203131011110111201233323031.32    36        
--
>306_1147_4022_F3	ENSMUST00000113126	-	2595	2627	14	46	50	190	2x2x3x11x7x3x1x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                              ||X|X||X||||||||||X||||||X||XX|||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAgGGtgCTG----
R:         14   T02330201030310312312320111101112011121100203211.20    46        
--
>306_1619_3316_F3	ENSMUST00000113126	-	2601	2625	15	39	50	190	3x2x15x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||X|X||||||||||||||X||||
T:               --------------GACaGaGGTGTGGTGTGGTGtCAGG-----------
R:         15   T01002013303011021223201111011110110212020130311.33    39        
--
>306_2211_1373_F3	ENSMUST00000113126	+	2605	2628	23	46	50	160	13x4x1x1x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                       |||||||||||||X|||XXX||||
T:               ----------------------ACACCACACCACAcCTCtgtCTAC----
R:         23   T13302010300301032123203111011110111302213222313.30    46        
--
>306_2390_556_F3	ENSMUST00000113126	-	47	76	15	44	50	206	4x9x8x4G4	
G:         76    ATATCTTTGAAATTATGATAGTTGGATTGTCCAAGAAGGCCATCTCACAT    47        
                               ||||X||||||||X|||||||X||| ||||
T:               --------------ATGAtAGTTGGATtGTCCAAGaAGGGCATC------
R:         15   T23020103031310231213210102331120102102003132123.02    44        
--
>306_3611_2570_F3	ENSMUST00000113126	+	2605	2632	23	50	50	176	13x5x2x3G4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                       |||||||||||||X||||X|X|| ||||
T:               ----------------------ACACCACACCACAcCTCTgTcTAGACCA
R:         23   T23302010303020330133203111011110111202220132322.11    50        
--
>306_3812_3489_F3	ENSMUST00000113126	+	2607	2627	27	47	50	170	1x15x5	
G:       2607    AAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACAC    2627      
                                           |X||||||||||||||X||||
T:               --------------------------AcCACACCACACCTCTgTCTA---
R:         27   T10330301130202030313112331320111101111022221223.20    47        
--
>306_4313_1199_F3	ENSMUST00000113126	-	2067	2098	15	46	50	176	3x8x8G2x2x2x6	
G:       2098    ATGGATTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAG    2067      
                               |||X|||||||X||||||| ||X|X|X|||||
T:               --------------TGAgAGCTCCAaCCACAGCGTTtGtAaTCTGC----
R:         15   T13333201030303112322322011101112331021231322.22.1.    46        
--
>307_651_1297_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	3x3x14x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGG----------
R:         17   T23322010301001002123203111011110111202000000313321    40        
--
>307_847_3706_F3	ENSMUST00000113126	-	2599	2623	17	41	50	190	3x3x14x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||||X||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGGT---------
R:         17   T33102010300001310123203111011110111202001220202230    41        
--
>307_1095_2967_F3	ENSMUST00000113126	-	2603	2622	18	37	50	160	2x3x15	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                  ||X||X||||||||||||||
T:               -----------------AGaGGtGTGGTGTGGTGTCA-------------
R:         18   T32302010301001021223203111011110111213023233000201    37        
--
>307_1240_1917_F3	ENSMUST00000113126	+	2604	2624	22	42	50	190	14x7	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                      ||||||||||||||X||||||
T:               ---------------------GACACCACACCACAcCTCTGT--------
R:         22   T23302010301300011123232111011110111002221113222323    42        
--
>307_1540_4634_F3	ENSMUST00000113126	-	2600	2622	19	41	50	190	2x11x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGG---------
R:         19   T02330201030310012332320111101112011121200321302213    41        
--
>307_1915_2987_F3	ENSMUST00000113126	-	2591	2623	17	49	50	176	3x3x14x2x1x1x4C4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                                 |||X||X|||||||||||||X|XXX||| ||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGggtGCTCGGTA-
R:         17   T23302010303133323123203111011110111202233132230133    49        
--
>307_2436_1520_F3	ENSMUST00000113126	-	2602	2622	22	42	50	170	4x6x11	
G:       2622    AAAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAA    2602      
                                      ||||X|||||X||||||||||
T:               ---------------------AGAGgTGTGGtGTGGTGTCAG--------
R:         22   T11010123123302010303022223111103111011121222332301    42        
--
>307_2678_3500_F3	ENSMUST00000113126	-	2599	2624	16	41	50	200	1x3x3x19	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                |X||X||X||||||||||||||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCAGGGT---------
R:         16   T21301010301331113123203111011110111212001302032211    41        
--
>307_2792_3754_F3	ENSMUST00000113126	-	2076	2099	8	31	50	180	1x3x5x15	
G:       2099    TCTCCCTCTGAGAGCTCCAACCACAGCTTTTCACCATGAAGGAGATCTTG    2076      
                        |X||X||||X||||||||||||||
T:               -------CtGAgAGCTcCAACCACAGCTTTT-------------------
R:          8   T21030301112322320010101112320003101101210122222323    31        
--
>307_2812_2585_F3	ENSMUST00000113126	+	2604	2627	22	45	50	200	1x13x10	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      |X||||||||||||X|||||||||
T:               ---------------------GaCACCACACCACAcCTCTGTCTA-----
R:         22   T23102010303001003323201111011110111202221122323312    45        
--
>307_2812_2585_F3	ENSMUST00000113126	-	2598	2620	20	42	50	176	17x2A3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                    |||||||||||||||||X| |||
T:               -------------------AGGTGTGGTGTGGTGTCaGAGTG--------
R:         20   T23102010303001003323201111011110111202221122323312    42        
--
>307_3323_2483_F3	ENSMUST00000113126	-	2068	2098	10	40	50	190	3x5x1x2x15x2x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                          |||X||||XX|X||||||||||||||X|X||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGTAaTcTG----------
R:         10   T00133331111202232031110111232000113130211301323221    40        
--
>307_3432_4202_F3	ENSMUST00000113126	-	2596	2625	15	44	50	186	2x3x3x16x2C3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               ||X||X||X|||||||||||||||X| |||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAGgGCGCT------
R:         15   T30122010300001020123203111011110111212103332333200    44        
--
>308_548_2538_F3	ENSMUST00000113126	+	2945	2967	22	44	50	170	2x1x7x13	
G:       2945    TTTAGATATCTTTGAAATTGTAAATGACTAATTTGGTCATTAAATCTTGT    2967      
                                      ||XX||||||X||||||||||||
T:               ---------------------AAatGACTAAtTTGGTCATTAAA------
R:         22   T02333031111202232031110111212301001012130300202221    44        
--
>308_1466_4872_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T02330201030310112012320111101112011121220320022021    39        
--
>308_1827_2864_F3	ENSMUST00000113126	-	2606	2624	16	34	50	170	4x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                                ||||X||||||||||||||
T:               ---------------ACAGaGGTGTGGTGTGGTG----------------
R:         16   T23302110302301331123201111011110113200221320230031    34        
--
>308_1849_1527_F3	ENSMUST00000113126	-	2595	2620	20	45	50	180	3x13x3x4x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                    |||X||||||||||||X||X|||X||
T:               -------------------AGGtGTGGTGTGGTGTcAGgGTGcTG-----
R:         20   T23102010301003000313203111011110111312301102123322    45        
--
>308_2859_1195_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T02330201030313312312320111101112011121220223301133    39        
--
>309_513_3772_F3	ENSMUST00000113126	-	2601	2623	15	37	50	170	3x3x8x9	
G:       2623    ATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATCC    2601      
                               |||X||X|||||||X||||||||
T:               --------------CAGaGGtGTGGTGTgGTGTCAGG-------------
R:         15   T33021330011112312320311101112011121202331303112.2.    37        
--
>309_905_4518_F3	ENSMUST00000113126	-	2604	2620	21	37	50	170	17	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                     |||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTC-------------
R:         21   T30230201030310112332320111101111011120230021333.3.    37        
--
>309_1091_2763_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T02330201030313332312320111101112011121223320323.3.    39        
--
>309_2572_3255_F3	ENSMUST00000113126	-	2600	2623	18	41	50	200	18x2x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  ||||||||||||||||||X|X|||
T:               -----------------CAGAGGTGTGGTGTGGTGtCaGGG---------
R:         18   T23030201030010112312220111101111011320200222311.0.    41        
--
>310_931_4048_F3	ENSMUST00000113126	+	2605	2627	23	45	50	190	18x2x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       ||||||||||||||||||X|X||
T:               ----------------------ACACCACACCACACCTCTgTcTA-----
R:         23   T01031013331303032223203111011110111102223112301230    45        
--
>310_1023_2718_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	13x4x2x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||X|||X|X|||
T:               ----------------------ACACCACACCACAcCTCtGtCTA-----
R:         23   T03110322232203000303203111011110111002211222333322    45        
--
>310_1227_968_F3	ENSMUST00000113126	-	2604	2629	11	36	50	166	2x1G5x3x14	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||X |||||X||X|||||||||||||
T:               ----------TGtGGACAGaGGtGTGGTGTGGTGTC--------------
R:         11   T23102010300101021120203111011110111201000223320021    36        
--
>310_2921_1704_F3	ENSMUST00000113126	-	771	794	4	27	50	160	x6x2x9x7	
G:        794    TGCATCCAGTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    771       
                    X|||||X|X||||||||X||||||
T:               ---aTCCAGtGgCGGAAAATcCGTGTC-----------------------
R:          4   T22023201231333020003003111211233111233111232302032    27        
--
>310_3273_3635_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T21103010303321020123203111011110111211202102030203    37        
--
>311_576_1233_F3	ENSMUST00000113126	-	2595	2617	23	45	50	176	14x4C4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                       ||||||||||||||X||| ||||
T:               ----------------------TGTGGTGTGGTGTCaGGGCGCTG-----
R:         23   T13102013303201020113203111011110111202003332132.30    45        
--
>311_1109_2545_F3	ENSMUST00000113126	-	2598	2620	21	43	50	170	11x6x2x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                     |||||||||||X|||||X|X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGTG-------
R:         21   T31330201030310112332320111101112011120220112300.21    43        
--
>311_1715_2821_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	6x12x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  ||||||X|||||||||||X||
T:               -----------------CAGAGGtGTGGTGTGGTGtCA------------
R:         18   T21230201030313112312220311101111011221333331033.22    38        
--
>311_3022_2353_F3	ENSMUST00000113126	-	2603	2625	16	38	50	190	2x15x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||||||||||||||X|||||
T:               ---------------GAcAGAGGTGTGGTGTGgTGTCA------------
R:         16   T12030201030313112312220111101111111121320003032.00    38        
--
>311_3451_2055_F3	ENSMUST00000113126	+	2025	2044	24	43	50	160	1x2x17	
G:       2025    ACCATTCTTTGGGGTAGAGGATTGACTATATTATCTTCCTTAAAATCTGT    2044      
                                        |X|X||||||||||||||||
T:               -----------------------GaCtATATTATCTTCCTTAA-------
R:         24   T23101010303031023122333011033330332202020303213.31    43        
--
>312_82_4147_F3	ENSMUST00000113126	-	2062	2099	9	46	50	180	1x8x1x2x2x12x2x1x2x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTTCTT    2062      
                         |X|||||||XX|X|X|||||||||||X|XX|X|X||||
T:               --------CtGAGAGCTccAaCcACAGCTTTTGTaAtcTgCcTGTT----
R:          9   T00133031111222232011113111232000112000233321100033    46        
--
>312_1457_4537_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232011110111232000112303313332000023    34        
--
>312_1701_1763_F3	ENSMUST00000113126	-	2600	2622	19	41	50	190	2x11x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGG---------
R:         19   T00130201330310312332020111101112011121200222323120    41        
--
>312_2249_3376_F3	ENSMUST00000113126	-	2588	2614	17	43	50	190	18x1x3x2x3	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTCTCAAAG    2588      
                                 ||||||||||||||||||XX||X|X||
T:               ----------------GGTGTGGTGTCAGGGTGCtgGGtAcCT-------
R:         17   T00133031111202232011110111212001133300330021102233    43        
--
>312_2467_1133_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232011110111232000101332230123103021    33        
--
>312_2574_1842_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x14x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGG-----------
R:         17   T23300110300301302123203111011110111202033012032001    39        
--
>312_4256_1490_F3	ENSMUST00000113126	-	2065	2099	9	43	50	176	1x3x5x1x2x13x4x2C3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                         |X||X||||XX|X||||||||||||X|||X| |||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAATcTCCCT-------
R:          9   T00133031111202232011110111232000123031220023332301    43        
--
>313_1784_1678_F3	ENSMUST00000113126	-	2596	2622	18	44	50	190	2x17x2x2x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                  ||X||||||||||||||||X|X|X|||
T:               -----------------AGaGGTGTGGTGTGGTGTCaGgGtGCT------
R:         18   T01002013301011020223201111011110111202202132231.01    44        
--
>314_474_4858_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x11x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:          9   T001330311112222320111101112320031330202331333121.1    36        
--
>314_992_4046_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	12x6x1x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       ||||||||||||X|||||XX|||
T:               ----------------------ACACCACACCACaCCTCTgtCTA-----
R:         23   T103200103013012202232031110111101121022232223221.2    45        
--
>314_1113_4970_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x13x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAATC------------
R:          9   T001330311112322320111101112320001330323301301212.1    38        
--
>314_1765_1837_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T023302010320103123120201111011120111212200232210.1    39        
--
>314_2309_1986_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T332020103230310211232031110111101112023031031222.1    36        
--
>314_2410_389_F3	ENSMUST00000113126	-	2601	2624	16	39	50	180	4x3x14x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                ||||X||X|||||||||||||X||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCaGG-----------
R:         16   T233020123003010111232031110111101112220223330333.0    39        
--
>314_2835_4615_F3	ENSMUST00000113126	-	2593	2620	21	48	50	180	11x6x1x3x1x6	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                     |||||||||||X|||||XX||XX|||||
T:               --------------------AGGTGTGGTGTgGTGTCagGGtgCTGGG--
R:         21   T023302010303101123323201111011120111223002332100.0    48        
--
>314_3206_3001_F3	ENSMUST00000113126	-	2597	2620	21	44	50	180	11x6x2x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                     |||||||||||X|||||X|X||||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGTGC------
R:         21   T023302010303101123323201111011120111202201130023.3    44        
--
>314_3512_1405_F3	ENSMUST00000113126	+	2592	2626	12	46	50	182	1x3G3x5T3x1x14x3	
G:       2592    AAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACAC    2626      
                            |X|| |||X|||| |||XX|||||||||||||X||
T:               -----------AcCCGGCAcCCTGTCACcaCACCACACCTCTGtCT----
R:         12   T121122032302000303130021121113111011110222132221.3    46        
--
>314_3681_606_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T130302010303103123323201111011120111212300012232.0    39        
--
>315_1231_3195_F3	ENSMUST00000113126	-	2602	2629	12	39	50	166	2x2x2T2x11x8	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X| ||X||||||||||X|||||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCAG-----------
R:         12   T02230201030310312332320111101112011121232331332.12    39        
--
>315_3503_4325_F3	ENSMUST00000113126	-	2597	2625	15	43	50	176	1x4x3x12x4A4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               |X|||X||X|||||||||||X||| ||||
T:               --------------GaCAGaGGtGTGGTGTGGTGtCAGAGTGC-------
R:         15   T10301012321301331123203111011110112212221133122.20    43        
--
>316_941_4827_F3	ENSMUST00000113126	+	1647	1662	1	16	50	160	16	
G:       1647    GGTGGCCTGCAAGGCCAGGTGGACCGGAGTCCACCAGCATCCTGTAGTGC    1662      
                 ||||||||||||||||
T:               GGTGGCCTGCAAGGCC----------------------------------
R:          1   T10110302131020303032313031223331310111212203222200    16        
--
>316_1312_7_F3	ENSMUST00000113126	-	2070	2099	9	38	50	200	1x8x1x2x13x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X|||||||XX|X||||||||||||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAATC------------
R:          9   T00133031111222232011110111232000133032100332223103    38        
--
>316_2047_2427_F3	ENSMUST00000113126	+	1649	1668	3	22	50	160	5x12x3	
G:       1649    GGTGGCCTGCAAGGCCAGGTGGACCGGAGTCCACCAGCATCCTGTAGTGC    1668      
                   |||||X|||||||||||X||
T:               --TGGCCtGCAAGGCCAGGtGG----------------------------
R:          3   T22010303131020301203103011223200112003333123331313    22        
--
>316_2049_163_F3	ENSMUST00000113126	-	2207	2231	15	39	50	170	1x13x2x3x6	
G:       2231    ACGGATTTTCCGCCCACGCATGCACTTACGCTGGGCACAAAGTTTGGCTT    2207      
                               |X||||||||||||X|X||X|||||
T:               --------------CaCGCATGCACTTAcGcTGgGCACA-----------
R:         15   T01101310023103201331313112033302120311112222232003    39        
--
>317_471_2349_F3	ENSMUST00000113126	-	2591	2629	12	50	50	176	2x1T2x3x3x8x10x1x3x5	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2591      
                            ||X ||X||X||X|||||||X|||||||||XX||X||||
T:               -----------TGtTGAcAGaGGtGTGGTGTgGTGTCAGGGtgCTgGGTA
R:         12   T31100201030310012312020311101112011121200323230..0    50        
--
>317_2294_3395_F3	ENSMUST00000113126	+	2380	2400	1	21	50	170	1x12x8	
G:       2380    CTCCTCATAGCAAGTATGATATGGTCAGCCTGCCTCTCTGACCTATCTCC    2400      
                 |X|||||||||||X|||||||
T:               CtCCTCATAGCAAgTATGATA-----------------------------
R:          1   T23202213323100133123313111011130313201220120323..2    21        
--
>317_4296_843_F3	ENSMUST00000113126	+	2802	2827	19	44	50	160	2x2x4x4x2x12	
G:       2802    TCGACTGAATGAATGCCTCTCTCATTCTGATCTGTTCAGCCAACAGGAGC    2827      
                                   ||X|X|||X|||X|X|||||||||||
T:               ------------------CTcTcATTcTGAtCtGTTCAGCCAAC------
R:         19   T01230201030313212312123130321212311021230101012..2    44        
--
>318_1058_2782_F3	ENSMUST00000113126	-	2699	2716	22	39	50	140	x13x5	
G:       2716    GGTATTAGAAGACGCTCAAACCACAGGTCGTATAAGATACGACTCCGCAA    2699      
                                      X||||||||||||X||||
T:               ---------------------cACAGGTCGTATAaGATA-----------
R:         22   T3310323332010003133133111201231333322332311.33303.    39        
--
>318_1770_5024_F3	ENSMUST00000113126	+	2711	2730	23	42	50	180	2x18	
G:       2711    CCACAGCCGATATCTTATACGACCTGTGTTTAGGACATTTTTTAAATCAT    2730      
                                       ||X|||||||||||||||||
T:               ----------------------CCtGTGTTTAGGACATTTTT--------
R:         23   T2201030013112322120310201111100320211300001.22222.    42        
--
>318_2796_3569_F3	ENSMUST00000113126	+	2700	2729	13	42	50	172	x5x3T1x4C15	
G:       2700    GCCACAGCCGATATCTTATACGACCTGTGTTTAGGACATTTTTTAAATCA    2729      
                             X||||X|| |X||| |||||||||||||||
T:               ------------aTCTTaTATGaCCTCTGTTTAGGACATTTT--------
R:         13   T3201030313112322013331310222110032021130002.32232.    42        
--
>319_1964_3125_F3	ENSMUST00000113126	-	2598	2629	12	43	50	186	2x2x2T2x17x2x4	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                            ||X|X| ||X||||||||||||||||X|X|||
T:               -----------TGtAgATAGaGGTGTGGTGTGGTGTCaGgGTG-------
R:         12   T0232020103031031233232011110111101112022011.312320    43        
--
>319_2163_1053_F3	ENSMUST00000113126	-	2596	2615	16	35	50	180	1x19	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTAAAAATCCCTCAAAG    2596      
                                |X||||||||||||||||||
T:               ---------------TgGTGTGGTGTCAGGGTGCT---------------
R:         16   T0013303111123223201111011121200113230233020.131033    35        
--
>319_3118_4120_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	12x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||X|||||
T:               ----------------------ACACCACACCACaCCTCT----------
R:         23   T2330201030130100312331311101111011310222232.322330    40        
--
>319_3485_1812_F3	ENSMUST00000113126	-	719	750	5	36	50	200	4x5x11x1x1x3x7	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     ||||X||||X||||||||||XXX||X||||||
T:               ----CAATaTGCAgGCAGTAGGCActgACaTTGTCA--------------
R:          5   T1301110303131303121320313322103011210232322.312120    36        
--
>319_4099_4976_F3	ENSMUST00000113126	-	2602	2629	12	39	50	186	2x2x2T13x8	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X| |||||||||||||X|||||||
T:               -----------TGtAgATAGAGGTGTGGTGTgGTGTCAG-----------
R:         12   T0223020103031031233222011110111201112123333.100320    39        
--
>320_182_2391_F3	ENSMUST00000113126	-	2594	2615	16	37	50	160	1x12x2x7	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGAAATCCCTCAAAG    2594      
                                |X|||||||||||X|X||||||
T:               ---------------TgGTGTGGTGTCAgGgTGCTGG-------------
R:         16   T00133031111232232011110111210031132101123322311132    37        
--
>320_358_4254_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121232322111333    39        
--
>320_700_5076_F3	ENSMUST00000113126	-	2599	2623	18	42	50	170	x3x11x8x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  X||X||||||||||X|||||||X||
T:               -----------------cAGaGGTGTGGTGTgGTGTCAGgGT--------
R:         18   T10030201030310112312320111101112011121230130213133    42        
--
>320_789_4517_F3	ENSMUST00000113126	-	2601	2622	19	40	50	180	2x11x9	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                   ||X||||||||||X||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGG----------
R:         19   T02130201030310302332320111101112011121201021221201    40        
--
>320_1532_2077_F3	ENSMUST00000113126	+	2603	2623	21	41	50	210	21	
G:       2603    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                     |||||||||||||||||||||
T:               --------------------TGACACCACACCACACCTCTG---------
R:         21   T23102010300201123123312111011110111102221323123132    41        
--
>320_1697_3453_F3	ENSMUST00000113126	-	2603	2620	21	38	50	180	18	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     ||||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTCA------------
R:         21   T02130201330310312332020111101111011121130332211132    38        
--
>320_1784_2661_F3	ENSMUST00000113126	-	2597	2623	14	40	50	170	3x3x12x4x2x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                              |||X||X|||||||||||X|||X|X||
T:               -------------CAGaGGtGTGGTGTGGTGtCAGgGtGC----------
R:         14   T22010303131123123203111011110113212100133021221011    40        
--
>320_1832_2624_F3	ENSMUST00000113126	-	2323	2361	7	45	50	176	3x1C3x5x1x3x3x3x8x2x6	
G:       2361    GGGTGCTGGGAACTCAGCACCACTTGGAGACACTGTCACACTATAAAGGA    2323      
                       |||X |||X||||XX||X||X||X|||||||X|X|||||
T:               ------TGGgCACTcAGCAccACtTGgAGaCACTGTCaCaCTATA-----
R:          7   T13221031013112312310311101122011121120121233323102    45        
--
>320_3084_1486_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x2x3x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||X||||||||||X|||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T10030201030310312312320111101112011121220323321021    39        
--
>320_3200_1637_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121223313321212    39        
--
>320_3235_3923_F3	ENSMUST00000113126	-	2599	2622	19	42	50	180	2x11x8x3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                   ||X||||||||||X|||||||X||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGgGT--------
R:         19   T02130201030310212332320111101112011121220122323232    42        
--
>320_3314_3880_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02130201030313112312320111101112011121303312122231    38        
--
>320_3366_1497_F3	ENSMUST00000113126	-	2597	2617	24	44	50	170	16x2x3	
G:       2617    GAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                        ||||||||||||||||X|X||
T:               -----------------------TGTGGTGTGGTGTCAGgGtGC------
R:         24   T31330201030310212332320211101111011121230313332232    44        
--
>320_3510_3910_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121221032331232    39        
--
>321_1201_4453_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	x13x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   X||||||||||||X|||||||
T:               ------------------aGAGGTGTGGTGTgGTGTCAG-----------
R:         19   T02130201030310312332220111101112011121223203221310    39        
--
>321_1591_655_F3	ENSMUST00000113126	-	2599	2622	18	41	50	180	2x15x1x6	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                  ||X||||||||||||||XX|||||
T:               -----------------AGaGGTGTGGTGTGGTGtcAGGGT---------
R:         18   T23102013301301330323201111011110113312001323021130    41        
--
>321_2020_4582_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02130201230310112332320111101112011121223313000212    39        
--
>321_2058_4307_F3	ENSMUST00000113126	-	2593	2620	23	50	50	200	3x16x3x2x4	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGG    2593      
                                       |||X|||||||||||||||X||X|X|||
T:               ----------------------AGGtGTGGTGTGGTGTCAGgGTgCtGGG
R:         23   T12323302010303131133123203111011110111212201333100    50        
--
>321_2152_2908_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	5x14	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||||X|||||||||||||
T:               -------------------AGGTGtGGTGTGGTGTCAG------------
R:         20   T01022013300101022223201131011110111212333032221231    38        
--
>321_2196_1319_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x14x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGG-----------
R:         17   T13122010300001332123203111011110111202021322201031    39        
--
>321_2369_3923_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121210222211222    39        
--
>321_2376_1495_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	x3x3x14x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 X||X||X|||||||||||||X||||
T:               ----------------cAGaGGtGTGGTGTGGTGTCaGGGT---------
R:         17   T23102010300301020123203111011110111202001303130320    41        
--
>321_3016_3807_F3	ENSMUST00000113126	-	2599	2620	20	41	50	200	10x12	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                    ||||||||||X|||||||||||
T:               -------------------AGGTGTGGTGtGGTGTCAGGGT---------
R:         20   T01002013303111123223201111011310111212001302131132    41        
--
>321_3076_1787_F3	ENSMUST00000113126	-	2596	2626	14	44	50	196	1x5x3x13G4x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                              |X||||X||X|||||||||||| ||||X|||
T:               -------------AgACAGaGGtGTGGTGTGGTGTGAGGGtGCT------
R:         14   T23102010321101121123200111011110111122003132223133    44        
--
>321_3530_3763_F3	ENSMUST00000113126	-	2600	2624	16	40	50	190	4x6x11x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                ||||X|||||X||||||||||X|||
T:               ---------------ACAGaGGTGTgGTGTGGTGTCaGGG----------
R:         16   T33122010302101131123201112011110111222003323202120    40        
--
>322_3188_2712_F3	ENSMUST00000113126	-	722	750	5	33	50	190	4x6x11x1x4x3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    722       
                     ||||X|||||X||||||||||XX|||X||
T:               ----CAATaTGCAGgCAGTAGGCACtgACAtTG-----------------
R:          5   T2011010303131223121320311322111010310310332.222333    33        
--
>322_3298_3390_F3	ENSMUST00000113126	-	2596	2626	15	45	50	180	1x2x14x4x4x1x5	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                               |X|X|||||||||||||X|||X|||XX||||
T:               --------------AgAcAGAGGTGTGGTGTgGTGtCAGggTGCT-----
R:         15   T0233020123031011231222011110111201102122111.020202    45        
--
>322_3503_3298_F3	ENSMUST00000113126	-	71	89	11	29	50	190	19	
G:         89    TATATTTAGAAATATGAGCTAGAATGATAGACTAATTTGGTCATTAAATC    71        
                           |||||||||||||||||||
T:               ----------AATATGAGCTAGAATGATA---------------------
R:         11   T0133312113103331223232203123311103213122213.322100    29        
--
>322_3885_4587_F3	ENSMUST00000113126	-	2596	2625	16	45	50	190	2x14x1x4x5x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                ||X|||||||||||||XX|||X||||X|||
T:               ---------------GAcAGAGGTGTGGTGTggTGTcAGGGtGCT-----
R:         16   T0233020123031021231222011110111211113120001.023232    45        
--
>323_403_2157_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	13x5x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       |||||||||||||X||||X|||
T:               ----------------------ACACCACACCACAcCTCTgTCT------
R:         23   T23102320301303100323203111011110111202223122030313    44        
--
>323_867_2512_F3	ENSMUST00000113126	-	81	110	16	45	50	200	3x2x2x16x4x3	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCAATTG    81        
                                |||X|X|X|||||||||||||||X|||X||
T:               ---------------ACTgGtCaCGTGTGACTGTCGAAtATGaGC-----
R:         16   T32313103031310231230222131111212112320133102300311    45        
--
>323_1310_2787_F3	ENSMUST00000113126	+	533	562	9	38	50	180	8x2x1x2x3x2x12	
G:        533    TACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAA    562       
                         ||||||||X|XX|X||X|X|||||||||||
T:               --------GTTTGATGgCaaGgGTcAtGTGGGTACAAC------------
R:          9   T20221332010012312303220111111100131101322322031223    38        
--
>323_2185_2306_F3	ENSMUST00000113126	-	720	751	4	35	50	172	1x3A5x12x2x2T5	
G:        751    CCTGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                    |X|| |||||X|||||||||||X|X| |||||
T:               ---GcAAAATGCAgGCAGTAGGCACtGaCTTTGTC---------------
R:          4   T22100100031313031213203113111200112202233331322032    35        
--
>323_2331_2436_F3	ENSMUST00000113126	+	2596	2620	14	38	50	170	1x8x2x11x3	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                              |X|||||||X|X||||||||||X||
T:               -------------AgCACCCTGaCaCCACACCACAcCT------------
R:         14   T22213012033303031100213131011110111202332313232332    38        
--
>323_2972_2163_F3	ENSMUST00000113126	-	1901	1931	20	50	50	176	3A1x6x10x3x2x5	
G:       1931    TGGAGAGCCAGAACGCCTGTTCTTTGTTTGCTTTAAGAAATTTGATCAAG    1901      
                                    ||| |X|||||X|||||||||X||X|X||||
T:               -------------------TTCATtGTTTGcTTTAAGAAAtTTgAtCAAG
R:         20   T31200201230310112332021311100112003022002003212102    50        
--
>323_3440_2315_F3	ENSMUST00000113126	-	2600	2625	24	49	50	180	2x3x3x12x6	
G:       2625    GAAAGAAAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGG    2600      
                                        ||X||X||X|||||||||||X|||||
T:               -----------------------GAcAGaGGtGTGGTGTGGTGtCAGGG-
R:         24   T11212332223302110003031123121203111011110112212000    49        
--
>323_3988_4992_F3	ENSMUST00000113126	-	2597	2623	18	44	50	170	1x2x11x5x5x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                  |X|X||||||||||X||||X||||X||
T:               -----------------CaGaGGTGTGGTGTgGTGTcAGGGtGC------
R:         18   T03230201030310212332320111101112011131200313333310    44        
--
>323_4217_1723_F3	ENSMUST00000113126	+	2601	2630	19	48	50	186	1x2x18x1A4x3	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                   |X|X|||||||||||||||||X ||||X||
T:               ------------------CcTgACACCACACCACACCTCtATCTAcAC--
R:         19   T01030301112322300113202111011110111102203322321122    48        
--
>324_315_4814_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02130201030310312332320111101112011121220323232023    39        
--
>324_613_4093_F3	ENSMUST00000113126	-	1174	1199	5	30	50	166	4x8x2x6C5	
G:       1199    GAGGCTTGTAATGGTGGCTGCTAAGCATATCTGCCTGGCAGTCCCAGCAA    1174      
                     ||||X|||||||X|X||||| |||||
T:               ----CTTGtAATGGTGgCtGCTAACCATAT--------------------
R:          5   T31330201030310112331323010133302231120223122130330    30        
--
>325_210_2704_F3	ENSMUST00000113126	+	2637	2659	14	36	50	170	4x14x2x3	
G:       2637    TCTACACCAGATGCCTCTGCAGACCTCACCATGGTCCCGCCTGTGGCAGC    2659      
                              ||||X|||||||||||||X|X||
T:               -------------CCTCtGCAGACCTCACCAtGgTC--------------
R:         14   T23302032313121022013122102211010111223210302323020    36        
--
>325_1750_4794_F3	ENSMUST00000113126	+	2539	2565	16	42	50	190	10x2x8x4x3	
G:       2539    GCTGCTGCTGCTGCTGCTATACTGAATCAGGGAGAAGGAGAGCAAGCCCT    2565      
                                ||||||||||X|X|||||||X|||X||
T:               ---------------GCTATACTGAaTcAGGGAGAaGGAgAG--------
R:         16   T23103012323003333233312123311200222220232203233220    42        
--
>325_2486_2956_F3	ENSMUST00000113126	-	1960	1978	27	45	50	170	7x12	
G:       1978    ACCGCCTGGAGAAGCAGAGTGAGCCTAGTATACCTGTTTATTAAAAGAGC    1960      
                                           |||||||X|||||||||||
T:               --------------------------AGTATACcTGTTTATTAAA-----
R:         27   T11010303131123223203213011321333112110033030031033    45        
--
>326_342_3364_F3	ENSMUST00000113126	-	2596	2622	19	45	50	170	x4x9x8x2x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                   X|||X||||||||X|||||||X|X|||
T:               ------------------aGAGgTGTGGTGTgGTGTCAGgGtGCT-----
R:         19   T02130201230310112332223111101112011121220013222301    45        
--
>326_552_2451_F3	ENSMUST00000113126	-	2597	2623	16	42	50	182	3C2A15x5	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                ||| || |||||||||||||||X||||
T:               ---------------CAGCGGAGTGGTGTGGTGTCAGgGTGC--------
R:         16   T13020103031311231233022110111101112123011302030132    42        
--
>326_671_2324_F3	ENSMUST00000113126	-	2595	2617	23	45	50	176	8x10C4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                       ||||||||X||||||||| ||||
T:               ----------------------TGTGGTGTgGTGTCAGGGCGCTG-----
R:         23   T23320010303001023123203111011120111212003332123203    45        
--
>326_2022_757_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	4x15	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||X||||||||||||||
T:               ---------------------GACAcCACACCACACCTCT----------
R:         22   T23100013323001013323222113011110111102222233210002    40        
--
>326_2460_4982_F3	ENSMUST00000113126	-	2598	2620	20	42	50	170	3x14x3x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                    |||X|||||||||||||X||X||
T:               -------------------AGGtGTGGTGTGGTGTCaGGgTG--------
R:         20   T23102213030203323313203111011110111202031113313300    42        
--
>326_3859_2312_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232011110111232000123310100022203020    33        
--
>327_2957_2050_F3	ENSMUST00000113126	-	2602	2623	20	41	50	180	6x12x4	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    ||||||X|||||||||||X|||
T:               -------------------CAGAGGtGTGGTGTGGTGtCAG---------
R:         20   T121233020103031313231222031110111101102122133310.2    41        
--
>328_1451_2783_F3	ENSMUST00000113126	-	2594	2620	19	45	50	196	3C7x9x7	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                                   ||| |||||||X||||||||X||||||
T:               ------------------AGGCGTGGTGTgGTGTCAGGgTGCTGG-----
R:         19   T2312010103131023123203311011120111212031132103332.    45        
--
>328_3609_4997_F3	ENSMUST00000113126	-	1023	1050	17	44	50	200	18x2x1x2x5	
G:       1050    CTTTCCTTTTAATAAACAGCGATGTTAGGCTCACTCTGCTTCTCGATGGA    1023      
                                 ||||||||||||||||||X|XX|X||||
T:               ----------------CAGCGATGTTAGGCTCACtCtgCtTCTC------
R:         17   T2330201030313112312332311032032211023330022223000.    44        
--
>329_1406_4735_F3	ENSMUST00000113126	+	2602	2627	20	45	50	166	2x14x2C2x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                    ||X|||||||||||||X| ||X||||
T:               -------------------CTgACACCACACCACAcCCCTgTCTA-----
R:         20   T23302013333333323323202111011110111000020122332201    45        
--
>329_1910_4878_F3	ENSMUST00000113126	-	722	750	5	33	50	190	3x6x3x9x2x6	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    722       
                     |||X|||||X||X||||||||X|X|||||
T:               ----CAAtATGCAgGCaGTAGGCACtGaCATTG-----------------
R:          5   T13000100331310032213203111111130101202001233232001    33        
--
>329_2490_4061_F3	ENSMUST00000113126	-	2591	2623	14	46	50	170	6x11x1x1x1x2x2x3x6	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATCCC    2591      
                              ||||||X||||||||||XXXX|X|X||X|||||
T:               -------------CAGAGGtGTGGTGTGGTgtcaGgGtGCtGGGTA----
R:         14   T22010303131123122203111011110103332300130100132203    46        
--
>330_792_4947_F3	ENSMUST00000113126	+	2608	2625	21	38	50	180	18	
G:       2608    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2625      
                                     ||||||||||||||||||
T:               --------------------CCACACCACACCTCTGTC------------
R:         21   T01002013321011020223201111011110222112300330321231    38        
--
>330_2257_766_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	x5x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||||||||||||||||
T:               --------------gACAGaGGTGTGGTGTGGTGTC--------------
R:         15   T23102013301301321123201111011110111200322133302302    36        
--
>331_474_4505_F3	ENSMUST00000113126	-	717	750	5	38	50	166	x10x10x1x2x2x1C2x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATTTGAGAGACAGGT    717       
                     X|||||||||X|||||||||XX|X|X ||X||||
T:               ----cAATATGCAGgCAGTAGGCActGaCaCTGtCATT------------
R:          5   T10320103331312231213203131111212102130210332332111    38        
--
>331_1175_2535_F3	ENSMUST00000113126	-	2590	2623	14	47	50	180	3x3x10x2x7x2x2x1x4	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTACCCC    2590      
                              |||X||X|||||||||X|X||||||X|X|XX|||
T:               -------------CAGaGGtGTGGTGTGGtGtCAGGGTgCtGggTAC---
R:         14   T01110301131323123203111011110010212001030121131302    47        
--
>331_2184_4682_F3	ENSMUST00000113126	-	2601	2627	14	40	50	176	2x2T13x4x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                              ||X| |||||||||||||X|||X||||
T:               -------------TAgATAGAGGTGTGGTGTgGTGtCAGG----------
R:         14   T02130201230310312332220111101112011321203313030201    40        
--
>331_2580_2860_F3	ENSMUST00000113126	+	2602	2622	20	40	50	190	2x19	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||X||||||||||||||||||
T:               -------------------CTgACACCACACCACACCTCT----------
R:         20   T23302010301001303123202111011110111102222332032213    40        
--
>331_2895_3456_F3	ENSMUST00000113126	-	719	753	2	36	50	230	2x1x9x1x11x2x9	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  ||XX||||||||XX||||||||||X|X||||||||
T:               -CAgcAATATGCAggCAGTAGGCACtGaCATTGTCA--------------
R:          2   T13100103331310331213203111111130112100330123311000    36        
--
>331_3791_1574_F3	ENSMUST00000113126	-	2602	2623	20	41	50	160	3x3x8x8	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |||X||X|||||||X|||||||
T:               -------------------CAGaGGtGTGGTGTgGTGTCAG---------
R:         20   T12323302010303131033123203111011120111212223312331    41        
--
>331_3903_3473_F3	ENSMUST00000113126	-	2532	2553	1	22	50	160	4x2x5x11	
G:       2553    CTGATTCAGTATAGCAGCAGCAGCAGTGCCCTCTGCAGCTGAATAACCCC    2532      
                 ||||X|X||||X||||||||||
T:               CTGAtTcAGTAtAGCAGCAGCA----------------------------
R:          1   T22121031213132312312313101132013321231300220100122    22        
--
>331_4305_3531_F3	ENSMUST00000113126	+	2598	2631	16	49	50	206	1x3x2T16x2x1x8	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                                |X||X| ||||||||||||||||X|XX|||||||
T:               ---------------CaCCcTTACACCACACCACACCTcTgtCTACACC-
R:         16   T11102323002013300103203111011110111102120222311102    49        
--
>332_1743_2896_F3	ENSMUST00000113126	-	2596	2620	21	45	50	190	11x6x3x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||X||X||||
T:               --------------------AGGTGTGGTGTgGTGTCaGGgTGCT-----
R:         21   T11230201030310112032320111101112011123203113202323    45        
--
>332_3091_1536_F3	ENSMUST00000113126	-	2070	2099	9	38	50	160	1x3x5x1x2x11x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||||||X|X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAATC------------
R:          9   T00133031111232232011110111232003133032300103112112    38        
--
>332_3866_1548_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111222232011110111232000133011231223102322    36        
--
>333_501_2843_F3	ENSMUST00000113126	+	1603	1628	15	40	50	186	4T5x10x6	
G:       1603    GAAGGAGAAGAAATCAGGGCAGCAGTGACACTGGCCTCTAGTCTGGTGCC    1628      
                               |||| |||||X|||||||||X|||||
T:               --------------CAGGTCAGCAgTGACACTGGcCTCTA----------
R:         15   T13130201030310012012123111121112100022230000011130    40        
--
>333_1341_2269_F3	ENSMUST00000113126	-	2602	2618	27	43	50	170	17	
G:       2618    GAAAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAA    2602      
                                           |||||||||||||||||
T:               --------------------------GTGTGGTGTGGTGTCAG-------
R:         27   T13131011232330201033223303311110111101112123233302    43        
--
>333_1388_1133_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x8x1x2x13x1x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X|||||||XX|X||||||||||||XX|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtaATC------------
R:          9   T00133031111222232011110111232000122032320201321112    38        
--
>333_1402_2163_F3	ENSMUST00000113126	-	2242	2266	12	36	50	170	2x13x1x4x5	
G:       2266    TGCATATTGCTGGCTACGCACGCACGCACGCACGCAATTTTCCGCCACTG    2242      
                            ||X||||||||||||XX|||X||||
T:               -----------GGcTACGCACGCACGcaCGCaCGCA--------------
R:         12   T23330103331301231331133113231330133121000230101303    36        
--
>333_1794_1005_F3	ENSMUST00000113126	+	1964	1979	33	48	50	160	16	
G:       1964    CAAAAGTGTACATTTCTCTTTCTTTCCTTTTAATAAACAGGTATACTCTT    1979      
                                                 ||||||||||||||||
T:               --------------------------------ATAAACAGGTATACTC--
R:         33   T02330201030310232333103102011330233001120133312232    48        
--
>333_1930_3727_F3	ENSMUST00000113126	-	2600	2622	19	41	50	170	x5x8x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   X||||X|||||||X|||||||||
T:               ------------------aGAGGtGTGGTGTgGTGTCAGGG---------
R:         19   T22130201030310112332220311101112011121200032223121    41        
--
>333_3160_2511_F3	ENSMUST00000113126	-	770	794	4	28	50	170	1x3x4x4x13	
G:        794    TGCATCCAGTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    770       
                    |X||X|||X|||X||||||||||||
T:               ---AtCCaGTGgCGGaAAATCCGTGTCG----------------------
R:          4   T23130200211133030003203111231233103312000233222221    28        
--
>335_3324_396_F3	ENSMUST00000113126	-	2593	2622	18	47	50	180	2x13x1x3x2x2x7	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                  ||X||||||||||||XX||X|X|X||||||
T:               -----------------AGaGGTGTGGTGTGGtgTCaGgGtGCTGGG---
R:         18   T01001013320011020223201111011110321232100132100202    47        
--
>336_867_4425_F3	ENSMUST00000113126	-	2598	2625	16	43	50	206	2x15T4x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                ||X|||||||||||||| ||||X|||||
T:               ---------------GAcAGAGGTGTGGTGTGTTGTCaGGGTG-------
R:         16   T3102020123031331201222011110111110112220011.3303..    43        
--
>336_1106_3112_F3	ENSMUST00000113126	+	2594	2613	24	43	50	180	4x16	
G:       2594    CCTGGGCAGAAAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCT    2613      
                                        ||||X|||||||||||||||
T:               -----------------------CCAGcACCCTGACACCACAC-------
R:         24   T3131131101001330200300010121110021211101111.0222..    43        
--
>336_1394_672_F3	ENSMUST00000113126	-	2602	2626	15	39	50	190	1x5x11x8	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                               |X||||X||||||||||X|||||||
T:               --------------AgACAGaGGTGTGGTGTgGTGTCAG-----------
R:         15   T0213020103031011211232011110111201112122023.0302..    39        
--
>336_1442_3442_F3	ENSMUST00000113126	-	2603	2627	14	38	50	170	2x2x3x14x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X|X||X|||||||||||||X|||
T:               -------------TAgAcAGaGGTGTGGTGTGGTgTCA------------
R:         14   T0233020103031031231232011110111101012133303.2303..    38        
--
>336_2011_4597_F3	ENSMUST00000113126	-	2598	2625	14	41	50	166	2x3x3x8x8C3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                              ||X||X||X|||||||X||||||| |||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGCGTG---------
R:         14   T0012010303131020123203111011120111212331112.3221..    41        
--
>336_2070_3704_F3	ENSMUST00000113126	-	2601	2620	20	39	50	180	3x17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||X||||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAGG-----------
R:         20   T1030201030331102312320311101111011121202012.1220..    39        
--
>336_2295_3137_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2330001030330100111330311101111011110222032.0310..    40        
--
>336_2555_3886_F3	ENSMUST00000113126	-	730	750	5	25	50	170	4x6x11	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||X|||||X||||||||||
T:               ----CAATaTGCAGgCAGTAGGCAC-------------------------
R:          5   T1012010303131223121320311321120033212131100.2313..    25        
--
>336_2989_4119_F3	ENSMUST00000113126	-	2602	2629	12	39	50	186	2x2x2T2x19	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X| ||X||||||||||||||||||
T:               -----------TGtAgATAGaGGTGTGGTGTGGTGTCAG-----------
R:         12   T0223020103031031233232011110111101112123331.3133..    39        
--
>336_3087_2959_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T0233020103031011233232011110111201112320031.2122..    41        
--
>336_3132_2983_F3	ENSMUST00000113126	+	2594	2622	12	40	50	170	4x1x2x1x3x15x3	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            ||||XX|XX||X||||||||||||||X||
T:               -----------CCAGcaCccTGaCACCACACCACACCtCT----------
R:         12   T1030101330330122312321311101111011110322211.3022..    40        
--
>336_3253_4015_F3	ENSMUST00000113126	-	2602	2623	20	41	50	180	3x3x16	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |||X||X|||||||||||||||
T:               -------------------CAGaGGtGTGGTGTGGTGTCAG---------
R:         20   T2112330222030333102312320311101111011121222.3233..    41        
--
>336_3881_2748_F3	ENSMUST00000113126	+	637	665	13	41	50	190	6x7x2x8x1x5	
G:        637    TGACCGTGGTGACCATGGCCAGCGCCAGGGTGCAGGACCTCATCGGGCTC    665       
                             ||||||X||||||X|X|||||||XX||||
T:               ------------CCATGGcCAGCGCcAgGGTGCAGgaCCTC---------
R:         13   T1232330201030013101012333111001131221102232.1321..    41        
--
>337_1556_2602_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02130201030310312332320111101112011121221120022332    39        
--
>337_3613_2347_F3	ENSMUST00000113126	-	2593	2627	14	48	50	176	2x2T2x11x5x3x2x1x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                              ||X| ||X||||||||||X||||X||X|XX|||||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTcAGgGtgCTGGG--
R:         14   T02330201030310312332320111101112011131220023210033    48        
--
>338_1772_2405_F3	ENSMUST00000113126	-	2072	2094	14	36	50	170	4x1x2x16	
G:       2094    TTCTCCCTTATCCAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                              ||||XX|X|||||||||||||||
T:               -------------AGCTccAaCCACAGCTTTTGTAA--------------
R:         14   T22123031011203232031110111232000113013311301310102    36        
--
>338_2068_1649_F3	ENSMUST00000113126	-	2596	2622	19	45	50	176	2x11x8x2C3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                   ||X||||||||||X|||||||X| |||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGgGCGCT-----
R:         19   T02130201130310312332320111101112011121220333231331    45        
--
>338_2715_1092_F3	ENSMUST00000113126	-	2601	2620	21	40	50	180	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T02130201030310112312320111101112011121203203300311    40        
--
>338_2931_274_F3	ENSMUST00000113126	-	2072	2100	8	36	50	170	2x3x1x4x1x2x16	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                        ||X||XX|||XX|X|||||||||||||||
T:               -------TCtGAgaGCTccAaCCACAGCTTTTGTAA--------------
R:          8   T23003031211213232031110111232000113013131223001120    36        
--
>339_211_4128_F3	ENSMUST00000113126	-	2602	2623	20	41	50	180	3x3x16	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |||X||X|||||||||||||||
T:               -------------------CAGaGGtGTGGTGTGGTGTCAG---------
R:         20   T12323302010303131033123203111011110111212223232301    41        
--
>339_353_4015_F3	ENSMUST00000113126	-	2600	2622	19	41	50	170	2x11x6x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||X|||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGGG---------
R:         19   T02230201230310312332320111101112011122200312200231    41        
--
>339_1960_3473_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x16x3	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||X|||||||||||||||X||
T:               -------------------CTgACACCACACCACACCtCT----------
R:         20   T32233020103033311233202111011110111103222333032011    40        
--
>339_2516_2000_F3	ENSMUST00000113126	-	2601	2626	20	45	50	180	1x2x6x8x9	
G:       2626    AGAAAGAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAA    2601      
                                    |X|X|||||X|||||||X||||||||
T:               -------------------AgAcAGAGGtGTGGTGTgGTGTCAGG-----
R:         20   T31013133202010300231123122203111011120111212033202    45        
--
>339_2568_3326_F3	ENSMUST00000113126	-	2600	2627	14	41	50	166	2x2T2x11x5x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X| ||X||||||||||X||||X||||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTcAGGG---------
R:         14   T31330201030310312332320111101112011101200323223200    41        
--
>339_3525_1498_F3	ENSMUST00000113126	-	334	361	15	42	50	186	2x13C1x4x7	
G:        361    AGACCTCACCATGGTTTTTGCATTTGATCTGGTTTTGTCTCTGGGCCACA    334       
                               ||X|||||||||||| |X|||X||||||
T:               --------------TTtTTGCATTTGATCCGgTTTtGTCTCT--------
R:         15   T02311123233020103001313001232031100111222202122213    42        
--
>339_4173_3097_F3	ENSMUST00000113126	-	2601	2622	19	40	50	180	x13x9	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                   X||||||||||||X||||||||
T:               ------------------aGAGGTGTGGTGTgGTGTCAGG----------
R:         19   T02130201030310112322220111101112011121203321022221    40        
--
>340_947_2023_F3	ENSMUST00000113126	-	2597	2620	21	44	50	200	16x5x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                     ||||||||||||||||X||||X||
T:               --------------------AGGTGTGGTGTGGTGTcAGGGtGC------
R:         21   T02030201130310312332320111101111011131200213122023    44        
--
>340_1172_3920_F3	ENSMUST00000113126	-	82	110	16	44	50	176	3x2x2x13A4x4	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    82        
                                |||X|X|X|||||||||||| ||||X|||
T:               ---------------ACTgGtCaCGTGTGACTGTCAAATAtGAG------
R:         16   T23101013031311231230223131111212112100330122233012    44        
--
>340_1630_3267_F3	ENSMUST00000113126	-	2602	2617	26	41	50	160	16	
G:       2617    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                          ||||||||||||||||
T:               -------------------------TGTGGTGTGGTGTCAG---------
R:         26   T02223302210320131033123203111011110111212222332312    41        
--
>340_2437_4334_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	x13x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   X||||||||||||X|||||||
T:               ------------------aGAGGTGTGGTGTgGTGTCAG-----------
R:         19   T02130201030310312332220111101112011121230323232330    39        
--
>340_2639_2410_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T13030201030310312332320111101112011121232030310122    39        
--
>340_2684_1839_F3	ENSMUST00000113126	+	2602	2620	20	38	50	170	3x16	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                    |||X|||||||||||||||
T:               -------------------CTGaCACCACACCACACCT------------
R:         20   T23102013321303020213213111011110111102323023033332    38        
--
>340_3631_1736_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T02130201030310312332320111101112011120200201333130    41        
--
>340_3885_1312_F3	ENSMUST00000113126	-	2600	2629	9	38	50	180	3x1x2x3x3x12x6	
G:       2629    ATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCC    2600      
                         |||XX|X||X||X|||||||||||X|||||
T:               --------TGTagAcAGaGGtGTGGTGTGGTGtCAGGG------------
R:          9   T31221030011112312320311101111011021200330003033121    38        
--
>341_286_1959_F3	ENSMUST00000113126	-	2596	2620	19	43	50	190	3x4x4x14	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||X|||X|||||||||||||
T:               ------------------AGGtGTGgTGTgGTGTCAGGGTGCT-------
R:         19   T13020103031310231232031111111201112120011322022322    43        
--
>341_1419_3245_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x9x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||X|||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAAT-------------
R:          9   T00133031111202232011110111232300113031030012222021    37        
--
>341_1484_2652_F3	ENSMUST00000113126	-	2594	2624	19	49	50	210	1x6x12x2x5x5	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGA    2594      
                                   |X|||||X|||||||||||X|X||||X||||
T:               ------------------AcAGAGGtGTGGTGTGGTGtCaGGGTgCTGG-
R:         19   T12233302010300331333122203111011110112222001232101    49        
--
>341_2413_4085_F3	ENSMUST00000113126	-	2594	2620	21	47	50	176	11x8x2x1C4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                     |||||||||||X|||||||X|X ||||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGtCCTGG---
R:         21   T02330201030310112332320111101112011121230320210122    47        
--
>341_2423_1913_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T22130201030310112332320111101112011121230330321132    39        
--
>341_2760_1014_F3	ENSMUST00000113126	-	2126	2154	5	33	50	176	1x10x1C9x2x5	
G:       2154    GGTCACTTATTTAAACAAATGGCACAGTTAAACATAAATGCTGCTCATGG    2126      
                     |X|||||||||X |||||||||X|X||||
T:               ----AcTTATTTAAAcCAATGGCACAgTtAAAC-----------------
R:          5   T23130220330030020103103111011300113313201231102222    33        
--
>341_3811_2532_F3	ENSMUST00000113126	+	2597	2622	15	40	50	186	4x1x2T18	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                               ||||XX| ||||||||||||||||||
T:               --------------GCACccTTACACCACACCACACCTCT----------
R:         15   T23302010321303031123203111011110111102223321222020    40        
--
>342_406_4023_F3	ENSMUST00000113126	+	2592	2622	10	40	50	182	5x1x2T1x2T18	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                          |||||XX| |X| ||||||||||||||||||
T:               ---------ACCCAgcATCcTTACACCACACCACACCTCT----------
R:         10   T11100010301001001323203111011110111102220332302310    40        
--
>342_480_3153_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x10x6	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X|||||||||X|||||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAG-------------
R:         14   T12120103031313231232031110111102112123333133312022    37        
--
>342_1158_1253_F3	ENSMUST00000113126	-	2594	2620	20	46	50	190	3x14x4x1x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                    |||X|||||||||||||X|||XX||||
T:               -------------------AGGtGTGGTGTGGTGTCaGGGtgCTGG----
R:         20   T03102013300003010123203111011110111202003032102223    46        
--
>342_2653_3350_F3	ENSMUST00000113126	-	2601	2631	9	39	50	170	4x2x2x3x3x12x2x3	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                         ||||X|X|X||X||X|||||||||||X|X||
T:               --------GGTGtAgAcAGaGGtGTGGTGTGGTGtCaGG-----------
R:          9   T00201010301133323123203111011110113232020220231322    39        
--
>342_2939_2220_F3	ENSMUST00000113126	-	2595	2620	21	46	50	180	11x8x2x1x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X|||||||X|XX|||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGtgCTG----
R:         21   T02330201030310112332320111101112011121230033213323    46        
--
>342_3477_618_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	3x2x3x12x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||X|X||X|||||||||||X||||
T:               --------------GACaGaGGtGTGGTGTGGTGtCAGG-----------
R:         15   T23302010300301121323203111011110110212022133032301    39        
--
>342_3592_1726_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23102010321003031123203111011110111200320322122133    36        
--
>343_464_1505_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232011110111232000132103130213301230    33        
--
>343_1326_2285_F3	ENSMUST00000113126	-	2596	2625	15	44	50	180	5x3x12x2x2x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               |||||X||X|||||||||||X|X|X|X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGgGtGCT------
R:         15   T23102010303031021123203111011110112202300132333031    44        
--
>343_1911_3260_F3	ENSMUST00000113126	-	1869	1893	1	25	50	190	14x2x5x4	
G:       1893    GAGATGTCTGGCATGGCTATGTACAAATTGACATCGCTACAGTACAGGAT    1869      
                 ||||||||||||||X|X||||X|||
T:               GAGATGTCTGGCATgGcTATGtACA-------------------------
R:          1   T12223112210313200233123111021301112311231222320312    25        
--
>343_2703_107_F3	ENSMUST00000113126	-	2070	2099	9	38	50	166	1x3T4x1x2x14x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X|| ||||XX|X|||||||||||||X|||
T:               --------CtGATAGCTccAaCCACAGCTTTTGTaATC------------
R:          9   T33123031011233232031110111232000112032330300102221    38        
--
>343_3387_4763_F3	ENSMUST00000113126	-	2602	2626	24	48	50	170	x3x4x10x8	
G:       2626    GGAAAGAAAGAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTT    2602      
                                        X||X|||X|||||||||X|||||||
T:               -----------------------aGAcAGAgGTGTGGTGTgGTGTCAG--
R:         24   T22210332222320201030313122312230111101112011121232    48        
--
>343_3894_2558_F3	ENSMUST00000113126	-	2600	2631	10	41	50	172	2x2C1x2x14x5A4	
G:       2631    GAAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                          ||X| |X|X|||||||||||||X|||| ||||
T:               ---------GGtGCAgAcAGAGGTGTGGTGTgGTGTAAGGG---------
R:         10   T02030201030313112312220111101112011130200211223102    41        
--
>344_666_4327_F3	ENSMUST00000113126	-	2601	2623	18	40	50	170	x14x3x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  X|||||||||||||X||X|||||
T:               -----------------cAGAGGTGTGGTGTgGTgTCAGG----------
R:         18   T02330201030310112312220111101112012121202203220122    40        
--
>344_1037_1757_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121223313300210    39        
--
>344_1083_2662_F3	ENSMUST00000113126	-	2598	2620	21	43	50	170	11x6x2x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                     |||||||||||X|||||X|X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGTG-------
R:         21   T02330201030310112332320111101112011120230110232232    43        
--
>344_2272_3478_F3	ENSMUST00000113126	-	2594	2627	14	47	50	172	2x2T2x11x6C2x3x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                              ||X| ||X||||||||||X||||| ||X||X|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCCGGgTGcTGG---
R:         14   T02330201030310312332320111101112011120303111210232    47        
--
>344_2304_2721_F3	ENSMUST00000113126	+	2605	2624	23	42	50	180	17x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                       |||||||||||||||||X||
T:               ----------------------ACACCACACCACACCTCtGT--------
R:         23   T01002013301011330223201111011110111102231102003103    42        
--
>344_2393_1882_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	2x3x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               ||X||X||X|||||||||||||X|||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23102010300001022123202111011110111202002032222222    40        
--
>344_3279_4273_F3	ENSMUST00000113126	-	2597	2627	14	44	50	170	2x3x2x11x5x1x2x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                              ||X||X|X||||||||||X||||XX|X||||
T:               -------------TAgACaGaGGTGTGGTGTgGTGTcaGgGTGC------
R:         14   T02330201030310312132020111101112011133230113032000    44        
--
>345_2280_2268_F3	ENSMUST00000113126	-	2602	2625	14	37	50	180	2x3x11x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||||||||||X|||||||
T:               -------------GAcAGaGGTGTGGTGTgGTGTCAG-------------
R:         14   T1302010303131323123201111011120111212320133.303221    37        
--
>345_2925_3691_F3	ENSMUST00000113126	-	2599	2623	14	38	50	170	1x2x3x16x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                              |X|X||X|||||||||||||||X||
T:               -------------CaGaGGtGTGGTGTGGTGTCAGgGT------------
R:         14   T2201030313112332320311101111011121210131312.022103    38        
--
>346_139_383_F3	ENSMUST00000113126	+	2605	2630	22	47	50	160	13x2x1x2x3x5	
G:       2605    GGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAG    2630      
                                      |||||||||||||X|XX|X||X||||
T:               ---------------------ACACCACACCACAcCtcTgTCtACAC---
R:         22   T23302112131311231332031110111101113003201203111321    47        
--
>346_3520_3925_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T02130201330310112332120111101112011121230033311120    39        
--
>346_3533_5013_F3	ENSMUST00000113126	-	2596	2623	18	45	50	180	3x3x8x2x8x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||X|||||||X|X|||||||X|||
T:               -----------------CAGaGGtGTGGTGTgGtGTCAGGGtGCT-----
R:         18   T21230202030310112312320311101112021121200313223100    45        
--
>346_3573_3939_F3	ENSMUST00000113126	-	2600	2627	14	41	50	166	2x2T2x11x2x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X| ||X||||||||||X|X|||||||
T:               -------------TAgATAGaGGTGTGGTGTgGtGTCAGGG---------
R:         14   T02330201030310302332320111101112031121200312200323    41        
--
>347_494_4453_F3	ENSMUST00000113126	+	630	648	29	47	50	170	6x13	
G:        630    CAGCCAGGACAGACTGCTGCCAATGACCGTGGTGACCATGGCCAGCGCCA    648       
                                             ||||||X||||||||||||
T:               ----------------------------GTGGTGaCCATGGCCAGCG---
R:         29   T20303303220201030121223013321110111101310301233202    47        
--
>347_770_1462_F3	ENSMUST00000113126	-	2596	2623	19	46	50	200	3x3x10x2x10	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAA    2596      
                                   |||X||X|||||||||X|X|||||||||
T:               ------------------CAGaGGtGTGGTGTGGtGtCAGGGTGCT----
R:         19   T00233022133003311231232031110111102102120011322031    46        
--
>347_3431_837_F3	ENSMUST00000113126	-	2602	2622	18	38	50	170	2x5x14	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||||X|||||||||||||
T:               -----------------AGaGGTGtGGTGTGGTGTCAG------------
R:         18   T01002013303111023221201101011110111212300301123102    38        
--
>347_3467_393_F3	ENSMUST00000113126	-	2591	2626	14	49	50	206	1x5x3x4x8x8x1C5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                              |X||||X||X|||X|||||||X|||||||X |||||
T:               -------------AgACAGaGGtGTGgTGTGGTGtCAGGGTGcCGGGTA-
R:         14   T20102010320301321123203111311110112212001100300132    49        
--
>347_4265_3148_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x8x1x2x11x2x3x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X||||||||||X|X||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAAtCT-----------
R:          9   T00133031111222232011110111232003123022201011003031    39        
--
>348_372_3723_F3	ENSMUST00000113126	-	2595	2622	19	46	50	186	2x11x9A2x3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                   ||X||||||||||X|||||||| ||X||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGATGcTG----
R:         19   T12230201030313312332320111101112011121202311212230    46        
--
>348_640_2448_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111232232011110111232000133011310303322230    36        
--
>348_2064_4242_F3	ENSMUST00000113126	+	762	801	1	40	50	178	3x1x4x2G2x14x1x3T3A4	
G:        762    GGGGAGGTCGACACGGATTTTCCGCCACTGGATTCCAATGAGCCCATTCA    801       
                 |||XX|||X| ||X|||||||||||||XX|| ||| ||||
T:               GGGgaGGTcGGCAcGGATTTTCCGCCActGGTTTCAAATG----------
R:          1   T10030201030313302300020330100101002100313200311210    40        
--
>348_2408_2688_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	3x2x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||X|X||X|||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTC--------------
R:         15   T33302010300301021323203111011110111203033320112210    36        
--
>348_2755_1964_F3	ENSMUST00000113126	-	2600	2625	14	39	50	180	2x3x3x8x10	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                              ||X||X||X|||||||X|||||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGGG-----------
R:         14   T13020103031313231232031110111201112120001002330023    39        
--
>348_3081_1250_F3	ENSMUST00000113126	-	2605	2631	9	35	50	170	2x6x1x2x3x13	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                         ||X|||||XX|X||X||||||||||||
T:               --------GGtGTAGAcaGaGGtGTGGTGTGGTGT---------------
R:          9   T23102011303113223223203111011110111010301030221132    35        
--
>348_3610_3964_F3	ENSMUST00000113126	-	2599	2627	14	42	50	190	2x2x3x11x7x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                              ||X|X||X||||||||||X||||||X|||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAgGGT--------
R:         14   T13030201030313312312320111101112011121300123320222    42        
--
>349_1565_2942_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	5x3x12x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||X|||||||||||X|X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         15   T23302010303101021123203111011110110202003301211201    40        
--
>349_1566_3590_F3	ENSMUST00000113126	-	2602	2624	19	41	50	170	1x3x16x3	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                   |X||X|||||||||||||||X||
T:               ------------------AcAGaGGTGTGGTGTGGTGTcAG---------
R:         19   T12323302010303331033123201111011110111312223020220    41        
--
>349_1850_454_F3	ENSMUST00000113126	-	2596	2627	14	45	50	160	2x2x1x2x11x6x2x1x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X|XX|X||||||||||X|||||X|XX||||
T:               -------------TAgAcaGaGGTGTGGTGTgGTGTCaGggTGCT-----
R:         14   T02330201030310302232320111101112011123223113221331    45        
--
>349_2191_1504_F3	ENSMUST00000113126	-	2603	2626	15	38	50	166	1x2T2x18	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                               |X| ||X|||||||||||||||||
T:               --------------AgATAGaGGTGTGGTGTGGTGTCA------------
R:         15   T02130201030310112332320111101111011121133132220110    38        
--
>349_2574_4757_F3	ENSMUST00000113126	-	2598	2620	21	43	50	170	11x2x4x6	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                     |||||||||||X|X|||X|||||
T:               --------------------AGGTGTGGTGTgGtGTCaGGGTG-------
R:         21   T02330201030310112332320111101112001123200110312312    43        
--
>349_2740_4978_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T32120201230310112312320111101112011121233201332213    39        
--
>349_2919_3861_F3	ENSMUST00000113126	-	1036	1055	30	49	50	180	9x11	
G:       1055    AAGTGTACATTTCTCTTTCTTTCCTTTTAGTCCACAGCGATGTTAGGCTT    1036      
                                              |||||||||X||||||||||
T:               -----------------------------GTCCACAGCgATGTTAGGCT-
R:         30   T31330201230310112332020213101112011123123110320321    49        
--
>350_104_4494_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T010020133000110232232011110111101111022203131210.2    40        
--
>350_358_1593_F3	ENSMUST00000113126	-	730	750	5	25	50	170	4x6x11	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||X|||||X||||||||||
T:               ----CAATaTGCAGgCAGTAGGCAC-------------------------
R:          5   T231201030313122312132031110312101321110131331220.1    25        
--
>350_1375_3484_F3	ENSMUST00000113126	-	2599	2629	20	50	50	206	12x8x2x1T7	
G:       2629    GAAAGAAAGAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGT    2599      
                                    ||||||||||||X|||||||X|X |||||||
T:               -------------------TGTAGACAGAGGtGTGGTGTgGtTTCAGGGT
R:         20   T112303021133020100031132211222031110111202002120.2    50        
--
>350_4299_1090_F3	ENSMUST00000113126	+	2593	2621	11	39	50	162	1x6T1x2T13x4	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                           |X||||| |X| |||||||||||||X|||
T:               ----------CcCAGCATCcTTACACCACACCACAcCTC-----------
R:         11   T231220103003012313232031110111101113022031030022.2    39        
--
>351_345_3052_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	13x3x2x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||X||X|X||||
T:               ----------------------ACACCACACCACAcCTcTgTCTA-----
R:         23   T23102010300301330123203111011110111202320122322121    45        
--
>351_550_2847_F3	ENSMUST00000113126	-	2593	2627	14	48	50	196	2x2T15x2x2x4x2x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                              ||X| |||||||||||||||X|X|X|||X|X||||
T:               -------------TAgATAGAGGTGTGGTGTGGtGtCaGGGtGcTGGG--
R:         14   T02230201130310312332220111101111001223200210210020    48        
--
>351_667_2650_F3	ENSMUST00000113126	+	2604	2626	22	44	50	170	1x17x1x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                      |X||||||||||||||||XX|||
T:               ---------------------GaCACCACACCACACCTCtgTCT------
R:         22   T31303010322001000103203111011110111102232122020001    44        
--
>351_1033_1759_F3	ENSMUST00000113126	-	2600	2629	12	41	50	166	2x2x2T11x2x5x5	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                            ||X|X| |||||||||||X|X||||X||||
T:               -----------TGtAgATAGAGGTGTGGTgTgGTGTcAGGG---------
R:         12   T02330201130310312332220111101310011131200231200130    41        
--
>351_1550_1698_F3	ENSMUST00000113126	-	2594	2622	18	46	50	182	2x5x12C1T7	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                  ||X||||X||||||||||| | |||||||
T:               -----------------AGaGGTGtGGTGTGGTGTCCGTGTGCTGG----
R:         18   T23302010300003320323201131011110111203111132101231    46        
--
>351_1732_1353_F3	ENSMUST00000113126	-	2598	2617	23	42	50	180	15x5	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                       |||||||||||||||X||||
T:               ----------------------TGTGGTGTGGTGTCAgGGTG--------
R:         23   T13102010300300300323203111011110111211001120203301    42        
--
>351_1813_126_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	3x3x12x6	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||X|||||
T:               ----------------CAGaGGtGTGGTGTGGTGtCAGGG----------
R:         17   T20302010300201000123203111011110113212000202112232    40        
--
>351_2138_2953_F3	ENSMUST00000113126	+	2605	2624	23	42	50	180	x20	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                       X|||||||||||||||||||
T:               ----------------------aCACCACACCACACCTCTGT--------
R:         23   T23102010303003002123003111011110111102221130222321    42        
--
>351_2293_2819_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x15x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||||||X|||
T:               ------------------AGaGGTGTGGTGTGGTGtCAG-----------
R:         19   T02330201130310112222320111101111011021232001011111    39        
--
>351_2318_3658_F3	ENSMUST00000113126	-	1691	1721	14	44	50	176	9x7x2x1x2x2T7	
G:       1721    CTGTTACGAATCACAGCAGCCTGTGCCTGCGGGTCTCGGCACTAAAACCC    1691      
                              |||||||||X||||||X|XX|X| |||||||
T:               -------------CAGCAGCCTgTGCCTGcGggTcTTGGCACTA------
R:         14   T32122013303101123123023113021232110201031123000300    44        
--
>351_2352_2155_F3	ENSMUST00000113126	+	2601	2627	19	45	50	162	1x2T13x5T4	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                   |X| |||||||||||||X|||| ||||
T:               ------------------CcTTACACCACACCACAcCTCTTTCTA-----
R:         19   T23302010300301320123203111011110111202220022322322    45        
--
>351_2357_914_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	1x2x18	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |X|X|||||||||||||||||
T:               ----------------CaGaGGTGTGGTGTGGTGTCA-------------
R:         17   T01001013300311330223201111011110111213231112300200    37        
--
>351_2440_984_F3	ENSMUST00000113126	-	2602	2622	18	38	50	170	2x3x16	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||X|||||||||||||||
T:               -----------------AGaGGtGTGGTGTGGTGTCAG------------
R:         18   T21122013320301031223203111011110111212302032221132    38        
--
>351_2501_2586_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x6x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X|||||X|||
T:               -----------------CAGaGGTGTGGTGTgGTGTCaGGG---------
R:         18   T02330201330310112312020111101112011122200312221021    41        
--
>351_2794_2768_F3	ENSMUST00000113126	-	2602	2629	16	43	50	180	2x2x2x3x11x8	
G:       2629    GAAAGAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAA    2602      
                                ||X|X|X||X||||||||||X|||||||
T:               ---------------TGtAgAcAGaGGTGTGGTGTgGTGTCAG-------
R:         16   T11123233220100031031221232011110111201112122222022    43        
--
>351_2976_2092_F3	ENSMUST00000113126	-	2598	2620	23	45	50	170	3x8x8x4	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAA    2598      
                                       |||X|||||||X|||||||X|||
T:               ----------------------AGGtGTGGTGTgGTGTCAGgGTG-----
R:         23   T12323302010300131013123202111011120111212201122020    45        
--
>351_3059_3547_F3	ENSMUST00000113126	-	2600	2624	24	48	50	190	4x3x10x8	
G:       2624    AAAGAAAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGA    2600      
                                        ||||X||X|||||||||X|||||||
T:               -----------------------ACAGaGGtGTGGTGTGGtGTCAGGG--
R:         24   T10031101133020103030113111232031110111102112120031    48        
--
>351_3650_282_F3	ENSMUST00000113126	-	2603	2629	11	37	50	190	4x2x3x3x15	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                           ||||X|X||X||X||||||||||||||
T:               ----------TGTAgAcAGaGGtGTGGTGTGGTGTCA-------------
R:         11   T23102013303113323123203111011110111211203300120301    37        
--
>351_3655_1484_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T21102010300003020123203111011110111211221022221203    37        
--
>352_329_2027_F3	ENSMUST00000113126	-	2597	2620	21	44	50	180	11x6x4x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                     |||||||||||X|||||X|||X||
T:               --------------------AGGTGTGGTGTgGTGTCaGGGtGC------
R:         21   T02330201030310112332320111101112011120200313300323    44        
--
>352_788_2640_F3	ENSMUST00000113126	-	2597	2620	21	44	50	180	11x8x2x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                     |||||||||||X|||||||X|X||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGtGC------
R:         21   T02330201030310112332320111101112011121220213003330    44        
--
>352_914_3331_F3	ENSMUST00000113126	-	2602	2625	17	40	50	160	2x5x1x10x6	
G:       2625    AGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAA    2602      
                                 ||X||||XX|||||||||X|||||
T:               ----------------GAcAGAGgtGTGGTGTGGtGTCAG----------
R:         17   T31233022133013310231222331110111102112123322330022    40        
--
>352_1227_2852_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x2x14x1x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X|||||||||||||XX||||||
T:               -------------TAgAcAGAGGTGTGGTGTggTGTCAG-----------
R:         14   T02330201030310312312220111101112111121213202200230    39        
--
>352_1891_1076_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	15x3x1x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||||X||XX|||
T:               ----------------------ACACCACACCACACCtCTgtCTA-----
R:         23   T23102013301303301323203111011110111101223022322231    45        
--
>352_2193_2365_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	2x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  ||X||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTC--------------
R:         18   T01002013303111023223201111011110111202330323232203    36        
--
>352_3511_4316_F3	ENSMUST00000113126	-	2601	2620	21	40	50	180	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T02130201030310312332320111101112011121201322220332    40        
--
>352_4046_489_F3	ENSMUST00000113126	-	2598	2627	14	43	50	180	2x2x3x15x2x3x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                              ||X|X||X||||||||||||||X|X||X||
T:               -------------TAgAcAGaGGTGTGGTGTGGTGtCaGGgTG-------
R:         14   T02330201030310312312320111101111011020203112233101    43        
--
>353_1142_4591_F3	ENSMUST00000113126	-	2601	2624	19	42	50	160	1x3x3x10x7	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                   |X||X||X|||||||||X||||||
T:               ------------------AcAGaGGtGTGGTGTGGtGTCAGG--------
R:         19   T12123302010303131033123203111011110211212022312210    42        
--
>353_1215_370_F3	ENSMUST00000113126	-	2069	2095	13	39	50	170	5x1x2x9x2x8	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                             |||||XX|X||||||||X|X|||||||
T:               ------------GAGCTccAaCCACAGCTtTtGTAATCT-----------
R:         13   T00133031111212232011110111232203113032230202322111    39        
--
>353_1351_3244_F3	ENSMUST00000113126	-	2602	2620	19	37	50	170	11x8	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                   |||||||||||X|||||||
T:               ------------------AGGTGTGGTGTgGTGTCAG-------------
R:         19   T13020103031310231232011110111201112121330302323231    37        
--
>353_1631_97_F3	ENSMUST00000113126	-	2591	2620	19	48	50	200	3x8x11x3x2x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2591      
                                   |||X|||||||X||||||||||X||X|X||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGTgCTgGgTA--
R:         19   T31020103031310231232031110111201112120013322031300    48        
--
>353_1757_5054_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x8x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||X|||||||
T:               --------CtGAGAGCTccAaCCACAGCtTTTGTAA--------------
R:          9   T00133031111222232011110111230000113000220300331231    36        
--
>353_2056_1353_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x3x15	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||X||||||||||||||
T:               -----------------CAGaGGtGTGGTGTGGTGTCA------------
R:         18   T23302010303203112012320311101111011121323031322102    38        
--
>353_2451_1773_F3	ENSMUST00000113126	-	82	114	12	44	50	176	4x3x2x2x13x3x2C3	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    82        
                            ||||X||X|X|X||||||||||||X||X| |||
T:               -----------CATCaCTgGtCaCGTGTGACTGTCgAAtACGAG------
R:         12   T00102113331313231230223131111212112220031322030320    44        
--
>353_2756_4086_F3	ENSMUST00000113126	+	2601	2627	19	45	50	190	1x3x15x1x7	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                   |X||X||||||||||||||XX||||||
T:               ------------------CcTGaCACCACACCACACCtcTGTCTA-----
R:         19   T23302010301202002123213111011110111101321122323100    45        
--
>353_2878_4447_F3	ENSMUST00000113126	-	2599	2631	9	41	50	176	3T2x2x1x2x3x14x5	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                         ||| ||X|XX|X||X|||||||||||||X||||
T:               --------GGTTTAgAcaGaGGtGTGGTGTGGTGTCaGGGT---------
R:          9   T23102010201003022323203111011110111202001223020331    41        
--
>353_4245_2094_F3	ENSMUST00000113126	-	2600	2627	14	41	50	166	2x2T2x11x7x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X| ||X||||||||||X||||||X||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAgGG---------
R:         14   T02330201030310312332320111101112011121300002331320    41        
--
>354_133_4905_F3	ENSMUST00000113126	-	2597	2622	19	44	50	180	2x11x6x4x3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                   ||X||||||||||X|||||X|||X||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGGGtGC------
R:         19   T02130201030310232202320111101112011120200213120231    44        
--
>354_250_4813_F3	ENSMUST00000113126	-	2596	2626	15	45	50	196	1x2T2x11x10x4	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                               |X| ||X||||||||||X|||||||||X|||
T:               --------------AgATAGaGGTGTGGTGTgGTGTCAGGGtGCT-----
R:         15   T02030201030310012332320111101112011121200313201200    45        
--
>354_308_4737_F3	ENSMUST00000113126	-	2597	2620	21	44	50	180	11x8x1x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                     |||||||||||X|||||||XX|||
T:               --------------------AGGTGTGGTGTgGTGTCAGggTGC------
R:         21   T11130201030310112332320111101112011121221113320023    44        
--
>354_309_2997_F3	ENSMUST00000113126	-	2603	2620	21	38	50	180	18	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     ||||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTCA------------
R:         21   T02030201030310112332020111101111011121003313302221    38        
--
>354_821_2505_F3	ENSMUST00000113126	-	2596	2627	14	45	50	166	2x2T2x11x6x2x2x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X| ||X||||||||||X|||||X|X|X|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCaGgGtGCT-----
R:         14   T02330201030310312332320111101112011120230313202022    45        
--
>354_1183_1850_F3	ENSMUST00000113126	-	79	110	16	47	50	180	3x2x2x1x12x2x7x3	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    79        
                                |||X|X|XX|||||||||||X|X||||||X||
T:               ---------------ACTgGtCacGTGTGACTGTCgAaTATGAGcTA---
R:         16   T20020103031310231230222031111212112123333122223122    47        
--
>354_2639_3504_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121230323012322    39        
--
>354_2812_1538_F3	ENSMUST00000113126	-	2591	2626	14	49	50	200	6x3x14x2x2x1x3x2x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                              ||||||X||X|||||||||||||X|X|XX||X|X||
T:               -------------AGACAGaGGtGTGGTGTGGTGTCaGgGtgCTgGgTA-
R:         14   T32302010303301221123203111011110111202203232203132    49        
--
>354_3787_51_F3	ENSMUST00000113126	-	2591	2627	14	50	50	216	2x2T2x11x10x4x1x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2591      
                              ||X| ||X||||||||||X|||||||||X|||XX|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAGGGtGCTggGTA
R:         14   T02330201030310312332320111101112011121200313222013    50        
--
>355_167_3472_F3	ENSMUST00000113126	+	2602	2624	20	42	50	170	2x13x1x7	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                    ||X||||||||||||XX||||||
T:               -------------------CTgACACCACACCACacCTCTGT--------
R:         20   T23102010301201022123232111011110113002221131320120    42        
--
>355_567_1927_F3	ENSMUST00000113126	+	2600	2627	23	50	50	180	1x6x11x5x1x4	
G:       2600    AGAAAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTA    2627      
                                       |X|||||X||||||||||X||||XX|||
T:               ----------------------CcCTGACaCCACACCACAcCTCTgtCTA
R:         23   T31220001030330201030013202121010111101112022223223    50        
--
>355_1917_3783_F3	ENSMUST00000113126	-	2598	2620	19	41	50	170	3x8x2x10	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                                   |||X|||||||X|X|||||||||
T:               ------------------AGGtGTGGTGTgGtGTCAGGGTG---------
R:         19   T10320103031310231232031110111202112120011022320113    41        
--
>355_3461_4958_F3	ENSMUST00000113126	-	2590	2623	17	50	50	166	x3x3x10x6x1x1x5C4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                                 X||X||X|||||||||X|||||XXX|||| ||||
T:               ----------------cAGaGGtGTGGTGTGGtGTCAGggtGCTGCGTAC
R:         17   T30102010301031122123203111011110211212233132133131    50        
--
>355_3534_713_F3	ENSMUST00000113126	-	2602	2622	18	38	50	170	2x15x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||||||||||||||X|||
T:               -----------------AGaGGTGTGGTGTGGTGtCAG------------
R:         18   T01000213302311323223201111011110112212213100321100    38        
--
>356_867_2729_F3	ENSMUST00000113126	-	2594	2627	14	47	50	206	2x2T2x3x8x10x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                              ||X| ||X||X|||||||X|||||||||X|||||
T:               -------------TAgATAGaGGtGTGGTGTgGTGTCAGGGtGCTGG---
R:         14   T31330201030310312332320211101112011121200313210320    47        
--
>356_2113_823_F3	ENSMUST00000113126	+	2592	2625	10	43	50	206	8T1x2x3x9x7x3	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                          |||||||| |X|X||X||||||||X||||||X||
T:               ---------ACCCAGCATCcTgACaCCACACCAcACCTCTgTC-------
R:         10   T23102013301001231323222101011110101102222121222322    43        
--
>356_3658_1177_F3	ENSMUST00000113126	-	2597	2620	21	44	50	180	11x8x2x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                     |||||||||||X|||||||X|X||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGtGC------
R:         21   T02330201030310112332320111101112011121220313311132    44        
--
>356_3660_3333_F3	ENSMUST00000113126	-	2599	2626	12	39	50	166	1x2x8x8C3x5	
G:       2626    ATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCC    2599      
                            |X|X|||||||X||||||| |||X||||
T:               -----------AgAcAGAGGTGtGGTGTGGCGTCaGGGT-----------
R:         12   T31131030312112312220113101111033123200121323202203    39        
--
>356_3692_2604_F3	ENSMUST00000113126	-	720	753	2	35	50	200	1x2x10x11x1x1x3x5	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                  |X|X|||||||||X||||||||||XXX||X||||
T:               -CaGcAATATGCAGgCAGTAGGCACtgaCAtTGTC---------------
R:          2   T13020103331312231213203111011110112302030221322020    35        
--
>357_107_4307_F3	ENSMUST00000113126	-	2597	2623	18	44	50	176	3x11x5x4C3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                  |||X||||||||||X||||X||| |||
T:               -----------------CAGaGGTGTGGTGTgGTGTcAGGCTGC------
R:         18   T023302010303131123123201111011120111112032133032.1    44        
--
>357_632_1977_F3	ENSMUST00000113126	-	2268	2290	24	46	50	170	3x2x12x6	
G:       2290    AGCCGAAGCTCAATGACAATGTCTGACATGTTGAGAAGGCCTTAGATGAG    2268      
                                        |||X|X|||||||||||X|||||
T:               -----------------------TGAcAtGTTGAGAAGGCcTTAGA----
R:         24   T231020103233030012231031120111101222020332032222.1    46        
--
>357_1300_1142_F3	ENSMUST00000113126	-	2588	2614	17	43	50	170	13x5x1x3x2x3	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTCTCAAAG    2588      
                                 |||||||||||||X||||XX||X|X||
T:               ----------------GGTGTGGTGTCAGgGTGCtgGGtAcCT-------
R:         17   T001330311112022320111101112123011332002300232010.1    43        
--
>357_1746_3846_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	x5x3x14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               X||||X||X|||||||||||||X||
T:               --------------gACAGaGGtGTGGTGTGGTGTCaGG-----------
R:         15   T231020101203010211232031110111101112020333021223.0    39        
--
>357_1804_2864_F3	ENSMUST00000113126	-	2602	2623	25	46	50	160	3x3x10x6	
G:       2623    AAAGAAAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGA    2602      
                                         |||X||X|||||||||X|||||
T:               ------------------------CAGaGGtGTGGTGTGGtGTCAG----
R:         25   T312221032330203000013133012320311101111021121222.0    46        
--
>357_2028_3088_F3	ENSMUST00000113126	-	2593	2614	17	38	50	180	11x5x6	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAG    2593      
                                 |||||||||||X||||X|||||
T:               ----------------GGTGTGGTGTCaGGGTgCTGGG------------
R:         17   T001330311112022320111101112020013321000303003121.2    38        
--
>357_2056_3930_F3	ENSMUST00000113126	-	2602	2622	18	38	50	170	2x11x8	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||||||||||X|||||||
T:               -----------------AGaGGTGTGGTGTgGTGTCAG------------
R:         18   T010020133033112232232011110111201112123203220210.2    38        
--
>357_2059_3440_F3	ENSMUST00000113126	-	2599	2620	21	42	50	180	11x8x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                     |||||||||||X|||||||X||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGT--------
R:         21   T313302010303101123323201111011120111212201223102.2    42        
--
>357_2115_3089_F3	ENSMUST00000113126	+	2594	2620	12	38	50	170	x6x2x2x14x3	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                            X|||||X|X|X|||||||||||||X||
T:               -----------cCAGCAcCcTgACACCACACCACAcCT------------
R:         12   T233020103023012313022021110111101112023201332132.3    38        
--
>357_2495_1381_F3	ENSMUST00000113126	-	2602	2620	19	37	50	170	11x8	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                   |||||||||||X|||||||
T:               ------------------AGGTGTGGTGTgGTGTCAG-------------
R:         19   T130201030313102312320111101112011121223312022213.0    37        
--
>357_2614_2190_F3	ENSMUST00000113126	+	2594	2622	12	40	50	196	3x4x1x2T18	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||X|||XX| ||||||||||||||||||
T:               -----------CCAgCACccTTACACCACACCACACCTCT----------
R:         12   T233020103033010311232031110111101111022233031223.0    40        
--
>357_3511_4510_F3	ENSMUST00000113126	-	2600	2622	19	41	50	170	2x11x6x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||X|||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGGG---------
R:         19   T021302010303102123323201111011120111202003103321.2    41        
--
>357_3780_2089_F3	ENSMUST00000113126	-	2600	2617	23	40	50	160	14x4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                       ||||||||||||||X|||
T:               ----------------------TGTGGTGTGGTGTCaGGG----------
R:         23   T231020133030010001232031110111101112020030023032.0    40        
--
>358_1270_4590_F3	ENSMUST00000113126	+	444	471	9	36	50	160	2x1x6x3x6x2x8	
G:        444    AAGAGAAGCCTCCAAGTTCAGGCAAGCAGTCCATATTGTCTGTACGCCTG    471       
                         ||XX|||||X||X|||||X|X|||||||
T:               --------CCtcCAAGTtCAgGCAAGcAgTCCATAT--------------
R:          9   T10102010103101021221103102211120133330032023032021    36        
--
>358_2049_3338_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121230233011122    39        
--
>358_2205_3540_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T02333031111232232011110111232000133021130331000221    36        
--
>358_2565_2510_F3	ENSMUST00000113126	-	2597	2623	17	43	50	176	3x3x14x3A3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                 |||X||X|||||||||||||X|| |||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGATGC-------
R:         17   T33202010300033033123203111011110111202023133133301    43        
--
>358_2968_846_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T03101013322000301123203111011110111202320203312122    36        
--
>358_3382_4771_F3	ENSMUST00000113126	+	2605	2628	23	46	50	180	16x2x2x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                       ||||||||||||||||X|X|X|||
T:               ----------------------ACACCACACCACACCTcTgTcTAC----
R:         23   T23101012101301000323203111011110111102320132313221    46        
--
>359_172_3803_F3	ENSMUST00000113126	-	2601	2625	14	38	50	170	2x3x3x8x9	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                              ||X||X||X|||||||X||||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGG------------
R:         14   T23302103031313231232031110111201112120210110320112    38        
--
>359_1344_3639_F3	ENSMUST00000113126	-	2598	2620	21	43	50	190	11x8x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                     |||||||||||X|||||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCAGgGTG-------
R:         21   T02330201030310112332320111101112011121210112010220    43        
--
>359_1522_1566_F3	ENSMUST00000113126	+	2595	2621	13	39	50	170	5x3x2x12x1x4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                             |||||X||X|X|||||||||||XX|||
T:               ------------CAGCAcCCtGaCACCACACCACacCTC-----------
R:         13   T02020103031311231200013111011110112302210131321002    39        
--
>359_2114_532_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T23302010300301012322233111011110111102222320200323    40        
--
>359_2251_3600_F3	ENSMUST00000113126	-	2596	2620	20	44	50	170	3x2x12x2x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||X|X|||||||||||X|X|||||
T:               -------------------AGGtGtGGTGTGGTGTCaGgGTGCT------
R:         20   T23302010301001102323203121011110111202301132223213    44        
--
>359_2444_3148_F3	ENSMUST00000113126	-	2605	2623	17	35	50	170	3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                                 |||X|||||||||||||||
T:               ----------------CAGaGGTGTGGTGTGGTGT---------------
R:         17   T23102013300301322123201111011110111332303202313322    35        
--
>359_2992_542_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23302010321001020123203111011110111102223302120110    40        
--
>359_3139_2666_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23102010301301021123203111011110111232203322322132    36        
--
>359_3426_2145_F3	ENSMUST00000113126	-	2598	2623	17	42	50	180	1x5x7x9x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                 |X||||X||||||X||||||||X|||
T:               ----------------CaGAGGtGTGGTGtGGTGTCAGgGTG--------
R:         17   T01002013301011320222203111011210111212201121202320    42        
--
>360_621_4343_F3	ENSMUST00000113126	-	2602	2623	18	39	50	160	x3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  X||X||||||||||X|||||||
T:               -----------------cAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T02130201030310312312320111101112011121220233323000    39        
--
>360_649_2328_F3	ENSMUST00000113126	-	2607	2626	14	33	50	180	9x11	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTACTGTTTGAAAAAAAAT    2607      
                              |||||||||X||||||||||
T:               -------------AGACAGAGGtGTGGTGTGGT-----------------
R:         14   T23102013303300221122202111011110120303320010221213    33        
--
>360_1157_4602_F3	ENSMUST00000113126	+	2604	2626	22	44	50	170	1x11x7x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                      |X||||||||||X||||||X|||
T:               ---------------------GaCACCACACCAcACCTCTgTCT------
R:         22   T02130201030310332312323111011110121102220122122312    44        
--
>360_1164_2319_F3	ENSMUST00000113126	-	2602	2623	18	39	50	160	1x2x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |X|X||||||||||X|||||||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T02030201030310112332320111101112011121220333120220    39        
--
>360_1324_2074_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x2x11x2x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||X|X||||||||||X|X|X||
T:               --------CtGAGAGCTcCaACCACAGCTTtTgTaAT-------------
R:          9   T00133031111222232000010111232010311031120303301122    37        
--
>360_1764_2124_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	3x8x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||X|||||||X|||||||||
T:               --------------------AGGtGTGGTGTgGTGTCAGGG---------
R:         21   T02130201030310112312320311101112011121200332321221    41        
--
>360_1904_3236_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T23102013303301123123203111011110111202221032221002    41        
--
>360_1994_864_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T03101010321031323123203111011110111212323303302222    38        
--
>360_2886_3799_F3	ENSMUST00000113126	-	2596	2627	14	45	50	200	2x2x14x4x1x3x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X|X|||||||||||||X|||XX||X|||||
T:               -------------TAgAcAGAGGTGTGGTGTgGTGtcAGgGTGCT-----
R:         14   T33130201030310312312220111101112011001220113202220    45        
--
>360_2944_3856_F3	ENSMUST00000113126	-	2598	2626	14	42	50	176	2x4x3x13A3x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                              ||X|||X||X|||||||||||| |||X||
T:               -------------AGaCAGaGGtGTGGTGTGGTGTAAGGgTG--------
R:         14   T23100113300300231123203111011110111302031102002100    42        
--
>360_3147_3747_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T23101010321031321123203111011110111330200230111301    35        
--
>360_3465_1675_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T02030201030310312332320111101112011121232202303210    39        
--
>361_303_945_F3	ENSMUST00000113126	-	2596	2622	19	45	50	190	2x11x6x2x6	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                   ||X||||||||||X|||||X|X|||||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGgGTGCT-----
R:         19   T02330201030313312332020111101112011122230113222332    45        
--
>361_2170_594_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	13x5x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       |||||||||||||X||||X||
T:               ----------------------ACACCACACCACAcCTCTgTC-------
R:         23   T23102010303301023123201111011110111302222123033332    43        
--
>361_2572_3461_F3	ENSMUST00000113126	+	2601	2630	19	48	50	166	1x2T12x7x2x2x3	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                   |X| ||||||||||||X||||||X|X|X||
T:               ------------------CcTTACACCACACCACaCCTCTGtCtAcAC--
R:         19   T23332213330300002223203111011110113102221223321111    48        
--
>361_2965_1081_F3	ENSMUST00000113126	-	2601	2620	21	40	50	180	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T02330201030310112332320111101112011121203233231211    40        
--
>361_3464_1660_F3	ENSMUST00000113126	+	2594	2621	12	39	50	166	x7x1x2T13x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            X||||||XX| |||||||||||||X|||
T:               -----------cCAGCACccTTACACCACACCACAcCTC-----------
R:         12   T23102013300301231123203111011110111002233132303311    39        
--
>362_1489_3861_F3	ENSMUST00000113126	+	1935	1962	21	48	50	180	2x4x4x13x2x3	
G:       1935    TTAAAGCAAACAAAGAACAAAAGTGTACATTTCTCTTTCTTTCCTTTTAA    1962      
                                     ||X|||X|||X||||||||||||X|X||
T:               --------------------AAgTGTaCATtTCTCTTTCTTTCcTtTT--
R:         21   T02002010303231023123303111011310222200220023230022    48        
--
>362_3876_1738_F3	ENSMUST00000113126	-	2594	2625	15	46	50	206	2x3x3x14x2A7	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                               ||X||X||X|||||||||||||X| |||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCaGAGTGCTGG----
R:         15   T23302010301301020123203111011110111202221132102002    46        
--
>362_3876_1738_F3	ENSMUST00000113126	+	2604	2624	22	42	50	170	1x13x7	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                      |X||||||||||||X||||||
T:               ---------------------GaCACCACACCACAcCTCTGT--------
R:         22   T23302010301301020123203111011110111202221132102002    42        
--
>363_629_397_F3	ENSMUST00000113126	-	2600	2625	15	40	50	166	1x3T3x12x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |X|| |||X|||||||||||X|||||
T:               --------------GaCATAGGtGTGGTGTGGTGtCAGGG----------
R:         15   T33203020101001331133203111011110112212000333322120    40        
--
>363_1018_2904_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T32302010301201122123203111011110111211333201231222    37        
--
>363_1797_3195_F3	ENSMUST00000113126	-	2595	2626	14	45	50	180	2x1x6x13x3x2x1x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                              ||XX|||||X||||||||||||X||X|XX|||
T:               -------------AGacAGAGGtGTGGTGTGGTGTcAGgGtgCTG-----
R:         14   T23102010301301210122203111011110111012303232130032    45        
--
>363_2353_2779_F3	ENSMUST00000113126	+	2602	2621	20	39	50	180	16x4	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    ||||||||||||||||X|||
T:               -------------------CTGACACCACACCACAcCTC-----------
R:         20   T23302010300302023123212111011110111202203232233032    39        
--
>363_4045_2261_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x8x1x2x12x2x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X|||||||||||X|X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTaAtCT-----------
R:          9   T00133031111222232011110111232000311002231322202232    39        
--
>363_4262_2703_F3	ENSMUST00000113126	+	2604	2624	22	42	50	170	1x8x12	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                      |X|||||||X|||||||||||
T:               ---------------------GaCACCACAcCACACCTCTGT--------
R:         22   T03102010303331023123003111011120111102221103232312    42        
--
>364_3545_848_F3	ENSMUST00000113126	+	2604	2631	22	49	50	180	1x7x9x1x7x3	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                                      |X||||||X||||||||XX||||||X||
T:               ---------------------GaCACCACaCCACACCTctGTCTACaCC-
R:         22   T00111101032320300203203111011210111102031122312102    49        
--
>365_112_1950_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T0233020103031011233232011110111201112123033.30233.    39        
--
>365_558_4145_F3	ENSMUST00000113126	+	2208	2229	25	46	50	170	15x3x4	
G:       2208    AGTTAGGAATTGAGGACCTAGCATGTGCCCAGCGTAAGTGCATGCGTGGG    2229      
                                         |||||||||||||||X||X|||
T:               ------------------------GTGCCCAGCGTAAGTgCAtGCG----
R:         25   T2023020103030330231212000113001233130212311.33221.    46        
--
>365_1063_4660_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x11x6x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||||||||||X|||||X|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCaGGG---------
R:         16   T0233020103031331231232011110111201112320001.10213.    41        
--
>365_1651_2762_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x14x1x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||||XX|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCagGGT---------
R:         17   T2332001230310102312320311101111011123300121.33331.    41        
--
>365_1867_2160_F3	ENSMUST00000113126	-	2600	2625	16	41	50	160	x5x11x4x1x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                X||||X||||||||||X|||XX||||
T:               ---------------gACAGaGGTGTGGTGTgGTGtcAGGG---------
R:         16   T0323020103031310211232011110111201123120002.31202.    41        
--
>365_1878_1006_F3	ENSMUST00000113126	-	2594	2627	16	49	50	176	1x3x3x3x8x2x6A7	
G:       2627    AAGAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGA    2594      
                                |X||X||X||X|||||||X|X||||| |||||||
T:               ---------------TaGAcAGaGGtGTGGTGTgGtGTCAGAGTGCTGG-
R:         16   T1222330201030333222312320311101112021121222.13210.    49        
--
>365_1920_1616_F3	ENSMUST00000113126	+	2592	2627	10	45	50	156	4x1x2x2x1x2T12x4x2x5	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                          ||||XX|X|XX| ||||||||||||X|||X|X||||
T:               ---------ACCCagCaCccTTACACCACACCACaCCTcTgTCTA-----
R:         10   T2032201030100333211320311101111011310232012.33232.    45        
--
>365_1992_4934_F3	ENSMUST00000113126	-	2596	2625	16	45	50	190	2x3x11x6x4x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                ||X||X||||||||||X|||||X|||X|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCaGGGtGCT-----
R:         16   T0233020103031331231232011110111201112020001.00203.    45        
--
>365_2116_1506_F3	ENSMUST00000113126	-	2599	2617	23	41	50	170	16x3	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                       ||||||||||||||||X||
T:               ----------------------TGTGGTGTGGTGTCAGgGT---------
R:         23   T2022103031011231213320311101111011121230122.22033.    41        
--
>365_2177_3979_F3	ENSMUST00000113126	+	2594	2622	12	40	50	190	7x1x2x3x13x3	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||||||XX|X||X||||||||||||X||
T:               -----------CCAGCACccTgACaCCACACCACACCtCT----------
R:         12   T2310201333130123112320213101111011110122032.02033.    40        
--
>365_2402_2816_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x15x2x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||||||||||||||X|X||
T:               ----------------CAGaGGTGTGGTGTGGTGtCaGG-----------
R:         17   T2310201030330100312320111101111011223202312.02333.    39        
--
>365_2597_1546_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	1x3x17	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                |X||X||||||||||||||||
T:               ---------------AcAGaGGTGTGGTGTGGTGTC--------------
R:         16   T2310201030130100312320111101111011120123022.23013.    36        
--
>365_2790_3862_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2310201030000130012320311101111011110222320.22333.    40        
--
>365_2825_1533_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T2310201030030100012320311101111011120233320.31033.    36        
--
>365_2905_141_F3	ENSMUST00000113126	-	2600	2622	18	40	50	170	2x11x6x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                  ||X||||||||||X|||||X|||
T:               -----------------AGaGGTGTGGTGTgGTGTCaGGG----------
R:         18   T0100201332321332322320111101112011123200003.02332.    40        
--
>365_2911_3319_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T0130231031230133132320111101111011120222323.32002.    36        
--
>365_3095_4373_F3	ENSMUST00000113126	-	2596	2623	16	43	50	186	3C2x14x4x4	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                ||| ||X|||||||||||||X|||X|||
T:               ---------------CAGCGGtGTGGTGTGGTGTCaGGGtGCT-------
R:         16   T2332201033321023123302111011110111202000132.13202.    43        
--
>365_3322_3134_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	2x5x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X||||X||X|||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T2330201030130302112320311101111011123132223.22013.    36        
--
>365_3496_2900_F3	ENSMUST00000113126	+	2029	2067	2	40	50	182	1x3A1x2x4x7G3x7x2x7	
G:       2029    TATATTATCTTCCTTAAAATCTGTTCCCATATTGAACAGGCAGATTACAA    2067      
                  |X|| |X|X|||X|||||| |||X||||||X|X||||||
T:               -AtATAAtCtTCCtTAAAATGTGTtCCCATAtTgAACAGG----------
R:          2   T2123330123020003000311111200133003201120203.33332.    40        
--
>365_3767_2873_F3	ENSMUST00000113126	-	2599	2622	18	41	50	180	2x3x14x5	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                  ||X||X|||||||||||||X||||
T:               -----------------AGaGGtGTGGTGTGGTGTCaGGGT---------
R:         18   T2310201330000102032320311101111011120200123.33323.    41        
--
>366_1242_1990_F3	ENSMUST00000113126	-	2068	2099	9	40	50	166	1x3x5x1x2x7x9C3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X||||||X|||||||| |||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAACCTG----------
R:          9   T00133031111232232011110111202000113010210111331230    40        
--
>366_1450_1483_F3	ENSMUST00000113126	-	2595	2620	19	44	50	180	3x8x9x2x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                                   |||X|||||||X||||||||X|X|||
T:               ------------------AGGtGTGGTGTgGTGTCAGGgTgCTG------
R:         19   T23302103031310231232031110111201112120313321220021    44        
--
>366_1996_4954_F3	ENSMUST00000113126	-	2598	2626	11	39	50	176	1x2T5x10x2x8	
G:       2626    TTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATCCC    2598      
                           |X| |||||X|||||||||X|X|||||||
T:               ----------AgATAGAGGtGTGGTGTGGtGtCAGGGTG-----------
R:         11   T22010302131123322203111011110210212001123222310101    39        
--
>366_2155_4215_F3	ENSMUST00000113126	-	80	116	10	46	50	190	2x4x3x2x2x13x2x3x1x5	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    80        
                          ||X|||X||X|X|X||||||||||||X|X||XX||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCgAaTAtgAGCT----
R:         10   T13020103031313231230222131111212112121330322322120    46        
--
>366_2203_4416_F3	ENSMUST00000113126	-	2058	2099	9	50	50	166	1x3x5x1x2x11x2x3x4x1x1A3x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2058      
                         |X||X||||XX|X||||||||||X|X||X|||XX |||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAAtCTGccAGTTcAAT
R:          9   T00133031111232232031110111232003133002210212101103    50        
--
>366_2932_2601_F3	ENSMUST00000113126	-	2590	2620	20	50	50	190	3x3x15x1x2x2x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                                    |||X||X||||||||||||||XX|X|X||||
T:               -------------------AGGtGTgGTGTGGTGTCAGGGtgCtGgGTAC
R:         20   T23302010323001023123203113011110111212003033130131    50        
--
>366_3667_2789_F3	ENSMUST00000113126	+	2604	2621	22	39	50	180	18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                      ||||||||||||||||||
T:               ---------------------GACACCACACCACACCTC-----------
R:         22   T23323220200200213123202111011110111102212010232220    39        
--
>367_570_3795_F3	ENSMUST00000113126	-	2598	2615	16	33	50	160	1x17	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGAAAAAAATCCCTCAAAG    2598      
                                |X||||||||||||||||
T:               ---------------TgGTGTGGTGTCAGGGTG-----------------
R:         16   T00133031111232232011110111212001103331221233230222    33        
--
>367_1812_2632_F3	ENSMUST00000113126	-	2600	2630	10	40	50	176	2x2G2x1x2x15x6	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                          ||X| ||XX|X||||||||||||||X|||||
T:               ---------GTgTGGAcaGaGGTGTGGTGTGGTGtCAGGG----------
R:         10   T01002013221211023223201111011110113212000303121203    40        
--
>367_1927_4125_F3	ENSMUST00000113126	-	2599	2617	23	41	50	170	12x7	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                       ||||||||||||X||||||
T:               ----------------------TGTGGTGTGGTGtCAGGGT---------
R:         23   T21102010301331021123023111011110113212001312331020    41        
--
>367_3259_5001_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111222232011110111232000213012110113202103    36        
--
>367_3679_4735_F3	ENSMUST00000113126	-	2593	2631	9	47	50	216	2x2x2x5x3x14x4C1x5	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                         ||X|X|X||||X||X|||||||||||||X||| |X||||
T:               --------GGtGtAgACAGaGGtGTGGTGTGGTGTCaGGGCGcTGGG---
R:          9   T23302010003103321123203111011110111202003302100222    47        
--
>367_3714_3058_F3	ENSMUST00000113126	+	2382	2399	1	18	50	160	13x5	
G:       2382    CCTCATAGCAAGTATGATATGGTCAGCCTGCCTCTCTGACCTATCTCCAA    2399      
                 |||||||||||||X||||
T:               CCTCATAGCAAGTaTGAT--------------------------------
R:          1   T20221332310212312300310131112313302001231022123322    18        
--
>368_2354_2938_F3	ENSMUST00000113126	-	2072	2098	10	36	50	190	3x5x1x2x16	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X|||||||||||||||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:         10   T001333311112022320311101112320001130012202233201.2    36        
--
>368_2845_132_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	4x4x1x2x13x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          ||||X|||XX|X||||||||||||X||
T:               ---------TGAGaGCTccAaCCACAGCTTTTGtAA--------------
R:         10   T111330312112212320311101112320001330111212121131.2    36        
--
>369_195_2216_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	6x8x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  ||||||X|||||||X|||||||
T:               -----------------CAGAGGtGTGGTGTgGTGTCAG-----------
R:         18   T33130201030313112312220311101112011121220023223323    39        
--
>369_640_1931_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	4x3x13x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                ||||X||X||||||||||||X||
T:               ---------------ACAGaGGtGTGGTGTGGTGTcAG------------
R:         16   T23102013320203031123203111011110111112102032033122    38        
--
>369_1756_4316_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111232232031110111232300113010100332332202    36        
--
>369_1834_1635_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T00133031111232232031110111232000103030310023331122    37        
--
>369_1836_2020_F3	ENSMUST00000113126	-	2595	2623	17	45	50	170	1x2x3x11x2x3x7	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                 |X|X||X||||||||||X|X||X||||||
T:               ----------------CaGaGGtGTGGTGTGGTgTcAGgGTGCTG-----
R:         17   T20003223003210330323203111011110121312301132122033    45        
--
>369_2528_27_F3	ENSMUST00000113126	+	2595	2621	13	39	50	190	5x3x2x12x5	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                             |||||X||X|X|||||||||||X||||
T:               ------------CAGCAcCCtGaCACCACACCACaCCTC-----------
R:         13   T21120103031311231200313111011110113102233230312330    39        
--
>369_2804_1550_F3	ENSMUST00000113126	+	2733	2758	23	48	50	180	3x2x10x2x9	
G:       2733    CCTGTGTTTAGGACATTTTTTAAATCATTGTGTCTAAGCATCTCAGAGTC    2758      
                                       |||X|X|||||||||X|X||||||||
T:               ----------------------AATcAtTGTGTCTAAgCaTCTCAGAG--
R:         23   T22233022133033311231232031110111122300333222122222    48        
--
>369_3600_2225_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T23122010300302002113203111011110111102233132021222    39        
--
>370_1059_4220_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	2x3x3x13x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X||||||||||||X||
T:               --------------GAcAGaGGtGTGGTGTGGTGTcAG------------
R:         15   T23102010321001322123203111011110111012323230133321    38        
--
>370_1213_3131_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	1x4x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |X|||X||X|||||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T23102210300303331123203111011110111212222330332321    38        
--
>370_1232_1355_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x12x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||||X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCAG------------
R:         15   T10302010323031021123203111011110112212311020133113    38        
--
>370_1465_4895_F3	ENSMUST00000113126	-	2601	2625	15	39	50	190	2x3x3x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               ||X||X||X||||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAGG-----------
R:         15   T32302010301001320123203111011110111212033233313202    39        
--
>370_1615_4015_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	14x2x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  ||||||||||||||X|X||||
T:               -----------------CAGAGGTGTGGTGTgGtGTCA------------
R:         18   T02330201030313112312220111101112031121322121211233    38        
--
>370_2204_4361_F3	ENSMUST00000113126	-	1423	1463	6	46	50	182	4x1T5x3x1x5x11x2C2x2x3	
G:       1463    CAAAGTGCGTCGGACTCGAAGTACAGGTGCTTGTAGTCATGGCTGCAGAA    1423      
                      ||||X |||||X||XX||||X||||||||||X| ||X|X||
T:               -----TGCGtTGGACTcGAagTACAgGTGCTTGTAGtCCTGgCtGC----
R:          6   T23122013300102123323313111011320113222021331133302    46        
--
>370_2269_4433_F3	ENSMUST00000113126	-	2596	2624	16	44	50	170	2x2x3x14x2x3x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                ||X|X||X|||||||||||||X|X||X||
T:               ---------------ACaGaGGtGTGGTGTGGTGTCaGgGTgCT------
R:         16   T23312010301103301323203111011110111202201232233233    44        
--
>370_2296_1443_F3	ENSMUST00000113126	+	2604	2621	22	39	50	160	1x17	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                      |X||||||||||||||||
T:               ---------------------GaCACCACACCACACCTC-----------
R:         22   T23132010300301332123203111011110111102232331113333    39        
--
>370_2499_3387_F3	ENSMUST00000113126	-	2602	2625	15	38	50	200	5x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T23312010321101121123203111011110111212232231031022    38        
--
>370_2555_2929_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	13x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||||X||||
T:               ----------------------ACACCACACCACAcCTCT----------
R:         23   T23102010301300331313203111011110111302222232333333    40        
--
>370_2567_1644_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	1x2x15x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |X|X||||||||||||||X|||
T:               ----------------CaGaGGTGTGGTGTGGTGtCAG------------
R:         17   T01002013301013333223201111011110113212220133030021    38        
--
>370_2704_2864_F3	ENSMUST00000113126	-	2600	2620	17	37	50	170	3x9x9	
G:       2620    TTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCC    2600      
                                 |||X||||||||X||||||||
T:               ----------------AGGtGTGGTGTGgTGTCAGGG-------------
R:         17   T22010300331123123203111011113111212003301311322321    37        
--
>370_2780_2318_F3	ENSMUST00000113126	+	2598	2621	16	39	50	166	3x1x2T17	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                |||XX| |||||||||||||||||
T:               ---------------CACccTTACACCACACCACACCTC-----------
R:         16   T23322010301003001113203111011110111102233223223332    39        
--
>370_2935_3529_F3	ENSMUST00000113126	-	2596	2629	11	44	50	186	1x2x4x2x15C3x1x5	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                           |X|X|||X|X|||||||||||||| |||XX||||
T:               ----------TgTaGACaGaGGTGTGGTGTGGTGCCAGggTGCT------
R:         11   T01013013302211221223201111011110113012211132322213    44        
--
>370_2936_962_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x12x4	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X|||||||||||X|||
T:               ------------GAGCTccAaCCACAGCTTTTgTAA--------------
R:         13   T00133031111212232031110111232000313013330213312213    36        
--
>370_3183_567_F3	ENSMUST00000113126	-	2601	2625	12	36	50	170	2x6x10x2x5	
G:       2625    TTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATCCC    2601      
                            ||X|||||X|||||||||X|X||||
T:               -----------GAcAGAGGtGTGGTGTGGtGtCAGG--------------
R:         12   T22010303131323122203111011110213212010211333312122    36        
--
>370_3537_1996_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x12x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||||X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCAG------------
R:         15   T33302010301303321123203111011110113212223200221223    38        
--
>370_3549_2176_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	16x2x1x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       ||||||||||||||||X|XX|||
T:               ----------------------ACACCACACCACACCTcTgtCTA-----
R:         23   T23300210301301300123203111011110111102122322323122    45        
--
>370_3693_1816_F3	ENSMUST00000113126	-	2598	2620	20	42	50	170	x3x14x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                    X||X|||||||||||||X|||||
T:               -------------------aGGtGTGGTGTGGTGTCaGGGTG--------
R:         20   T23301010313303312113203111011110111202001112323311    42        
--
>370_3708_2655_F3	ENSMUST00000113126	-	2597	2625	14	42	50	170	2x3x3x8x2x6x5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                              ||X||X||X|||||||X|X|||||X||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGgGTGC--------
R:         14   T13020103031313231232031110111202112123011333303123    42        
--
>371_153_2541_F3	ENSMUST00000113126	-	2597	2631	10	44	50	162	2x2C1x2x3x3x8x8C4	
G:       2631    GAAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                          ||X| |X|X||X||X|||||||X||||||| ||||
T:               ---------GGtGCAgAcAGaGGtGTGGTGTgGTGTCAGCGTGC------
R:         10   T12130201030313112312320311101112011121233113332211    44        
--
>371_300_2232_F3	ENSMUST00000113126	-	2595	2625	16	46	50	170	2x3x3x8x8x2x1x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                ||X||X||X|||||||X|||||||X|XX|||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGtgCTG----
R:         16   T02330201030313312312320311101112011121230233213120    46        
--
>371_466_3405_F3	ENSMUST00000113126	-	2597	2620	20	43	50	180	14x2x3x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    ||||||||||||||X|X||X||||
T:               -------------------AGGTGTGGTGTGGTgTcAGgGTGC-------
R:         20   T01002013300011121223201111011110121012201133123132    43        
--
>371_510_1421_F3	ENSMUST00000113126	-	2591	2625	15	49	50	162	5x3x12x2x2x1C1x4C3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                               |||||X||X|||||||||||X|X|X |X||| |||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGgCTgCTGCGTA-
R:         15   T23302010303033021123203111011110112222232332133133    49        
--
>371_672_3682_F3	ENSMUST00000113126	-	2606	2625	15	34	50	180	5x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||||||||||||||
T:               --------------GACAGaGGTGTGGTGTGGTG----------------
R:         15   T23302010100303121123201111011110110101221331321333    34        
--
>371_700_2891_F3	ENSMUST00000113126	+	2604	2626	22	44	50	190	8x11x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                      ||||||||X||||||||||X|||
T:               ---------------------GACACCACaCCACACCTCTgTCT------
R:         22   T23302010300103310323232111011310111102222122203331    44        
--
>371_709_4663_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x12x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||||X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCAG------------
R:         15   T32302010303003321123203111011110113212303003032132    38        
--
>371_1456_1105_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T13302210300303332113203111011110111202221333222022    41        
--
>371_1677_3302_F3	ENSMUST00000113126	-	2596	2625	16	45	50	180	2x3x3x8x8x2x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                ||X||X||X|||||||X|||||||X|X|||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGtGCT-----
R:         16   T02330201030313312312320311101112011121220313222222    45        
--
>371_2106_1688_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	x5x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               X||||X||X|||||||||||||X|||
T:               --------------gACAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23302010002301121123203111011110111222003331333231    40        
--
>371_2149_1180_F3	ENSMUST00000113126	-	2603	2628	12	37	50	166	3x1x1G2x18	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                            |||XX ||X|||||||||||||||||
T:               -----------GTAgaGAGaGGTGTGGTGTGGTGTCA-------------
R:         12   T01002013303013312223201111011110111211323322132233    37        
--
>371_2278_759_F3	ENSMUST00000113126	-	2599	2621	19	41	50	170	1x3x16x3	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                   |X||X|||||||||||||||X||
T:               ------------------GaGGtGTGGTGTGGTGTCAGgGT---------
R:         19   T23102010302103001113203111011110111212201020121232    41        
--
>371_2898_1243_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302032303131123123203111011110111212223333112332    38        
--
>371_3043_1827_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	x3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 X||X||X|||||||||||||||
T:               ----------------cAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T21102010303232020123203111011110111212213121112103    38        
--
>371_3706_2227_F3	ENSMUST00000113126	+	2605	2624	23	42	50	180	13x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                       |||||||||||||X||||||
T:               ----------------------ACACCACACCACAcCTCTGT--------
R:         23   T20201030313101312133203111011110111202221113323212    42        
--
>371_3713_878_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	6x3x9x2x5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              ||||||X||X||||||||X|X||||
T:               -------------AGACAGaGGtGTGGTGTGgTgTCAG------------
R:         14   T23302032303121221123203111011112131212203112333332    38        
--
>371_3722_977_F3	ENSMUST00000113126	-	719	754	1	36	50	226	1x3x10x12T2x4x3	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                 |X||X|||||||||X||||||||||| ||X|||X||
T:               TcAGcAATATGCAGgCAGTAGGCACTTACaTTGtCA--------------
R:          1   T03120103331312231213203112031230132112323233223222    36        
--
>371_3825_4330_F3	ENSMUST00000113126	-	2599	2617	23	41	50	170	14x5	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                       ||||||||||||||X||||
T:               ----------------------TGTGGTGTGGTGTCaGGGT---------
R:         23   T23302010302001010123202111011110111202001312221212    41        
--
>371_3883_4432_F3	ENSMUST00000113126	-	2596	2620	20	44	50	170	3x11x5x1x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||X||||||||||X||||XX||||
T:               -------------------AGGtGTGGTGTGGTgTCAGggTGCT------
R:         20   T23102023320101030323203111011110121212311132222312    44        
--
>371_3950_1557_F3	ENSMUST00000113126	-	1212	1237	15	40	50	160	x15x3x2x2x4	
G:       1237    TTGGCAATGGTTCTGTGAATCGCAGTCTGTGGATCATGCTACCTCCTGGA    1212      
                               X||||||||||||||X||X|X|X|||
T:               --------------gTGAATCGCAGTCTGtGGaTcAtGCT----------
R:         15   T22113031311233211203233121221010133121322333222001    40        
--
>372_128_4513_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x3x8x10	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||X|||||||X|||||||||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGGG---------
R:         16   T02330201030313312312320311101112011121200333122110    41        
--
>372_1079_2794_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23322010322301011123203111011110111202231033223233    36        
--
>372_1211_2310_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x11x2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||||||X|X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAAT-------------
R:          9   T00133031111222232031110111232003103030330223331121    37        
--
>372_1478_1813_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x14x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||X|||
T:               -------------------AGGtGTGGTGTGGTGTCaGGG----------
R:         20   T12132033020003030013203111011110111202002203011210    40        
--
>372_2447_1511_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111222232031110111212000113000030022212111    36        
--
>372_2503_1018_F3	ENSMUST00000113126	-	2603	2624	16	37	50	180	4x3x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                ||||X||X||||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCA-------------
R:         16   T23302010323201031123203111011110111213330303020322    37        
--
>372_2950_3749_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T02330201030313312312320111101112011121230033222232    39        
--
>373_233_1741_F3	ENSMUST00000113126	-	719	754	1	36	50	180	x4x4x6x11x2x2x2x2x3	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                 X|||X|||X|||||X||||||||||X|X|X|X|X||
T:               tCAGcAATaTGCAGgCAGTAGGCACtGaCaTtGtCA--------------
R:          1   T12120103031312231213203113111232132102300222023332    36        
--
>373_429_4642_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T01002013300211123223203111011110111212330332110222    38        
--
>373_729_2230_F3	ENSMUST00000113126	+	2593	2624	11	42	50	166	x4x4x1x2T13x3x4	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                           X|||X|||XX| |||||||||||||X||X|||
T:               ----------cCCAgCACccTTACACCACACCACAcCTcTGT--------
R:         11   T23302010303001331123203111011110111202321133202202    42        
--
>373_729_2230_F3	ENSMUST00000113126	-	2597	2624	16	43	50	160	x4x3x14x2x1x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                X|||X||X|||||||||||||X|XX|||
T:               ---------------aCAGaGGtGTGGTGTGGTGTCaGggTGC-------
R:         16   T23302010303001331123203111011110111202321133202202    43        
--
>373_1434_1306_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T23302010301031000223203111011110111102232220233202    39        
--
>373_1535_1334_F3	ENSMUST00000113126	-	2065	2099	9	43	50	170	1x3x5x1x2x9x7x1x3x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                         |X||X||||XX|X||||||||X||||||XX||X||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAAtcTGcCT-------
R:          9   T00133031111232232031110111232300113000211022300322    43        
--
>373_1656_2894_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T02330201030313312312320111101112011121220033302223    39        
--
>373_2047_4627_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x1x18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||XX|||||||||||||||||
T:               -------------------CTgaCACCACACCACACCTCT----------
R:         20   T23302010302301301323233111011110111102223333012323    40        
--
>373_2445_3088_F3	ENSMUST00000113126	-	2602	2620	25	43	50	170	x19	
G:       2620    GAAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAA    2602      
                                         X||||||||||||||||||
T:               ------------------------aGGTGTGGTGTGGTGTCAG-------
R:         25   T32303002010300201230323112011110111101112123232021    43        
--
>373_2563_4422_F3	ENSMUST00000113126	-	730	750	5	25	50	170	4x6x11	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||X|||||X||||||||||
T:               ----CAATaTGCAGgCAGTAGGCAC-------------------------
R:          5   T02022103031312231213203111201220113102310333300113    25        
--
>373_2915_2801_F3	ENSMUST00000113126	+	2594	2621	12	39	50	186	7x1x2T3x14	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            |||||||XX| |||X|||||||||||||
T:               -----------CCAGCACccTTACAcCACACCACACCTC-----------
R:         12   T13200113031301231123203113011110111102233033223302    39        
--
>373_3060_4419_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	7x12x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       |||||||X|||||||||||X||
T:               ----------------------ACACCACaCCACACCTCTGtCT------
R:         23   T00133031211200330013233111011210111102221322202231    44        
--
>373_3138_4094_F3	ENSMUST00000113126	+	2604	2625	22	43	50	180	1x17x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                      |X||||||||||||||||X|||
T:               ---------------------GaCACCACACCACACCTCtGTC-------
R:         22   T03302010321003302323203111011110111102211123233023    43        
--
>373_3222_3833_F3	ENSMUST00000113126	-	2058	2099	9	50	50	186	1x3x5x1x2x13x1x2x1G2x2x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2058      
                         |X||X||||XX|X||||||||||||XX|X ||X|X|||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtaAtGTGcCtGTTCAAT
R:          9   T00133031111232232031110111232000101001111001102103    50        
--
>373_3608_2603_F3	ENSMUST00000113126	-	83	115	11	43	50	190	2x3x3x2x2x13x2x6	
G:        115    CTCTGTATTTTCATCACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    83        
                           ||X||X||X|X|X||||||||||||X|X|||||
T:               ----------TCaTCaCTgGtCaCGTGTGACTGTCgAaTATGA-------
R:         11   T01002010323223231230222131111212112122333123202222    43        
--
>373_4059_2976_F3	ENSMUST00000113126	-	720	753	2	35	50	180	3x4x6x10x1x2x2x2x4	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                  |||X|||X|||||X|||||||||XX|X|X|X|||
T:               -CAGcAATaTGCAGgCAGTAGGCActGaCaTtGTC---------------
R:          2   T13122103031312231213203133111232112312230223231321    35        
--
>374_741_3137_F3	ENSMUST00000113126	-	2597	2612	25	40	50	160	16	
G:       2612    TTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                                         ||||||||||||||||
T:               ------------------------TGTGGTGTCAGGGTGC----------
R:         25   T00233022103033313230232031110111212001133331322322    40        
--
>375_178_1904_F3	ENSMUST00000113126	-	2604	2628	12	36	50	170	1x2x5x3x14	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                            |X|X||||X||X|||||||||||||
T:               -----------GtAgACAGaGGtGTGGTGTGGTGTC--------------
R:         12   T2310201000020312112320311101111011120233132301002.    36        
--
>375_425_933_F3	ENSMUST00000113126	-	2602	2626	13	37	50	170	x6x3x4x12	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                             X|||||X||X|||X|||||||||||
T:               ------------aGACAGaGGtGTGgTGTGGTGTCAG-------------
R:         13   T3102010303131221123200111211110111212223312132030.    37        
--
>375_456_3347_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	4x3x12x2x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                ||||X||X|||||||||||X|X|||
T:               ---------------ACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         16   T2330201000330130112320311101111011220200022333122.    40        
--
>375_778_2589_F3	ENSMUST00000113126	-	2070	2099	9	38	50	200	1x8x1x2x11x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X|||||||XX|X||||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGTAATC------------
R:          9   T0013303111122223203111011123200311303232030323021.    38        
--
>375_883_1358_F3	ENSMUST00000113126	-	2071	2100	8	37	50	180	2x3x5x1x2x12x5	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                        ||X||X||||XX|X|||||||||||X||||
T:               -------TCtGAgAGCTccAaCCACAGCTTTTgTAAT-------------
R:          8   T0001303121121223203111011123200001303123010000000.    37        
--
>375_1632_2845_F3	ENSMUST00000113126	-	2602	2629	11	38	50	180	x6x3x3x10x6	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           X|||||X||X||X|||||||||X|||||
T:               ----------tGTAGAcAGaGGtGTGGTGTGGtGTCAG------------
R:         11   T2330201030311322312320311101111001121220032122022.    38        
--
>375_1632_3578_F3	ENSMUST00000113126	+	2593	2626	11	44	50	186	4x2x2x1x2T13x3x6	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                           ||||X|X|XX| |||||||||||||X||X|||||
T:               ----------CCCAgCaCccTTACACCACACCACAcCTcTGTCT------
R:         11   T2330201030000103012320311101111011100202112202021.    44        
--
>375_1660_1223_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201020333101112320311101111011120232333220323.    36        
--
>375_1863_2018_F3	ENSMUST00000113126	-	2073	2099	9	35	50	190	1x8x1x2x15	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                         |X|||||||XX|X||||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTA---------------
R:          9   T0013303111122223203111011123200011331130101003332.    35        
--
>375_1965_1387_F3	ENSMUST00000113126	+	2589	2626	7	44	50	212	2x1x5T3x1x2T18x4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                       ||XX|||| |||XX| ||||||||||||||||||X|||
T:               ------GGtaCCCATCACccTTACACCACACCACACCTCTgTCT------
R:          7   T2330201030100132112320311101111011110222212200231.    44        
--
>375_2043_4646_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T0013303111122223203111011123200031301001000230313.    36        
--
>375_2055_1513_F3	ENSMUST00000113126	+	2142	2167	1	26	50	166	2x1A10x6x6	
G:       2142    TGTTTAAATAAGTGATTTGCTTTGAGAATAGCATCTTACTAAAGTTAGGA    2167      
                 ||X ||||||||||X|||||X|||||
T:               TGtATAAATAAGTGaTTTGCtTTGAG------------------------
R:          1   T0103330033021103001310012202231100111122303332222.    26        
--
>375_2074_3248_F3	ENSMUST00000113126	-	2602	2626	14	38	50	176	2x1x3C18	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              ||XX|| ||||||||||||||||||
T:               -------------AGacAGCGGTGTGGTGTGGTGTCAG------------
R:         14   T2310201030310121312330111101111011121213302323322.    38        
--
>375_2309_2585_F3	ENSMUST00000113126	+	2589	2620	7	38	50	186	2x3x7G2x1x12x4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                       ||X||X|||||| ||XX|||||||||||X|||
T:               ------GGtACcCAGCACGCTgaCACCACACCACaCCT------------
R:          7   T2330201033130123113322311101111011210233030022032.    38        
--
>375_3314_1260_F3	ENSMUST00000113126	-	719	750	5	36	50	206	4x6x10x1G1x9	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     ||||X|||||X|||||||||X |X||||||||
T:               ----CAATaTGCAGgCAGTAGGCAcGGaCATTGTCA--------------
R:          5   T1102010303131223121320313301113011210023120122122.    36        
--
>375_3606_4353_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T0013303111122223203111011123200021301123020121212.    36        
--
>375_3837_1959_F3	ENSMUST00000113126	-	2602	2629	11	38	50	180	2x2x2x3x3x16	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||X|X|X||X||X|||||||||||||||
T:               ----------TGtAgAcAGaGGtGTGGTGTGGTGTCAG------------
R:         11   T3330221010313332312320311101111011121232333303220.    38        
--
>375_3865_3670_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T0100201330331032222320111101111011122332032231133.    36        
--
>375_4139_2393_F3	ENSMUST00000113126	-	2037	2054	2	19	50	160	2x16	
G:       2054    TGGAACAGATTTTAAGGAAAAAAGGATCCCAGAAAATTTCAGGCCCTCAG    2037      
                  ||X|||||||||||||||
T:               -GGaACAGATTTTAAGGAA-------------------------------
R:          2   T2303011223000302020331112331123233111011123222313.    19        
--
>376_2364_4932_F3	ENSMUST00000113126	+	2604	2628	22	46	50	170	1x13x3x2x6	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                      |X||||||||||||X||X|X|||||
T:               ---------------------GaCACCACACCACAcCTcTgTCTAC----
R:         22   T23103010320300330323303111011110111202122122312012    46        
--
>376_2897_812_F3	ENSMUST00000113126	-	2600	2620	25	45	50	170	5x12x4	
G:       2620    GAAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAA    2600      
                                         |||||X|||||||||||X|||
T:               ------------------------AGGTGtGGTGTGGTGTCaGGG-----
R:         25   T31011323230310201030303112011310111101112020032323    45        
--
>376_3531_1552_F3	ENSMUST00000113126	-	719	753	2	36	50	210	1x2x3x7x11x2x2x7	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X||X||||||X||||||||||X|X|X||||||
T:               -CaGcAAtATGCAGgCAGTAGGCACtGaCaTTGTCA--------------
R:          2   T13020100331312231213203111111230112102311030213331    36        
--
>376_4126_1350_F3	ENSMUST00000113126	+	2591	2628	9	46	50	180	3x2x4x1x1x2x1x13x2x4x5	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                         |||X|X|||XXX|XX||||||||||||X|X|||X||||
T:               --------TACcCaGCAcccTgaCACCACACCACAcCtCTGtCTAC----
R:          9   T23122110031303231223223111011110111200221222313221    46        
--
>377_1667_75_F3	ENSMUST00000113126	-	2601	2621	19	39	50	170	x4x17	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                   X|||X||||||||||||||||
T:               ------------------gAGGtGTGGTGTGGTGTCAGG-----------
R:         19   T202200300203030323122021110111101112120330300032.1    39        
--
>377_2133_2574_F3	ENSMUST00000113126	-	2600	2629	11	40	50	180	4x2x3x3x10x2x6	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                           ||||X|X||X||X|||||||||X|X|||||
T:               ----------TGTAgAcAGaGGtGTGGTGTGGtGtCAGGG----------
R:         11   T233020102031133231232031110111102102120032323303.1    40        
--
>377_3947_1999_F3	ENSMUST00000113126	-	2601	2626	15	40	50	160	1x2x3x3x12x5	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                               |X|X||X||X|||||||||||X||||
T:               --------------AgAcAGaGGtGTGGTGTGGTGtCAGG----------
R:         15   T023302010303031123120203111011110112212030333222.2    40        
--
>378_793_2585_F3	ENSMUST00000113126	-	2600	2626	14	40	50	190	1x8x11x3x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              |X|||||||X||||||||||X||X|||
T:               -------------AgACAGAGGtGTGGTGTGGTgTCaGGG----------
R:         14   T23302010300001021122203111011110131202002333323032    40        
--
>378_1089_3246_F3	ENSMUST00000113126	+	2602	2624	20	42	50	170	2x14x4x3	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                    ||X|||||||||||||X|||X||
T:               -------------------CTgACACCACACCACAcCTCtGT--------
R:         20   T23102010300303331113202111011110111002201103100322    42        
--
>378_1143_4195_F3	ENSMUST00000113126	-	2592	2626	14	48	50	176	1x5x2C12x2x2x2x3x5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2592      
                              |X||||X| ||||||||||||X|X|X|X||X||||
T:               -------------AgACAGaGCTGTGGTGTGGTGtCaGgGtGCtGGGT--
R:         14   T23302010300001021123232111011110113202203130100122    48        
--
>378_1211_3766_F3	ENSMUST00000113126	+	2604	2626	22	44	50	176	13T6x3	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                      ||||||||||||| ||||||X||
T:               ---------------------GACACCACACCACTCCTCTGtCT------
R:         22   T13230201030323302313222111011110112202221222221222    44        
--
>378_2644_4619_F3	ENSMUST00000113126	+	2200	2223	12	35	50	160	2x5x7x2x8	
G:       2200    GGAATTGAGGACCTAGCATGTGCCCAGCGTAAGTGCATGCGTGGGTGCGT    2223      
                            ||X||||X||||||X|X|||||||
T:               -----------CCtAGCAtGTGCCCaGcGTAAGTG---------------
R:         12   T20122010303001323121113002213130211220203212221102    35        
--
>378_2875_3464_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302010302301000123203111011110111212300323220031    38        
--
>378_3953_2646_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000112112020222211231    34        
--
>378_3957_595_F3	ENSMUST00000113126	+	944	967	23	46	50	180	5x12x4x3	
G:        944    TCCAAGTAGACAACACAAAGGTCACCATGAAGGAGATCTTGCTCAAGGCA    967       
                                       |||||X|||||||||||X|||X||
T:               ----------------------CACCAtGAAGGAGATCTtGCTcAA----
R:         23   T13312103031313231232031110111202022232231321100222    46        
--
>379_797_2346_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X||X||||||||||||
T:               --------------GACAGaGGtGTgGTGTGGTGTCAG------------
R:         15   T23101010301000321123203113011110111212202032033333    38        
--
>379_2576_4388_F3	ENSMUST00000113126	-	2071	2099	9	37	50	150	1x3x5x1x2x7x2x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||X|X|||||||
T:               --------CtGAgAGCTccAaCCACAGcTtTTGTAAT-------------
R:          9   T00133031111232232031110111212300113030130013231220    37        
--
>380_932_1908_F3	ENSMUST00000113126	+	716	748	13	45	50	170	2x4x1x5x1x1x3x9x7	
G:        716    GGAGCCGAAGCTCAATGACAATGTCAGTGCCTACTGCCTGCATATTGCTG    748       
                             ||X|||XX||||XXX||X||||||||X||||||
T:               ------------CAaTGAcaATGTcagTGcCTACTGCCtGCATAT-----
R:         13   T122101030313112312320311101112023121300131333123.3    45        
--
>380_1688_4160_F3	ENSMUST00000113126	-	82	103	23	44	50	160	x3x10x9	
G:        103    CTCTGTATTTGAATTTTTAGCAACGTGTGACTGTCGAATATGAGAAATTG    82        
                                       X||X|||||||||X||||||||
T:               ----------------------aCGtGTGACTGTCgAATATGAG------
R:         23   T233120103101202312331131331112121121203331222223.2    44        
--
>380_2413_3079_F3	ENSMUST00000113126	-	2074	2098	10	34	50	170	3x5x1x2x14	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                          |||X||||XX|X|||||||||||||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGT----------------
R:         10   T221233310112022320311101112320001121113102123012.1    34        
--
>380_3980_2322_F3	ENSMUST00000113126	-	83	116	10	43	50	166	2x2x2x3x2x2x12A1x7	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    83        
                          ||X|X|X||X|X|X||||||||||| |X||||||
T:               ---------GTcAtCaCTgGtCaCGTGTGACTGTAGaATATGA-------
R:         10   T231220130313112312302231311112121132003331211101.2    43        
--
>380_4277_2575_F3	ENSMUST00000113126	-	2599	2625	16	42	50	190	2x3x3x8x11	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||X|||||||X||||||||||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGGGT--------
R:         16   T021302010303131123123203111011120111212001222231.3    42        
--
>380_4300_2262_F3	ENSMUST00000113126	-	2589	2615	19	45	50	156	1x2x9x8x1C5	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTACCCCTCA    2589      
                                   |X|X||||||||X|||||||X |||||
T:               ------------------TgGtGTGGTGTCaGGGTGCTgCGTACC-----
R:         19   T121201030313132312300311101112020011322331310122.1    45        
--
>381_1072_3762_F3	ENSMUST00000113126	+	277	294	33	50	50	160	3x15	
G:        277    CGCCCAGTCTGTTGATATTACATCGAGCTGGGACTTTGGTATTAGAAGAC    294       
                                                 |||X||||||||||||||
T:               --------------------------------ACTtTGGTATTAGAAGAC
R:         33   T20030201030313302310021330100112012101013303220221    50        
--
>381_2417_4873_F3	ENSMUST00000113126	-	80	110	17	47	50	190	3x14x3x2x2x2x5	
G:        110    GCTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCTATT    80        
                                 |||X|||||||||||||X||X|X|X|X||||
T:               ----------------ACTgGTCACGTGTGACTgTCgAaTaTgAGCT---
R:         17   T23301010121131123123012113111121231222231302232110    47        
--
>381_2587_2467_F3	ENSMUST00000113126	-	2065	2099	9	43	50	176	1x8x1x2x9x2x5x3C3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                         |X|||||||XX|X||||||||X|X||||X|| |||
T:               --------CtGAGAGCTccAaCCACAGCTtTtGTAAtCTCCCT-------
R:          9   T00133031111222232031110111232303113002220022232332    43        
--
>382_1651_3310_F3	ENSMUST00000113126	+	2079	2105	17	43	50	170	4x1x2x4x13x3	
G:       2079    ACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAAGCAATGTTTAG    2105      
                                 ||||XX|X|||X||||||||||||X||
T:               ----------------AGCTgtGgTTGgAGCTCTCAGAAGcAA-------
R:         17   T13022103031313231232031110112232222122021100300012    43        
--
>382_1820_4400_F3	ENSMUST00000113126	-	2598	2620	20	42	50	170	x3x14x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                    X||X|||||||||||||X|||||
T:               -------------------aGGtGTGGTGTGGTGTCaGGGTG--------
R:         20   T10030333020103000313203111011110111202001122322012    42        
--
>383_608_2898_F3	ENSMUST00000113126	-	2069	2099	9	39	50	150	1x3x5x1x2x11x2x3x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X||||||||||X|X||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAAtCT-----------
R:          9   T00133031111232232031110111232003103022231033332032    39        
--
>383_2089_3280_F3	ENSMUST00000113126	-	2602	2631	9	38	50	180	2x4x2x2x1x3x16	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                         ||X|||X|X|XX||X|||||||||||||||
T:               --------GGtGTAgAcAgaGGtGTGGTGTGGTGTCAG------------
R:          9   T23002010303113023103203111011110111212210002321021    38        
--
>383_2524_3014_F3	ENSMUST00000113126	-	2591	2612	29	50	50	180	11x2x9	
G:       2612    GAAATTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTA    2591      
                                             |||||||||||X|X||||||||
T:               ----------------------------TGTGGTGTCAGgGtGCTGGGTA
R:         29   T10233003202010300031123122203111011121210013210013    50        
--
>383_3915_2284_F3	ENSMUST00000113126	-	82	116	10	44	50	176	2x2x2x3x2x2x13x5A3	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    82        
                          ||X|X|X||X|X|X||||||||||||X|||| |||
T:               ---------GTcAtCaCTgGtCaCGTGTGACTGTCgAATAAGAG------
R:         10   T20301013031311231230222131111212112120330222201111    44        
--
>384_900_1041_F3	ENSMUST00000113126	-	2596	2624	16	44	50	176	4x3x14C1x2x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                ||||X||X||||||||||||| |X|X|||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCCGgGtGCT------
R:         16   T23102010320001001123203111011110111203203132303211    44        
--
>384_2188_2315_F3	ENSMUST00000113126	-	2586	2614	16	44	50	176	x15x2G5x2x4	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTTGCAAAGA    2586      
                                X||||||||||||||X| |||||X|X|||
T:               ---------------gGTGTGGTGTCAGGGtGGTGGGTaCcTTG------
R:         16   T01030331112322320111101112120001011001212201000221    44        
--
>384_2891_3923_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111232232031110111232000313001030111322331    36        
--
>384_3166_1171_F3	ENSMUST00000113126	-	2074	2098	9	33	50	170	3x5x1x2x14	
G:       2098    TCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTTG    2074      
                         |||X||||XX|X|||||||||||||
T:               --------TGAgAGCTccAaCCACAGCTTTTGT-----------------
R:          9   T01030311112322320111101112320001101012033101320220    33        
--
>384_3259_883_F3	ENSMUST00000113126	-	2069	2099	9	39	50	190	1x8x1x2x12x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X|||||||||||X|X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTaATCT-----------
R:          9   T00133031111222232031110111232000012032223212310212    39        
--
>384_3404_4059_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111232232031110111232300113002310032310131    36        
--
>385_783_3724_F3	ENSMUST00000113126	+	2664	2684	27	47	50	170	x16x5	
G:       2664    CTCTGCAGACCTCACCATGGTCCCGCCTGTGGCAGCATCCTTGGGCCAGG    2684      
                                           X|||||||||||||||X||||
T:               --------------------------cTGTGGCAGCATCCTTgGGCC---
R:         27   T22010303131123123203112011121110312313202000030303    47        
--
>385_998_1670_F3	ENSMUST00000113126	-	2600	2623	16	39	50	180	3x3x11x7	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                |||X||X||||||||||X||||||
T:               ---------------CAGaGGtGTGGTGTGGTgTCAGGG-----------
R:         16   T13020103031311231232031110111101312120000132313322    39        
--
>385_1289_3055_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T31330201030313112312320111101112011121220021333320    39        
--
>385_1748_2577_F3	ENSMUST00000113126	-	2592	2620	20	48	50	170	3x13x1x2x3x2x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2592      
                                    |||X||||||||||||XX|X||X|X||||
T:               -------------------AGGtGTGGTGTGGTGTcaGgGTgCtGGGT--
R:         20   T23102010301000310123203111011110111332201233100120    48        
--
>385_2530_66_F3	ENSMUST00000113126	-	2600	2631	6	37	50	172	4C1x2T2x3x13x5	
G:       2631    TTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCC    2600      
                      |||| |X| ||X||X||||||||||||X||||
T:               -----GGTGCAgATAGaGGtGTGGTGTGGTGTcAGGG-------------
R:          6   T12010301131123320203111011110111312000031223010012    37        
--
>385_2739_4371_F3	ENSMUST00000113126	-	719	750	5	36	50	180	x4x5x1x11x2x3x6	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|||X||||XX||||||||||X|X||X|||||
T:               ----cAATaTGCAggCAGTAGGCACtGaCAtTGTCA--------------
R:          5   T10320103031313231213203111111100112101033001213322    36        
--
>386_2040_1400_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T02010010223033022123203111011110111213.20001202220    37        
--
>386_2588_3938_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111232232031110111232000103010.00331332202    36        
--
>387_113_2785_F3	ENSMUST00000113126	-	2600	2625	15	40	50	186	5x3x14T3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||X||||||||||||| |||
T:               --------------GACAGaGGtGTGGTGTGGTGTCTGGG----------
R:         15   T23302010300301121123203111011110111221002302212133    40        
--
>387_267_954_F3	ENSMUST00000113126	-	720	750	5	35	50	210	4x5x4x8x2x8	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                     ||||X||||X|||X|||||||X|X|||||||
T:               ----CAATaTGCAgGCAgTAGGCACtGaCATTGTC---------------
R:          5   T13132103031313031013203111111130112300000331313322    35        
--
>387_810_2805_F3	ENSMUST00000113126	-	719	753	2	36	50	190	1x2x4x6x10x1x1x3x7	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X|||||X|||||||||XXX||X||||||
T:               -CaGcAATaTGCAGgCAGTAGGCActgACaTTGTCA--------------
R:          2   T13020103031312231213203131021230112102203332322222    36        
--
>387_1143_4288_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23302010321303021123203111011110111102223221112300    40        
--
>387_1414_870_F3	ENSMUST00000113126	-	2601	2627	13	39	50	170	4x3x3x12x2x3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                             ||||X||X||X|||||||||||X|X||
T:               ------------TAGAcAGaGGtGTGGTGTGGTGtCaGG-----------
R:         13   T23302010301303220123203111011110112202030330011031    39        
--
>387_1676_4661_F3	ENSMUST00000113126	-	2066	2099	9	42	50	200	1x8x1x2x14x3x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCGAGATCTT    2066      
                         |X|||||||XX|X|||||||||||||X||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTaATcTgCC--------
R:          9   T00133031111222232031110111232000112033203002322102    42        
--
>387_2281_969_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	5x3x12x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||X|X||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGG-----------
R:         15   T23302010301001321123203111011110113202021010223000    39        
--
>387_2396_4539_F3	ENSMUST00000113126	-	2060	2098	10	48	50	182	8x1x2x10x2x5A1A2x2x4	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                          ||||||||XX|X|||||||||X|X|||| | ||X|X|||
T:               ---------TGAGAGCTccAaCCACAGCTTtTgTAATATACCtGtTCA--
R:         10   T02333031211222232031110111232030313033331031302131    48        
--
>387_2411_551_F3	ENSMUST00000113126	-	2593	2623	17	47	50	190	3x3x16x2x1x2x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                 |||X||X|||||||||||||||X|XX|X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAGgGtgCtGGG---
R:         17   T23102010301303102123203111011110111212200333100202    47        
--
>387_3007_545_F3	ENSMUST00000113126	-	716	750	5	39	50	202	4x5A11x2x6x2C3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATTGGAGAGACAGGT    716       
                     ||||X|||| |||||||||||X|X|||||X| |||
T:               ----CAATaTGCAAGCAGTAGGCACtGaCATTGtCCTTG-----------
R:          5   T11020103031310231213203111111130122020103010302222    39        
--
>387_3555_1891_F3	ENSMUST00000113126	+	2589	2624	7	42	50	172	2x1x4G1x3x1x2T12x8	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                       ||XX||| |X||XX| ||||||||||||X|||||||
T:               ------GGtaCCCGGcACccTTACACCACACCACaCCTCTGT--------
R:          7   T23302010301003001123203111011110113102221112012232    42        
--
>387_3597_625_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010103301321123203111011110111221201323123122    36        
--
>387_3820_2414_F3	ENSMUST00000113126	-	2076	2099	9	32	50	160	1x8x1x2x12	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTCACCATGAAGGAGATCTT    2076      
                         |X|||||||XX|X|||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTT------------------
R:          9   T00133031111222232031110111232000312010223322002321    32        
--
>387_4020_1087_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010302301231123203111011110111201200333230112    36        
--
>388_559_3690_F3	ENSMUST00000113126	-	2602	2621	19	38	50	160	1x3x16	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                   |X||X|||||||||||||||
T:               ------------------GaGGtGTGGTGTGGTGTCAG------------
R:         19   T23302010301201300313203111011110111212321331333330    38        
--
>388_838_2875_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x5x9x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||||X||||||||X|||||||
T:               ---------------GAcAGAGgTGTGGTGTgGTGTCAG-----------
R:         16   T31330201030313312012223111101112011121233321212222    39        
--
>388_1606_3630_F3	ENSMUST00000113126	-	2062	2099	9	46	50	186	1x3x5x1x2x11x2x4G2x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTTCTT    2062      
                         |X||X||||XX|X||||||||||X|X||| ||X|||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAATGTGcCTGTT----
R:          9   T00133031111232232031110111232003133031112021101302    46        
--
>388_2078_4854_F3	ENSMUST00000113126	-	2596	2620	19	43	50	176	3x8x10G3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||||||X||||||||| |||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGGGCT-------
R:         19   T13020103031310231232031110111201112120000323120222    43        
--
>388_2488_2050_F3	ENSMUST00000113126	-	2599	2627	13	41	50	190	2x2x3x3x16x3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                             ||X|X||X||X|||||||||||||||X||
T:               ------------TAgAcAGaGGtGTGGTGTGGTGTCAGgGT---------
R:         13   T23102010311003020123203111011110111212201233222221    41        
--
>388_3059_3060_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x13x3	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X||||||||||||X||
T:               ------------GAGCTccAaCCACAGCTTTTGtAA--------------
R:         13   T00133031111212232031110111232000133000031210301321    36        
--
>388_3369_3095_F3	ENSMUST00000113126	+	2604	2626	22	44	50	170	1x12x6x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                      |X|||||||||||X|||||X|||
T:               ---------------------GaCACCACACCACaCCTCTgTCT------
R:         22   T23302010302323302303203111011110112102222122232222    44        
--
>388_4243_4426_F3	ENSMUST00000113126	-	90	114	12	36	50	170	4x3x2x2x14	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATTG    90        
                            ||||X||X|X|X|||||||||||||
T:               -----------CATCaCTgGtCaCGTGTGACTGTCG--------------
R:         12   T23312103031313231230223131111212112333203313200022    36        
--
>389_113_1643_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000112000100321332312    34        
--
>389_645_3100_F3	ENSMUST00000113126	-	2599	2625	15	41	50	170	2x3x3x12x2x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               ||X||X||X|||||||||||X|X||||
T:               --------------GAcAGaGGtGTGGTGTGGTGtCaGGGT---------
R:         15   T23102010321301023123203111011110112202001321012322    41        
--
>389_1474_1702_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	1x4x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |X|||X|||||||||||||||
T:               --------------GaCAGaGGTGTGGTGTGGTGT---------------
R:         15   T23302010320001031123201111011110111032203031031321    35        
--
>389_2025_3527_F3	ENSMUST00000113126	-	2068	2098	10	40	50	170	3x5x1x2x7x2x7x4	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                          |||X||||XX|X||||||X|X||||||X|||
T:               ---------TGAgAGCTccAaCCACAGcTtTTGTAAtCTG----------
R:         10   T00133331111202232031110111222300113012210302222122    40        
--
>389_2115_3419_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	1x6x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             |X|||||X||X|||||||||||||
T:               ------------TaGACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T23102010303301221123203111011110111232322233023302    36        
--
>389_2168_3019_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T23113010301003321123203111011110111102202322332331    39        
--
>389_2168_3019_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T23113010301003321123203111011110111102202322332331    35        
--
>389_2204_1110_F3	ENSMUST00000113126	-	2595	2625	15	45	50	170	2x3x3x12x4x1x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               ||X||X||X|||||||||||X|||XX|X|||
T:               --------------GAcAGaGGtGTGGTGTGGTGtCAGggTgCTG-----
R:         15   T23302010303101023123203111011110113212321332120322    45        
--
>389_2458_3827_F3	ENSMUST00000113126	-	770	788	10	28	50	170	1x18	
G:        788    TGCATGCGTTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    770       
                          |X|||||||||||||||||
T:               ---------TgGCGGAAAATCCGTGTCG----------------------
R:         10   T32033210200033020003203111231200103312201222312132    28        
--
>389_2474_2703_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02130201030313112212320111101112011121333103332323    38        
--
>389_2711_1008_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T03102010300031323123203111011110111212303302113120    38        
--
>389_2825_2352_F3	ENSMUST00000113126	-	2602	2629	11	38	50	160	2x2x2x3x3x13x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||X|X|X||X||X||||||||||||X||
T:               ----------TGtAgAcAGaGGtGTGGTGTGGTGTcAG------------
R:         11   T33302010303133323123203111011110111312323222330133    38        
--
>389_2843_2683_F3	ENSMUST00000113126	+	2605	2627	23	45	50	176	17x1A4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||||||X ||||
T:               ----------------------ACACCACACCACACCTCtATCTA-----
R:         23   T23301210300303303113223111011110111102203322320133    45        
--
>389_2925_2800_F3	ENSMUST00000113126	-	1426	1451	15	40	50	180	2x2x8x10x4	
G:       1451    AGAAAACTGAACAGGAAGTACAGGTGCTTGTAGTCATGGCAGAAGAAATC    1426      
                               ||X|X|||||||X|||||||||X|||
T:               --------------GAaGtACAGGTGcTTGTAGTCAtGGC----------
R:         15   T22010303131323122203112011120113212101030003321022    40        
--
>389_3012_2158_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	1x4x3x13x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |X|||X||X||||||||||||X|||
T:               --------------GaCAGaGGtGTGGTGTGGTGTcAGG-----------
R:         15   T23302010321000001123203111011110111012011322022312    39        
--
>389_3682_1485_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x11x7x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||||||||||X||||||X||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAgGG---------
R:         16   T02330201030313312312320111101112011121000323300023    41        
--
>389_3824_1684_F3	ENSMUST00000113126	-	1434	1463	6	35	50	186	4x4x3A2x2x14	
G:       1463    CAAAGTGCGTCGGACTCGAAGTACAGGTGCTTGTACCAGAAGGAGAAGAA    1434      
                      ||||X|||X|| ||X|X|||||||||||||
T:               -----TGCGtCGGaCTAGAaGtACAGGTGCTTGTA---------------
R:          6   T23302013302301123223203112011320113320200020133332    35        
--
>389_4050_2851_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000111011120323302102    34        
--
>390_315_3197_F3	ENSMUST00000113126	-	82	114	12	44	50	170	4x3x2x2x11x2x3x2x4	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    82        
                            ||||X||X|X|X||||||||||X|X||X|X|||
T:               -----------CATCaCTgGtCaCGTGTGACTGtCgAAtAtGAG------
R:         12   T23220103031313231230222131111212102120130122230222    44        
--
>390_1396_28_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111222232031110111202000113020130321232200    36        
--
>390_1778_1747_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	4x3x12x2x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                ||||X||X|||||||||||X|X|||
T:               ---------------ACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         16   T23102010301001301123203111011110112232003102020202    40        
--
>390_1944_2009_F3	ENSMUST00000113126	-	2600	2624	16	40	50	176	4x3x14C3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                ||||X||X||||||||||||| |||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCCGGG----------
R:         16   T23302013301201001123203111011110111203000322200023    40        
--
>390_4056_3786_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	3x4x3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             |||X|||X||X||||||||||||
T:               ------------TAGaCAGaGGtGTGGTGTGGTGT---------------
R:         13   T03102010301303231123203111011110111022210323131122    35        
--
>391_1694_434_F3	ENSMUST00000113126	+	2605	2628	27	50	50	186	3x15C5	
G:       2605    GAAAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTAC    2628      
                                           |||X|||||||||||||| |||||
T:               --------------------------ACAcCACACCACACCTCTCTCTAC
R:         27   T11230112323302010303122103111201111011110222222231    50        
--
>392_52_4336_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111202232031110111232300113011211001301222    36        
--
>392_326_1221_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x7x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X||||||X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGG---------
R:         18   T02330201030313112312320111101112011121100331212123    41        
--
>392_729_3114_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113011130012001103    36        
--
>392_757_4998_F3	ENSMUST00000113126	+	2593	2621	11	39	50	176	4x3T1x2x4x14	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                           ||||X|| |X|X|||X|||||||||||||
T:               ----------CCCAgCATCcTgACAcCACACCACACCTC-----------
R:         11   T23302010300001031323202110011110111102200301020121    39        
--
>392_911_1584_F3	ENSMUST00000113126	-	2598	2620	19	41	50	170	3x14x1x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                                   |||X|||||||||||||XX||||
T:               ------------------AGGtGTGGTGTGGTGTCagGGTG---------
R:         19   T02020103031310231232031110111101112000011102000110    41        
--
>392_1027_4109_F3	ENSMUST00000113126	-	2592	2625	15	48	50	186	5x11C3x2x5x2x1x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2592      
                               |||||X|||||||||| |||X|X||||X|XX|||
T:               --------------GACAGaGGTGTGGTGTCGTGtCaGGGTgCtgGGT--
R:         15   T23302010300201021123201111011123110202001330000120    48        
--
>392_1446_2052_F3	ENSMUST00000113126	-	2599	2624	16	41	50	180	4x3x14x2x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                ||||X||X|||||||||||||X|X||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCaGgGT---------
R:         16   T23302010300301031123203111011110111202301323201001    41        
--
>392_1599_3375_F3	ENSMUST00000113126	+	2598	2622	16	40	50	182	3G2T18	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                ||| || ||||||||||||||||||
T:               ---------------CACGCTTACACCACACCACACCTCT----------
R:         16   T23302010301303321133203111011110111102220303023111    40        
--
>392_1710_2799_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x11x5x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||||||||||X||||X||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTcAGGG---------
R:         16   T31330201030313312312320111101112011101200002001311    41        
--
>392_2237_574_F3	ENSMUST00000113126	-	2590	2625	14	49	50	186	2x3x3x12x2x3T5x2x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTACC    2590      
                              ||X||X||X|||||||||||X|X|| |||||X|X||
T:               -------------GAcAGaGGtGTGGTGTGGTGtCaGGTTGCTGgGtAC-
R:         14   T13020103031313231232031110111101132020101321100312    49        
--
>392_2272_946_F3	ENSMUST00000113126	-	2587	2612	24	49	50	166	11x2x7C1x4	
G:       2612    TCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCTTT    2587      
                                        |||||||||||X|X|||||| |X|||
T:               -----------------------TGTGGTGTCAGgGtGCTGGGCAcCTT-
R:         24   T30230201030313112312323311101112121031321003100203    49        
--
>392_2379_3997_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T23302032303121123123203111011110111212220330013112    38        
--
>392_2436_1798_F3	ENSMUST00000113126	-	2593	2625	15	47	50	170	1x4x3x13x3x2x1x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                               |X|||X||X||||||||||||X||X|XX|X|||
T:               --------------GaCAGaGGtGTGGTGTGGTGTcAGgGtgCtGGG---
R:         15   T23302010301001301123203111011110111312202330100332    47        
--
>392_2455_2350_F3	ENSMUST00000113126	-	2598	2625	16	43	50	200	2x3x11x2x10	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                ||X||X||||||||||X|X|||||||||
T:               ---------------GAcAGaGGTGTGGTGTgGtGTCAGGGTG-------
R:         16   T02130201030313112312320111101112031121200110001023    43        
--
>392_2703_3239_F3	ENSMUST00000113126	-	2590	2625	15	50	50	166	1x4x3x12x2x3x1x3x1T5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                               |X|||X||X|||||||||||X|X||XX||X |||||
T:               --------------GaCAGaGGtGTGGTGTGGTGtCaGGgtGCtTGGTAC
R:         15   T23302010301001331123203111011110110232020130010131    50        
--
>392_2799_277_F3	ENSMUST00000113126	-	2601	2625	15	39	50	190	5x3x12x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||X||||
T:               --------------GACAGaGGtGTGGTGTGGTGtCAGG-----------
R:         15   T23302010303303021123203111011110110212010333033100    39        
--
>392_2971_1563_F3	ENSMUST00000113126	-	2599	2617	23	41	50	170	12x7	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                       ||||||||||||X||||||
T:               ----------------------TGTGGTGTGGTGtCAGGGT---------
R:         23   T23302010301103120123103111011110113212001300130103    41        
--
>392_3142_2335_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x14x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGG-----------
R:         17   T23302010332303010123203111011110111202030120311000    39        
--
>392_3309_2296_F3	ENSMUST00000113126	+	2599	2622	17	40	50	166	2x1x2T18	
G:       2599    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                 ||XX| ||||||||||||||||||
T:               ----------------ACccTTACACCACACCACACCTCT----------
R:         17   T23300210301003300113203111011110111102220330011203    40        
--
>393_1117_600_F3	ENSMUST00000113126	-	2600	2623	18	41	50	200	3x11x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X|||||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAGGG---------
R:         18   T02330201030313112312320111101112011121200010030023    41        
--
>393_2066_1824_F3	ENSMUST00000113126	-	88	114	12	38	50	190	4x3x2x2x16	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    88        
                            ||||X||X|X|X|||||||||||||||
T:               -----------CATCaCTgGtCaCGTGTGACTGTCGAA------------
R:         12   T13102010331313231230222131111212112320010110202022    38        
--
>393_2562_3928_F3	ENSMUST00000113126	-	87	116	10	39	50	200	2x4x3x2x2x17	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    87        
                          ||X|||X||X|X|X||||||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCGAAT-----------
R:         10   T23302110231313231230222131111212112320310303300321    39        
--
>394_108_4160_F3	ENSMUST00000113126	-	1919	1947	17	45	50	190	x4x9x2x5x9	
G:       1947    CTGGAGAGCACGCTGGGAAATGTACACTTTTGTTCTTTGTTTGCTGTTCG    1919      
                                 X|||X||||||||X|X||||X||||||||
T:               ----------------gAAAtGTACACTTtTgTTCTtTGTTTGCT-----
R:         17   T22010303131123123200111311120303102230110013220212    45        
--
>394_1060_1461_F3	ENSMUST00000113126	-	2593	2620	19	46	50	180	3x10x7x2x3x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAATC    2593      
                                   |||X|||||||||X||||||X|X||X||
T:               ------------------AGGtGTGGTGTGGtGTCAGGgTgCTgGG----
R:         19   T02020103031310231232021110111100112120110320003001    46        
--
>394_1894_1411_F3	ENSMUST00000113126	-	2599	2625	16	42	50	170	2x3x3x8x8x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||X|||||||X|||||||X||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGT--------
R:         16   T02330201030313312312320311101112011121220131333201    42        
--
>394_4089_4979_F3	ENSMUST00000113126	-	2599	2631	9	41	50	162	2x1T2A4x3x11x5x3	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                         ||X || ||||X||X||||||||||X||||X||
T:               --------GGtTTAAACAGaGGtGTGGTGTGGTgTCAGgGT---------
R:          9   T23302013302003001123203111011110121212201201030201    41        
--
>395_1063_3132_F3	ENSMUST00000113126	+	2591	2621	9	39	50	162	1x5x4G2T11x2x4	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                         |X||||X||| || |||||||||||X|X|||
T:               --------TaCCCAgCACGCTTACACCACACCAcAcCTC-----------
R:          9   T23102010301001331133203111011110121302230133102012    39        
--
>395_1077_1193_F3	ENSMUST00000113126	-	2596	2623	18	45	50	186	3x11x7x3C3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||||||||||X||||||X|| |||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGGCGCT-----
R:         18   T02330201030313112312320111101112011121000333222120    45        
--
>395_2066_2068_F3	ENSMUST00000113126	-	2602	2622	21	41	50	170	1x9x11	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                     |X||||||||X||||||||||
T:               --------------------AgAGGTGTGGtGTGGTGTCAG---------
R:         21   T01011122033020103033312201111031110111212132232222    41        
--
>396_312_1680_F3	ENSMUST00000113126	-	2595	2627	14	46	50	176	2x2T2x11x8x2x1x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                              ||X| ||X||||||||||X|||||||X|XX|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAGgGtgCTG----
R:         14   T0233020103031031233232011110111201112122030321312.    46        
--
>396_1892_3272_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2330201031000102212320311101111011110222013333210.    40        
--
>396_2181_1751_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	1x6x3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             |X|||||X||X||||||||||||
T:               ------------TaGACAGaGGtGTGGTGTGGTGT---------------
R:         13   T1333201030130122112320311101111011100330330302201.    35        
--
>396_2708_2913_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T2330201030100100121320311101111011110222232323322.    40        
--
>396_2792_1610_F3	ENSMUST00000113126	+	2604	2621	22	39	50	160	13x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                      |||||||||||||X||||
T:               ---------------------GACACCACACCACaCCTC-----------
R:         22   T2331201032100301031320211101111011210223031222221.    39        
--
>396_3271_4171_F3	ENSMUST00000113126	-	87	111	15	39	50	170	4x2x2x13x4	
G:        111    CTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    87        
                               ||||X|X|X||||||||||||X|||
T:               --------------CACTgGtCaCGTGTGACTGTCgAAT-----------
R:         15   T2310211030310101123022213111121211212031333302113.    39        
--
>397_1368_2224_F3	ENSMUST00000113126	-	78	112	15	49	50	170	2x3x1x1x17x1x1x2x2x5	
G:        112    GCTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGT    78        
                               ||X||XXX||||||||||||||||XXX|X|X||||
T:               --------------TCaCTggtCACGTGTGACTGTCGAataTgAgCTAG-
R:         15   T2330101030313112312333211311112121123220233233232.    49        
--
>397_2159_3556_F3	ENSMUST00000113126	-	2602	2629	11	38	50	180	x6x3x3x2x14	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           X|||||X||X||X|X|||||||||||||
T:               ----------tGTAGAcAGaGGtGtGGTGTGGTGTCAG------------
R:         11   T1330201130311322312120310101111011121222320132002.    38        
--
>398_1544_2517_F3	ENSMUST00000113126	-	88	116	11	39	50	170	2x4x3x2x11x4x3	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATT    88        
                           ||X|||X||X|X||||||||||X|||X||
T:               ----------GTcATCaCTgGtCACGTGTGACtGTCgAA-----------
R:         11   T23302010303131323123022113111121111202001203321030    39        
--
>398_1614_3800_F3	ENSMUST00000113126	-	2602	2631	9	38	50	166	3x1x1G5x3x12x4	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                         |||XX |||||X||X|||||||||||X|||
T:               --------GGTgtGGACAGaGGtGTGGTGTGGTGtCAG------------
R:          9   T23302013301301021123203111011110112212221330323322    38        
--
>398_1725_3929_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	1x2x15x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |X|X||||||||||||||X||||
T:               ----------------CaGaGGTGTGGTGTGGTGtCAGG-----------
R:         17   T01002013313011310223201111011110113212033133023132    39        
--
>398_2279_1856_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	2x14x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       ||X|||||||||||||X||||
T:               ----------------------ACaCCACACCACACCTcTGTC-------
R:         23   T02202201030310312323023131011110111102121123002132    43        
--
>398_2901_3031_F3	ENSMUST00000113126	-	1420	1449	19	48	50	180	2x4x3x4x2x12x3	
G:       1449    AAAGAAAACTGAACAGGCAGTACAGGTGCTTGTAGTCATGGCTGCTTAAA    1420      
                                   ||X|||X||X|||X|X|||||||||||X||
T:               ------------------AGtACAgGTgCTTgTaGTCATGGCTGCtTA--
R:         19   T13020103031310231232031110133202102121310321310330    48        
--
>398_3157_3750_F3	ENSMUST00000113126	-	2605	2626	14	35	50	160	1x5x3x13	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              |X||||X||X||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGT---------------
R:         14   T23302010323000021123203111011110111131020323103230    35        
--
>398_3180_2080_F3	ENSMUST00000113126	-	2597	2617	23	43	50	170	x16x5	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                       X|||||||||||||||X||||
T:               ----------------------tGTGGTGTGGTGTCAGgGTGC-------
R:         23   T22012300131123010213333111011110111212201133002002    43        
--
>398_3834_2202_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	1x3x3x13x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                |X||X||X||||||||||||X||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTcAGGG----------
R:         16   T23301032301001312123203111011110111312000333033203    40        
--
>398_4143_3472_F3	ENSMUST00000113126	-	2601	2620	20	39	50	180	15x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||||||||||||||X||||
T:               -------------------AGGTGTGGTGTGGTGtCAGG-----------
R:         20   T01001013301211323223201111011110113212010113011122    39        
--
>399_629_4495_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	x3x11x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  X||X||||||||||X|||||||||
T:               -----------------cAGaGGTGTGGTGTgGTGTCAGGG---------
R:         18   T02330201030310112312320111101112011121200303110323    41        
--
>399_700_1692_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010302003001123203111011110111202231003012312    36        
--
>399_708_3450_F3	ENSMUST00000113126	-	2604	2624	16	36	50	190	7x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                |||||||X|||||||||||||
T:               ---------------ACAGAGGtGTGGTGTGGTGTC--------------
R:         16   T23102013303301011122203111011110111221230332200222    36        
--
>399_816_3510_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T23302310321031122123203111011110111210101310220021    37        
--
>399_1055_1394_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x11x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X||||||||||X||||
T:               --------------GACAGaGGtGTGGTGTGGTgTCAG------------
R:         15   T20112010301001321123203111011110121212320000323322    38        
--
>399_1062_3740_F3	ENSMUST00000113126	-	2601	2623	18	40	50	176	3x14A5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  |||X||||||||||||| |||||
T:               -----------------CAGaGGTGTGGTGTGGTATCAGG----------
R:         18   T02130201030313312312020111101111013321202020222133    40        
--
>399_1089_2462_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	13x2x4x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||X|X|||X|||
T:               ----------------------ACACCACACCACAcCtCTGtCTA-----
R:         23   T23302010303301332223203111011110111003221322303233    45        
--
>399_1228_3684_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x7x10	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||X|||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAAT-------------
R:          9   T00133031111222232011110111212000113033020213310203    37        
--
>399_1241_1401_F3	ENSMUST00000113126	-	2601	2624	16	39	50	180	4x3x14x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                ||||X||X|||||||||||||X||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCaGG-----------
R:         16   T23102010300301011123203111011110111202023320001010    39        
--
>399_1266_4968_F3	ENSMUST00000113126	-	88	116	10	38	50	170	2x4x3x2x2x12x4	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    88        
                          ||X|||X||X|X|X|||||||||||X|||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTcGAA------------
R:         10   T23302013031313231230222131111212111320231331222212    38        
--
>399_1405_1749_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T00130201030313112312320111101112011121220003101113    39        
--
>399_1708_2985_F3	ENSMUST00000113126	+	2591	2622	9	40	50	186	1x5x4x1x2T13x5	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                         |X||||X|||XX| |||||||||||||X||||
T:               --------TaCCCAgCACccTTACACCACACCACAcCTCT----------
R:          9   T23102010301001331123203111011110111202220322230113    40        
--
>399_1839_3337_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02130201030313112312320111101112011121320321302132    38        
--
>399_1998_2718_F3	ENSMUST00000113126	-	2599	2625	14	40	50	170	2x3x3x8x2x9	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                              ||X||X||X|||||||X|X||||||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGGT----------
R:         14   T23332103031310231232031110111202112120012331300212    40        
--
>399_2151_883_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x7x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X||||||X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGG---------
R:         18   T02330201030313112312320111101112011121000303200320    41        
--
>399_2337_1617_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T23112010301301321123203111011110111302220102032100    35        
--
>399_2366_2558_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	2x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  ||X||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTC--------------
R:         18   T23102013313301021323201111011110111230322022131132    36        
--
>399_2367_1762_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	5x3x2x12x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|X|||||||||||X||
T:               --------------GACAGaGGtGtGGTGTGGTGTCaGG-----------
R:         15   T03122013300001321123203131011110111232013022222112    39        
--
>399_2420_1850_F3	ENSMUST00000113126	-	2593	2620	23	50	50	180	3x16x2x1x1x5	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGG    2593      
                                       |||X|||||||||||||||X|XXX||||
T:               ----------------------AGGtGTGGTGTGGTGTCAGgGtgcTGGG
R:         23   T12323302010303131023123203111011110111212203222100    50        
--
>399_2889_4726_F3	ENSMUST00000113126	-	2597	2626	13	42	50	186	x3x3x3C7x13	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                             X||X||X|| |||||||X||||||||||||
T:               ------------aGAcAGaGGCGTGGTGTgGTGTCAGGGTGC--------
R:         13   T13130103031312231232033110111201112120011330311020    42        
--
>399_3057_666_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031131222232011110111232000213011130131312012    36        
--
>399_3183_1780_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x2x3x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||X||||||||||X|||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T02330201030310312312320111101112011121230232313010    39        
--
>399_3473_2428_F3	ENSMUST00000113126	-	2073	2099	9	35	50	170	1x3x5x1x2x15	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                         |X||X||||XX|X||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTA---------------
R:          9   T00133031111202232011110111232000113101200323112022    35        
--
>399_3773_2353_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T02333031111202232031110111232003113003220132132232    36        
--
>400_412_4447_F3	ENSMUST00000113126	-	718	753	2	37	50	180	1x2x10x7x2x1x1x2x4x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                  |X|X|||||||||X||||||X|XXX|X|||X|||||
T:               -CaGcAATATGCAGgCAGTAGgCactGaCATtGTCAT-------------
R:          2   T13020103331312231213223233111131112132310201030323    37        
--
>400_930_186_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x1x2x18	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||XX|X|||||||||||||||||
T:               ---------------GAcaGaGGTGTGGTGTGGTGTCA------------
R:         16   T31330201030313312202320111101111011121033302022311    38        
--
>400_1145_1803_F3	ENSMUST00000113126	+	2593	2622	11	40	50	166	4x4x1x2T11x2x5	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           ||||X|||XX| |||||||||||X|X||||
T:               ----------CCCAgCACccTTACACCACACCAcAcCTCT----------
R:         11   T23302010300001031123203111011110101002223331323122    40        
--
>400_1439_3682_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	3x3x14x2x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |||X||X|||||||||||||X|X||
T:               -------------AGAcAGaGGTGTGGTGTGGTgTcAG------------
R:         14   T23102010301002220123201111011110101012220233122220    38        
--
>400_2114_2263_F3	ENSMUST00000113126	-	2600	2624	16	40	50	176	4x3x13A4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                ||||X||X|||||||||||| ||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTAAGGG----------
R:         16   T23102010301301001123203111011110111302000302331302    40        
--
>400_2900_4230_F3	ENSMUST00000113126	-	2599	2626	14	41	50	200	3x3x3x12x7	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                              |||X||X||X|||||||||||X||||||
T:               -------------AGAcAGaGGtGTGGTGTGGTGtCAGGGT---------
R:         14   T23302011303311223123203111011110112212001322221132    41        
--
>400_2957_1811_F3	ENSMUST00000113126	-	86	112	14	40	50	170	2x3x2x2x15x3	
G:        112    CTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    86        
                              ||X||X|X|X||||||||||||||X||
T:               -------------TCaCTgGtCaCGTGTGACTGTCGAaTA----------
R:         14   T03102013331311231230223131111212112323331323312000    40        
--
>400_3270_3622_F3	ENSMUST00000113126	-	2595	2615	25	45	50	170	5x9x7	
G:       2615    AAATTCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                         |||||X||||||||X||||||
T:               ------------------------TGGTGtGGTGTCAGgGTGCTG-----
R:         25   T00102011301202200333302101011310111212301132130312    45        
--
>400_3350_517_F3	ENSMUST00000113126	-	2593	2615	16	38	50	170	1x11x8x3	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAG    2593      
                                |X||||||||||X|||||||X||
T:               ---------------TgGTGTGGTGTCaGGGTGCTgGG------------
R:         16   T00133031111232232011110111232001132000220010102303    38        
--
>400_3521_411_F3	ENSMUST00000113126	-	2600	2620	21	41	50	190	11x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGGG---------
R:         21   T02130201030310312332320111101112011121200031322000    41        
--
>401_1079_4045_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232011110111232000132000020313333122    33        
--
>401_1524_3611_F3	ENSMUST00000113126	-	2640	2661	13	34	50	180	5x12x5	
G:       2661    AGATCAAATGCAGGGACCATGGTGAGGTCTGCAGAAATTCTAAACAATCA    2640      
                             |||||X|||||||||||X||||
T:               ------------GGGACcATGGTGAGGTCtGCAG----------------
R:         13   T23302010333300021113101122012113120302203000003003    34        
--
>401_1635_1159_F3	ENSMUST00000113126	-	719	750	5	36	50	220	x10x4x7x2x9	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|||||||||X|||X||||||X|X||||||||
T:               ----cAATATGCAGgCAGtAGGCACtGaCATTGTCA--------------
R:          5   T23020103331312231233203113111130112122110002213231    36        
--
>401_1826_4010_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T20122310330203000113203111011110111102220203023022    40        
--
>401_2138_2580_F3	ENSMUST00000113126	-	2600	2628	12	40	50	190	3x3x2x15x2x4	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                            |||X||X|X||||||||||||||X|X|||
T:               -----------GTAgACaGaGGTGTGGTGTGGTGtCaGGG----------
R:         12   T01001013300013321223201111011110113202003103201220    40        
--
>401_2657_2651_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T32302010323031023123203111011110111213300102231311    37        
--
>401_2765_2989_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T30230201030310112332320111101112011121220003332101    39        
--
>401_3510_2779_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T20302010301002331313203111011110111302221033203331    41        
--
>401_3612_4776_F3	ENSMUST00000113126	-	2064	2099	9	44	50	172	1x3x5x1x2x13x3C3G3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGGATCTT    2064      
                         |X||X||||XX|X||||||||||||X|| ||| |||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAACCTGGCTG------
R:          9   T00133031111202232011110111232000103010210321312000    44        
--
>402_1546_3958_F3	ENSMUST00000113126	-	78	114	12	48	50	190	4x3x2x2x14x3x2x2x1x4	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGTG    78        
                            ||||X||X|X|X|||||||||||||X||X|X|XX|||
T:               -----------CATCaCTgGtCaCGTGTGACTGTCGaATaTgAgcTAG--
R:         12   T13012103031313231230223131111212112330303323023201    48        
--
>402_2988_1885_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T23302010300003021123203111011110111030030132210332    35        
--
>402_3109_1951_F3	ENSMUST00000113126	-	2602	2627	14	39	50	186	2x2T13x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X| |||||||||||||X|||||||
T:               -------------TAgATAGAGGTGTGGTGTgGTGTCAG-----------
R:         14   T02330201030310312332220111101112011121220222302132    39        
--
>402_3616_4577_F3	ENSMUST00000113126	-	2596	2628	12	44	50	190	2x1x3x2x15x4x1x5	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                            ||XX||X|X||||||||||||||X|||XX||||
T:               -----------GTagACaGaGGTGTGGTGTGGTGtCAGggTGCT------
R:         12   T01002013321010021223201111011110113212231132002103    44        
--
>403_808_3274_F3	ENSMUST00000113126	-	722	753	2	33	50	160	1x2x4x6x10x1x1x3x4	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    722       
                  |X|X|||X|||||X|||||||||XXX||X|||
T:               -CaGcAATaTGCAGgCAGTAGGCActgACaTTG-----------------
R:          2   T13020103031312231213203133221330102310311123030122    33        
--
>403_1568_4450_F3	ENSMUST00000113126	-	2597	2623	14	40	50	170	3x3x12x4x2x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                              |||X||X|||||||||||X|||X|X||
T:               -------------CAGaGGtGTGGTGTGGTGtCAGgGtGC----------
R:         14   T22010303131123123203111011110113212200130311322111    40        
--
>404_821_675_F3	ENSMUST00000113126	-	2604	2623	18	37	50	180	1x19	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                  |X||||||||||||||||||
T:               -----------------CaGAGGTGTGGTGTGGTGTC-------------
R:         18   T02130201030310312032220111101111011123320333222100    37        
--
>404_886_807_F3	ENSMUST00000113126	-	2597	2620	19	42	50	180	3x8x10x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||X|||||||||X||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGtGC--------
R:         19   T13200103031310231232031110111201112120001313323002    42        
--
>404_1151_3744_F3	ENSMUST00000113126	-	2601	2625	14	38	50	170	2x3x3x8x9	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                              ||X||X||X|||||||X||||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGG------------
R:         14   T23302103031313231232031110111201112120232033020312    38        
--
>404_1204_3394_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T13302010301001300123203111011110111102220322230201    40        
--
>404_1552_2788_F3	ENSMUST00000113126	-	2597	2625	15	43	50	190	x5x3x14x2x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               X||||X||X|||||||||||||X|X||||
T:               --------------gACAGaGGtGTGGTGTGGTGTCaGgGTGC-------
R:         15   T10302010300301321123203111011110111202101133312110    43        
--
>404_1779_3703_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T23302010303031121323203111011110111212233333133013    38        
--
>404_2255_4395_F3	ENSMUST00000113126	-	2602	2620	21	39	50	190	19	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTCAG-----------
R:         21   T31330201230310312332320111101111011121220332122222    39        
--
>404_2642_4546_F3	ENSMUST00000113126	-	2595	2623	17	45	50	182	3x3x15C2C4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                 |||X||X|||||||||||||| || ||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCACGGCGCTG-----
R:         17   T13102010302001020123203111011110111211303332112030    45        
--
>404_2659_1913_F3	ENSMUST00000113126	-	2602	2620	23	41	50	170	3x16	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                       |||X|||||||||||||||
T:               ----------------------AGGtGTGGTGTGGTGTCAG---------
R:         23   T03123302010300131033123203111011110111212323331212    41        
--
>404_2952_1186_F3	ENSMUST00000113126	-	2596	2617	23	44	50	160	14x1x1x6	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                       ||||||||||||||XXX|||||
T:               ----------------------TGTGGTGTGGTGTCaggGTGCT------
R:         23   T23102010303001003123203111011110111201201132022301    44        
--
>404_3590_1097_F3	ENSMUST00000113126	-	2596	2623	16	43	50	166	x3C2x17x2x3	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                X|| ||X||||||||||||||||X|X||
T:               ---------------cAGCGGtGTGGTGTGGTGTCAGGgTgCT-------
R:         16   T23120103031310231233031110111101112120110322023331    43        
--
>404_4116_480_F3	ENSMUST00000113126	-	2596	2620	21	45	50	170	11x2x5x3x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|X||||X||X|||
T:               --------------------AGGTGTGGTGTgGtGTCAgGGtGCT-----
R:         21   T02130201030310112312320111101112021121100013233120    45        
--
>405_379_2821_F3	ENSMUST00000113126	-	2602	2627	13	38	50	180	2x5x3x12x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                             ||X||||X||X|||||||||||X|||
T:               ------------TAgACAGaGGtGTGGTGTGGTGtCAG------------
R:         13   T23302010303103321123203111011110112212203012130112    38        
--
>405_1449_2718_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T13330201030313312312320111101112011121320303002312    38        
--
>405_1834_4389_F3	ENSMUST00000113126	-	2599	2627	13	41	50	170	2x2x3x3x9x2x8	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                             ||X|X||X||X||||||||X|X|||||||
T:               ------------TAgAcAGaGGtGTGGTGTGgTgTCAGGGT---------
R:         13   T23102010303303322123203111011112131212001333332230    41        
--
>405_1911_4988_F3	ENSMUST00000113126	-	2220	2250	8	38	50	176	4x6x1T1x1x14x3	
G:       2250    GGGGAGGACGCACGCACGCACGCACCCACGCATGCACTTGAGCCCATTCA    2220      
                        ||||X|||||X |XX|||||||||||||X||
T:               -------ACGCaCGCACgTAcgCACCCACGCATGCaCT------------
R:          8   T32233022133013311213213110011331313312201222302230    38        
--
>405_2145_3579_F3	ENSMUST00000113126	-	2596	2620	20	44	50	210	15x6x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||||||||||||||X|||||X|||
T:               -------------------AGGTGTGGTGTGGTGtCAGGGtGCT------
R:         20   T01002013303011313223201111011110113212000132212332    44        
--
>405_2188_1024_F3	ENSMUST00000113126	-	2441	2467	10	36	50	170	13x4x3x2x2x3	
G:       2467    AAGGGTCATCAGCGTCTGGCTCCACAGCAGGCACCGGACGTCTACCTCCC    2441      
                          |||||||||||||X|||X||X|X|X||
T:               ---------CAGCGTCTGGCTCcACAgCAgGcAcCG--------------
R:         10   T23122010301233122103223111331101120312202010032103    36        
--
>405_2455_1783_F3	ENSMUST00000113126	-	2597	2622	18	43	50	180	2x3x14x4x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                  ||X||X|||||||||||||X|||X||
T:               -----------------AGaGGtGTGGTGTGGTGTCaGGGtGC-------
R:         18   T03103010201033000023203111011110111202003133321101    43        
--
>405_2474_1948_F3	ENSMUST00000113126	-	2595	2620	20	45	50	200	3x11x8x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                    |||X||||||||||X|||||||X|||
T:               -------------------AGGtGTGGTGTGGTgTCAGGGTgCTG-----
R:         20   T23302010301001302123203111011110101212001232123003    45        
--
>405_2560_4039_F3	ENSMUST00000113126	+	2591	2622	9	40	50	186	1x5x1x3x1x2T18	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                         |X||||XX||XX| ||||||||||||||||||
T:               --------TaCCCAgcACccTTACACCACACCACACCTCT----------
R:          9   T13102013321001001123203111011110111102220223022302    40        
--
>405_2715_1043_F3	ENSMUST00000113126	-	2600	2622	19	41	50	170	2x11x7x3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X||||||X||
T:               ------------------AGaGGTGTGGTGTgGTGTCAgGG---------
R:         19   T02330201030320312332320111101112011121100312322333    41        
--
>405_4237_882_F3	ENSMUST00000113126	-	2598	2623	18	43	50	186	3x11x7C4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                  |||X||||||||||X|||||| ||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCACGGTG-------
R:         18   T02330201030313112312320111101112011121130112202103    43        
--
>406_1212_2077_F3	ENSMUST00000113126	+	2593	2620	11	38	50	166	4x2x2x1x2T16	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                           ||||X|X|XX| ||||||||||||||||
T:               ----------CCCAgCaCccTTACACCACACCACACCT------------
R:         11   T23302010322001030123203111011110111102303323211120    38        
--
>406_1278_3085_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23302010322301002123203111011110111202303300333313    36        
--
>406_1493_2963_F3	ENSMUST00000113126	-	2071	2099	8	36	50	170	1x3x5x1x2x13x4	
G:       2099    TCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTTG    2071      
                        |X||X||||XX|X||||||||||||X|||
T:               -------CtGAgAGCTccAaCCACAGCTTTTGtAAT--------------
R:          8   T01030321112322320111101112320001030301100313112220    36        
--
>406_1963_1442_F3	ENSMUST00000113126	-	2602	2620	19	37	50	170	3x16	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                   |||X|||||||||||||||
T:               ------------------AGGtGTGGTGTGGTGTCAG-------------
R:         19   T02020103031310231232001110111101112122030103001101    37        
--
>406_2726_2189_F3	ENSMUST00000113126	-	2595	2617	23	45	50	170	16x2x1x4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                       ||||||||||||||||X|XX|||
T:               ----------------------TGTGGTGTGGTGTCAGgGtgCTG-----
R:         23   T03302010300000300113303111011110111212300332121132    45        
--
>406_3103_1986_F3	ENSMUST00000113126	-	2597	2623	14	40	50	170	6x10x2x1x3x5	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                              ||||||X|||||||||X|XX||X||||
T:               -------------CAGAGGtGTGGTGTGGtGtcAGgGTGC----------
R:         14   T22010301131323122203111011110310012201133313230221    40        
--
>406_3171_1267_F3	ENSMUST00000113126	-	82	116	10	44	50	170	2x2x2x3x2x2x11x2x6x3	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    82        
                          ||X|X|X||X|X|X||||||||||X|X|||||X||
T:               ---------GTcAtCaCTgGtCaCGTGTGACTGtCgAATATgAG------
R:         10   T23320103031311231230223131111212102020333322222101    44        
--
>406_3292_3291_F3	ENSMUST00000113126	-	85	125	1	41	50	190	1x5x2x1x2x2x2x3x2x2x14x5	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    85        
                 |X||||X|XX|X|X|X||X|X|X|||||||||||||X||||
T:               CaTTCCtGtgTcAtCaCTgGtCaCGTGTGACTGTCGaATAT---------
R:          1   T23302011031311231230222131111212112310333320203231    41        
--
>406_3548_2405_F3	ENSMUST00000113126	-	2602	2625	14	37	50	180	2x3x3x16	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X|||||||||||||||
T:               -------------GAcAGaGGtGTGGTGTGGTGTCAG-------------
R:         14   T23320103031313231232031110111101112123210101320322    37        
--
>407_48_1150_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	1x3x3x11x7	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                |X||X||X||||||||||X||||||
T:               ---------------AcAGaGGtGTGGTGTGGTgTCAGGG----------
R:         16   T23302010300301033123203111011110131212003330330310    40        
--
>407_726_4921_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T30230201030310112332320111101112011121233022003110    39        
--
>407_1051_251_F3	ENSMUST00000113126	-	2595	2623	16	44	50	170	3x3x1x9x2x7x4	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                                |||X||XX||||||||X|X||||||X|||
T:               ---------------CAGaGGtgTGGTGTGGtGtCAGGGTgCTG------
R:         16   T20020103031311231232030110111103132120013321132203    44        
--
>407_1394_1964_F3	ENSMUST00000113126	-	2599	2626	15	42	50	180	1x5x11x4x4x3	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                               |X||||X||||||||||X|||X|||X||
T:               --------------AgACAGaGGTGTGGTGTgGTGtCAGgGT--------
R:         15   T02130201030310112112320111101112011021220100213033    42        
--
>407_1727_4881_F3	ENSMUST00000113126	+	2591	2625	9	43	50	182	3x1A4x4T2x3x2x14	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                         |||X ||||X||| ||X||X|X|||||||||||||
T:               --------TACcAAGCAcCCTTACaCCaCaCCACACCTCTGTC-------
R:          9   T10120103031310231200203101021210111102221123321022    43        
--
>407_3251_921_F3	ENSMUST00000113126	-	2600	2625	14	39	50	180	2x3x3x8x10	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                              ||X||X||X|||||||X|||||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGGG-----------
R:         14   T13001103031310231232031110111201112120033303030221    39        
--
>407_3764_4984_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121213310232022    39        
--
>408_1210_260_F3	ENSMUST00000113126	-	2594	2623	18	47	50	180	3x11x2x4x4x1x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                  |||X||||||||||X|X|||X|||XX||||
T:               -----------------CAGaGGTGTGGTGTgGtGTCaGGGtgCTGG---
R:         18   T02330201030313112312320111101112031120200233210120    47        
--
>408_1745_907_F3	ENSMUST00000113126	-	2605	2626	14	35	50	180	1x5x16	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              |X||||X|||||||||||||||
T:               -------------AgACAGaGGTGTGGTGTGGTGT---------------
R:         14   T13302010321331321123201111011110111000320223110123    35        
--
>408_1789_1285_F3	ENSMUST00000113126	+	2589	2622	7	40	50	186	2x3x2x4x2x2T12x6	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                       ||X||X|X|||X|X| ||||||||||||X|||||
T:               ------GGtACcCaGCAcCcTTACACCACACCACaCCTCT----------
R:          7   T03302210331303231303203111011110113102220233203220    40        
--
>408_1897_3369_F3	ENSMUST00000113126	-	2599	2622	19	42	50	180	x13x6x5	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                   X||||||||||||X|||||X||||
T:               ------------------aGAGGTGTGGTGTgGTGTCaGGGT--------
R:         19   T30230201030310112332220111101112011120200122310232    42        
--
>408_1986_3904_F3	ENSMUST00000113126	-	2601	2625	24	48	50	170	2x3x3x10x7	
G:       2625    GAAAGAAAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTG    2601      
                                        ||X||X||X|||||||||X||||||
T:               -----------------------GAcAGaGGtGTGGTGTGGtGTCAGG--
R:         24   T11010112123302010303131123123203111011110211212033    48        
--
>408_2543_4737_F3	ENSMUST00000113126	-	2606	2626	14	34	50	170	1x5x15	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                              |X||||X||||||||||||||
T:               -------------AgACAGaGGTGTGGTGTGGTG----------------
R:         14   T23102210320201021123201111011110113202120313321232    34        
--
>408_3750_4748_F3	ENSMUST00000113126	-	2596	2622	19	45	50	170	13x5x1x3x1x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                   |||||||||||||X||||XX||XX|||
T:               ------------------AGAGGTGTGGTGTgGTGTcaGGgtGCT-----
R:         19   T02330201330310312332220111101112011110203313231012    45        
--
>408_3890_2560_F3	ENSMUST00000113126	-	2596	2620	21	45	50	170	11x6x2x2x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||X|X|X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGtGCT-----
R:         21   T02330201030310112332320111101112011120230313220222    45        
--
>409_96_1727_F3	ENSMUST00000113126	+	2594	2622	12	40	50	190	3x4x1x2x14x5	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||X|||XX|X|||||||||||||X||||
T:               -----------CCAgCACccTgACACCACACCACAcCTCT----------
R:         12   T23302010303301131123202111011110111202220233321012    40        
--
>409_1091_204_F3	ENSMUST00000113126	-	720	750	5	35	50	170	8x2x6x5x1x1x3x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                     ||||||||X|X|||||X||||XXX||X||||
T:               ----CAATATGCaGgCAGTAgGCACtgaCAtTGTC---------------
R:          5   T00310103331302231213303111331110112222313013300112    35        
--
>409_1766_1648_F3	ENSMUST00000113126	-	2601	2624	16	39	50	186	4C2x17	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                |||| ||X||||||||||||||||
T:               ---------------ACAGCGGtGTGGTGTGGTGTCAGG-----------
R:         16   T23102010300300001123303111011110111212021333321012    39        
--
>409_2176_2727_F3	ENSMUST00000113126	-	2602	2629	11	38	50	186	6x1x1T10x9	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||||||XX ||||||||||X||||||||
T:               ----------TGTAGAcaTAGGTGTGGTGtGGTGTCAG------------
R:         11   T01030010003113223233201111011210111212330313100322    38        
--
>409_2924_2412_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x7x10	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X||||||X|||||||||
T:               ----------------CAGaGGtGTGGTGtGGTGTCAGG-----------
R:         17   T23302013300001020123203111011310111212030033113203    39        
--
>410_492_3681_F3	ENSMUST00000113126	-	2596	2620	21	45	50	170	11x6x2x3x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||X|X||X||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGTgCT-----
R:         21   T02330201030310002332320111101112011120210103222133    45        
--
>410_2972_693_F3	ENSMUST00000113126	-	2601	2625	14	38	50	170	2x3x3x10x7	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                              ||X||X||X|||||||||X||||||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAGG------------
R:         14   T13020103031313231232031110111102112120203103330220    38        
--
>410_3347_4156_F3	ENSMUST00000113126	+	2834	2859	2	27	50	166	9x2x6x5C3	
G:       2834    CACCCTTTTCTAATGTCTTCCATTCCTATCTCCCCCCAAAAGAAATATTA    2859      
                  |||||||||X|X|||||X|||| |||
T:               -ACCCTTTTCtAaTGTCTtCCATCCCT-----------------------
R:          2   T03100200020333112212013200213312213032322133100222    27        
--
>410_3850_724_F3	ENSMUST00000113126	-	2609	2632	24	47	50	186	6C3x14	
G:       2632    TTCAGTGGAAAGAAAGAAATTCTTGGTGTAGACAGAGGTGTGGTGTGTCA    2609      
                                        |||||| |||X|||||||||||||
T:               -----------------------TGGTGTCGACaGAGGTGTGGTGTG---
R:         24   T22220103031310231232033110111232132220111101111221    47        
--
>411_79_2509_F3	ENSMUST00000113126	+	1772	1789	27	44	50	160	2x16	
G:       1772    AGGGGTGCGATTGGACTGAAACTTGGCAATGGTTCTAAGTAGCAATGCCC    1789      
                                           ||X|||||||||||||||
T:               --------------------------CAaTGGTTCTAAGTAGCA------
R:         27   T1302010003131123123320313121131010223021323122302.    44        
--
>411_1037_3046_F3	ENSMUST00000113126	-	722	750	5	33	50	190	3x1x5x12x2x6	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    722       
                     |||XX||||X|||||||||||X|X|||||
T:               ----CAAtaTGCAgGCAGTAGGCACtGaCATTG-----------------
R:          5   T2312010123131303121320311111113013220112310231313.    33        
--
>411_1992_152_F3	ENSMUST00000113126	+	790	822	10	42	50	168	2x3x2G4x1C1A17	
G:        790    TTCCGCCACTGGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAGTACT    822       
                          ||X||X| ||||X | |||||||||||||||||
T:               ---------TGgATtCGAATGaCCACATTCATAAGTTTGGCT--------
R:         10   T1223030313112332320311101113021330210010322313103.    42        
--
>412_1548_4266_F3	ENSMUST00000113126	+	2121	2155	15	49	50	176	x3x3C2x3x4x3x6x10	
G:       2121    GTTTAGGGCTTAGCCAGTAGTTTAACTGTGCCATTTGTTTAAATAAGTGA    2155      
                               X||X|| ||X||X|||X||X|||||X|||||||||
T:               --------------cAGtAGCTTaACtGTGcCAtTTGTTtAAATAAGTG-
R:         15   T02330201030310312332320101011110110011013003302110    49        
--
>412_1918_3801_F3	ENSMUST00000113126	+	2599	2625	17	43	50	176	2x1x3x13G7	
G:       2599    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                 ||XX||X|||||||||||| |||||||
T:               ----------------ACccTGaCACCACACCACAGCTCTGTC-------
R:         17   T23102010303102333113213111011110111232221120030030    43        
--
>412_2846_4826_F3	ENSMUST00000113126	+	2230	2265	4	39	50	164	3x2A3T3x2A1C10x8	
G:       2230    GCGTGGGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTAGCCTTCTAAGGCC    2265      
                    |||X| ||| |||X| | ||||||||||X|||||||
T:               ---TGGgTACGTTCGTgCATCCGTGCGTGCGtGCGTAGC-----------
R:          4   T23101031313102312313203113311330133132313210322232    39        
--
>412_3050_1197_F3	ENSMUST00000113126	-	2594	2625	14	45	50	186	2x3x3x1x7x11A4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                              ||X||X||XX||||||X|||||||||| ||||
T:               -------------GAcAGaGGtgTGGTGTgGTGTCAGGGTACTGG-----
R:         14   T21120103031313231232032110111201112120013121022020    45        
--
>412_3266_4408_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T13030201030310312332320111101112011121230330021230    39        
--
>412_3360_1267_F3	ENSMUST00000113126	-	2601	2621	22	42	50	170	x17x4	
G:       2621    AAGAAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                      X||||||||||||||||X|||
T:               ---------------------gAGGTGTGGTGTGGTGTcAGG--------
R:         22   T10121031012012312330312201111011110111312012023132    42        
--
>412_4189_2920_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02130201030310312332320111101112011121230011322202    39        
--
>412_4222_1640_F3	ENSMUST00000113126	-	2597	2626	15	44	50	166	1x2T2x11x8x2x3	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                               |X| ||X||||||||||X|||||||X|X||
T:               --------------AgATAGaGGTGTGGTGTgGTGTCAGgGtGC------
R:         15   T02130201030310112332320111101112011121220313312201    44        
--
>413_391_2276_F3	ENSMUST00000113126	-	2594	2620	21	47	50	170	11x5x3x2x3x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                     |||||||||||X||||X||X|X||X||
T:               --------------------AGGTGTGGTGTgGTGTcAGgGtGCtGG---
R:         21   T02130201030310312332320111101112011111230313310211    47        
--
>413_424_153_F3	ENSMUST00000113126	-	2603	2631	9	37	50	176	4x2x1T3x3x15	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                         ||||X|X |||X||X||||||||||||||
T:               --------GGTGtAgTCAGaGGtGTGGTGTGGTGTCA-------------
R:          9   T23301013001103012123203111011110111210031330212012    37        
--
>413_1665_2782_F3	ENSMUST00000113126	-	2596	2624	16	44	50	190	4x3x14x2x3x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                ||||X||X|||||||||||||X|X||X||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCaGgGTgCT------
R:         16   T23102010300003001123203111011110111202301332203101    44        
--
>413_1867_1196_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T13103000330313012123203111011110111223330332301332    36        
--
>413_2032_3678_F3	ENSMUST00000113126	+	2598	2622	16	40	50	170	3x1x2x1x18	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                |||XX|XX|||||||||||||||||
T:               ---------------CACccTgaCACCACACCACACCTCT----------
R:         16   T23102010300301001123233111011110111102220300333111    40        
--
>413_2237_812_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302010321331020123203111011110111212303020112310    38        
--
>413_2410_4362_F3	ENSMUST00000113126	-	2593	2619	20	46	50	176	2x8x8x2C6	
G:       2619    AATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGTGCTGGGAATC    2593      
                                    ||X|||||||X|||||||X| ||||||
T:               -------------------GGtGTGGTGTgGTGTCAGgGCGCTGGG----
R:         20   T12120103032311231230031110111201112123033321000321    46        
--
>413_2587_1902_F3	ENSMUST00000113126	-	2601	2620	19	38	50	160	3x8x9	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |||X|||||||X||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGG------------
R:         19   T31020103031310231232031110111201112120303303302332    38        
--
>413_2635_3207_F3	ENSMUST00000113126	-	2071	2099	7	35	50	170	1x4x4x1x2x5x12	
G:       2099    CTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTTGC    2071      
                       |X|||X|||XX|X||||X|||||||||||
T:               ------CtGAGaGCTccAaCCACaGCTTTTGTAAT---------------
R:          7   T10203131122123203111011223200011303030020231002001    35        
--
>413_2636_3152_F3	ENSMUST00000113126	-	2601	2617	23	39	50	170	17	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                       |||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAGG-----------
R:         23   T23302010303101030023223111011110111212031302320020    39        
--
>413_2867_1085_F3	ENSMUST00000113126	-	2595	2625	15	45	50	176	3x2x11x3x2x1C8	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               |||X|X||||||||||X||X|X ||||||||
T:               --------------GACaGaGGTGTGGTGTgGTgTcCGGGTGCTG-----
R:         15   T23102013300301021323201111011130101103001132123122    45        
--
>413_2945_1487_F3	ENSMUST00000113126	-	2601	2623	17	39	50	190	3x3x17	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X||||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAGG-----------
R:         17   T23302001300011033123203111011110111212023333220202    39        
--
>413_3352_1310_F3	ENSMUST00000113126	-	2601	2624	16	39	50	166	x4C2x17	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                X||| ||X||||||||||||||||
T:               ---------------aCAGCGGtGTGGTGTGGTGTCAGG-----------
R:         16   T23102010301001001123303111011110111212013233312021    39        
--
>413_3415_728_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02330201030310112332320111101112011121220301322320    39        
--
>413_3815_4043_F3	ENSMUST00000113126	-	2596	2625	15	44	50	186	5C2x12x2x5x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               ||||| ||X|||||||||||X|X||||X||
T:               --------------GACAGCGGtGTGGTGTGGTGtCaGGGTgCT------
R:         15   T23302010302331021123302111011110112232001332213022    44        
--
>413_3875_4037_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	5x5x11x1x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||||X||||||||||XX|||
T:               --------------GACAGaGGTGtGGTGTGGTGTcaGGG----------
R:         15   T23302010302001021123201131011110111002003323333011    40        
--
>414_254_2347_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	3x8x10	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||X|||||||X|||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGG-----------
R:         19   T13020103031310231232031110111201112120003302303112    39        
--
>414_1528_1666_F3	ENSMUST00000113126	-	2591	2620	20	49	50	172	x3x18C1x3C3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                                    X||X||||||||||||||||| |X|| |||
T:               -------------------aGGtGTGGTGTGGTGTCAGGGCGcTGCGTA-
R:         20   T03101010301000300223203111011110111212003302133132    49        
--
>414_1529_2893_F3	ENSMUST00000113126	-	2599	2626	14	41	50	180	1x2x3x3x12x7	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                              |X|X||X||X|||||||||||X||||||
T:               -------------AgAcAGaGGtGTGGTGTGGTGtCAGGGT---------
R:         14   T30102010300331020123203111011110110212001312020003    41        
--
>414_1549_2585_F3	ENSMUST00000113126	+	2595	2628	13	46	50	180	5x5x2x10x1x2x1x4x4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                             |||||X||||X|X|||||||||XX|XX|||X|||
T:               ------------CAGCAcCCTGaCaCCACACCACacCtcTGTcTAC----
R:         13   T11220103031311231200213101011110112001021102312322    46        
--
>414_1809_3396_F3	ENSMUST00000113126	-	2594	2625	16	47	50	186	2x3x17x1x1x4T3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                ||X||X||||||||||||||||XXX||| |||
T:               ---------------GAcAGaGGTGTGGTGTGGTGTCaggGTGTTGG---
R:         16   T31030201030310312312320111101111011120030111010322    47        
--
>414_2007_2234_F3	ENSMUST00000113126	-	83	100	26	43	50	160	5x13	
G:        100    CTCTGTATTTGAATTTTTAGCAATTTGTGACTGTCGAATATGAGAAATTG    83        
                                          |||||X||||||||||||
T:               -------------------------TGTGAcTGTCGAATATGA-------
R:         26   T10320103031310231232032110111202112320333123300312    43        
--
>414_2042_1219_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x14x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||X|||
T:               -------------------AGGtGTGGTGTGGTGTCaGGG----------
R:         20   T21302010320303020113203111011110111202002032201311    40        
--
>414_2073_3412_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23102010302001331123203111011110111202320323132122    36        
--
>414_2073_3412_F3	ENSMUST00000113126	+	2593	2620	11	38	50	166	4x4x1x2T13x3	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                           ||||X|||XX| |||||||||||||X||
T:               ----------CCCAgCACccTTACACCACACCACAcCT------------
R:         11   T23102010302001331123203111011110111202320323132122    38        
--
>414_2366_1337_F3	ENSMUST00000113126	-	2602	2625	15	38	50	200	5x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T23302010300003021123203111011110111212231323212012    38        
--
>414_2421_1505_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x11x7	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X||||||||||X||||||
T:               -------------------AGGtGTGGTGTGGTgTCAGGG----------
R:         20   T01002013300313123213203111011110131212000303020323    40        
--
>414_2473_3134_F3	ENSMUST00000113126	-	2598	2627	13	42	50	172	1x2T3x3x16A3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                             |X| |||X||X||||||||||||||| |||
T:               ------------TaGTCAGaGGtGTGGTGTGGTGTCAGAGTG--------
R:         13   T23302010321231212123203111011110111212221101231032    42        
--
>414_2685_2842_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	x5x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               X||||X|||||||||||||||
T:               --------------gACAGaGGTGTGGTGTGGTGT---------------
R:         15   T23302010303201021123201111011110111020133130300320    35        
--
>414_2769_3427_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	14x1x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  ||||||||||||||XX||||||
T:               -----------------CAGAGGTGTGGTGTggTGTCAG-----------
R:         18   T02130201230310212312220111101112111121220203223222    39        
--
>414_3758_3838_F3	ENSMUST00000113126	-	2603	2623	16	36	50	170	3x3x15	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                                |||X||X||||||||||||||
T:               ---------------CAGaGGtGTGGTGTGGTGTCA--------------
R:         16   T31020103031311231232031110111101112103230223330022    36        
--
>415_1319_2735_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	3x2x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||X|X||X|||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTC--------------
R:         15   T2310201030200302122320311101111011120232023222320.    36        
--
>415_1773_2606_F3	ENSMUST00000113126	-	2600	2627	14	41	50	180	2x3x2x11x4x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X||X|X||||||||||X|||X|||||
T:               -------------TAgACaGaGGTGTGGTGTgGTGtCAGGG---------
R:         14   T0233020123033031213202011110111201102120030221222.    41        
--
>415_1930_22_F3	ENSMUST00000113126	-	2598	2623	14	39	50	180	3x3x9x7x4	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATCCC    2598      
                              |||X||X||||||||X||||||X|||
T:               -------------CAGaGGtGTGGTGTGgTGTCAGgGTG-----------
R:         14   T2201030313112312320311101111111121220112232133200.    39        
--
>415_2916_1757_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x14x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGG-----------
R:         17   T2330201030100100012320311101111011120203320323331.    39        
--
>415_3081_3059_F3	ENSMUST00000113126	-	2603	2627	14	38	50	176	2x2T15x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X| |||||||||||||||X||||
T:               -------------TAgATAGAGGTGTGGTGTGGtGTCA------------
R:         14   T0213020123031030233222011110111100112112000231232.    38        
--
>415_3136_1383_F3	ENSMUST00000113126	-	84	114	12	42	50	170	2x2x3x2x2x13x4x3	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATATGTGAAATTG    84        
                            ||X|X||X|X|X||||||||||||X|||X||
T:               -----------CAtCaCTgGtCaCGTGTGACTGTCgAATaTG--------
R:         12   T0330221203131023123022013111121211212031311330320.    42        
--
>415_3328_757_F3	ENSMUST00000113126	-	86	109	22	45	50	160	3x5x2x11x3	
G:        109    GCTTGCTCTGTATTTGAATTTCTGGTCACGTGTGACTGTCGAATATTTGA    86        
                                      |||X||||X|X||||||||||X||
T:               ---------------------CTGgTCACgTgTGACTGTCGAaTA-----
R:         22   T0013303111121223022303211121101311212112322331130.    45        
--
>415_3431_1867_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T0013303111123223201111011123200311301330010331222.    36        
--
>415_3520_3769_F3	ENSMUST00000113126	-	2597	2622	19	44	50	180	2x11x6x4x3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                   ||X||||||||||X|||||X|||X||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGGGtGC------
R:         19   T0233020111231011233232011110111201112220031300003.    44        
--
>415_3729_611_F3	ENSMUST00000113126	-	2596	2626	15	45	50	162	1x2T2x11x7C2x4	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                               |X| ||X||||||||||X|||||| ||X|||
T:               --------------AgATAGaGGTGTGGTGTgGTGTCACGGtGCT-----
R:         15   T0213020103031011233232011110111201112113031320011.    45        
--
>416_729_851_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T103020103032013211232031110111101110000223333010.0    35        
--
>416_898_2826_F3	ENSMUST00000113126	-	2603	2623	20	40	50	170	3x3x15	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAA    2603      
                                    |||X||X||||||||||||||
T:               -------------------CAGaGGtGTGGTGTGGTGTCA----------
R:         20   T123233020103031310331232031110111101112132303100.2    40        
--
>416_1169_2394_F3	ENSMUST00000113126	+	2605	2627	23	45	50	176	16x1C5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       ||||||||||||||||X |||||
T:               ----------------------ACACCACACCACACCTcCGTCTA-----
R:         23   T231002100023233311232031110111101111021031223223.0    45        
--
>416_1212_3244_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T231020123000013002233031110111101111022231132133.3    40        
--
>416_1536_4041_F3	ENSMUST00000113126	-	2602	2627	14	39	50	166	2x2T13x4x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X| |||||||||||||X|||X|||
T:               -------------TAgATAGAGGTGTGGTGTgGTGtCAG-----------
R:         14   T313302010303103023322201111011120110212332023013.0    39        
--
>416_1592_4103_F3	ENSMUST00000113126	+	2601	2623	19	41	50	176	1x15T6	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                   |X|||||||||||||| ||||||
T:               ------------------CcTGACACCACACCACTCCTCTG---------
R:         19   T233020103123313201232121110111101122022212332232.2    41        
--
>416_1834_4370_F3	ENSMUST00000113126	+	2594	2621	12	39	50	186	3x1x4x2T17	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            |||XX|||X| |||||||||||||||||
T:               -----------CCAgcACCcTTACACCACACCACACCTC-----------
R:         12   T203020103003013011032031110111101111022032101333.2    39        
--
>416_1895_1215_F3	ENSMUST00000113126	-	2606	2624	16	34	50	170	4x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                                ||||X||||||||||||||
T:               ---------------ACAGaGGTGTGGTGTGGTG----------------
R:         16   T231020133000000011232011110111101102003331300221.3    34        
--
>416_2255_2000_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	2x3x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||||||||||||||||
T:               --------------GAcAGaGGTGTGGTGTGGTGTC--------------
R:         15   T231020103000313221232011110111101112033233122213.2    36        
--
>416_3034_1263_F3	ENSMUST00000113126	+	2592	2616	10	34	50	176	2x7G2x13	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                          ||X|||||| ||X||||||||||||
T:               ---------ACcCAGCACGCTgACACCACACCAC----------------
R:         10   T201020103011012311332021110111101133120120330322.3    34        
--
>416_3343_86_F3	ENSMUST00000113126	+	784	802	4	22	50	170	8x11	
G:        784    TTCCGCCACTGGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAGTACT    802       
                    ||||||||X||||||||||
T:               ---CGCCACTGgATTCCAATGA----------------------------
R:          4   T220233011212230201031231121212320311111112312233.2    22        
--
>416_3417_2904_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T233020103000010213232031110111101111022232333232.1    40        
--
>416_4106_460_F3	ENSMUST00000113126	+	2605	2632	23	50	50	190	16x1x1x6x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                       ||||||||||||||||XXX|||||X|||
T:               ----------------------ACACCACACCACACCTctgTCTACaCCA
R:         23   T121030113112023122232331110111101111023021223131.1    50        
--
>417_714_530_F3	ENSMUST00000113126	-	2596	2622	18	44	50	190	2x3x11x7x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                  ||X||X||||||||||X||||||X|||
T:               -----------------AGaGGtGTGGTGTGGTgTCAGGGtGCT------
R:         18   T23102013301201001323203111011110121212003132213331    44        
--
>417_1173_2213_F3	ENSMUST00000113126	-	2607	2627	13	33	50	170	3x4x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTACTGTTTGAAAAAAAAT    2607      
                             |||X|||X|||||||||||||
T:               ------------TAGaCAGaGGTGTGGTGTGGT-----------------
R:         13   T23302013302303231123201111011110130302120233030122    33        
--
>417_1866_448_F3	ENSMUST00000113126	-	2596	2623	16	43	50	186	3x3x8x10C3	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                |||X||X|||||||X||||||||| |||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGGGCGCT-------
R:         16   T23302013031311231232031110111201112120033323021121    43        
--
>417_2021_989_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	2x3x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               ||X||X||X|||||||||||||X|||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23102010301003322123203111011110111202000023232002    40        
--
>417_3092_856_F3	ENSMUST00000113126	+	2592	2632	10	50	50	188	2x2T1x4G1T15x4x1x2x6	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                          ||X| |X||| | |||||||||||||||X|||XX|X|||||
T:               ---------ACcCTGcACCGTTACACCACACCACACCtCTGtcTaCACCA
R:         10   T31130123211202121103103111011110111100221332211101    50        
--
>418_1675_2419_F3	ENSMUST00000113126	-	2596	2623	18	45	50	180	3x3x8x8x3x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||X|||||||X|||||||X||X||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGgGTgCT-----
R:         18   T10030201030310112012320311101112011121220103223210    45        
--
>418_2370_2686_F3	ENSMUST00000113126	-	2602	2627	22	47	50	180	2x2x3x3x16	
G:       2627    GAAAGAAAGAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTG    2602      
                                      ||X|X||X||X|||||||||||||||
T:               ---------------------TAgAcAGaGGtGTGGTGTGGTGTCAG---
R:         22   T30320302233302010003133323123203111011110111212320    47        
--
>418_3329_13_F3	ENSMUST00000113126	-	82	110	16	44	50	170	3x2x2x15x1x2x4	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    82        
                                |||X|X|X||||||||||||||XX|X|||
T:               ---------------ACTgGtCaCGTGTGACTGTCGAatAtGAG------
R:         16   T02020103031310231230222131111212112322230122201011    44        
--
>418_3748_4416_F3	ENSMUST00000113126	+	2604	2626	22	44	50	170	1x12x6x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                      |X|||||||||||X|||||X|||
T:               ---------------------GaCACCACACCACaCCTCTgTCT------
R:         22   T23302010300001312323003111011110113102223122132010    44        
--
>419_53_226_F3	ENSMUST00000113126	-	2600	2620	17	37	50	170	3x4x14	
G:       2620    TTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCC    2600      
                                 |||X|||X|||||||||||||
T:               ----------------AGGtGTGgTGTGGTGTCAGGG-------------
R:         17   T00010303131223323203111311110111212003023033112010    37        
--
>419_496_4675_F3	ENSMUST00000113126	+	2592	2622	10	40	50	176	2x3x1x3x1x2T18	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                          ||X||XX||XX| ||||||||||||||||||
T:               ---------ACcCAgcACccTTACACCACACCACACCTCT----------
R:         10   T13102010301301001123203111011110111102222033323010    40        
--
>419_830_2147_F3	ENSMUST00000113126	-	2600	2625	21	46	50	200	16x4x2x4	
G:       2625    AGAAAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAA    2600      
                                     ||||||||||||||||X|||X|X|||
T:               --------------------GACAGAGGTGTGGTGTgGTGtCaGGG----
R:         21   T00330111002013300211121122201111011120112232002102    46        
--
>419_1325_2282_F3	ENSMUST00000113126	-	2596	2620	20	44	50	210	17x2x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                    |||||||||||||||||X|X|||||
T:               -------------------AGGTGTGGTGTGGTGTCaGgGTGCT------
R:         20   T32101313303003330123201111011110111202201132220331    44        
--
>419_1453_3308_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	x17x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    X||||||||||||||||X|||
T:               -------------------aGGTGTGGTGTGGTGTCaGGG----------
R:         20   T23321032313112312013201111011110111232003322222012    40        
--
>419_1964_3105_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T13330201030310112232320111101112011121213333303230    39        
--
>419_3045_1531_F3	ENSMUST00000113126	-	914	938	23	47	50	170	8x2x7x4x4	
G:        938    TTGAACAGGCAGATTACAAAAGTGTGTTGTCTACTTGGATAAGGGAGTGT    914       
                                       ||||||||X|X||||||X|||X|||
T:               ----------------------TGTGTTGTcTaCTTGGAtAAGgGAG---
R:         23   T02130201030310112332323111101112012010203022022333    47        
--
>419_3361_3052_F3	ENSMUST00000113126	+	2591	2626	9	44	50	166	1x5x1x3x1x2T11x2x3x6	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                         |X||||XX||XX| |||||||||||X|X||X|||||
T:               --------TaCCCAgcACccTTACACCACACCAcAcCTcTGTCT------
R:          9   T23102010301001001123203111011110121302021122120033    44        
--
>419_3905_2609_F3	ENSMUST00000113126	-	2590	2628	12	50	50	182	4C1x2x15x2C1x4x2x2x4	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                            |||| |X|X||||||||||||||X| |X|||X|X|X|||
T:               -----------GTAGCCaGaGGTGTGGTGTGGTGtCCGgGTGcTgGgTAC
R:         12   T01002013301213230223201111011110113203201102202131    50        
--
>419_3974_1206_F3	ENSMUST00000113126	-	1167	1204	13	50	50	200	1x4x3x3x1x2x4x1x12x7	
G:       1204    AGGCCACCTCCTAATGACTTGTAATGGTGGCTGCTAAGCATATCCTGTAC    1167      
                             |X|||X||X||XX|X|||XX|||||||||||X||||||
T:               ------------AaTGAcTTgTAatGgTGGctGCTAAGCATATcCTGTAC
R:         13   T33101030313102312320313111111020132302313331021131    50        
--
>419_4094_1958_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23102013300301030123203111011110111233203101232102    36        
--
>420_419_2600_F3	ENSMUST00000113126	-	2597	2625	12	40	50	176	2x3x3x8x8T4	
G:       2625    TTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                            ||X||X||X|||||||X||||||| ||||
T:               -----------GAcAGaGGtGTGGTGTgGTGTCAGTGTGC----------
R:         12   T22010301131123123203111011120111212111133020322133    40        
--
>420_720_474_F3	ENSMUST00000113126	-	2604	2622	19	37	50	170	2x17	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                   ||X||||||||||||||||
T:               ------------------AGaGGTGTGGTGTGGTGTC-------------
R:         19   T02330201130310112332320111101111011123220220320110    37        
--
>420_1458_4017_F3	ENSMUST00000113126	-	2599	2623	14	38	50	170	3x3x12x4x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                              |||X||X|||||||||||X|||X||
T:               -------------CAGaGGtGTGGTGTGGTGtCAGgGT------------
R:         14   T22010303131123123203111011110113212301030321322130    38        
--
>420_1806_4103_F3	ENSMUST00000113126	+	2602	2622	20	40	50	190	x21	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    X||||||||||||||||||||
T:               -------------------cTGACACCACACCACACCTCT----------
R:         20   T23302013003303010223212111011110111102223002312233    40        
--
>420_2018_1997_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	3x3x3x13x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |||X||X||X||||||||||||X||
T:               -------------AGAcAGaGGtGTGGTGTGGTGTcAG------------
R:         14   T23302010121231220123203111011110111012203310030222    38        
--
>420_2131_4472_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x14x2x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||||X|X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGgGT---------
R:         17   T23102010303303023123203111011110111202201021312330    41        
--
>420_2274_748_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x5x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X||||X||||
T:               --------------------AGGTGTGGTGTgGTGTcAGGG---------
R:         21   T02330201030310112332320111101112011111200203302000    41        
--
>420_2447_608_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x14x1x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X|||||||||||||XX||||
T:               ----------------CAGaGGTGTGGTGTGGTgtCAGG-----------
R:         17   T10302013300031320123201111011110123212020333320121    39        
--
>420_2697_2978_F3	ENSMUST00000113126	-	2594	2617	26	49	50	180	14x5x2x3	
G:       2617    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGA    2594      
                                          ||||||||||||||X||||X|X||
T:               -------------------------TGTGGTGTGGTGTCaGGGTgCtGG-
R:         26   T30323302210320331033221103111011110111232001230103    49        
--
>420_2818_893_F3	ENSMUST00000113126	+	2593	2617	11	35	50	170	2x2x4x3x14	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2617      
                           ||X|X|||X||X|||||||||||||
T:               ----------CCcAgCACcCTgACACCACACCACA---------------
R:         11   T10212010300031331120202111011110111300333203300132    35        
--
>420_2865_2867_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T23102010321301021123203111011110111002313203320322    35        
--
>420_3017_3411_F3	ENSMUST00000113126	-	2598	2623	20	45	50	200	3x3x16x4	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAA    2598      
                                    |||X||X|||||||||||||||X|||
T:               -------------------CAGaGGtGTGGTGTGGTGTCAGgGTG-----
R:         20   T12323302010303131033123203111011110111212201112032    45        
--
>421_72_2708_F3	ENSMUST00000113126	-	720	750	5	35	50	170	x4x6x10x1x1x1x8	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                     X|||X|||||X|||||||||XXXX|||||||
T:               ----cAATaTGCAGgCAGTAGGCActgaCATTGTC---------------
R:          5   T01020103031312231213203131011130112023201133022313    35        
--
>421_520_2107_F3	ENSMUST00000113126	+	2594	2621	12	39	50	186	3x5x2T12x5	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            |||X||||X| ||||||||||||X||||
T:               -----------CCAgCACCcTTACACCACACCACaCCTC-----------
R:         12   T23102010301301031103203111011110110102203333312212    39        
--
>421_3430_111_F3	ENSMUST00000113126	-	2600	2620	20	40	50	176	16T4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||||||||||||||| ||||
T:               -------------------AGGTGTGGTGTGGTGTTAGGG----------
R:         20   T01002013303111123223201111011110111032003003232010    40        
--
>421_3492_2079_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	14x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||||||X||||
T:               ---------------------GACACCACACCACAcCTCT----------
R:         22   T23302010303301021123232111011110111202223331222232    40        
--
>421_3791_3115_F3	ENSMUST00000113126	-	2596	2620	17	41	50	176	3x12x4C5	
G:       2620    TTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATCCC    2596      
                                 |||X|||||||||||X||| |||||
T:               ----------------AGGtGTGGTGTGGTGtCAGCGTGCT---------
R:         17   T22010302131123123203111011110110212331132323122223    41        
--
>422_275_3232_F3	ENSMUST00000113126	-	2604	2623	17	36	50	180	6x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 ||||||X|||||||||||||
T:               ----------------CAGAGGtGTGGTGTGGTGTC--------------
R:         17   T00202012320011022122203111011110111200023312201310    36        
--
>422_2134_158_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23302010303031121123203111011110111200302122030332    36        
--
>422_2136_1300_F3	ENSMUST00000113126	+	1163	1183	28	48	50	170	5x11x5	
G:       1163    CGAGGAGGATTCACAAATTGACATCGCTACAGTACAGGATATGCTTAGCA    1183      
                                            |||||X||||||||||X||||
T:               ---------------------------TACAGtACAGGATATGcTTAG--
R:         28   T02330201330310112312333011133112031120233310203220    48        
--
>422_2256_3266_F3	ENSMUST00000113126	-	2595	2625	13	43	50	176	2x3x3x14x1x3G4	
G:       2625    ATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATCC    2595      
                             ||X||X||X|||||||||||||XX|| ||||
T:               ------------GAcAGaGGtGTGGTGTGGTGTCagGGGGCTG-------
R:         13   T20221030313112312320311101111011122300003213100020    43        
--
>422_2438_3752_F3	ENSMUST00000113126	-	2599	2617	22	40	50	170	12x7	
G:       2617    AATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                      ||||||||||||X||||||
T:               ---------------------TGTGGTGTGGTGtCAGGGT----------
R:         22   T23302011031310231232031110111101102120013132222121    40        
--
>423_626_4730_F3	ENSMUST00000113126	-	2599	2623	14	38	50	170	6x10x2x2x5	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                              ||||||X|||||||||X|X|X||||
T:               -------------CAGAGGtGTGGTGTGGtGtCaGGGT------------
R:         14   T22010302131313122203111011110312232001210322301100    38        
--
>423_646_4079_F3	ENSMUST00000113126	-	2596	2627	14	45	50	186	2x2T2x11x8x2x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X| ||X||||||||||X|||||||X|X|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAGgGtGCT-----
R:         14   T02330201030310312332320111101112011121230013202221    45        
--
>423_1191_4234_F3	ENSMUST00000113126	-	2596	2614	17	35	50	190	19	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTAAAAATCCCTCAAAG    2596      
                                 |||||||||||||||||||
T:               ----------------GGTGTGGTGTCAGGGTGCT---------------
R:         17   T00133031111202232011110111212001132021320213321201    35        
--
>423_1299_3966_F3	ENSMUST00000113126	-	1434	1458	11	35	50	176	3C5x2x14	
G:       1458    CAAAGAAAACCGGACTCGAAGTACAGGTGCTTGTACCAGAAGGAGAAGAA    1434      
                           ||| |||||X|X|||||||||||||
T:               ----------CGGCCTCGAaGtACAGGTGCTTGTA---------------
R:         11   T23301010303303022323203112011320113302002332333212    35        
--
>423_3936_1686_F3	ENSMUST00000113126	-	2605	2626	15	36	50	160	1x5x11x5	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAA    2605      
                               |X||||X||||||||||X||||
T:               --------------AgACAGaGGTGTGGTGTgGTGT--------------
R:         15   T02130201330310212112320111101112011131320322223133    36        
--
>424_1409_2693_F3	ENSMUST00000113126	-	2601	2620	19	38	50	160	1x2x17	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |X|X||||||||||||||||
T:               ------------------AgGtGTGGTGTGGTGTCAGG------------
R:         19   T310201030313102312330311101111011121203233323311.0    38        
--
>424_1555_4947_F3	ENSMUST00000113126	-	2068	2099	9	40	50	160	1x3x5x1x2x11x2x3x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X||||||||||X|X||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAAtCTG----------
R:          9   T001330311112022320111101112320031330122102233121.1    40        
--
>424_1921_2454_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x3x16	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||X|||||||||||||||
T:               ------------------AGaGGtGTGGTGTGGTGTCAG-----------
R:         19   T120302010303003123323203111011110111212203103020.2    39        
--
>424_2127_3660_F3	ENSMUST00000113126	-	80	110	16	46	50	190	3x2x13x2x2x6x3	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    80        
                                |||X|X||||||||||||X|X|X|||||X||
T:               ---------------ACTgGtCACGTGTGACTGtCgAaTATGAgCT----
R:         16   T200201030303112312302211311112121021233331233222.1    46        
--
>424_2472_4923_F3	ENSMUST00000113126	-	2602	2620	23	41	50	170	3x16	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                       |||X|||||||||||||||
T:               ----------------------AGGtGTGGTGTGGTGTCAG---------
R:         23   T030233022103002310331232031110111101112123202223.1    41        
--
>424_2831_2813_F3	ENSMUST00000113126	-	2595	2623	16	44	50	176	x3x3x16x2G4	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                                X||X||X|||||||||||||||X| ||||
T:               ---------------cAGaGGtGTGGTGTGGTGTCAGgGGGCTG------
R:         16   T020201032313102312320211101111011121230003213322.1    44        
--
>425_288_4124_F3	ENSMUST00000113126	-	2595	2622	19	46	50	180	2x3x16x1x1x5	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                   ||X||X|||||||||||||||XXX||||
T:               ------------------AGaGGtGTGGTGTGGTGTCAGggtGCTG----
R:         19   T31130201030320112002320011101111011121213313212311    46        
--
>425_1445_3381_F3	ENSMUST00000113126	-	2600	2628	13	41	50	176	1x2x2T2x11x10	
G:       2628    GAAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                             |X|X| ||X||||||||||X|||||||||
T:               ------------GtAgATAGaGGTGTGGTGTgGTGTCAGGG---------
R:         13   T13330201030300302332320111101112011121200323022033    41        
--
>425_2466_3872_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T30230201130310112332320111101112011121232022322303    39        
--
>425_2605_360_F3	ENSMUST00000113126	+	2602	2621	20	39	50	180	2x18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    ||X|||||||||||||||||
T:               -------------------CTgACACCACACCACACCTC-----------
R:         20   T23102013303003012323202111011110111102210333322310    39        
--
>425_2804_2764_F3	ENSMUST00000113126	-	2600	2626	15	41	50	176	1x2T13x4x6	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                               |X| |||||||||||||X|||X|||||
T:               --------------AgATAGAGGTGTGGTGTgGTGtCAGGG---------
R:         15   T02330201230310112332220111101112011221200020312002    41        
--
>426_474_2807_F3	ENSMUST00000113126	-	2591	2627	14	50	50	196	2x2T2x11x6x2x2x4x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2591      
                              ||X| ||X||||||||||X|||||X|X|X|||X||||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCaGgGtGCTgGGTA
R:         14   T02330201030310312332320111101112011120210313200013    50        
--
>426_564_4090_F3	ENSMUST00000113126	+	2593	2621	11	39	50	176	4x1x3x1x2T17	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                           ||||XX||XX| |||||||||||||||||
T:               ----------CCCAgcACccTTACACCACACCACACCTC-----------
R:         11   T23102010320001001113203111011110111102230113213211    39        
--
>426_1270_4207_F3	ENSMUST00000113126	-	2601	2621	24	44	50	170	1x5x15	
G:       2621    GAAAGAAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGTGAAAA    2601      
                                        |X||||X||||||||||||||
T:               -----------------------GaGGTGtGGTGTGGTGTCAGG------
R:         24   T02123111212330201033203112011310111101112120222232    44        
--
>426_1603_3244_F3	ENSMUST00000113126	-	2599	2617	22	40	50	170	8x11	
G:       2617    AATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                      ||||||||X||||||||||
T:               ---------------------TGTGGTGTgGTGTCAGGGT----------
R:         22   T02022103232310231233121110111301112120010203212220    40        
--
>426_1709_1923_F3	ENSMUST00000113126	-	2584	2614	15	45	50	176	2x12x2x2A5x2x5	
G:       2614    AATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTTGCCAAGAG    2584      
                               ||X|||||||||||X|X| |||||X|X||||
T:               --------------GGtGTGGTGTCAGGgTgCAGGGTAcCtTGCC-----
R:         15   T10303131122123203111011121202103120013203013010310    45        
--
>426_1823_3797_F3	ENSMUST00000113126	-	2599	2623	19	43	50	190	3x3x10x9	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAA    2599      
                                   |||X||X|||||||||X||||||||
T:               ------------------CAGaGGtGTGGTGTGGtGTCAGGGT-------
R:         19   T31233122133000311231232031110111102112120012020330    43        
--
>426_2112_4340_F3	ENSMUST00000113126	-	2604	2622	19	37	50	170	2x17	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                   ||X||||||||||||||||
T:               ------------------AGaGGTGTGGTGTGGTGTC-------------
R:         19   T02030201030310302232320111101111011120031331002132    37        
--
>426_2272_2515_F3	ENSMUST00000113126	-	2593	2623	17	47	50	176	3x3x13x3C1x4x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                 |||X||X||||||||||||X|| |X|||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTcAGCGtGCTgGG---
R:         17   T10331010330011300123203111011110111312333132300033    47        
--
>426_2394_4554_F3	ENSMUST00000113126	-	2601	2623	16	38	50	170	3x3x8x9	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                |||X||X|||||||X||||||||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGG------------
R:         16   T02102010331310231232031110111201112120113103233302    38        
--
>426_2622_897_F3	ENSMUST00000113126	-	2599	2620	19	40	50	180	3x8x11	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X|||||||X||||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGT----------
R:         19   T20020103031310231232031110111201112120010000300210    40        
--
>426_2655_4300_F3	ENSMUST00000113126	-	2592	2617	23	48	50	172	15T1C3x5	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2592      
                                       ||||||||||||||| | |||X||||
T:               ----------------------TGTGGTGTGGTGTCATGCTGCtGGGT--
R:         23   T03321010203033023113203111011110111213132130100123    48        
--
>426_3258_2260_F3	ENSMUST00000113126	-	2596	2626	15	45	50	196	1x2T13x6x2x6	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                               |X| |||||||||||||X|||||X|X|||||
T:               --------------AgATAGAGGTGTGGTGTgGTGTCaGgGTGCT-----
R:         15   T02330201230310112332220111101112011120230113220310    45        
--
>426_3878_875_F3	ENSMUST00000113126	-	2597	2620	19	42	50	180	1x2x18x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |X|X|||||||||||||||||X||
T:               ------------------AgGtGTGGTGTGGTGTCAGGGtGC--------
R:         19   T31020103031310231233021110111101112120001312030333    42        
--
>427_1283_4451_F3	ENSMUST00000113126	-	245	270	19	44	50	160	1x5x2x9x2x7	
G:        270    TAAATCATTGTGTCTAAGTCGATGTAATATCAACAGACTGGGCGGCAAAG    245       
                                   |X||||X|X||||||||X|X||||||
T:               ------------------TcGATGtAaTATCAACAgAcTGGGCG------
R:         19   T32311003102000303131323123233321011120210033021130    44        
--
>427_3038_1293_F3	ENSMUST00000113126	-	2602	2623	20	41	50	160	1x2x11x8	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |X|X||||||||||X|||||||
T:               -------------------CaGaGGTGTGGTGTgGTGTCAG---------
R:         20   T03323302210300031033223201111011120111212232313303    41        
--
>428_1367_1776_F3	ENSMUST00000113126	-	2596	2627	13	44	50	180	7x3x2x11x1x2x2x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                             |||||||X||X|X||||||||||XX|X|X|||
T:               ------------TAGACAGaGGtGtGGTGTGGTGTcaGgGtGCT------
R:         13   T3232131330300322112320312101111011132220313233231.    44        
--
>428_1867_3871_F3	ENSMUST00000113126	-	2602	2622	18	38	50	170	2x15x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||||||||||||||X|||
T:               -----------------AGaGGTGTGGTGTGGTGtCAG------------
R:         18   T0123201120201333122320111101111011321223013322122.    38        
--
>428_1956_3605_F3	ENSMUST00000113126	+	2594	2627	12	45	50	166	3T3x1x3x13x2x2x2x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                            ||| |||XX||X||||||||||||X|X|X|X|||
T:               -----------CCATCACccTGaCACCACACCACAcCtCtGtCTA-----
R:         12   T0110201330320132112321311101111011120123122233032.    45        
--
>428_2145_4806_F3	ENSMUST00000113126	-	2604	2620	21	37	50	170	17	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                     |||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTC-------------
R:         21   T3133020103031000203202011110111101112010301023101.    37        
--
>428_2436_4094_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T2323201032020103031320011101111011110222002033122.    40        
--
>428_3246_2510_F3	ENSMUST00000113126	-	2599	2623	20	44	50	170	3x3x14x2x3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAA    2599      
                                    |||X||X|||||||||||||X|X||
T:               -------------------CAGaGGtGTGGTGTGGTGTCaGgGT------
R:         20   T0312330221030010103312320311101111011122220131330.    44        
--
>428_4035_2262_F3	ENSMUST00000113126	-	2603	2622	19	38	50	180	2x18	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                   ||X|||||||||||||||||
T:               ------------------AGaGGTGTGGTGTGGTGTCA------------
R:         19   T0233020113031011233232011110111101112112322132211.    38        
--
>428_4178_2846_F3	ENSMUST00000113126	-	2598	2624	19	45	50	190	1x6x3x11x6	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAA    2598      
                                   |X|||||X||X||||||||||X|||||
T:               ------------------AcAGAGGtGTgGTGTGGTGTCaGGGTG-----
R:         19   T1222330221030033103312220211201111011123200112230.    45        
--
>428_4299_1758_F3	ENSMUST00000113126	+	2602	2619	20	37	50	160	3x15	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                                    |||X||||||||||||||
T:               -------------------CTGaCACCACACCACACC-------------
R:         20   T2301230230130300220321311101111011110310202233000.    37        
--
>429_849_3700_F3	ENSMUST00000113126	-	2215	2231	15	31	50	150	1x16	
G:       2231    ACGGATTTTCCGCCCACGCATGCACTTACGCCCATTCATAAGTTTGGCTT    2215      
                               |X|||||||||||||||
T:               --------------CaCGCATGCACTTACGC-------------------
R:         15   T100332331113102013313131120313310123311122.2022132    31        
--
>429_1636_518_F3	ENSMUST00000113126	-	726	754	1	29	50	176	x4x10x8x3G3	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACCCTGTGATCTGAGAGACAGGT    726       
                 X|||X|||||||||X|||||||X|| |||
T:               tCAGcAATATGCAGgCAGTAGGcACGGAC---------------------
R:          1   T121201033313122312132021130210002102313233.0201012    29        
--
>429_3416_1883_F3	ENSMUST00000113126	-	2601	2624	19	42	50	180	1x3x10x10	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                   |X||X|||||||||X|||||||||
T:               ------------------AcAGaGGTGTGGTGtGGTGTCAGG--------
R:         19   T303013020103001311331232011110113101112120.3212111    42        
--
>430_1262_1896_F3	ENSMUST00000113126	-	2597	2624	16	43	50	160	2x2x3x12x2x4x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                ||X|X||X|||||||||||X|X|||X||
T:               ---------------ACaGaGGtGTGGTGTGGTGtCaGGGtGC-------
R:         16   T23112013333301031323203111011110113202003133322300    43        
--
>430_1512_1315_F3	ENSMUST00000113126	+	2608	2627	17	36	50	180	10x10	
G:       2608    ACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGCCTCT    2627      
                                 ||||||||||X|||||||||
T:               ----------------CCACACCACAcCTCTGTCTA--------------
R:         17   T00133031111232232011110111202221122323030302300300    36        
--
>430_2062_3411_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23102010300303301123203111011110111203133122123330    36        
--
>430_2475_3311_F3	ENSMUST00000113126	-	2603	2626	15	38	50	166	1x2T5x15	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                               |X| |||||X||||||||||||||
T:               --------------AgATAGAGGtGTGGTGTGGTGTCA------------
R:         15   T31030201230310212332220311101111011121013331001020    38        
--
>430_3790_4958_F3	ENSMUST00000113126	+	2602	2621	20	39	50	180	2x18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    ||X|||||||||||||||||
T:               -------------------CTgACACCACACCACACCTC-----------
R:         20   T01300201230313312113202111011110111102203023122330    39        
--
>431_596_2611_F3	ENSMUST00000113126	-	2596	2625	15	44	50	186	1x4x3x14x4G3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               |X|||X||X|||||||||||||X||| |||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCaGGGGGCT------
R:         15   T23102010301000001123203111011110111222000032322112    44        
--
>431_1180_2956_F3	ENSMUST00000113126	-	2601	2620	19	38	50	180	3x17	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |||X||||||||||||||||
T:               ------------------AGGtGTGGTGTGGTGTCAGG------------
R:         19   T31020103031310231232031110111101112120233100132033    38        
--
>431_2232_3926_F3	ENSMUST00000113126	-	2592	2620	21	49	50	190	11x6x2x4x3x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                                     |||||||||||X|||||X|X|||X||X||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGTGcTGgGT-
R:         21   T31330201030310112332320111101112011120230112212010    49        
--
>431_2460_3766_F3	ENSMUST00000113126	-	2595	2632	13	50	50	180	1x2x2x2x4x14x2x4x1x3x3	
G:       2632    GAAAGAAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTG    2595      
                             |X|X|X|X|||X|||||||||||||X|X|||XX||X||
T:               ------------TgGtGtAgACAgAGGTGTGGTGTGGtGtCAGggTGcTG
R:         13   T11123233220200031033211122011110111103122122311021    50        
--
>431_2702_1410_F3	ENSMUST00000113126	-	2595	2622	18	45	50	180	2x3x14x4x1x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                  ||X||X|||||||||||||X|||XX|||
T:               -----------------AGaGGtGTGGTGTGGTGTCaGGGtgCTG-----
R:         18   T23322013002103000323202111011110111202002332112120    45        
--
>431_2909_2298_F3	ENSMUST00000113126	-	2597	2622	19	44	50	180	2x11x6x4x3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                   ||X||||||||||X|||||X|||X||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGGGtGC------
R:         19   T13330201030310112232320111101112011120200313111302    44        
--
>431_3378_678_F3	ENSMUST00000113126	-	2596	2623	20	47	50	186	3x3x8x9A4	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                    |||X||X|||||||X|||||||| ||||
T:               -------------------CAGaGGtGTGGTGTgGTGTCAGGATGCT---
R:         20   T12323302010303131033123203111011120111212023132210    47        
--
>431_3419_2689_F3	ENSMUST00000113126	-	2597	2631	10	44	50	176	2x2C1x2x14x6x2x2x3	
G:       2631    GAAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                          ||X| |X|X|||||||||||||X|||||X|X|X||
T:               ---------GGtGCAgAcAGAGGTGTGGTGTgGTGTCaGgGtGC------
R:         10   T11010201030313112312220111101112011122230213120321    44        
--
>431_3518_2733_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	2x5x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X||||X||X|||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T33302210320303021123203111011110111202300231330232    36        
--
>431_3643_550_F3	ENSMUST00000113126	-	2597	2617	20	40	50	190	16x5	
G:       2617    TTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                                    ||||||||||||||||X||||
T:               -------------------TGTGGTGTGGTGTCAGgGTGC----------
R:         20   T22010302131123323203111011110111212201133012020131    40        
--
>431_4035_5037_F3	ENSMUST00000113126	-	2599	2620	23	44	50	180	3x14x5	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAA    2599      
                                       |||X|||||||||||||X||||
T:               ----------------------AGGtGTGGTGTGGTGTCaGGGT------
R:         23   T21223302010323131013123203111011110111232001220232    44        
--
>431_4091_1903_F3	ENSMUST00000113126	-	2600	2622	19	41	50	190	2x11x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGG---------
R:         19   T02330201130310112332320111101112011121200220321320    41        
--
>431_4174_2624_F3	ENSMUST00000113126	+	2592	2621	10	39	50	172	4G2x2x1x2T17	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                          |||| ||X|XX| |||||||||||||||||
T:               ---------ACCCGGCaCccTTACACCACACCACACCTC-----------
R:         10   T23322010001003030113203111011110111102233002202032    39        
--
>432_186_3687_F3	ENSMUST00000113126	-	2599	2625	16	42	50	210	3x2x19x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                |||X|X||||||||||||||||||X||
T:               ---------------GACaGaGGTGTGGTGTGGTGTCAGgGT--------
R:         16   T0010020103031211213232011110111101112123013.003112    42        
--
>432_261_112_F3	ENSMUST00000113126	-	2598	2623	18	43	50	180	1x2x11x5x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                  |X|X||||||||||X||||X||||||
T:               -----------------CaGaGGTGTGGTGTgGTGTcAGGGTG-------
R:         18   T0233020103031311233232011110111201110120011.022321    43        
--
>432_1962_2619_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	16x3	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||||||||X||
T:               ---------------------GACACCACACCACACCtCT----------
R:         22   T2330201030133131312320211101111011110122033.222332    40        
--
>432_1964_4707_F3	ENSMUST00000113126	+	2602	2620	20	38	50	170	3x16	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                    |||X|||||||||||||||
T:               -------------------CTGaCACCACACCACACCT------------
R:         20   T3310201020210300032321311101111011110230233.312332    38        
--
>432_2011_3721_F3	ENSMUST00000113126	-	2603	2620	19	36	50	160	3x15	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                                   |||X||||||||||||||
T:               ------------------AGGtGTGGTGTGGTGTCA--------------
R:         19   T1212010303131023123203111011110111213303130.120112    36        
--
>432_2022_3349_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2330201230100330011320311101111011110222302.222032    40        
--
>432_2498_382_F3	ENSMUST00000113126	-	2602	2620	25	43	50	170	11x8	
G:       2620    GAAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAA    2602      
                                         |||||||||||X|||||||
T:               ------------------------AGGTGTGGTGTgGTGTCAG-------
R:         25   T1112323122010003133120113201111011120111212.012023    43        
--
>432_2629_1650_F3	ENSMUST00000113126	-	2603	2618	23	38	50	160	16	
G:       2618    GAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                       ||||||||||||||||
T:               ----------------------GTGTGGTGTGGTGTCA------------
R:         23   T2213020103031031223232311110111101112101030.312103    38        
--
>432_2639_2804_F3	ENSMUST00000113126	-	2601	2623	20	42	50	170	3x3x8x9	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                    |||X||X|||||||X||||||||
T:               -------------------CAGaGGtGTGGTGTgGTGTCAGG--------
R:         20   T1212312201030333103312320311101112011121203.222321    42        
--
>432_2889_3192_F3	ENSMUST00000113126	-	2600	2617	26	43	50	180	18	
G:       2617    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                          ||||||||||||||||||
T:               -------------------------TGTGGTGTGGTGTCAGGG-------
R:         26   T1232330201030023103312310311101111011121200.312020    43        
--
>432_2931_4802_F3	ENSMUST00000113126	-	2600	2623	16	39	50	180	3x3x8x10	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                |||X||X|||||||X|||||||||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGGG-----------
R:         16   T1302010203131023123203111011120111212000030.112020    39        
--
>432_3477_2356_F3	ENSMUST00000113126	-	2595	2617	26	48	50	160	14x2x2x5	
G:       2617    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGAA    2595      
                                          ||||||||||||||X|X|X||||
T:               -------------------------TGTGGTGTGGTGTCaGgGtGCTG--
R:         26   T1232330201030013103312320311101111011123230.332131    48        
--
>432_3585_684_F3	ENSMUST00000113126	-	2601	2623	20	42	50	176	3x16G3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                    |||X||||||||||||||| |||
T:               -------------------CAGaGGTGTGGTGTGGTGTGAGG--------
R:         20   T1012330221030333103312320111101111011112203.000230    42        
--
>432_3695_950_F3	ENSMUST00000113126	-	2600	2627	14	41	50	166	2x2T2x15x2x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X| ||X||||||||||||||X|X|||
T:               -------------TAgATAGaGGTGTGGTGTGGTGtCaGGG---------
R:         14   T0213020123031031233232011110111101132020032.003230    41        
--
>432_3698_2674_F3	ENSMUST00000113126	-	2596	2629	12	45	50	176	2x2x2T2x11x8x2x4	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                            ||X|X| ||X||||||||||X|||||||X|X|||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCAGgGtGCT-----
R:         12   T0013020113031031233232011110111201112122021.120123    45        
--
>432_4155_1586_F3	ENSMUST00000113126	-	2599	2620	21	42	50	180	11x6x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                     |||||||||||X|||||X||||
T:               --------------------AGGTGTGGTGTgGTGTCaGGGT--------
R:         21   T0013020123031031233232011110111201112220010.323131    42        
--
>432_4305_1819_F3	ENSMUST00000113126	-	2600	2622	19	41	50	190	2x11x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGG---------
R:         19   T0233020113031011222232011110111201112120023.220323    41        
--
>433_764_2257_F3	ENSMUST00000113126	-	2604	2625	22	43	50	160	x8x10x4	
G:       2625    AAGAAAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAA    2604      
                                      X|||||||X|||||||||X|||
T:               ---------------------gACAGAGGtGTGGTGTGGtGTC-------
R:         22   T1003012223022303001311211222031110111102112.322021    43        
--
>433_1395_3743_F3	ENSMUST00000113126	-	2600	2629	11	40	50	186	4x2x2x1x3A17	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                           ||||X|X|XX|| |||||||||||||||||
T:               ----------TGTAgAcAgaGGAGTGGTGTGGTGTCAGGG----------
R:         11   T3232001020311312311320221101111011121200330.102310    40        
--
>433_1416_4853_F3	ENSMUST00000113126	-	2594	2623	16	45	50	176	3x11x6x2x3A4	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                                |||X||||||||||X|||||X|X|| ||||
T:               ---------------CAGaGGTGTGGTGTgGTGTCaGgGTACTGG-----
R:         16   T3102010323231023123201111011120111232201312.312321    45        
--
>433_1831_2107_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	14x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||||||X||||
T:               ---------------------GACACCACACCACAcCTCT----------
R:         22   T2330201300200300201320211101111011100222303.232302    40        
--
>433_2399_406_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T1001201031120123012320311101111011121223333.220113    38        
--
>433_2614_3243_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2032203031010231202320311101111011110222022.310131    40        
--
>433_2706_4358_F3	ENSMUST00000113126	-	2595	2620	23	48	50	170	3x8x2x6x7	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAA    2595      
                                       |||X|||||||X|X|||||X||||||
T:               ----------------------AGGtGTGGTGTgGtGTCAGgGTGCTG--
R:         23   T1212330201030013103312320311101112021121220.132110    48        
--
>433_2712_4406_F3	ENSMUST00000113126	+	2599	2622	17	40	50	200	3x2x19	
G:       2599    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                 |||X|X||||||||||||||||||
T:               ----------------ACCcTgACACCACACCACACCTCT----------
R:         17   T3323302020100330010320211101111011110222332.222220    40        
--
>433_3187_2921_F3	ENSMUST00000113126	-	2602	2624	19	41	50	170	4x3x8x8	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                   ||||X||X|||||||X|||||||
T:               ------------------ACAGaGGtGTGGTGTgGTGTCAG---------
R:         19   T1222330201030013103112320311101112011121223.332330    41        
--
>433_3197_1277_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T0233020133031011203232011110111201112020003.111313    41        
--
>433_3943_3333_F3	ENSMUST00000113126	+	2604	2622	21	39	50	170	14x5	
G:       2604    GGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAG    2622      
                                     ||||||||||||||X||||
T:               --------------------GACACCACACCACAcCTCT-----------
R:         21   T3102010303131023123202111011110111202223010.311121    39        
--
>434_631_4133_F3	ENSMUST00000113126	+	2605	2624	23	42	50	180	12x8	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                       ||||||||||||X|||||||
T:               ----------------------ACACCACACCACaCCTCTGT--------
R:         23   T23322010300001302103203111011110112102221102022102    42        
--
>434_1361_1392_F3	ENSMUST00000113126	-	2594	2615	16	37	50	180	1x15x6	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGAAATCCCTCAAAG    2594      
                                |X||||||||||||||X|||||
T:               ---------------TgGTGTGGTGTCAGGGtGCTGG-------------
R:         16   T00133031111232232011110111212002132102020323322022    37        
--
>434_1408_2928_F3	ENSMUST00000113126	-	2602	2629	12	39	50	166	2x2x2T2x11x8	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X| ||X||||||||||X|||||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCAG-----------
R:         12   T13030201230310312332320111101112011121220302302230    39        
--
>434_1537_1773_F3	ENSMUST00000113126	-	2600	2622	19	41	50	170	2x11x7x3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X||||||X||
T:               ------------------AGaGGTGTGGTGTgGTGTCAgGG---------
R:         19   T02130201330310112332320111101112011121000322323203    41        
--
>434_1664_3162_F3	ENSMUST00000113126	-	2599	2621	19	41	50	210	20x3	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                   ||||||||||||||||||||X||
T:               ------------------GAGGTGTGGTGTGGTGTCAGgGT---------
R:         19   T01001013300111312232201111011110111212301322002200    41        
--
>434_1875_3855_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T23302113303103323123203111011110111212323030311230    38        
--
>434_2176_2994_F3	ENSMUST00000113126	-	2596	2627	14	45	50	172	2x2T2x8x9x4A3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X| ||X|||||||X||||||||X||| |||
T:               -------------TAgATAGaGGTGTGGtGTGGTGTCaGGGAGCT-----
R:         14   T22130201030310312332320111102111011120200223220323    45        
--
>434_2446_2870_F3	ENSMUST00000113126	-	2600	2625	16	41	50	200	2x5x1x18	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||||XX|||||||||||||||||
T:               ---------------GAcAGAGgtGTGGTGTGGTGTCAGGG---------
R:         16   T13030201030310312312221311101111011121200202132312    41        
--
>434_2657_4222_F3	ENSMUST00000113126	+	2597	2625	15	43	50	170	2x2x1x3x15x3x3	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                               ||X|XX||X||||||||||||||X||X||
T:               --------------GCaCccTGaCACCACACCACACCtCTgTC-------
R:         15   T33102012300002032123213111011110111103223120221212    43        
--
>434_2873_4865_F3	ENSMUST00000113126	-	2592	2620	21	49	50	176	x11x8x3T3x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                                     X||||||||||X|||||||X|| |||X||
T:               --------------------aGGTGTGGTGTgGTGTCAGgGTTCTGgGT-
R:         21   T02130201030310312302320111101112011121220102212010    49        
--
>434_3574_4183_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x14x1x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X|||||||||||||XX||||||
T:               ---------------GAcAGAGGTGTGGTGTggTGTCAG-----------
R:         16   T02300201230310112312220111101112211121230211200101    39        
--
>435_204_2886_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	1x2x19	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |X|X||||||||||||||||||
T:               ----------------CaGaGGTGTGGTGTGGTGTCAG------------
R:         17   T0100201330201300022320111101111011121212311310223.    38        
--
>435_904_2395_F3	ENSMUST00000113126	-	1697	1721	4	28	50	176	9x10x2G3	
G:       1721    TCACAGCAGCCTGTGCCTGCGGGTCTCGAAGCAGAAACCCATCTCAATCG    1697      
                    |||||||||X|||||||||X| |||
T:               ---CAGCAGCCTgTGCCTGCGGgTGTCG----------------------
R:          4   T1131123123020113021330311123113011101330302132210.    28        
--
>435_1009_4108_F3	ENSMUST00000113126	-	2256	2275	4	23	50	160	3x6x11	
G:       2275    CTGGCCTTAGAAGGCTACGCACGGGAGGTCGACACGGATTTTCCGCCACT    2256      
                    |||X|||||X||||||||||
T:               ---GCCtTAGAAgGCTACGCACG---------------------------
R:          4   T2223301032200032313311313101121311112102301233003.    23        
--
>435_2045_3932_F3	ENSMUST00000113126	+	2593	2620	11	38	50	172	3G4x1x2T16	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                           ||| ||||XX| ||||||||||||||||
T:               ----------CCCGGCACccTTACACCACACCACACCT------------
R:         11   T2330201030000303112320311101111011110212001012133.    38        
--
>435_2385_647_F3	ENSMUST00000113126	-	2600	2624	16	40	50	190	1x6x13x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                |X|||||X||||||||||||X||||
T:               ---------------AcAGAGGtGTGGTGTGGTGTcAGGG----------
R:         16   T2003031011232223212220211101111011101200331232320.    40        
--
>435_2555_1505_F3	ENSMUST00000113126	-	2599	2626	21	48	50	180	1x8x8x4x4x3	
G:       2626    AAGAAAGAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAA    2599      
                                     |X|||||||X|||||||X|||X|||X||
T:               --------------------AgACAGAGGtGTGGTGTgGTGtCAGgGT--
R:         21   T2101123213020303001310211222031110111201132122012.    48        
--
>435_2585_1324_F3	ENSMUST00000113126	-	2604	2625	19	40	50	180	2x14x6	
G:       2625    AAAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAA    2604      
                                   ||X|||||||||||||X|||||
T:               ------------------GAcAGAGGTGTGGTGTgGTGTC----------
R:         19   T1211133020103031001201222011110111201112322223222.    40        
--
>435_2680_372_F3	ENSMUST00000113126	+	2601	2620	19	38	50	160	1x2x17	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                   |X|X||||||||||||||||
T:               ------------------CcTgACACCACACCACACCT------------
R:         19   T2310201030030102332323211101111011110230301022211.    38        
--
>435_2829_1123_F3	ENSMUST00000113126	-	2599	2623	19	43	50	170	5x1x10x6x3	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAA    2599      
                                   |||||XX|||||||||X|||||X||
T:               ------------------CAGAGgtGTGGTGTGGtGTCAGgGT-------
R:         19   T3323302310300031023122233111011110211212101312002.    43        
--
>435_2925_4479_F3	ENSMUST00000113126	-	2601	2620	23	42	50	160	3x8x9	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                       |||X|||||||X||||||||
T:               ----------------------AGGtGTGGTGTgGTGTCAGG--------
R:         23   T3012330221030033103312320311101112011121203330232.    42        
--
>435_3355_3776_F3	ENSMUST00000113126	-	2593	2625	16	48	50	170	2x3x15x2x2x2x1x1x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                ||X||X||||||||||||||X|X|X|XXX||||
T:               ---------------GAcAGaGGTGTGGTGTGGTGtCaGgGtgcTGGG--
R:         16   T0332020103031331231232011110111101132023023021002.    48        
--
>435_3445_2916_F3	ENSMUST00000113126	+	2602	2619	20	37	50	180	18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                                    ||||||||||||||||||
T:               -------------------CTGACACCACACCACACC-------------
R:         20   T0013333111122223201321211101111011110112033222232.    37        
--
>435_3762_2879_F3	ENSMUST00000113126	-	2602	2620	23	41	50	170	3x16	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                       |||X|||||||||||||||
T:               ----------------------AGGtGTGGTGTGGTGTCAG---------
R:         23   T1212330201030023103322320311101111011121222012000.    41        
--
>435_3954_3021_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T0213020103031011221232011110111201112122021220120.    39        
--
>435_3988_1965_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T3112020123031331233232011110111201112121300322231.    39        
--
>435_4048_968_F3	ENSMUST00000113126	-	2602	2625	22	45	50	180	8x10x2x4	
G:       2625    AAGAAAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAA    2602      
                                      ||||||||X|||||||||X|X|||
T:               ---------------------GACAGAGGtGTGGTGTGGtGtCAG-----
R:         22   T2301123213020303001310211222031110111102102122120.    45        
--
>435_4049_1238_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	14x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||||||X||||
T:               ---------------------GACACCACACCACAcCTCT----------
R:         22   T2330203000310300031320211101111011120222300102031.    40        
--
>436_861_1539_F3	ENSMUST00000113126	-	2598	2623	17	42	50	180	5x1x1x11x8	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                 |||||XXX||||||||||X|||||||
T:               ----------------CAGAGgtgTGGTGTGGTGtCAGGGTG--------
R:         17   T2312201030300102012223301101111011221200111.221230    42        
--
>436_1336_4199_F3	ENSMUST00000113126	+	2602	2620	20	38	50	170	3x16	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                    |||X|||||||||||||||
T:               -------------------CTGaCACCACACCACACCT------------
R:         20   T2330201030130331011321311101111011110232300.321302    38        
--
>436_2105_1953_F3	ENSMUST00000113126	-	2599	2620	19	40	50	160	3x12x4x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X|||||||||||X|||X||
T:               ------------------AGGtGTGGTGTGGTGtCAGgGT----------
R:         19   T3102010303131023123203111011110113212101303.022221    40        
--
>436_2236_1193_F3	ENSMUST00000113126	-	2604	2625	16	37	50	180	5x11x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                |||||X||||||||||X|||||
T:               ---------------GACAGaGGTGTGGTGTgGTGTC-------------
R:         16   T0313020123031011211232011110111201112003301.003232    37        
--
>436_2309_1837_F3	ENSMUST00000113126	-	2602	2622	19	39	50	190	13x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   |||||||||||||X|||||||
T:               ------------------AGAGGTGTGGTGTgGTGTCAG-----------
R:         19   T0213020133031011233222011110111201112122033.200322    39        
--
>436_2332_2819_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	1x2x11x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |X|X||||||||||X|||||||||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAGGG---------
R:         18   T0023020103031011233232011110111201112120031.121320    41        
--
>436_2499_3865_F3	ENSMUST00000113126	-	2596	2623	20	47	50	190	x6x14x3x5	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                    X|||||X|||||||||||||X||X||||
T:               -------------------cAGAGGtGTGGTGTGGTGTCaGGgTGCT---
R:         20   T1212330201030013103312220311101111011123202.232330    47        
--
>436_2596_4436_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T3232020133031221220220311101111011110222002.022212    40        
--
>436_2810_1141_F3	ENSMUST00000113126	-	2601	2623	17	39	50	150	x3x3x14x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 X||X||X|||||||||||||X||
T:               ----------------cAGaGGtGTGGTGTGGTGTCaGG-----------
R:         17   T3102201000003103212320311101111011120202320.032321    39        
--
>436_2923_1534_F3	ENSMUST00000113126	-	2603	2620	18	35	50	160	3x15	
G:       2620    ATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAATCC    2603      
                                  |||X||||||||||||||
T:               -----------------AGGtGTGGTGTGGTGTCA---------------
R:         18   T1310103101311231232031110111101112101221103.100100    35        
--
>436_3038_4711_F3	ENSMUST00000113126	+	2601	2627	19	45	50	186	1x14x4A7	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                   |X|||||||||||||X||| |||||||
T:               ------------------CcTGACACCACACCAcACCACTGTCTA-----
R:         19   T2330201030300112212321211101111013110112112.200203    45        
--
>436_3364_2570_F3	ENSMUST00000113126	-	2596	2620	21	45	50	180	11x6x4x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                     |||||||||||X|||||X|||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGGtGCT-----
R:         21   T0233020123031011213232011110111201112320021.223023    45        
--
>436_3605_2088_F3	ENSMUST00000113126	+	2594	2620	12	38	50	190	x6x2x14x5	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                            X|||||X|X|||||||||||||X||||
T:               -----------cCAGCAcCcTGACACCACACCAcACCT------------
R:         12   T0100201330320123120321211101111013110233032.101332    38        
--
>436_3790_2455_F3	ENSMUST00000113126	+	2591	2617	9	35	50	170	3x1x5x2x3x13	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2617      
                         |||XX||||X|X||X||||||||||||
T:               --------TACccAGCAcCcTGaCACCACACCACA---------------
R:          9   T0112010303131123130321311101111011100323322.221333    35        
--
>436_4121_2096_F3	ENSMUST00000113126	-	2601	2620	19	38	50	160	3x14x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |||X|||||||||||||X||
T:               ------------------AGGtGTGGTGTGGTGTCaGG------------
R:         19   T3102010303131023123203111011110111232020330.031203    38        
--
>436_4182_4662_F3	ENSMUST00000113126	+	2589	2621	7	39	50	196	2x1x5x4x1x2T17	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                       ||XX||||X|||XX| |||||||||||||||||
T:               ------GGtaCCCAgCACccTTACACCACACCACACCTC-----------
R:          7   T2330201030100133112320311101111011110220003.322230    39        
--
>437_1094_877_F3	ENSMUST00000113126	+	167	187	11	31	50	190	5x16	
G:        167    ACCTAGAGAAGACTCATCCTCCGTCAGTGCCTGGAGACAGTGGGTCAGAA    187       
                           |||||X|||||||||||||||
T:               ----------GACTCaTCCTCCGTCAGTGCC-------------------
R:         11   T0203303111121222320220312121130122310321011.113131    31        
--
>437_1271_4149_F3	ENSMUST00000113126	-	2600	2627	14	41	50	166	2x2T2x11x6x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X| ||X||||||||||X|||||X|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCaGGG---------
R:         14   T0213020123031031233232011110111201112020001.233113    41        
--
>437_1535_2353_F3	ENSMUST00000113126	-	2594	2620	19	45	50	180	3x10x8x1x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                                   |||X|||||||||X|||||||XX||||
T:               ------------------AGGtGTGGTGTGGtGTCAGGGtgCTGG-----
R:         19   T1302010303131023123202111011110211212003032.213320    45        
--
>437_2191_4608_F3	ENSMUST00000113126	-	91	116	10	35	50	160	2x4x3x2x2x13	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                          ||X|||X||X|X|X||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTC---------------
R:         10   T2330201033131323123022213111121211210112013.300222    35        
--
>437_2451_3059_F3	ENSMUST00000113126	+	2599	2624	17	42	50	166	2x1x2C8x12	
G:       2599    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                 ||XX| ||||||||X|||||||||||
T:               ----------------ACccTCACACCACAcCACACCTCTGT--------
R:         17   T2330201030320131312322111101112011110222113.122013    42        
--
>437_2957_1662_F3	ENSMUST00000113126	-	2602	2620	23	41	50	170	3x16	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                       |||X|||||||||||||||
T:               ----------------------AGGtGTGGTGTGGTGTCAG---------
R:         23   T1212330201030013103312320311101111011121232.312122    41        
--
>437_3467_1184_F3	ENSMUST00000113126	+	2591	2619	9	37	50	170	x3x2x5x1x5x13	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                         X||X|X||||XX||||X||||||||||||
T:               --------tACcCaGCACccTGACaCCACACCACACC-------------
R:          9   T2112010303130323111321213101111011110103002.312310    37        
--
>437_3840_4808_F3	ENSMUST00000113126	-	2601	2620	20	39	50	160	3x14x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||X|||||||||||||X||
T:               -------------------AGGtGTGGTGTGGTGTCaGG-----------
R:         20   T2330203210131132333320311101111011123203022.002332    39        
--
>437_4226_4014_F3	ENSMUST00000113126	-	2601	2627	14	40	50	156	2x2T2x2x9x9	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                              ||X| ||X|X||||||||X||||||||
T:               -------------TAgATAGaGgTGTGGTGTgGTGTCAGG----------
R:         14   T0233020103031031233202311110111201112120323.100213    40        
--
>438_1585_640_F3	ENSMUST00000113126	-	2597	2620	19	42	50	166	3x14x2T4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||||||||X| ||||
T:               ------------------AGGtGTGGTGTGGTGTCaGTGTGC--------
R:         19   T2112010303131023123203111011110111202111133.322231    42        
--
>438_1814_2196_F3	ENSMUST00000113126	-	2600	2617	23	40	50	160	14x4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                       ||||||||||||||X|||
T:               ----------------------TGTGGTGTGGTGTCaGGG----------
R:         23   T2000201030113100311330311101111011120200332.220310    40        
--
>438_1847_3881_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	3x3x13x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTcAG------------
R:         17   T2310201030133132312320311101111011131221033.031012    38        
--
>438_1896_2987_F3	ENSMUST00000113126	+	2604	2620	22	38	50	170	17	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                      |||||||||||||||||
T:               ---------------------GACACCACACCACACCT------------
R:         22   T2310201330030302212320211101111011110232210.233322    38        
--
>438_1962_3733_F3	ENSMUST00000113126	-	2593	2614	17	38	50	200	x22	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAG    2593      
                                 X|||||||||||||||||||||
T:               ----------------gGTGTGGTGTCAGGGTGCTGGG------------
R:         17   T0013313111123223201111011121200113210003332.322222    38        
--
>438_2259_3391_F3	ENSMUST00000113126	+	2593	2620	11	38	50	180	1x3x4x1x3x16	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                           |X||X|||XX||X|||||||||||||||
T:               ----------CcCAgCACccTGaCACCACACCACACCT------------
R:         11   T2330201030030133111321311101111011110232033.132233    38        
--
>438_2269_4151_F3	ENSMUST00000113126	-	2606	2631	9	34	50	160	2x2x1x4x2x15	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                         ||X|XX|||X|X||||||||||||||
T:               --------GGtGtaGACaGaGGTGTGGTGTGGTG----------------
R:          9   T2330202030310122132320111101111011323102103.131020    34        
--
>438_2546_1505_F3	ENSMUST00000113126	+	2604	2621	22	39	50	180	18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                      ||||||||||||||||||
T:               ---------------------GACACCACACCACACCTC-----------
R:         22   T2303201032100330230320211101111011110220323.232121    39        
--
>438_2850_350_F3	ENSMUST00000113126	-	2599	2623	15	39	50	170	3x3x13x2x4	
G:       2623    ATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCC    2599      
                               |||X||X||||||||||||X|X|||
T:               --------------CAGaGGtGTGGTGTGGTGTcAgGGT-----------
R:         15   T1320103031311231232031110111101113100013133.010221    39        
--
>438_3006_3280_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2310201030120102112320311101111011120323102.201030    36        
--
>438_3023_303_F3	ENSMUST00000113126	-	2602	2620	21	39	50	190	19	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTCAG-----------
R:         21   T0323020123031011213232011110111101112123331.120132    39        
--
>438_3029_2921_F3	ENSMUST00000113126	-	2595	2626	15	46	50	162	1x2T2x11x8x2C4	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                               |X| ||X||||||||||X|||||||X| ||||
T:               --------------AgATAGaGGTGTGGTGTgGTGTCAGgGCGCTG----
R:         15   T0213020103031011233232011110111201112122033.312102    46        
--
>438_3032_2610_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	10x9	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||X||||||||
T:               ---------------------GACACCACACcACACCTCT----------
R:         22   T2330201030330113012322211101111211110222313.012132    40        
--
>438_3369_2385_F3	ENSMUST00000113126	-	2606	2630	10	34	50	176	4G3x2x15	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                          |||| |||X|X||||||||||||||
T:               ---------GTGTGGACaGaGGTGTGGTGTGGTG----------------
R:         10   T0100201333111102122320111101111011300321312.331333    34        
--
>438_3920_3202_F3	ENSMUST00000113126	+	2592	2625	10	43	50	166	5x1x3x1x2x12x4A2x3	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                          |||||XX||XX|X|||||||||||X||| ||X||
T:               ---------ACCCAgcACccTgACACCACACCAcACCACTgTC-------
R:         10   T2310201330100102111322211101111013110112212.232233    43        
--
>438_4083_2266_F3	ENSMUST00000113126	-	2809	2824	20	35	50	160	16	
G:       2824    TCCGTCAGTGCCTGGAGACGGCTGAACAGATCAGAAGGGAAGCAGTGGTG    2809      
                                    ||||||||||||||||
T:               -------------------GGCTGAACAGATCAGA---------------
R:         20   T2031010303131023123203212011223212210010032.020301    35        
--
>439_1756_1438_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	3x15x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||X||||||||||||||X||
T:               ------------------AGGtGTGGTGTGGTGTCAgGG-----------
R:         19   T2222010303131023123203111011110111210000120.330303    39        
--
>439_2234_3864_F3	ENSMUST00000113126	-	2604	2623	24	43	50	160	x3x17	
G:       2623    AAGAAAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAA    2604      
                                        X||X||||||||||||||||
T:               -----------------------cAGaGGTGTGGTGTGGTGTC-------
R:         24   T1012001133020103001311231232011110111101112.232223    43        
--
>439_2689_4056_F3	ENSMUST00000113126	+	2587	2619	5	37	50	176	9x1x1x1x1G3x6x10	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                     |||||||||XXXX |||X|||||X|||||||||
T:               ----AAGGTACCCagcaGCCTgACACCaCACCACACC-------------
R:          5   T0213302013100231023020211103111011110130022.223123    37        
--
>439_3346_946_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T0233020103031011233232011110111201112123022.202301    39        
--
>439_4059_4626_F3	ENSMUST00000113126	-	2597	2620	19	42	50	180	3x8x9x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||X||||||||X|||
T:               ------------------AGGtGTGGTGTgGTGTCAGGgTGC--------
R:         19   T2330201303131023123203111011120111212021133.033333    42        
--
>440_987_2923_F3	ENSMUST00000113126	-	2061	2095	13	47	50	192	5x1x10x6x2A4T5	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                             |||||XX|||||||||X|||||X| |||| |||||
T:               ------------GAGCTccAACCACAGCtTTTGTaAACTGCTTGTTC---
R:         13   T0013303111121223201101011123100011100121320.202230    47        
--
>440_1451_2208_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T2330301032030303012320311101111011121023032.222220    37        
--
>440_1571_2731_F3	ENSMUST00000113126	-	2602	2620	20	38	50	190	19	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCAG------------
R:         20   T0100201330301102322320111101111011121221332.021322    38        
--
>440_1726_2478_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T3133020103031011233232011110111201112121301.233201    39        
--
>440_2060_2946_F3	ENSMUST00000113126	-	2606	2626	14	34	50	170	1x5x15	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                              |X||||X||||||||||||||
T:               -------------AgACAGaGGTGTGGTGTGGTG----------------
R:         14   T2310201331030212112320111101111011300130332.122311    34        
--
>440_2152_1437_F3	ENSMUST00000113126	-	2604	2623	17	36	50	180	6x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 ||||||X|||||||||||||
T:               ----------------CAGAGGtGTGGTGTGGTGTC--------------
R:         17   T2330201030330112212220311101111011120232332.222132    36        
--
>440_2858_2932_F3	ENSMUST00000113126	-	2594	2620	21	47	50	180	11x6x2x2x6	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                     |||||||||||X|||||X|X|X|||||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGtGCTGG---
R:         21   T0233020123031031233232011110111201112322001.210302    47        
--
>440_3311_4362_F3	ENSMUST00000113126	-	2604	2626	20	42	50	170	1x2x14x6	
G:       2626    AGAAAGAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAA    2604      
                                    |X|X|||||||||||||X|||||
T:               -------------------AgAcAGAGGTGTGGTGTgGTGTC--------
R:         20   T2302333102201030013212312220111101112011122.223220    42        
--
>440_3343_2167_F3	ENSMUST00000113126	-	2605	2627	13	35	50	210	7x16	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             |||||||X|||||||||||||||
T:               ------------TAGACAGaGGTGTGGTGTGGTGT---------------
R:         13   T2310201330300322112320111101111011100123302.101330    35        
--
>441_799_3379_F3	ENSMUST00000113126	-	2599	2620	20	41	50	180	x15x7	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                    X||||||||||||||X||||||
T:               -------------------aGGTGTGGTGTGGTGtCAGGGT---------
R:         20   T2020123031011231230320111101111011321200120.220312    41        
--
>441_830_3758_F3	ENSMUST00000113126	-	2595	2622	19	46	50	170	2x11x5x3x3x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                   ||X||||||||||X||||X||X||X|||
T:               ------------------AGaGGTGTGGTGTgGTGTcAGgGTgCTG----
R:         19   T1303020103031031233232011110111201113121012.111223    46        
--
>441_1081_2409_F3	ENSMUST00000113126	-	2060	2099	9	48	50	196	1x8x1x2x13x4x1x1C3x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X|||||||XX|X||||||||||||X|||XX |||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAATctCCCTgTTCA--
R:          9   T0013303111122223201111011123200013303102002.302113    48        
--
>441_1298_3387_F3	ENSMUST00000113126	+	2601	2625	19	43	50	196	1x2T21	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                   |X| |||||||||||||||||||||
T:               ------------------CcTTACACCACACCACACCTCTGTC-------
R:         19   T2320221030031300211320311101111011110222112.222323    43        
--
>441_1962_1523_F3	ENSMUST00000113126	-	2600	2628	12	40	50	176	1x2A4x3x14x4	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                            |X| ||||X||X|||||||||||||X|||
T:               -----------GtAAACAGaGGtGTGGTGTGGTGTCaGGG----------
R:         12   T2330201030030300112320311101111011120200220.231310    40        
--
>441_1963_1953_F3	ENSMUST00000113126	-	719	753	2	36	50	170	1x2x4x5x1x4x2x5x2x9	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X||||XX|||X|X||||X|X||||||||
T:               -CaGcAATaTGCAggCAGtAgGCACtGaCATTGTCA--------------
R:          2   T1302010303131323120310311311113011210233112.301232    36        
--
>441_2047_2845_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	11x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||||||||||X||||||
T:               --------------------AGGTGTGGTGTgGTGTCA------------
R:         21   T0313020133031011233232011110111201112133333.302022    38        
--
>441_2088_3246_F3	ENSMUST00000113126	-	2604	2623	17	36	50	180	3x17	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||||||||||||||||
T:               ----------------CAGaGGTGTGGTGTGGTGTC--------------
R:         17   T2330201030330102312320111101111011120213333.322323    36        
--
>441_2490_2822_F3	ENSMUST00000113126	-	2600	2622	19	41	50	170	2x11x6x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||X|||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGGG---------
R:         19   T0313020103031011213232011110111201112020002.003013    41        
--
>441_3183_2994_F3	ENSMUST00000113126	-	2596	2620	19	43	50	156	3x14x2x2A3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||||||||||||X|X| |||
T:               ------------------AGGtGTGGTGTGGTGTCaGgGAGCT-------
R:         19   T3102010303131023123203111011110111202302232.330321    43        
--
>441_3211_962_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2312201332000303031320311101111011110220203.333323    39        
--
>441_3299_2102_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	5x2x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             |||||X|X||X|||||||||||||
T:               ------------TAGACaGaGGtGTGGTGTGGTGTC--------------
R:         13   T2312201030130322132320311101111011120011003.112331    36        
--
>441_3945_1720_F3	ENSMUST00000113126	-	2602	2627	14	39	50	160	2x2x3x3x13x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||X||X||||||||||||X||
T:               -------------TAgAcAGaGGtGTGGTGTGGTGTcAG-----------
R:         14   T1333020103031031201232031110111101110122333.321022    39        
--
>441_4023_3537_F3	ENSMUST00000113126	-	2602	2625	17	40	50	160	5x2x1x10x6	
G:       2625    AGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAA    2602      
                                 |||||X|XX|||||||||X|||||
T:               ----------------GACAGaGgtGTGGTGTGGtGTCAG----------
R:         17   T3301302010302331021123233111011110211212323.030010    40        
--
>442_251_3230_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	3x13x5x2x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                |||X||||||||||||X||||X|X||
T:               ---------------GACaGAGGTGTGGTGTgGTGTcAgGG---------
R:         16   T02130201130310312132220111101112011101300322322311    41        
--
>442_1462_1017_F3	ENSMUST00000113126	-	2600	2623	20	43	50	180	x14x6x4	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                    X|||||||||||||X|||||X|||
T:               -------------------cAGAGGTGTGGTGTgGTGTCaGGG-------
R:         20   T12323302010303131023122201111011120111202000100030    43        
--
>442_1645_1645_F3	ENSMUST00000113126	-	2602	2627	22	47	50	180	2x8x10x2x4	
G:       2627    GAAAGAAAGAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTG    2602      
                                      ||X|||||||X|||||||||X|X|||
T:               ---------------------TAgACAGAGGtGTGGTGTGGtGtCAG---
R:         22   T31210132232332010003133321122203111011110212212332    47        
--
>442_1650_3310_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T23303010021003002213203111011110111102203022233322    39        
--
>442_1854_1850_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	5x14	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  |||||X|||||||||||||
T:               -----------------AGAGGtGTGGTGTGGTGTC--------------
R:         18   T10322010303231300322203111011110111231203232031012    36        
--
>442_2277_636_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T23302230302103002333203111011110111102223023223232    40        
--
>442_2495_2634_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	2x6x8x8	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X|||||X|||||||X|||||||
T:               --------------GAcAGAGGtGTGGTGTgGTGTCAG------------
R:         15   T10322010303121023122203111011120111212202011131221    38        
--
>442_2661_4084_F3	ENSMUST00000113126	-	2590	2626	14	50	50	190	4x2x3x13x1x2x3x3x3x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                              ||||X|X||X||||||||||||XX|X||X||X||X||
T:               -------------AGACaGaGGtGTGGTGTGGTGTcaGgGTgCTgGGtAC
R:         14   T23302013303001221323203111011110111102201232200331    50        
--
>442_2661_4084_F3	ENSMUST00000113126	+	2593	2621	11	39	50	182	5x2T1x2T17	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                           |||||X| |X| |||||||||||||||||
T:               ----------CCCAGcATCcTTACACCACACCACACCTC-----------
R:         11   T23302013303001221323203111011110111102201232200331    39        
--
>442_2753_270_F3	ENSMUST00000113126	-	2603	2620	19	36	50	160	3x15	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                                   |||X||||||||||||||
T:               ------------------AGGtGTGGTGTGGTGTCA--------------
R:         19   T12120103031310231232001110111101112101010223320022    36        
--
>442_2803_3260_F3	ENSMUST00000113126	-	2604	2623	20	39	50	160	3x3x14	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAA    2604      
                                    |||X||X|||||||||||||
T:               -------------------CAGaGGtGTGGTGTGGTGTC-----------
R:         20   T02123302210300331033123203111011110111230322222220    39        
--
>442_2948_4024_F3	ENSMUST00000113126	+	2602	2628	20	46	50	170	x6x13x2x1x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                    X|||||X||||||||||||X|XX||||
T:               -------------------cTGACAcCACACCACACCTcTgtCTAC----
R:         20   T33233023303001311231212113011110111102322322313023    46        
--
>442_3026_1673_F3	ENSMUST00000113126	+	2604	2622	22	40	50	190	19	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |||||||||||||||||||
T:               ---------------------GACACCACACCACACCTCT----------
R:         22   T10331010302102000113232111011110111102223110002203    40        
--
>442_3163_136_F3	ENSMUST00000113126	-	2601	2623	14	36	50	170	3x3x12x5	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATCCC    2601      
                              |||X||X|||||||||||X||||
T:               -------------CAGaGGtGTGGTGTGGTGtCAGG--------------
R:         14   T22010303131123123203111011110110212033230200330302    36        
--
>442_3326_37_F3	ENSMUST00000113126	-	2601	2625	16	40	50	190	2x3x11x9	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                ||X||X||||||||||X||||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAGG----------
R:         16   T02330201032010112312320111101112011121202200331323    40        
--
>442_3891_1259_F3	ENSMUST00000113126	-	2603	2620	21	38	50	180	18	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     ||||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTCA------------
R:         21   T02330201030310302032320111101111011121332203102100    38        
--
>442_4008_3603_F3	ENSMUST00000113126	-	2602	2627	22	47	50	180	4x2x11x1x8	
G:       2627    GAAAGAAAGAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTG    2602      
                                      ||||X|X||||||||||XX|||||||
T:               ---------------------TAGAcAgAGGTGTGGTGtgGTGTCAG---
R:         22   T01113022213322010003123223112201111011320111212120    47        
--
>442_4115_2793_F3	ENSMUST00000113126	+	2604	2628	22	46	50	176	3x11x5A5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                      |||X||||||||||X|||| |||||
T:               ---------------------GACaCCACACCACAcCTCTATCTAC----
R:         22   T21102010303101323123202131011110111202223322312330    46        
--
>443_405_3638_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x10x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||X|||||
T:               --------CtGAGAGCTccAaCCACAGCTTtTGTAA--------------
R:          9   T0013303111122223201111011123203011301122032232022.    36        
--
>443_702_3587_F3	ENSMUST00000113126	-	2596	2623	18	45	50	180	1x2x11x8x2x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |X|X||||||||||X|||||||X|X|||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAGgGtGCT-----
R:         18   T0233020103031011203232011110111201112123001322202.    45        
--
>443_887_1170_F3	ENSMUST00000113126	-	2597	2625	16	44	50	170	3x2x11x4x2x4x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                |||X|X||||||||||X|||X|X|||X||
T:               ---------------GACaGaGGTGTGGTGTgGTGtCaGGGtGC------
R:         16   T0323020133031031213232011110111201132220001333020.    44        
--
>443_1035_1412_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	3x8x10	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||X|||||||X|||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGG-----------
R:         19   T2002010303131023123203111011120111212003331303002.    39        
--
>443_1660_4849_F3	ENSMUST00000113126	-	2595	2620	21	46	50	186	11x9x1C4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X||||||||X ||||
T:               --------------------AGGTGTGGTGTgGTGTCAGGgCGCTG----
R:         21   T0233020103031011233232011110111201112120333321100.    46        
--
>443_1669_1141_F3	ENSMUST00000113126	-	2597	2620	19	42	50	166	3x15A1x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||||||||| |X|||
T:               ------------------AGGtGTGGTGTGGTGTCAAGgTGC--------
R:         19   T0202010303131023123203111011110111210211131033303.    42        
--
>443_1874_1617_F3	ENSMUST00000113126	+	2602	2621	20	39	50	180	3x17	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    |||X||||||||||||||||
T:               -------------------CTGaCACCACACCACACCTC-----------
R:         20   T2110201030000300011321311101111011110220310333100.    39        
--
>443_2751_2403_F3	ENSMUST00000113126	-	2604	2627	13	36	50	160	2x3x2x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X||X|X||X|||||||||||||
T:               ------------TAgACaGaGGtGTGGTGTGGTGTC--------------
R:         13   T2310201030110302122320311101111011120012303302232.    36        
--
>443_3140_853_F3	ENSMUST00000113126	-	2597	2620	19	42	50	180	3x12x2x7	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||||||X|X||||||
T:               ------------------AGGtGTGGTGTGGTGtCaGGGTGC--------
R:         19   T2330210303131023123203111011110110202001133321001.    42        
--
>443_3264_2043_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030020102112320311101111011120221102222133.    36        
--
>443_3820_1409_F3	ENSMUST00000113126	-	2604	2627	14	37	50	166	2x2T13x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                              ||X| |||||||||||||X|||||
T:               -------------TAgATAGAGGTGTGGTGTgGTGTC-------------
R:         14   T0233020103031031233222011110111201112332301030023.    37        
--
>443_3974_1782_F3	ENSMUST00000113126	-	2602	2623	16	37	50	180	3x3x16	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||X|||||||||||||||
T:               ---------------CAGaGGtGTGGTGTGGTGTCAG-------------
R:         16   T2112010303131123123203111011110111212200013231023.    37        
--
>444_573_2419_F3	ENSMUST00000113126	+	142	171	14	43	50	180	1x4x4x2x2x12x5	
G:        142    GAGATGGTTCTCATTGATCATGACGTTGACCTAGAGAAGACTCATCCTCC    171       
                              |X|||X|||X|X|X|||||||||||X||||
T:               -------------TtGATcATGaCgTtGACCTAGAGAAgACTC-------
R:         14   T30201030313112312331313111112102322220121223000012    43        
--
>444_1221_2740_F3	ENSMUST00000113126	-	2295	2321	24	50	50	170	5x1x3x1x9x8	
G:       2321    ATCTGTTGGCAGTACACGAGTGATACCAGCACCTGTCTCTCAGATCACAG    2295      
                                        |||||XX||XX||||||||X|||||||
T:               -----------------------TACCAgcACctGTCTCTCAgATCACAG
R:         24   T23302012100021123123202131011111101122222132321112    50        
--
>444_1379_1628_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T02130201230310112332320111101112011121233102300232    39        
--
>444_2535_2889_F3	ENSMUST00000113126	-	2604	2629	11	36	50	180	4x2x6x10x4	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||||X|X|||||X|||||||||X|||
T:               ----------TGTAgAcAGAGGtGTGGTGTGGtGTC--------------
R:         11   T23010011213113023122203111011110311222233111222322    36        
--
>444_2734_2076_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x14x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||X|||
T:               -------------------AGGtGTGGTGTGGTGTCaGGG----------
R:         20   T23302010303101010223203111011110111202002002201332    40        
--
>444_2735_4843_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T02330201030310112332320111101112011123200311222210    41        
--
>444_3777_4617_F3	ENSMUST00000113126	-	2596	2617	25	46	50	180	3x7x12	
G:       2617    AGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTAAAA    2596      
                                         |||X||||||X|||||||||||
T:               ------------------------TGTgGTGTGGtGTCAGGGTGCT----
R:         25   T33233322103012310231232231120111102112120011322123    46        
--
>444_3846_1698_F3	ENSMUST00000113126	-	82	116	10	44	50	176	2x4x3x2x2x13A1x4x3	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGAAATTG    82        
                          ||X|||X||X|X|X|||||||||||| |X|||X||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCAAaTATgAG------
R:         10   T23302010331313231230223131111212112101333022011331    44        
--
>445_1218_414_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T00202010300033320123203111011110111201033002211132    36        
--
>445_1437_3093_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T30102010300031120123203111011110111213232010013030    37        
--
>445_1608_3789_F3	ENSMUST00000113126	-	2600	2620	21	41	50	190	11x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGGG---------
R:         21   T02330201130310312032320111101112011121200331220022    41        
--
>445_1812_4702_F3	ENSMUST00000113126	+	2605	2629	23	47	50	210	11x7x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                       |||||||||||X||||||X||||||
T:               ----------------------ACACCACACCAcACCTCTgTCTACA---
R:         23   T23102013301002020033313111011110101102220122311003    47        
--
>445_1849_3443_F3	ENSMUST00000113126	-	2597	2631	5	39	50	190	2x3x1x3x2x11x4x6x3	
G:       2631    TCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCCT    2597      
                     ||X||XX||X|X||||||||||X|||X|||||X||
T:               ----GGtGTagACaGaGGTGTGGTGTgGTGtCAGGGtGC-----------
R:          5   T00133031111212232011110111201132120031300231211120    39        
--
>445_2107_4420_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x8x1x2x8x2x6x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X|||||||X|X|||||X||
T:               --------CtGAGAGCTccAaCCACAGCtTtTGTAAtCT-----------
R:          9   T00133031111222232011110111230030113012230323310202    39        
--
>445_2225_2804_F3	ENSMUST00000113126	-	2593	2625	14	46	50	170	2x3x3x14x1x1x2x3x4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAATC    2593      
                              ||X||X||X|||||||||||||XXX|X||X|||
T:               -------------GAcAGaGGtGTGGTGTGGTGTCaggGtGCtGGG----
R:         14   T20020103031313231232031110111101112003021301000232    46        
--
>445_2269_1007_F3	ENSMUST00000113126	-	719	746	9	36	50	200	6x4x6x2x10	
G:        746    CCTTCTAAATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                         ||||||X|||X|||||X|X|||||||||
T:               --------ATGCAGgCAGtAGGCAcTgACATTGTCA--------------
R:          9   T23002101031312231223203132221130112112321101233021    36        
--
>445_2595_2566_F3	ENSMUST00000113126	-	2602	2620	19	37	50	170	13x6	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                   |||||||||||||X|||||
T:               ------------------AGGTGTGGTGTGGtGTCAG-------------
R:         19   T31020103031310231232011110111102112123330101312021    37        
--
>445_3150_572_F3	ENSMUST00000113126	-	2602	2625	12	35	50	180	2x6x8x8	
G:       2625    TTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCCC    2602      
                            ||X|||||X|||||||X|||||||
T:               -----------GAcAGAGGtGTGGTGTgGTGTCAG---------------
R:         12   T22010303131323122203111011120111212100321213033232    35        
--
>445_3498_874_F3	ENSMUST00000113126	-	2593	2621	19	47	50	190	1x17x2x3x3x3	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                   |X||||||||||||||||X|X||X||X||
T:               ------------------GaGGTGTGGTGTGGTGTCaGgGTgCTgGG---
R:         19   T23112013300301120313201111011110111202301332200301    47        
--
>445_3915_2645_F3	ENSMUST00000113126	+	2602	2617	20	35	50	160	16	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2617      
                                    ||||||||||||||||
T:               -------------------CTGACACCACACCACA---------------
R:         20   T23102010302302000313212111011110111301322332223231    35        
--
>445_3965_1989_F3	ENSMUST00000113126	-	85	102	26	43	50	160	1x17	
G:        102    TGCTCTGTATTTGAATTTTTAGCAACGTGTGACTGTCGAATATTTGAAAT    85        
                                          |X||||||||||||||||
T:               -------------------------CgTGTGACTGTCGAATAT-------
R:         26   T02130201230310312333323113111112121123203333331132    43        
--
>445_4202_1583_F3	ENSMUST00000113126	+	2594	2620	12	38	50	190	3x4x1x2x17	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                            |||X|||XX|X||||||||||||||||
T:               -----------CCAgCACccTgACACCACACCACACCT------------
R:         12   T33102010300301031113222111011110111102123022021332    38        
--
>446_648_3550_F3	ENSMUST00000113126	-	2598	2620	20	42	50	190	16x1x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                    ||||||||||||||||XX|||||
T:               -------------------AGGTGTGGTGTGGTGTcaGGGTG--------
R:         20   T2332201300310333032320111101111011133200110222213.    42        
--
>446_1076_758_F3	ENSMUST00000113126	-	2595	2623	20	48	50	190	1x3x7x11x4x3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAA    2595      
                                    |X||X||||||X||||||||||X|||X||
T:               -------------------CaGAgGTGTGGtGTGGTGTCAGgGTGcTG--
R:         20   T2011123103302030003302210111103111011121220112212.    48        
--
>446_1639_2309_F3	ENSMUST00000113126	-	2595	2624	16	45	50	206	4x3x13A5x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                ||||X||X|||||||||||| |||||X|||
T:               ---------------ACAGaGGtGTGGTGTGGTGTAAGGGTgCTG-----
R:         16   T2330201030000111112320311101111011130200103211223.    45        
--
>446_1737_4240_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223201111011123200012010032102231213.    33        
--
>446_2559_2349_F3	ENSMUST00000113126	+	2605	2629	23	47	50	190	x17x1x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                       X||||||||||||||||XX||||||
T:               ----------------------aCACCACACCACACCTCtgTCTACA---
R:         23   T2110201030133131012320311101111011110221312231101.    47        
--
>446_2855_1301_F3	ENSMUST00000113126	+	2598	2622	16	40	50	176	3x1x2T18	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                |||XX| ||||||||||||||||||
T:               ---------------CACccTTACACCACACCACACCTCT----------
R:         16   T2310201032030300112320311101111011110222202000223.    40        
--
>446_2869_4165_F3	ENSMUST00000113126	+	2604	2627	22	45	50	180	13x4x2x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      |||||||||||||X|||X|X||||
T:               ---------------------GACACCACACCACaCCTcTgTCTA-----
R:         22   T0310201330100330011320211101111011310212312232203.    45        
--
>446_3030_2260_F3	ENSMUST00000113126	-	2598	2625	15	42	50	186	x5x3x14C5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                               X||||X||X||||||||||||| |||||
T:               --------------gACAGaGGtGTGGTGTGGTGTCCGGGTG--------
R:         15   T2330201030010102112320211101111011120300112333203.    42        
--
>446_3208_3530_F3	ENSMUST00000113126	-	2605	2624	16	35	50	160	4x3x13	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                                ||||X||X||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGT---------------
R:         16   T2030210033133123112320211101111011100132332221233.    35        
--
>446_3789_3320_F3	ENSMUST00000113126	-	2598	2625	12	39	50	180	2x3x3x8x8x4	
G:       2625    TTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATCCC    2598      
                            ||X||X||X|||||||X|||||||X|||
T:               -----------GAcAGaGGtGTGGTGTgGTGTCAGgGTG-----------
R:         12   T2201030313132312320311101112011121220111003232021.    39        
--
>446_4054_1229_F3	ENSMUST00000113126	-	2595	2620	21	46	50	180	11x6x2x2x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X|||||X|X|X||||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGtGCTG----
R:         21   T0233020103031011233232011110111201112022021321220.    46        
--
>447_830_1102_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T0013303111123223201111011123200012301132032132022.    36        
--
>447_1024_4126_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x2x13x1x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||X|X||||||||||||XX||||
T:               --------CtGAgAGCTcCaACCACAGCTTTTgtAATC------------
R:          9   T0013303111123223200001011123200023303230010300111.    38        
--
>447_1178_2355_F3	ENSMUST00000113126	-	2596	2623	17	44	50	172	6x12x3C2G3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 ||||||X|||||||||||X|| || |||
T:               ----------------CAGAGGtGTGGTGTGGTGtCACGGGGCT------
R:         17   T2330201032100131012220011101111011221130003221112.    44        
--
>447_1552_2710_F3	ENSMUST00000113126	-	2596	2620	19	43	50	170	3x8x8x1x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||||||X|||||||XX||||
T:               ------------------AGGtGTGGTGTgGTGTCAGggTGCT-------
R:         19   T2002010303131023123203111011120111212231132330032.    43        
--
>447_1822_2933_F3	ENSMUST00000113126	-	2599	2627	14	42	50	190	2x2x6x8x8x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                              ||X|X|||||X|||||||X|||||||X||
T:               -------------TAgAcAGAGGtGTGGTGTgGTGTCAGgGT--------
R:         14   T0233020103031031231222031110111201112122012332033.    42        
--
>447_1913_2050_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2330201030100100003320311101111011110220303002110.    39        
--
>447_2990_1977_F3	ENSMUST00000113126	-	2594	2620	23	49	50	170	3x2x6x8x2x6	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGA    2594      
                                       |||X|X|||||X|||||||X|X|||||
T:               ----------------------AGGtGtGGTGTgGTGTCAGgGtGCTGG-
R:         23   T1102330201030033103312320312101112011121210013210.    49        
--
>447_3280_2741_F3	ENSMUST00000113126	-	2594	2625	16	47	50	186	2x3x11x7x2x1A5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                ||X||X||||||||||X||||||X|X |||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAgGgAGCTGG---
R:         16   T1033020103031031231232011110111201112130322321020.    47        
--
>447_3986_3937_F3	ENSMUST00000113126	-	2594	2618	23	47	50	170	9x8x2x1x5	
G:       2618    GAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                       |||||||||X|||||||X|XX||||
T:               ----------------------GTGTGGTGTgGTGTCAGgGtgCTGG---
R:         23   T0233020103031011230232311110111201112121023321021.    47        
--
>448_1446_2373_F3	ENSMUST00000113126	-	2446	2469	7	30	50	180	1x11x7x5	
G:       2469    AGGGTCAGCAGCGTCTGGCTCCACAGCAGGAGATCGACGTCTACCTCCCC    2446      
                       |X||||||||||X||||||X||||
T:               ------AgCAGCGTCTGGcTCCACAgCAGG--------------------
R:          7   T33013323312331221022201111312000113030211233233102    30        
--
>448_1866_3036_F3	ENSMUST00000113126	+	2605	2630	23	48	50	180	12x6x1x1x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                       ||||||||||||X|||||XXX|||||
T:               ----------------------ACACCACACCACaCCTCTgtcTACAC--
R:         23   T23102010301003011213203111011110113102220332311122    48        
--
>448_2082_4744_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T02030201030310312332320111101112011121210322211312    39        
--
>448_2119_2181_F3	ENSMUST00000113126	+	2593	2627	11	45	50	182	1x3x3x1G2x13T5x5	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                           |X||X||X ||X|||||||||||| |||||X||||
T:               ----------CcCAgCAcGCTgACACCACACCACTCCTCTgTCTA-----
R:         11   T23102010302301031333202111011110112202220122321032    45        
--
>448_2172_1171_F3	ENSMUST00000113126	-	2632	2656	23	47	50	176	2x5T6x11	
G:       2656    AAACCAGATCAAATGCAAAAATCATGGTGAGGTCTGCAGAGGCATCTAAC    2632      
                                       ||X|||| ||||||X||||||||||
T:               ----------------------CAtGGTGTGGTCTGcAGAGGCATCT---
R:         23   T13302010002303302323203111011110122101222031322002    47        
--
>448_2314_1245_F3	ENSMUST00000113126	-	2600	2623	14	37	50	180	3x3x12x6	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCC    2600      
                              |||X||X|||||||||||X|||||
T:               -------------CAGaGGtGTGGTGTGGTGtCAGGG-------------
R:         14   T22010303131123123203111011110113212000033313122203    37        
--
>448_2507_3932_F3	ENSMUST00000113126	+	2601	2622	19	40	50	180	1x18x3	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                   |X|||||||||||||||||X||
T:               ------------------CcTGACACCACACCACACCtCT----------
R:         19   T23302110303102033323212111011110111103222010212331    40        
--
>448_2790_1844_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x6x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||X|||
T:               --------------------AGGTGTGGTGTgGTGTCaGGG---------
R:         21   T02130201030310312332320111101112011120200233302132    41        
--
>448_3861_4274_F3	ENSMUST00000113126	-	2602	2631	18	47	50	160	2x2x4x3x3x8x2x6	
G:       2631    GAAAGAAAGAAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTG    2602      
                                  ||X|X|||X||X||X|||||||X|X|||||
T:               -----------------GGtGtAGAcAGaGGtGTGGTGTgGtGTCAG---
R:         18   T32331112113320010003103223121203111011120211212103    47        
--
>448_3966_810_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	14x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||||||X||||
T:               ---------------------GACACCACACCACAcCTCT----------
R:         22   T23302013303301021123202111011110111302223330223311    40        
--
>449_2837_2523_F3	ENSMUST00000113126	-	2605	2626	14	35	50	180	6x2x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              ||||||X|X|||||||||||||
T:               -------------AGACAGaGgTGTGGTGTGGTGT---------------
R:         14   T23102010301002221123211111011110111003301322331022    35        
--
>450_428_4904_F3	ENSMUST00000113126	-	2598	2627	14	43	50	180	2x2x14x5x1x2x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                              ||X|X|||||||||||||X||||XX|X|||
T:               -------------TAgAcAGAGGTGTGGTGTgGTGTcaGgGTG-------
R:         14   T0233020103031031231222011110111201110222011031020.    43        
--
>450_631_2714_F3	ENSMUST00000113126	-	2602	2620	20	38	50	190	19	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCAG------------
R:         20   T3330201030000000012320111101111011121232000231233.    38        
--
>450_869_3339_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	15x1x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       |||||||||||||||XX|||||
T:               ----------------------ACACCACACCACACCtcTGTCT------
R:         23   T2010201032200100012320311101111011110032112202222.    44        
--
>450_1209_3386_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T0233020103031011233232011110111201112122331232220.    39        
--
>450_1550_383_F3	ENSMUST00000113126	-	1508	1531	26	49	50	180	2x12x7x3	
G:       1531    AGCCACAGTCAGTGAGATCGTGCTCGCTCGGGCAGTGCTCGCTCGTGATC    1508      
                                          ||X|||||||||||X||||||X||
T:               -------------------------GCtCGGGCAGTGCTcGCTCGTgAT-
R:         26   T0213020123031030223330211331230031211321332231223.    49        
--
>450_1568_2974_F3	ENSMUST00000113126	-	544	562	25	43	50	170	10x9	
G:        562    CCTCTTACCGGTGCCTGCTGTGGAGTTGTACCCACATGACCCTGCTGCTG    544       
                                         ||||||||||X||||||||
T:               ------------------------GTTGTACCCAcATGACCCT-------
R:         25   T3120022003031311211222311101131001213121002302222.    43        
--
>450_2174_4226_F3	ENSMUST00000113126	+	1215	1244	15	44	50	166	13x2x3G3x3x2x3	
G:       1215    CATTCAAAGTCAGCATGATCCACAGACTGCGATTCACGACGGATGTGCAG    1244      
                               |||||||||||||X|X|| |||X||X|X||
T:               --------------ATGATCCACAGACtGcGAGTCAcGAcGgAT------
R:         15   T1302010303131323123201112211123221210322322322310.    44        
--
>450_2739_3224_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	x18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       X|||||||||||||||||
T:               ----------------------aCACCACACCACACCTCT----------
R:         23   T2330201030200330232320311101111011110222031000012.    40        
--
>450_2904_2661_F3	ENSMUST00000113126	+	2593	2621	11	39	50	170	2x2x4x1x3x13x4	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                           ||X|X|||XX||X||||||||||||X|||
T:               ----------CCcAgCACccTGaCACCACACCACAcCTC-----------
R:         11   T3010201030003133112321311101111011120223000202332.    39        
--
>450_3130_4359_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	12x5x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       ||||||||||||X||||X||||
T:               ----------------------ACACCACACCACaCCTCtGTCT------
R:         23   T1320223332220300201320311101111011310220112212002.    44        
--
>450_3268_186_F3	ENSMUST00000113126	-	2604	2625	15	36	50	200	5x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||||||||||||||||
T:               --------------GACAGaGGTGTGGTGTGGTGTC--------------
R:         15   T2330201030310102112320111101111011120330302323232.    36        
--
>450_3282_1623_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	x3x18	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  X||X|||||||||||||||||
T:               -----------------cAGaGGTGTGGTGTGGTGTCA------------
R:         18   T1333020103031011231232011110111101112133121332132.    38        
--
>450_3387_394_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	2x6x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               ||X|||||X||||||||||||
T:               --------------GAcAGAGGtGTGGTGTGGTGT---------------
R:         15   T2330201030300112312220211101111011131333232323323.    35        
--
>450_3388_455_F3	ENSMUST00000113126	-	907	939	17	49	50	190	7x2x12x1x2x2x3x4	
G:        939    CAGGCAGATTACAAAATTGTGTTGTCTACTTGGATAAGGGAGAATCCATG    907       
                                 |||||||X|X|||||||||||XX|X|X||X|||
T:               ----------------TTGTGTTgTcTACTTGGATAAggGaGaATcCAT-
R:         17   T0013303111121223201111021023120102330320020031013.    49        
--
>450_3410_1970_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T0233020113031011231232011110111201112122321330222.    39        
--
>450_3411_2564_F3	ENSMUST00000113126	-	2596	2622	19	45	50	176	2x11x6x2C5	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                   ||X||||||||||X|||||X| |||||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGCGTGCT-----
R:         19   T0233020103031031203232011110111201112023311322232.    45        
--
>450_3490_3042_F3	ENSMUST00000113126	-	2602	2627	14	39	50	186	2x2x14C7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||||||||||||| |||||||
T:               -------------TAgAcAGAGGTGTGGTGTCGTGTCAG-----------
R:         14   T1303020103031331201222011110111231112123330221230.    39        
--
>450_3520_4060_F3	ENSMUST00000113126	-	772	792	6	26	50	170	10x7x4	
G:        792    TGCATCCAGTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    772       
                      ||||||||||X||||||X|||
T:               -----CCAGTGGCGGaAAATCCgTGT------------------------
R:          6   T1022030121103300000320011101133011103031122231232.    26        
--
>450_3718_1481_F3	ENSMUST00000113126	-	2595	2625	14	44	50	170	2x3x3x12x2x2x4x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                              ||X||X||X|||||||||||X|X|X|||X||
T:               -------------GAcAGaGGtGTGGTGTGGTGtCaGgGTGcTG------
R:         14   T3102010303131323123203111011110110202301112132102.    44        
--
>450_4237_3801_F3	ENSMUST00000113126	-	718	750	5	37	50	182	17x2G1x2x2T4x3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                     |||||||||||||||||X| |X|X| ||||X||
T:               ----CAATATGCAGGCAGTAGgCGCtGaCTTTGTcAT-------------
R:          5   T2323210333131203121322333111120011313221003223123.    37        
--
>451_1472_2147_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2330201030200300211320311101111011110222001303012.    40        
--
>451_1527_3560_F3	ENSMUST00000113126	+	2605	2628	23	46	50	160	12x4x2x2x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                       ||||||||||||X|||X|X|X|||
T:               ----------------------ACACCACACCACaCCTcTgTcTAC----
R:         23   T2310231330130130023320311101111011310232310231222.    46        
--
>451_2030_4684_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	2x3x2x16	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             ||X||X|X|||||||||||||||
T:               ------------TAgACaGaGGTGTGGTGTGGTGT---------------
R:         13   T2310201030110332132320111101111011100222133333221.    35        
--
>451_2565_1424_F3	ENSMUST00000113126	-	81	110	16	45	50	172	3x1C2x16x1T5	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCAATTG    81        
                                |||X ||X|||||||||||||||X |||||
T:               ---------------ACTgCTCaCGTGTGACTGTCGAAtTTGAGC-----
R:         16   T2002010303131023123322213111121211232020012230021.    45        
--
>451_3036_2484_F3	ENSMUST00000113126	-	2596	2626	15	45	50	176	1x2x3x11x7A2x4	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                               |X|X||X||||||||||X|||||| ||X|||
T:               --------------AgAcAGaGGTGTGGTGTgGTGTCAAGGtGCT-----
R:         15   T0213020103031011231212011110111201112102001322202.    45        
--
>451_3103_992_F3	ENSMUST00000113126	-	2596	2623	18	45	50	186	x3x11x9C4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  X||X||||||||||X|||||||| ||||
T:               -----------------cAGaGGTGTGGTGTgGTGTCAGGCTGCT-----
R:         18   T2213020103031011231232011110111201112120321322320.    45        
--
>451_3175_4869_F3	ENSMUST00000113126	-	2600	2627	14	41	50	166	2x2T2x11x2x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X| ||X||||||||||X|X|||||||
T:               -------------TAgATAGaGGTGTGGTGTgGtGTCAGGG---------
R:         14   T0323020103031031233232011110111203112120032220333.    41        
--
>451_3206_3467_F3	ENSMUST00000113126	-	2602	2624	23	45	50	170	1x3x3x16	
G:       2624    AAGAAAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAA    2602      
                                       |X||X||X|||||||||||||||
T:               ----------------------AcAGaGGtGTGGTGTGGTGTCAG-----
R:         23   T2301123233022303001311331232031110111101112122321.    45        
--
>451_3378_1262_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	x4x3x14x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                X|||X||X|||||||||||||X|||
T:               ---------------aCAGaGGtGTGGTGTGGTGTCaGGG----------
R:         16   T2310201030030003112320311101111011120200332233030.    40        
--
>451_3526_2033_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	5x13x3	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    |||||X||||||||||||X||
T:               -------------------CTGACaCCACACCACACCtCT----------
R:         20   T1003023302000300001221213101111011110122232030233.    40        
--
>451_3560_365_F3	ENSMUST00000113126	-	2592	2620	21	49	50	176	11x5x1x1C2x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                                     |||||||||||X||||XX ||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTcaCGGtGCTGGGT-
R:         21   T0213020103031011231232011110111201110013021321001.    49        
--
>451_3651_2765_F3	ENSMUST00000113126	-	2059	2099	9	49	50	176	1x3x5x1x2x8x8A3x1x1x1x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2059      
                         |X||X||||XX|X|||||||X||||||| |||XXXX|||||
T:               --------CtGAgAGCTccAaCCACAGCtTTTGTAAACTGcctgTTCAA-
R:          9   T0013303111123223201111011123100011300121133310210.    49        
--
>451_4174_1018_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x1x18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||XX|||||||||||||||||
T:               -------------------CTgaCACCACACCACACCTCT----------
R:         20   T2213020133032001203222311101111011110222303320111.    40        
--
>452_30_1579_F3	ENSMUST00000113126	-	1188	1201	1	14	50	140	14	
G:       1201    GACTTGTAATGGTGCTCAGCCGTGTGTCCTGCCTGGCAGTCCCAGCAAGA    1188      
                 ||||||||||||||
T:               GACTTGTAATGGTG------------------------------------
R:          1   T12120113031011231..323..031..20...22...02...11....    14        
--
>452_138_4985_F3	ENSMUST00000113126	-	2599	2623	18	42	50	210	3x11x11	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |||X||||||||||X||||||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAGGGT--------
R:         18   T0323020103031311231232011110111201112120012331312.    42        
--
>452_867_3337_F3	ENSMUST00000113126	+	766	798	1	33	50	176	4x2x3T1x11x2x6x3	
G:        766    AGGTCGACACGGATTTTCCGCCACTGGATTCCAATGAGCCCATTCATAAG    798       
                 ||||X|X|| |X||||||||||X|X|||||X||
T:               AGGTcGaCATGgATTTTCCGCCaCtGGATTcCA-----------------
R:          1   T3201030113132300020330013102300011210013133232122.    33        
--
>452_2136_4631_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T0213020103031011231232011110111201112123332000311.    39        
--
>452_2166_4241_F3	ENSMUST00000113126	-	731	750	5	24	50	180	9x11	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    731       
                     |||||||||X||||||||||
T:               ----CAATATGCAgGCAGTAGGCA--------------------------
R:          5   T2000010333131103121320313101110010210103000222130.    24        
--
>452_2575_4713_F3	ENSMUST00000113126	-	2596	2623	17	44	50	186	3x3x14x2A5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 |||X||X|||||||||||||X| |||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGAGTGCT------
R:         17   T2310201030030102212320311101111011120222113202033.    44        
--
>452_2575_4713_F3	ENSMUST00000113126	+	2605	2624	23	42	50	180	13x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                       |||||||||||||X||||||
T:               ----------------------ACACCACACCACAcCTCTGT--------
R:         23   T2310201030030102212320311101111011120222113202033.    42        
--
>452_2602_1881_F3	ENSMUST00000113126	-	2599	2617	25	43	50	170	10x9	
G:       2617    AGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTAAAAAAA    2599      
                                         ||||||||||X||||||||
T:               ------------------------TGTGGTGTGGtGTCAGGGT-------
R:         25   T0023302013300031023123233111011110211212001030003.    43        
--
>452_3263_2346_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	14x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||||||X||||
T:               ---------------------GACACCACACCACAcCTCT----------
R:         22   T2330201030030100112322211101111011120222022321232.    40        
--
>452_3781_678_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x14x2x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||||X|X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGgGT---------
R:         17   T2030201330010102212320311101111011120220100022331.    41        
--
>452_3959_4137_F3	ENSMUST00000113126	-	2596	2622	19	45	50	170	2x11x6x2x2x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                   ||X||||||||||X|||||X|X|X|||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGgGtGCT-----
R:         19   T0233020103031001233232011110111201112223021323031.    45        
--
>452_4001_2621_F3	ENSMUST00000113126	-	2602	2622	21	41	50	170	2x3x16	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                     ||X||X|||||||||||||||
T:               --------------------AGaGGtGTGGTGTGGTGTCAG---------
R:         21   T3122330201030013131332320311101111011121232202220.    41        
--
>453_653_2886_F3	ENSMUST00000113126	-	2597	2620	20	43	50	166	3x14C1x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X||||||||||||| |X||||
T:               -------------------AGGtGTGGTGTGGTGTCCGgGTGC-------
R:         20   T23303010300000312123203111011110111203301131123332    43        
--
>453_846_152_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23101210300300000123203111011110111211220320222302    37        
--
>453_1800_2163_F3	ENSMUST00000113126	-	81	103	23	45	50	196	13T9	
G:        103    CTCTGTATTTGAATTTTTAGCAACGTGTGACTGTCGAATATGAGCAATTG    81        
                                       ||||||||||||| |||||||||
T:               ----------------------ACGTGTGACTGTCTAATATGAGC-----
R:         23   T23230103031311231233222131111212112230333122300131    45        
--
>453_2581_1140_F3	ENSMUST00000113126	+	2589	2621	7	39	50	176	2x1x5x4x1x2T13x4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                       ||XX||||X|||XX| |||||||||||||X|||
T:               ------GGtaCCCAgCACccTTACACCACACCACAcCTC-----------
R:          7   T23302010301001031123203111011110111002200333332001    39        
--
>453_2667_1887_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	15x1x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    |||||||||||||||XX||||
T:               -------------------CTGACACCACACCACacCTCT----------
R:         20   T23302110303301033123212111011110113202222332223332    40        
--
>453_2808_5049_F3	ENSMUST00000113126	-	2598	2623	17	42	50	200	1x2x5x18	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                 |X|X||||X|||||||||||||||||
T:               ----------------CaGaGGTGtGGTGTGGTGTCAGGGTG--------
R:         17   T01002013303211023223201101011110111212001120020022    42        
--
>453_3366_2446_F3	ENSMUST00000113126	+	2594	2621	12	39	50	172	x5x2G2T17	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            X||||X| || |||||||||||||||||
T:               -----------cCAGCaCGCTTACACCACACCACACCTC-----------
R:         12   T03302010300301230133203111011110111102200033212102    39        
--
>454_318_1597_F3	ENSMUST00000113126	+	2605	2625	23	43	50	190	x21	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       X||||||||||||||||||||
T:               ----------------------aCACCACACCACACCTCTGTC-------
R:         23   T1020131230200233020320311101111011110222112.222232    43        
--
>454_618_3839_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x7x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X||||||X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGG---------
R:         18   T0233020103031311231232011110111201112110003.102320    41        
--
>454_1184_3190_F3	ENSMUST00000113126	-	2596	2626	15	45	50	186	1x2T2x17x4x4	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                               |X| ||X||||||||||||||||X|||X|||
T:               --------------AgATAGaGGTGTGGTGTGGTGTCaGGGtGCT-----
R:         15   T2103020103031011233232011110111101112020021.020221    45        
--
>454_1476_4337_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x14x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X|||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTaAT-------------
R:          9   T0013303111122223201111011123200011203320032.312332    37        
--
>454_1612_3115_F3	ENSMUST00000113126	-	2601	2622	18	39	50	160	2x3x12x5	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  ||X||X|||||||||||X||||
T:               -----------------AGaGGtGTGGTGTGGTGtCAGG-----------
R:         18   T2330201030030100032320311101111011221203030.222100    39        
--
>454_1693_3519_F3	ENSMUST00000113126	-	2604	2627	14	37	50	166	2x2T13x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                              ||X| |||||||||||||X|||||
T:               -------------TAgATAGAGGTGTGGTGTgGTGTC-------------
R:         14   T0233020103031031233222011110111201112023330.220122    37        
--
>454_2568_741_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201032133112312320311101111011123223222.211333    36        
--
>454_2573_3541_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x14x1x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X|||||||||||||XX|||||
T:               -----------------CAGaGGTGTGGTGTGGTgtCAGGG---------
R:         18   T1303020103031330231232011110111101232120032.222122    41        
--
>454_2696_4898_F3	ENSMUST00000113126	-	2600	2625	16	41	50	186	2x14C3x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||||||||||||| |||X|||||
T:               ---------------GAcAGAGGTGTGGTGTCGTGtCAGGG---------
R:         16   T0213020103031311231222011110111231102120003.221222    41        
--
>454_2931_2822_F3	ENSMUST00000113126	-	2594	2631	8	45	50	216	2x2C3x3x3x12x2x10	
G:       2631    AATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                        ||X| |||X||X||X|||||||||||X|X|||||||||
T:               -------GGtGCAGAcAGaGGtGTGGTGTGGTGtCaGGGTGCTGG-----
R:          8   T2300201303131223123203111011110110202001132.231000    45        
--
>454_3138_1733_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T0213020103030203223330311101111011110222003.010332    40        
--
>454_3182_1837_F3	ENSMUST00000113126	-	2597	2623	14	40	50	170	3x3x8x8x2x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCC    2597      
                              |||X||X|||||||X|||||||X|X||
T:               -------------CAGaGGtGTGGTGTgGTGTCAGgGtGC----------
R:         14   T2201030313112312320311101112011121210313032.231213    40        
--
>454_3822_1381_F3	ENSMUST00000113126	+	2598	2620	16	38	50	170	3x1x2x17	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                |||XX|X||||||||||||||||
T:               ---------------CACccTgACACCACACCACACCT------------
R:         16   T2310201032100302111320211101111011110232203.312022    38        
--
>455_1445_3583_F3	ENSMUST00000113126	-	2596	2620	19	43	50	170	3x8x9x1x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||||||X||||||||XX|||
T:               ------------------AGGtGTGGTGTgGTGTCAGGgtGCT-------
R:         19   T31020103031310231232031110111201112120201323330302    43        
--
>455_3186_4367_F3	ENSMUST00000113126	-	2600	2627	14	41	50	186	2x2T2x11x10	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X| ||X||||||||||X|||||||||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCAGGG---------
R:         14   T02330201030310312332320111101112011121200311302032    41        
--
>455_3237_1446_F3	ENSMUST00000113126	+	2605	2628	23	46	50	166	16A1x1x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                       |||||||||||||||| |XX||||
T:               ----------------------ACACCACACCACACCTATgtCTAC----
R:         23   T23102010310100022323203111011110111102332322312333    46        
--
>455_3581_2229_F3	ENSMUST00000113126	-	2597	2629	12	44	50	210	2x2x2x3x3x18x3	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                            ||X|X|X||X||X|||||||||||||||||X||
T:               -----------TGtAgAcAGaGGtGTGGTGTGGTGTCAGGGtGC------
R:         12   T31230201030313312212320311101111011121200213300323    44        
--
>455_3620_1950_F3	ENSMUST00000113126	-	2595	2622	18	45	50	180	2x15x2x2x3x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                  ||X||||||||||||||X|X|X||X|||
T:               -----------------AGaGGTGTGGTGTGGTGtCaGgGTgCTG-----
R:         18   T01002013300011300223201111011110113202201332122010    45        
--
>456_1269_3526_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x9x7	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X||||||||X||||||
T:               ------------GAGCTccAaCCACAGCTtTTGTAA--------------
R:         13   T00133031111212232031110111232300113001310321201111    36        
--
>456_1906_3054_F3	ENSMUST00000113126	-	2600	2622	18	40	50	170	2x11x7x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                  ||X||||||||||X||||||X||
T:               -----------------AGaGGTGTGGTGTgGTGTCAgGG----------
R:         18   T01002013303111023223201111011120111210003003313200    40        
--
>456_2076_402_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	1x2x18	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |X|X|||||||||||||||||
T:               ----------------CaGaGGTGTGGTGTGGTGTCA-------------
R:         17   T01003013111211133223201111011110111210220322300321    37        
--
>457_1066_1072_F3	ENSMUST00000113126	-	2597	2622	19	44	50	180	2x11x5x3x5	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                   ||X||||||||||X||||X||X||||
T:               ------------------AGaGGTGTGGTGTgGTGTcAGgGTGC------
R:         19   T02330201030313312332320111101112011101230113321212    44        
--
>457_2089_2963_F3	ENSMUST00000113126	-	2598	2620	21	43	50	170	3x8x8x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAA    2598      
                                     |||X|||||||X|||||||X|||
T:               --------------------AGGtGTGGTGTgGTGTCAGgGTG-------
R:         21   T02130201030310112312320311101112011121230110231122    43        
--
>457_2865_82_F3	ENSMUST00000113126	-	2596	2625	16	45	50	180	2x3x3x8x9x2x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                ||X||X||X|||||||X||||||||X|X||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGGgTgCT-----
R:         16   T31330201030313312312320311101112011121203133202303    45        
--
>457_3087_1804_F3	ENSMUST00000113126	-	2597	2623	18	44	50	210	3x11x6x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                  |||X||||||||||X|||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCaGGGTGC------
R:         18   T02130201030313312312320111101112011123200113330222    44        
--
>457_3252_1716_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23302010300103300313203111011110111102222033122222    40        
--
>457_4232_3652_F3	ENSMUST00000113126	-	2382	2403	6	27	50	180	5x1x16	
G:       2403    CAGACCCATATCATACTTGCTATGAGGCATGGCCAGCGCCAGGGTGCAGG    2382      
                      |||||XX|||||||||||||||
T:               -----CCATAtcATACTTGCTATGAGG-----------------------
R:          6   T22330201330313312013233122031210133222323012001301    27        
--
>458_756_4344_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	1x4x3x12x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |X|||X||X|||||||||||X|||||
T:               --------------GaCAGaGGtGTGGTGTGGTGtCAGGG----------
R:         15   T23302010303000001123202111011110113212003321232032    40        
--
>458_1648_3667_F3	ENSMUST00000113126	+	2604	2629	22	47	50	180	1x14x4x1x6	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                      |X|||||||||||||X|||XX|||||
T:               ---------------------GaCACCACACCACACcTCTgtCTACA---
R:         22   T20102010320303030023203111011110111112222022311211    47        
--
>458_1653_185_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	13x2x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       |||||||||||||X|X||||||
T:               ----------------------ACACCACACCACAcCtCTGTCT------
R:         23   T33302010320101320123003111011110111201221122212330    44        
--
>458_2118_4813_F3	ENSMUST00000113126	+	2607	2632	25	50	50	180	11x2x4x5x4	
G:       2607    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                         |||||||||||X|X|||X||||X|||
T:               ------------------------ACCACACCACAcCtCTGtCTACaCCA
R:         25   T23120010301302300333203131011110111203221322312101    50        
--
>458_2361_1800_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T23302010300001010123203111011110111102232323213012    39        
--
>458_2728_3894_F3	ENSMUST00000113126	+	2604	2627	22	45	50	180	x14x6x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      X|||||||||||||X|||||X|||
T:               ---------------------gACACCACACCACAcCTCTGtCTA-----
R:         22   T20102013301300000323202111011110111302221022321310    45        
--
>458_2748_2556_F3	ENSMUST00000113126	+	2604	2628	22	46	50	170	1x15x3x2x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                      |X||||||||||||||X||X|X|||
T:               ---------------------GaCACCACACCACACCtCTgTcTAC----
R:         22   T23302010301000000213203111011110111103223132310013    46        
--
>458_2751_3447_F3	ENSMUST00000113126	-	76	102	23	49	50	170	7x1x3x8x2x6	
G:        102    TCTGTATTTGAATTTTTAGCAACGTGTGACTGTCGAATATGAGCTAGAAT    76        
                                       |||||||XX||X|||||||X|X|||||
T:               ----------------------CGTGTGActGTcGAATATGaGcTAGAA-
R:         23   T31201330313212312303223311112311133203331022232200    49        
--
>458_2802_3297_F3	ENSMUST00000113126	-	2596	2620	22	46	50	170	2x1x10x9x3	
G:       2620    AGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAA    2596      
                                      ||XX|||||||||X||||||||X||
T:               ---------------------AGgtGTGGTGTGGtGTCAGGGTgCT----
R:         22   T02330201030020310231232131110111102112120013320320    46        
--
>458_3140_27_F3	ENSMUST00000113126	-	2601	2623	18	40	50	170	1x2x11x9	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  |X|X||||||||||X||||||||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAGG----------
R:         18   T02330201030313112332320111101112011121203131103002    40        
--
>458_3263_3849_F3	ENSMUST00000113126	-	2602	2623	14	35	50	160	3x3x4x12	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCCC    2602      
                              |||X||X|||X|||||||||||
T:               -------------CAGaGGtGTGgTGTGGTGTCAG---------------
R:         14   T22010300131223123203111311110111212330130331013332    35        
--
>458_3802_2817_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x12x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X|||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTGgTGTCAG-----------
R:         18   T02130201030313312312320111101111111121223231311201    39        
--
>459_932_1602_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x11x6	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X||||||||||X|||||
T:               ----------------CAGaGGtGTGGTGTGGTgTCAGG-----------
R:         17   T23302010301331312123203111011110101212031303110102    39        
--
>459_1117_3426_F3	ENSMUST00000113126	-	1424	1463	6	45	50	186	4G2x1x3x1x2x2x4x4x5x11	
G:       1463    CAAAGTGCGTCGGACTCGAAGTACAGGTGCTTGTAGTCATGGCTGAAGAA    1424      
                      |||| ||XX||XX|X|X|||X|||X||||X||||||||||
T:               -----TGCGGCGgaCTcgAaGtACAgGTGcTTGTaGTCATGGCTG-----
R:          6   T01001013303311121223203111011120112212131032121122    45        
--
>459_1301_4484_F3	ENSMUST00000113126	-	2593	2625	16	48	50	176	2x3x11x2x4C1x4x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                ||X||X||||||||||X|X||| |X|||X||||
T:               ---------------GAcAGaGGTGTGGTGTgGtGTCCGgGTGcTGGG--
R:         16   T02130201030313112312320111101112001120330111210020    48        
--
>459_1416_208_F3	ENSMUST00000113126	-	1920	1950	18	48	50	210	1x2x4x4x5x15	
G:       1950    GGACCTGGAGAGCACGCAGAGAAATGTACACTTTTGTTCTTTGTTTGCGG    1920      
                                  |X|X|||X|||X||||X||||||||||||||
T:               -----------------AgAgAAAtGTAcACTTtTGTTCTTTGTTTGC--
R:         18   T20030201030310012302120001133112010110220011001330    48        
--
>459_2297_3756_F3	ENSMUST00000113126	+	2595	2615	13	33	50	170	5x5x11	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                             |||||X||||X||||||||||
T:               ------------CAGCAcCCTGaCACCACACCA-----------------
R:         13   T11220103031311231200213111011110102001231030222211    33        
--
>459_2361_4653_F3	ENSMUST00000113126	-	720	753	2	35	50	186	1x2x4x10x2x5G1x8	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                  |X|X|||X|||||||||X|X|||| |X|||||||
T:               -CaGcAATaTGCAGGCAGtAgGCACGGaCATTGTC---------------
R:          2   T20020103031312031203103113011130112301222020333212    35        
--
>459_2743_1048_F3	ENSMUST00000113126	-	2596	2625	15	44	50	180	x5x3x14x2x3x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               X||||X||X|||||||||||||X|X||X||
T:               --------------gACAGaGGtGTGGTGTGGTGTCaGgGTgCT------
R:         15   T23302010300101021123203111011110111202301332220210    44        
--
>459_2894_2638_F3	ENSMUST00000113126	-	60	83	12	35	50	180	12x2x3x7	
G:         83    TTAGATATCTTAGCTAGAATGATAGTTGGATTGTCTCATTAAATCTTGTC    60        
                            ||||||||||||X|X||X||||||
T:               -----------AGCTAGAATGATaGtTGgATTGTC---------------
R:         12   T10020100031323232203123122011230112102203030122003    35        
--
>459_3014_934_F3	ENSMUST00000113126	-	2599	2625	16	42	50	190	2x14x1x7x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X|||||||||||||XX||||||X||
T:               ---------------GAcAGAGGTGTGGTGTggTGTCAGgGT--------
R:         16   T02330201030313312312220111101112211121230123323132    42        
--
>459_3099_2433_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	16x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       ||||||||||||||||X||
T:               ----------------------ACACCACACCACACCTcTG---------
R:         23   T23302010300301200123203111011110111102321332320003    41        
--
>459_3522_401_F3	ENSMUST00000113126	-	2600	2632	8	40	50	176	1x2G3x2x1x2x17x4	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                        |X| |||X|XX|X||||||||||||||||X|||
T:               -------TgGGGTAgAcaGaGGTGTGGTGTGGTGTCaGGG----------
R:          8   T01113013300013323223201111011110111202000211111123    40        
--
>459_3760_1746_F3	ENSMUST00000113126	+	2594	2630	12	48	50	182	6x1G2x3x2x12x2x1C6	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                            ||||||X ||X||X|X|||||||||||X|X ||||||
T:               -----------CCAGCAcGCTgACaCcACACCACACCTcTgCCTACAC--
R:         12   T23102013331301231233222131111110111102020302311111    48        
--
>460_2100_3249_F3	ENSMUST00000113126	-	2601	2627	14	40	50	176	2x2x14C3x5	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                              ||X|X||||||||||||| |||X||||
T:               -------------TAgAcAGAGGTGTGGTGTCGTGtCAGG----------
R:         14   T02330201030310312312220111101112311321202332220222    40        
--
>460_2511_3256_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	2x11x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||X||||||||||X|||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAG-----------
R:         19   T31330201030313312332320111101112011121230303322220    39        
--
>460_3047_3144_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x7x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X||||||X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGG---------
R:         18   T03230201030313112312120111101112011121300030322332    41        
--
>460_3746_285_F3	ENSMUST00000113126	-	720	750	5	35	50	176	x4x5A11x2x3x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                     X|||X|||| |||||||||||X|X||X||||
T:               ----cAATaTGCAAGCAGTAGGCACtGaCAtTGTC---------------
R:          5   T11220103031310231213203113111110112202003023311122    35        
--
>460_4153_673_F3	ENSMUST00000113126	-	2594	2614	17	37	50	190	15x6	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGAAATCCCTCAAAG    2594      
                                 |||||||||||||||X|||||
T:               ----------------GGTGTGGTGTCAGGGtGCTGG-------------
R:         17   T00133031111202232011110111212003132102233122320012    37        
--
>461_107_4721_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	2x1x3x14x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 ||XX||X|||||||||||||X||||
T:               ----------------CAgaGGtGTGGTGTGGTGTCaGGGT---------
R:         17   T22010300131123003103203111011110111202001311030001    41        
--
>461_709_4456_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x14x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||X|||
T:               -------------------AGGtGTGGTGTGGTGTCaGGG----------
R:         20   T00202010300013030123203111011110111202000300110111    40        
--
>461_1324_4806_F3	ENSMUST00000113126	-	2586	2612	21	47	50	176	9x9T3x2x3	
G:       2612    AAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCTTGCAA    2586      
                                     |||||||||X|||||||| |||X|X||
T:               --------------------TGTGGTGTCaGGGTGCTGTGTAcCtTG---
R:         21   T23101030313112312310311101112020011321111330101111    47        
--
>461_1522_4891_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x3x8x10	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||X|||||||X|||||||||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGGG---------
R:         16   T31130201030313112312320311101112011121200001011323    41        
--
>461_1590_415_F3	ENSMUST00000113126	-	2598	2624	16	42	50	190	4x1x2x7x13	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                ||||XX|X||||||X||||||||||||
T:               ---------------ACAGagGtGTGGTGtGGTGTCAGGGTG--------
R:         16   T22102010301201001123103111011310111212001100001101    42        
--
>461_1642_4649_F3	ENSMUST00000113126	+	2603	2619	21	37	50	170	17	
G:       2603    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                                     |||||||||||||||||
T:               --------------------TGACACCACACCACACC-------------
R:         21   T23002033303101323323312111011110111103032110031111    37        
--
>461_2237_5031_F3	ENSMUST00000113126	-	2590	2623	17	50	50	180	1x2x14x4x4x2x2x1x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                                 |X|X|||||||||||||X|||X|||X|X|XX|||
T:               ----------------CaGaGGTGTGGTGTGGTgTCAgGGTgCtGggTAC
R:         17   T01002013302010300223201111011110131210001330112131    50        
--
>461_2441_790_F3	ENSMUST00000113126	-	2589	2623	16	50	50	190	3x2x1x15x2x4x3x2x3	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTACC    2589      
                                |||X|XX||||||||||||||X|X|||X||X|X||
T:               ---------------CAGaGgtGTGGTGTGGTGTCAgGgTGCtGGgTaCC
R:         16   T12120103032312231232131110111101112100211301011010    50        
--
>461_2586_1622_F3	ENSMUST00000113126	-	2595	2624	16	45	50	180	4x3x14x1x3x2x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                ||||X||X|||||||||||||XX||X|X||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCagGGtGcTG-----
R:         16   T20102013301001301123203111011110111200003102121321    45        
--
>461_2677_2357_F3	ENSMUST00000113126	-	2599	2620	19	40	50	166	3x15C3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X|||||||||||||| |||
T:               ------------------AGGtGTGGTGTGGTGTCACGGT----------
R:         19   T23302013031310231232031110111101112113010121333221    40        
--
>461_2838_734_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x14x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGG-----------
R:         17   T23102010311301022123203111011110111202023331211221    39        
--
>461_3513_518_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x6x8x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X|||||X|||||||X|||||||
T:               ---------------GAcAGAGGtGTGGTGTgGTGTCAG-----------
R:         16   T02330201030313312312220311101112011121233311012301    39        
--
>462_493_3249_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	1x3x15x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                |X||X||||||||||||||X|||
T:               ---------------AcAGaGGTGTGGTGTGGTGtCAG------------
R:         16   T23302010303101133123201111011110113212330333023323    38        
--
>462_594_2816_F3	ENSMUST00000113126	-	84	112	14	42	50	190	2x3x2x2x14x6	
G:        112    CTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATATGTGAAATTG    84        
                              ||X||X|X|X|||||||||||||X|||||
T:               -------------TCaCTgGtCaCGTGTGACTGTCGaATATG--------
R:         14   T23002013031311231230222131111212112300333133222033    42        
--
>462_632_875_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	x3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 X||X||X|||||||||||||||
T:               ----------------cAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302010301303300123203111011110111212321233322010    38        
--
>462_1403_2304_F3	ENSMUST00000113126	-	2597	2625	15	43	50	170	1x4x3x14x2x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               |X|||X||X|||||||||||||X|X|X||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCaGgGtGC-------
R:         15   T23102010000003101123203111011110111202203130010032    43        
--
>462_1817_2455_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23302010300100021123203111011110111201333023021331    36        
--
>462_2093_4738_F3	ENSMUST00000113126	+	2605	2632	23	50	50	186	13x4x1x4G5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                       |||||||||||||X|||XX||| |||||
T:               ----------------------ACACCACACCACAcCTCtgTCTGCACCA
R:         23   T23132010203001012333201111011110111302200122131101    50        
--
>462_2179_2444_F3	ENSMUST00000113126	+	2593	2632	11	50	50	178	1x2G4x1x2T11x6x1A6x3	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                           |X| ||||XX| |||||||||||X|||||X ||||||X||
T:               ----------CcCGGCACccTTACACCACACCAcACCTCtATCTACAcCA
R:         11   T13102010332303031113203111011110101102213322311001    50        
--
>462_2506_4462_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	2x3x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X|||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T12102010303131323123202111011110111212331233213202    38        
--
>462_2663_4517_F3	ENSMUST00000113126	+	2592	2619	10	37	50	166	1x3x6x2T2x13	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                          |X||X|||||X| ||X||||||||||||
T:               ---------AcCCaGCACCcTTACaCCACACCACACC-------------
R:         10   T23122013320002231103203131011110111101303300301332    37        
--
>462_3032_3329_F3	ENSMUST00000113126	-	2599	2620	19	40	50	160	3x14x2x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X|||||||||||||X|X||
T:               ------------------AGGtGTGGTGTGGTGTCaGgGT----------
R:         19   T02020103031310231232031110111101112023013232312102    40        
--
>462_3040_127_F3	ENSMUST00000113126	-	2597	2625	14	42	50	210	2x3x3x18x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                              ||X||X||X|||||||||||||||||X||
T:               -------------GAcAGaGGtGTGGTGTGGTGTCAGGGtGC--------
R:         14   T13020103031313231232031110111101112120001303112111    42        
--
>462_3047_1074_F3	ENSMUST00000113126	-	2601	2620	20	39	50	180	17x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||||||||||||||||X||
T:               -------------------AGGTGTGGTGTGGTGTCaGG-----------
R:         20   T23102013221303102313201111011110111202021023223100    39        
--
>462_3055_591_F3	ENSMUST00000113126	+	2592	2622	10	40	50	176	4x1x1x3x1x2T18	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                          ||||XXX||XX| ||||||||||||||||||
T:               ---------ACCCagcACccTTACACCACACCACACCTCT----------
R:         10   T23312010301000121123203111011110111102223030322102    40        
--
>462_3125_2187_F3	ENSMUST00000113126	+	2604	2630	22	48	50	176	1x16x2x3G4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                      |X|||||||||||||||X|X|| ||||
T:               ---------------------GaCACCACACCACACCTcTgTCGACAC--
R:         22   T23122010300302302133203111011110111102320123211132    48        
--
>462_3363_1592_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	13x4x2x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||X|||X|X|||
T:               ----------------------ACACCACACCACAcCTCtGtCTA-----
R:         23   T23312010303001320023103111011110111202201322321332    45        
--
>462_3371_3291_F3	ENSMUST00000113126	+	2604	2632	22	50	50	170	x17x2x1x1x5x3	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                      X||||||||||||||||X|XXX||||X||
T:               ---------------------gACACCACACCACACCTcTgtcTACAcCA
R:         22   T03102010300003300323202111011110111102320202311201    50        
--
>462_3947_2026_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23322010301301021123203111011110111201203023311212    36        
--
>463_502_4018_F3	ENSMUST00000113126	-	2604	2632	8	36	50	156	x5x2x3G1x3x14	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                        X||||X|X|| |X||X|||||||||||||
T:               -------tGGTGtAgACGGaGGtGTGGTGTGGTGTC--------------
R:          8   T23302010101103021303203111011110111201000311233301    36        
--
>463_611_4098_F3	ENSMUST00000113126	-	2595	2625	15	45	50	190	5x3x11x2x5x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               |||||X||X||||||||||X|X||||X|X||
T:               --------------GACAGaGGtGTGGTGTGGTgTcAGGGtGcTG-----
R:         15   T23132013301001121123200111011110121012003102112101    45        
--
>463_749_1839_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	1x3x3x12x6	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                |X||X||X|||||||||||X|||||
T:               ---------------AcAGaGGtGTGGTGTGGTGtCAGGG----------
R:         16   T13302210300003302123203111011110112212000030111312    40        
--
>463_1044_3079_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23302010301000321123203111011110111232333330002110    36        
--
>463_1074_2773_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x13x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTcAGG-----------
R:         17   T23302010301001000123203111011110111012010302003013    39        
--
>463_1083_2416_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23302010321003032023203111011110111102220332001000    40        
--
>463_1403_2199_F3	ENSMUST00000113126	-	2597	2617	23	43	50	170	16x2x3	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                       ||||||||||||||||X|X||
T:               ----------------------TGTGGTGTGGTGTCAGgGtGC-------
R:         23   T23302010301303001323303111011110111212203133220122    43        
--
>463_2188_2822_F3	ENSMUST00000113126	+	2595	2623	13	41	50	190	5x1x1x3x12x7	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                             |||||XXX||X|||||||||||X||||||
T:               ------------CAGCAcccTGaCACCACACCACaCCTCTG---------
R:         13   T13020103031311231213213111011110110102221321022132    41        
--
>463_2226_2827_F3	ENSMUST00000113126	-	2600	2620	20	40	50	176	17C3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    ||||||||||||||||| |||
T:               -------------------AGGTGTGGTGTGGTGTCCGGG----------
R:         20   T23302010301301302223201111011110111203000023023210    40        
--
>463_2450_1351_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T02130202030313002213103111011110111102220023203011    40        
--
>463_2525_1285_F3	ENSMUST00000113126	-	2600	2622	19	41	50	190	2x17x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||||||||X|||
T:               ------------------AGaGGTGTGGTGTGGTGTCaGGG---------
R:         19   T02330201030313312332320111101111011120200312221231    41        
--
>463_2558_1161_F3	ENSMUST00000113126	-	2598	2625	15	42	50	160	1x4x3x12x2x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                               |X|||X||X|||||||||||X|X|X|||
T:               --------------GaCAGaGGtGTGGTGTGGTGtCaGgGTG--------
R:         15   T23332010300101031123203111011110113222301112203310    42        
--
>463_2596_917_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T02330201030313312312320111101112011121233320132112    39        
--
>463_2614_4671_F3	ENSMUST00000113126	-	2604	2625	16	37	50	180	2x14x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                ||X|||||||||||||X|||||
T:               ---------------GAcAGAGGTGTGGTGTgGTGTC-------------
R:         16   T31130201030313112312220111101112011122313312001022    37        
--
>463_3251_3514_F3	ENSMUST00000113126	-	2601	2625	14	38	50	170	2x3x3x9x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                              ||X||X||X||||||||X|||||||
T:               -------------GAcAGaGGtGTGGTGTGgTGTCAGG------------
R:         14   T13012103032311231232031110111131112120330311311023    38        
--
>463_3821_4122_F3	ENSMUST00000113126	-	2601	2625	15	39	50	176	3x2x1A18	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||X|X ||||||||||||||||||
T:               --------------GACaGaAGTGTGGTGTGGTGTCAGG-----------
R:         15   T01022013303103021223021111011110111212033022222232    39        
--
>463_3883_1230_F3	ENSMUST00000113126	-	88	107	22	41	50	160	4x1x15	
G:        107    TTGCTCTGTATTTGAATTTTTGGTCACGTGTGACTGTCGAATCTTTGAAA    88        
                                      ||||XX||||||||||||||
T:               ---------------------GGTCacGTGTGACTGTCGAA---------
R:         22   T31233320133032311233230122031111212112320002333111    41        
--
>463_4217_2316_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	11x6x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||||||||||X|||||X|||
T:               -------------------AGGTGTGGTGTgGTGTCaGGG----------
R:         20   T23102010303301231323201111011120111202000022323222    40        
--
>463_4278_1885_F3	ENSMUST00000113126	-	2597	2623	19	45	50	170	3x2x1x16x2x3	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAA    2597      
                                   |||X|XX|||||||||||||||X|X||
T:               ------------------CAGaGgtGTGGTGTGGTGTCAGgGtGC-----
R:         19   T33233020133033310231212121110111101112123001333331    45        
--
>464_1193_3210_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	3x3x12x6	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||X|||||
T:               ----------------CAGaGGtGTGGTGTGGTGtCAGGG----------
R:         17   T23122011303001322123203111011110112212003333223222    40        
--
>464_1254_2591_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23102010302301013123203111011110111233221100023302    36        
--
>464_2002_889_F3	ENSMUST00000113126	-	2592	2620	21	49	50	176	11x6C3x3x1x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                                     |||||||||||X||||| |||X||XX|||
T:               --------------------AGGTGTGGTGTgGTGTCCGGGtGCtgGGT-
R:         21   T02130201030313312212320111101112011120300313100010    49        
--
>464_2171_1130_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T13122010300302332213203111011110111102223113232032    40        
--
>464_2789_2280_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T20100010320003021313203111011110111102203033202232    39        
--
>464_2813_503_F3	ENSMUST00000113126	-	2590	2624	16	50	50	176	3x1x3x14x1A2x1x5x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                                |||XX||X|||||||||||||X ||XX||||X|||
T:               ---------------ACAgaGGtGTGGTGTGGTGTCaAGGtgCTGGgTAC
R:         16   T23302010300000231113203111011110111200200232103131    50        
--
>464_3922_1882_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x2x3x12x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||X|||||||||||X||||||
T:               -------------TAgAcAGaGGTGTGGTGTGgTGTCAG-----------
R:         14   T02330201030323312312320111101111111121220232203020    39        
--
>464_4294_1168_F3	ENSMUST00000113126	-	1271	1297	15	41	50	170	4x12x2x3x2x4	
G:       1297    GGCACAGGCTGCTGTGATTCGTAACAGGGTCTATCTCTACTGGTGCGATT    1271      
                               ||||X|||||||||||X|X||X|X|||
T:               --------------TGATtCGTAACAGGGTcTaTCtCtACT---------
R:         15   T02330201030313312322313011200112032123312200322310    41        
--
>465_535_4111_F3	ENSMUST00000113126	+	2610	2632	25	47	50	190	8x10x5	
G:       2610    CAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGAT    2632      
                                         ||||||||X|||||||||X||||
T:               ------------------------ACACCACAcCTCTGTCTAcACCA---
R:         25   T22223022103031311231231031110111202221122321101001    47        
--
>465_812_2668_F3	ENSMUST00000113126	-	2610	2627	22	39	50	160	4x14	
G:       2627    GAAAGAAAGAAATTCTAAACATAGACAGAGGTGTGGTGTGTCACTGTTTG    2610      
                                      ||||X|||||||||||||
T:               ---------------------TAGAcAGAGGTGTGGTGT-----------
R:         22   T32121201023302010303323223122201111011123233332032    39        
--
>465_1871_3035_F3	ENSMUST00000113126	-	1431	1459	10	38	50	170	1x3x3x1x2x2x17	
G:       1459    CAAAGAAAATCGGACTCGAAGTACAGGTGCTTGTAGTCGAAGGAGAAGAA    1431      
                          |X||X||XX|X|X||||||||||||||||
T:               ---------TcGGaCTcgAaGtACAGGTGCTTGTAGTC------------
R:         10   T23302010103301123123203112011320113212320132322221    38        
--
>465_1932_3138_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x2x8x2x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||X|X|||||||X|X||||||
T:               --------CtGAgAGCTcCaACCACAGcTtTTGTAA--------------
R:          9   T00133031111232232000010111202100113002330312101032    36        
--
>465_2813_2844_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T10220303012000300233303111011110111102223233020312    40        
--
>465_2880_1358_F3	ENSMUST00000113126	+	2604	2630	22	48	50	176	x16G3x3x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                      X||||||||||||||| |||X||X|||
T:               ---------------------gACACCACACCACACCGCTGtCTaCAC--
R:         22   T23200201030313312313102111011110111103321322211132    48        
--
>465_3057_2721_F3	ENSMUST00000113126	-	2073	2098	10	35	50	180	x8x1x2x15	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                          X|||||||XX|X||||||||||||||
T:               ---------tGAGAGCTccAaCCACAGCTTTTGTA---------------
R:         10   T00133131111222232031110111232000113101131013302002    35        
--
>465_3800_3359_F3	ENSMUST00000113126	-	2069	2099	9	39	50	190	1x8x1x2x10x6x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X|||||||||X|||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTtTGTAAtCT-----------
R:          9   T00133031111222232031110111232010113002230312322022    39        
--
>466_408_3889_F3	ENSMUST00000113126	-	2596	2623	18	45	50	186	3x3x8x10G3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||X|||||||X||||||||| |||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGGGGGCT-----
R:         18   T02330201030313112312320311101112011121200003231303    45        
--
>466_411_3513_F3	ENSMUST00000113126	-	2594	2622	18	46	50	196	2x19x1C2x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                  ||X||||||||||||||||||X ||X|||
T:               -----------------AGaGGTGTGGTGTGGTGTCAGgCTGcTGG----
R:         18   T01002013301010300223201111011110111212332112102203    46        
--
>466_521_2054_F3	ENSMUST00000113126	-	2597	2625	15	43	50	176	2x3x3x15A2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               ||X||X||X|||||||||||||| ||X||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAAGGtGC-------
R:         15   T33202010303030323123203111011110111210200133111222    43        
--
>466_667_2338_F3	ENSMUST00000113126	-	2597	2625	15	43	50	170	x5x3x12x2x4x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               X||||X||X|||||||||||X|X|||X||
T:               --------------gACAGaGGtGTGGTGTGGTGtCaGGGtGC-------
R:         15   T23302010322103021123203111011110110202000131233023    43        
--
>466_1230_2408_F3	ENSMUST00000113126	+	2605	2628	23	46	50	180	x13x7x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                       X||||||||||||X||||||X|||
T:               ----------------------aCACCACACCACAcCTCTGTcTAC----
R:         23   T23302010301300330123203111011110111002221132312200    46        
--
>466_2101_4833_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111232232011110111232000313011333202002201    36        
--
>466_2131_1457_F3	ENSMUST00000113126	+	2605	2623	23	41	50	190	19	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCTG---------
R:         23   T23122110320000300123203111011110111102221003332122    41        
--
>466_2215_3263_F3	ENSMUST00000113126	+	2605	2629	23	47	50	190	18x1x2x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                       ||||||||||||||||||XX|X|||
T:               ----------------------ACACCACACCACACCTCTgtCtACA---
R:         23   T23102010301302032113203111011110111102222320311312    47        
--
>466_2291_4543_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23102010303133320123203111011110111200033323222022    36        
--
>466_2889_4984_F3	ENSMUST00000113126	-	2596	2625	14	43	50	200	2x3x3x10x9x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                              ||X||X||X|||||||||X||||||||X||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAGGGTgCT-------
R:         14   T30120103031313231232031110111102112120013322322220    43        
--
>466_2963_2647_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x4x6	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||X|||||
T:               --------------------AGGTGTGGTGTgGTGtCAGGG---------
R:         21   T31330201030313112012120111101112011221200232032122    41        
--
>466_2972_2848_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x14x1x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||||XX|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCagGGT---------
R:         17   T21102010301333310123203111011110111201001022021322    41        
--
>466_3405_172_F3	ENSMUST00000113126	-	87	114	13	40	50	160	1x6x2x2x1x8x8	
G:        114    GCTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATT    87        
                             |X|||||X|X|XX|||||||X|||||||
T:               ------------CaTCACTgGtCacGTGTGACtGTCGAAT----------
R:         13   T23202013303103321123022203111121111232030121223210    40        
--
>466_3492_3372_F3	ENSMUST00000113126	-	2604	2624	16	36	50	190	7x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                |||||||X|||||||||||||
T:               ---------------ACAGAGGtGTGGTGTGGTGTC--------------
R:         16   T23302010302202031122203111011110111202300312312300    36        
--
>466_3503_3440_F3	ENSMUST00000113126	+	2589	2627	7	45	50	182	2x1x6x1x2G2x1x17C1x4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                       ||XX|||||XX| ||XX|||||||||||||||| |X|||
T:               ------GGtaCCCAGcaCGCTgaCACCACACCACACCTCCGtCTA-----
R:          7   T23302010301001210133223111011110111102203022323231    45        
--
>466_3596_384_F3	ENSMUST00000113126	-	2594	2623	18	47	50	186	3x15x3x1T2x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                  |||X||||||||||||||X||X ||X||||
T:               -----------------CAGaGGTGTGGTGTGGTGtCAgTGTgCTGG---
R:         18   T02330201030310112012320111101111011021111133210210    47        
--
>466_3703_2014_F3	ENSMUST00000113126	+	2834	2865	1	32	50	166	6x2x9x1G1x3x5x4	
G:       2834    ACCCTTTTCTAATGTCTTCCATTCCTATCTCCCCCCAAAAGAAATATTAT    2865      
                 ||||||X|X||||||||X |X||X||||X|||
T:               ACCCTTtTcTAATGTCTtGCaTTcCTATcTCC------------------
R:          1   T31002010323031122213330102333220202130033131022133    32        
--
>466_3968_1481_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	2x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  ||X||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTC--------------
R:         18   T01032013333313023223201111011110111220330322222032    36        
--
>466_4001_3998_F3	ENSMUST00000113126	-	2601	2625	15	39	50	190	5x3x14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||||X||
T:               --------------GACAGaGGtGTGGTGTGGTGTCaGG-----------
R:         15   T30112010303231121123203111011110111202013233231311    39        
--
>467_548_4164_F3	ENSMUST00000113126	-	2597	2620	20	43	50	160	3x12x4x1x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X|||||||||||X|||XX|||
T:               -------------------AGGtGTGGTGTGGTGtCAGggTGC-------
R:         20   T23300010301300300323203111011110113212321133333003    43        
--
>467_928_1244_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	x5x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               X||||X||X|||||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T23332010300300021123203111011110111212230101130100    38        
--
>467_1239_442_F3	ENSMUST00000113126	+	2602	2628	20	46	50	170	3x13x3x2x1x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                    |||X||||||||||||X||X|XX||||
T:               -------------------CTGaCACCACACCACAcCTcTgtCTAC----
R:         20   T23302010300000033123213111011110111202322322313332    46        
--
>467_1394_1679_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010303301001123203111011110111201300323223231    36        
--
>467_1412_272_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23100010301303302123203111011110111210333333023002    37        
--
>467_2345_564_F3	ENSMUST00000113126	-	85	116	10	41	50	166	2x4x4x1A1x3x11x5	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    85        
                          ||X|||X|||X |X||X||||||||||X||||
T:               ---------GTcATCaCTGgACaCGtGTGACTGTCGaATAT---------
R:         10   T30120103031313231212213133111212112300333232332230    41        
--
>467_2478_1996_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T33302032203322321123203111011110111303330323323221    35        
--
>467_2715_419_F3	ENSMUST00000113126	-	2601	2625	15	39	50	190	4x1x3x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               ||||XX||X||||||||||||||||
T:               --------------GACAgaGGtGTGGTGTGGTGTCAGG-----------
R:         15   T23102010123031021103203111011110111212030312303202    39        
--
>467_2723_2407_F3	ENSMUST00000113126	+	2591	2618	9	36	50	166	1x2x7x1x2T14	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2618      
                         |X|X||||||XX| ||||||||||||||
T:               --------TaCcCAGCACccTTACACCACACCACAC--------------
R:          9   T23102010321301231123203111011110111122332033232303    36        
--
>467_2767_1562_F3	ENSMUST00000113126	-	2603	2623	19	39	50	170	6x10x5	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAA    2603      
                                   ||||||X|||||||||X||||
T:               ------------------CAGAGGtGTGGTGTGGtGTCA-----------
R:         19   T33233020103031311231222031110111102112132232232210    39        
--
>467_2778_815_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x14x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||X|||
T:               -------------------AGGtGTGGTGTGGTGTCaGGG----------
R:         20   T20302010303001331313203111011110111202003033023033    40        
--
>467_2940_1955_F3	ENSMUST00000113126	-	2595	2623	19	47	50	170	3x3x10x6x1x2x4	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAA    2595      
                                   |||X||X|||||||||X|||||XX|X|||
T:               ------------------CAGaGGtGTGGTGTGGtGTCAGggTgCTG---
R:         19   T33233020103031311231232031110111102112123212321203    47        
--
>467_3195_2268_F3	ENSMUST00000113126	-	2606	2626	14	34	50	170	1x5x15	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                              |X||||X||||||||||||||
T:               -------------AgACAGaGGTGTGGTGTGGTG----------------
R:         14   T23302010303301121123201111011110112102303323213330    34        
--
>467_3356_576_F3	ENSMUST00000113126	-	2601	2620	19	38	50	160	3x12x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |||X|||||||||||X||||
T:               ------------------AGGtGTGGTGTGGTGtCAGG------------
R:         19   T13020103031310231232031110111101122120313301212312    38        
--
>467_3358_352_F3	ENSMUST00000113126	-	2591	2626	13	48	50	200	3x3x3x8x8x2x1x3x5	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2591      
                             |||X||X||X|||||||X|||||||X|XX||X||||
T:               ------------AGAcAGaGGtGTGGTGTgGTGTCAGgGtgCTgGGTA--
R:         13   T00302010331312231232031110111201112121023323001302    48        
--
>468_1577_2056_F3	ENSMUST00000113126	-	2596	2614	22	40	50	170	15x4	
G:       2614    TCTAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTAAAAATCCCT    2596      
                                      |||||||||||||||X|||
T:               ---------------------GGTGTGGTGTCAGGGtGCT----------
R:         22   T0213020103031031233232011110111212000132021.2023.1    40        
--
>468_2619_3496_F3	ENSMUST00000113126	-	2060	2098	10	48	50	172	3x6x2x9x4x1C1A5x1x5	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                          |||X|||||X|X||||||||X|||X | |||||XX||||
T:               ---------TGAgAGCTCcAaCCACAGCTtTTGtCAACTGCCtgTTCA--
R:         10   T0013333111120223223111011123230013210121303.2021.3    48        
--
>468_2995_2186_F3	ENSMUST00000113126	-	2599	2623	14	38	50	170	3x3x8x8x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                              |||X||X|||||||X|||||||X||
T:               -------------CAGaGGtGTGGTGTgGTGTCAGgGT------------
R:         14   T2201030313112312320311101112011121220123033.1211.0    38        
--
>468_3308_8_F3	ENSMUST00000113126	-	2058	2099	9	50	50	206	1x8x1x2x14x1x1x3C2x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2058      
                         |X|||||||XX|X|||||||||||||XXX|| ||X|||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTaatCTCCCtGTTCAAT
R:          9   T0013303111122223233111011123200011110222001.3021.3    50        
--
>469_209_4248_F3	ENSMUST00000113126	-	2591	2615	16	40	50	176	1x2x15A6	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                |X|X|||||||||||||| ||||||
T:               ---------------TgGtGTGGTGTCAGGGTGATGGGTA----------
R:         16   T0013303111123223203111011121200112310013001113202.    40        
--
>469_726_3360_F3	ENSMUST00000113126	-	88	116	10	38	50	170	2x4x3x2x2x11x5	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    88        
                          ||X|||X||X|X|X||||||||||X||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGtCGAA------------
R:         10   T0100101303131323123022313111121212232003002203100.    38        
--
>469_1844_3269_F3	ENSMUST00000113126	-	2588	2612	19	43	50	170	9x2x9x2x3	
G:       2612    ACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCTCTCAAAG    2588      
                                   |||||||||X|X||||||||X|X||
T:               ------------------TGTGGTGTCaGgGTGCTGGGtAcCT-------
R:         19   T0013303111122223203111011120230113210033002102203.    43        
--
>469_2144_2486_F3	ENSMUST00000113126	-	2226	2246	17	37	50	170	2x8x11	
G:       2246    ATGATGGGGAGGTCGAACGCACGCACGCACCCACGCATTCCAATGAGCCC    2226      
                                 ||X|||||||X||||||||||
T:               ----------------ACgCACGCACgCACCCACGCA-------------
R:         17   T3231230023020103011311331113110011331223323311222.    37        
--
>469_2896_267_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T1133020103031300230330311101111011110223203003210.    39        
--
>469_3507_4634_F3	ENSMUST00000113126	+	2600	2626	18	44	50	176	2x3x12x6T3	
G:       2600    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                  ||X||X|||||||||||X||||| |||
T:               -----------------CCcTGaCACCACACCACaCCTCTTTCT------
R:         18   T2021030313132300020321311101111011210222002223232.    44        
--
>469_3942_1235_F3	ENSMUST00000113126	+	2591	2626	9	44	50	186	3x2x4x2x2T13x3x2x4	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                         |||X|X|||X|X| |||||||||||||X||X|X|||
T:               --------TACcCaGCAcCcTTACACCACACCACAcCTcTgTCT------
R:          9   T3102311303130323120320311101111011130212212203001.    44        
--
>469_4271_3197_F3	ENSMUST00000113126	-	2602	2627	14	39	50	180	2x2x3x11x8	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                              ||X|X||X||||||||||X|||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         14   T0233020103031031231232011110111201112122002230210.    39        
--
>470_1268_3459_F3	ENSMUST00000113126	-	2600	2622	22	44	50	170	4x4x2x13	
G:       2622    AAAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAA    2600      
                                      ||||X|||X|X||||||||||||
T:               ---------------------AGAGgTGTgGtGTGGTGTCAGGG------
R:         22   T23033003133312010003022223111203111011121200223320    44        
--
>470_2645_4894_F3	ENSMUST00000113126	-	2596	2631	8	43	50	166	2x2C3x3x3x8x2x6x3x3	
G:       2631    AATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                        ||X| |||X||X||X|||||||X|X|||||X||X||
T:               -------GGtGCAGAcAGaGGtGTGGTGTgGtGTCAGgGTgCT-------
R:          8   T23323013031312231232031110111202112123012320220032    43        
--
>470_2932_2871_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T33210113302000300133203111011110111102223233332030    40        
--
>470_3370_2875_F3	ENSMUST00000113126	-	85	105	21	41	50	170	2x15x4	
G:        105    CTCTGTATTTGAATTTTTAGTCACGTGTGACTGTCGAATATTTGAAATTG    85        
                                     ||X||||||||||||||X|||
T:               --------------------TCaCGTGTGACTGTCGAaTAT---------
R:         21   T23332010303130231233222131111212112323333003232203    41        
--
>470_3524_822_F3	ENSMUST00000113126	+	762	801	1	40	50	206	4x4x2G2x14x1x2x2x4x4	
G:        762    GGGGAGGTCGACACGGATTTTCCGCCACTGGATTCCAATGAGCCCATTCA    801       
                 ||||X|||X| ||X|||||||||||||XX|X|X|||X|||
T:               GGGGaGGTcGGCAcGGATTTTCCGCCActGgAtTCCaATG----------
R:          1   T10000201030310302300020330100112002000313210230122    40        
--
>470_3615_2126_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	8x9x1x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||||||||X||||||||XX|||||
T:               ---------------GACAGAGGtGTGGTGTGgtGTCAG-----------
R:         16   T02330201030313312112220311101111201121230020211220    39        
--
>470_3666_461_F3	ENSMUST00000113126	-	2595	2620	21	46	50	160	11x6x2x2x1x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X|||||X|X|XX|||
T:               --------------------AGGTGTGGTGTgGTGTCaGgGtgCTG----
R:         21   T02330201030313012312320111101112011123230303213223    46        
--
>470_4021_2756_F3	ENSMUST00000113126	+	2589	2629	7	47	50	182	2x3x1A4x2x1x2x12x6T2x4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                       ||X||X ||||X|XX|X|||||||||||X||||| ||X|||
T:               ------GGtACcAAGCAcCctGaCACCACACCACaCCTCTTTCtACA---
R:          7   T20020100031310231203313111011110112102220023311030    47        
--
>471_810_1100_F3	ENSMUST00000113126	+	723	752	20	49	50	160	5x1x1x2x4x11x2x4	
G:        723    GGAGCCGAAGCTCAATGACAATGTCAGTGCCTACTGCCTGCATATTGCTG    752       
                                    |||||XXX|X|||X||||||||||X|X|||
T:               -------------------AATGTcagTgCCTaCTGCCTGCATaTtGCT-
R:         20   T1301310303131223123203111011230201213021313232132.    49        
--
>471_1402_3601_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T0013303111123223203111011123230011300322023331332.    36        
--
>471_1822_897_F3	ENSMUST00000113126	-	2593	2625	15	47	50	176	2x3x3x14x1x1x2C6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                               ||X||X||X|||||||||||||XXX| ||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCaggGCGCTGGG---
R:         15   T2330201030130102212320311101111011120120333210023.    47        
--
>471_2116_4498_F3	ENSMUST00000113126	-	2069	2100	13	44	50	160	1x4x5x11x1x2x2x1x5	
G:       2100    ATGGATTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAG    2069      
                             |X|||X||||X||||||||||XX|X|XX||||
T:               ------------TcTGAgAGCTcCAACCACAGCttTtGtaATCT------
R:         13   T0233020103031321232232301010111231201132032222212.    44        
--
>471_2487_2174_F3	ENSMUST00000113126	-	2594	2622	18	46	50	176	2x3x14C1x3x5	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                  ||X||X||||||||||||| |X||X||||
T:               -----------------AGaGGtGTGGTGTGGTGTCCGgGTgCTGG----
R:         18   T2002210033131033122320311101111011120330103210131.    46        
--
>471_2921_2299_F3	ENSMUST00000113126	-	2603	2625	22	44	50	170	2x3x3x15	
G:       2625    AAGAAAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAA    2603      
                                      ||X||X||X||||||||||||||
T:               ---------------------GAcAGaGGtGTGGTGTGGTGTCA------
R:         22   T2301123233020003001311231232031110111101112132222.    44        
--
>471_3909_231_F3	ENSMUST00000113126	+	2601	2622	19	40	50	180	1x3x18	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                   |X||X|||||||||||||||||
T:               ------------------CcTGaCACCACACCACACCTCT----------
R:         19   T2310101032310232013321311101111011110222203102230.    40        
--
>471_4092_1550_F3	ENSMUST00000113126	-	2603	2627	14	38	50	176	2x2G13x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X| |||||||||||||X||||||
T:               -------------TAgAGAGAGGTGTGGTGTgGTGTCA------------
R:         14   T3133020103031031222222011110111201112131003222032.    38        
--
>471_4287_1995_F3	ENSMUST00000113126	-	1715	1740	13	38	50	160	2x5x2x2x12x3	
G:       1740    ACAAAGTAGAGATAAACCTTCCCCTAGAGCCCAGCAGCAGCACTAAGTTT    1715      
                             ||X||||X|X|X|||||||||||X||
T:               ------------TAaACCTtCcCcTAGAGCCCAGCaGC------------
R:         13   T0010303111123320102122032322230012302330012112033.    38        
--
>472_904_624_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x12x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X|||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAT-------------
R:          9   T00133031111232232031110111232000313031333322003132    37        
--
>472_1293_2197_F3	ENSMUST00000113126	+	790	809	26	45	50	160	2x7x11	
G:        790    GAGGTCGACACGGATTTTCCGCCACTGGATTCCAATGAGCCCATTCATAA    809       
                                          ||X||||||X||||||||||
T:               -------------------------TGgATTCCAaTGAGCCCATT-----
R:         26   T20020103031312231230333310112302012312230013030222    45        
--
>472_1382_3304_F3	ENSMUST00000113126	-	2069	2099	9	39	50	210	1x8x1x2x9x10	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X||||||||X|||||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAATCT-----------
R:          9   T00133031111222232031110111232100113032220202301001    39        
--
>473_262_2251_F3	ENSMUST00000113126	-	2602	2630	10	38	50	170	1x4x2x3x3x13x3	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                          |X|||X|X||X||X||||||||||||X||
T:               ---------GtGTAgAcAGaGGtGTGGTGTGGTGTcAG------------
R:         10   T23302012313113023123203111011110111012230313222321    38        
--
>473_1844_2204_F3	ENSMUST00000113126	-	2591	2621	19	49	50	190	1x3x14x4x4x1x4	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                                   |X||X|||||||||||||X|||X|||XX|||
T:               ------------------GaGGtGTGGTGTGGTGTCaGGGtGCTggGTA-
R:         19   T23302010321003310233203111011110111222003132020132    49        
--
>473_1948_882_F3	ENSMUST00000113126	-	91	124	2	35	50	166	5x1x1C2x4x3x2x2x13	
G:        124    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                  |||||XX ||X|||X||X|X|X||||||||||||
T:               -ATTCCtgCGTcATCaCTgGtCaCGTGTGACTGTC---------------
R:          2   T03302010331313231230222131111212112233310302310210    35        
--
>473_2349_3212_F3	ENSMUST00000113126	-	2599	2626	14	41	50	186	1x5x3x13A5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                              |X||||X||X|||||||||||| |||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTAAGGGT---------
R:         14   T23302010002000021123203111011110111302001322321222    41        
--
>473_2579_2122_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23302010301001000123203111011110111102220110022222    40        
--
>473_2907_1064_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	2x5x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X||||X||X|||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T23102010000303321123203111011110111202322322323201    36        
--
>473_3145_2053_F3	ENSMUST00000113126	+	2592	2627	10	45	50	172	x4G2x1x2x14A6x2x3	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                          X||| ||XX|X||||||||||||| ||||||X|X||
T:               ---------aCCCGGCacCcTGACACCACACCAAACCTCTgTcTA-----
R:         10   T23102013321003030303212111011110100102223112300202    45        
--
>473_3201_581_F3	ENSMUST00000113126	-	2596	2614	17	35	50	170	x19	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTAAAAATCCCTCAAAG    2596      
                                 X||||||||||||||||||
T:               ----------------gGTGTGGTGTCAGGGTGCT---------------
R:         17   T00133031311232232011110111212001132030220301222201    35        
--
>473_3306_1719_F3	ENSMUST00000113126	-	2593	2618	23	48	50	160	1x14x2x2x1x6	
G:       2618    GAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                       |X|||||||||||||X|X|XX|||||
T:               ----------------------GtGTGGTGTGGTGTCaGgGtgCTGGG--
R:         23   T02030201330312202212323311101111011123220323210002    48        
--
>473_3342_3395_F3	ENSMUST00000113126	+	2604	2627	22	45	50	200	9x10x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      |||||||||X|||||||||X||||
T:               ---------------------GACACCACAcCACACCTCTgTCTA-----
R:         22   T23102010303002120303302111011130111102222122322032    45        
--
>473_3576_1631_F3	ENSMUST00000113126	+	2602	2621	20	39	50	180	2x18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    ||X|||||||||||||||||
T:               -------------------CTgACACCACACCACACCTC-----------
R:         20   T23302010301002302323202111011110111102213230220222    39        
--
>473_3696_4963_F3	ENSMUST00000113126	-	2601	2633	7	39	50	170	1x6x1x2x1x2x15x2x3	
G:       2633    AAATTCCTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                       |X|||||XX|XX|X||||||||||||||X|X||
T:               ------CtGGTGTagAcaGaGGTGTGGTGTGGTGtCaGG-----------
R:          7   T01002013101111323223201111011110113202030122130202    39        
--
>474_1082_2200_F3	ENSMUST00000113126	+	2932	2949	7	24	50	160	5x13	
G:       2932    TAGATATCTTTGAAATTGTAAATGACTAATTTGGTCATTAAATCTTGTCA    2949      
                       |||||X||||||||||||
T:               ------TCTTTgAAATTGTAAATG--------------------------
R:          7   T0111032220032003011300311000233012312333023322222.    24        
--
>474_1166_2120_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	12x6x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       ||||||||||||X|||||X|||
T:               ----------------------ACACCACACCACaCCTCTgTCT------
R:         23   T2112010313131323111312311101111011210222212222231.    44        
--
>474_2115_2503_F3	ENSMUST00000113126	-	2599	2625	16	42	50	170	2x3x3x8x8x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||X|||||||X|||||||X||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGT--------
R:         16   T0233020103031331231232031110111201112122012330213.    42        
--
>474_3819_334_F3	ENSMUST00000113126	-	2597	2620	21	44	50	200	11x6x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                     |||||||||||X|||||X||||||
T:               --------------------AGGTGTGGTGTgGTGTCaGGGTGC------
R:         21   T0233020103031301231232011110111201112220011331221.    44        
--
>474_4106_162_F3	ENSMUST00000113126	-	2595	2612	32	49	50	160	9x9	
G:       2612    AAAGAAATTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGA    2595      
                                                |||||||||X||||||||
T:               -------------------------------TGTGGTGTCaGGGTGCTG-
R:         32   T1303323312130201030310322312120311101112320011321.    49        
--
>475_2218_2357_F3	ENSMUST00000113126	+	765	800	4	39	50	166	1x4x2G2x2x13x1x2x5x3	
G:        765    GGGGAGGTCGACACGGATTTTCCGCCACTGGATTCCAATGAGCCCATTCA    800       
                    |X|||X| ||X|X||||||||||||XX|X||||X||
T:               ---GaGGTcGGCAcGgATTTTCCGCCACtgGaTTCCaAT-----------
R:          4   T02030201030313312300020330110201302000323231320.22    39        
--
>475_4127_1452_F3	ENSMUST00000113126	-	2595	2623	18	46	50	190	3x11x7x3x2x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                  |||X||||||||||X||||||X||X|X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGGtGcTG----
R:         18   T02330201030313112312320111101112011121300012211.30    46        
--
>476_720_3579_F3	ENSMUST00000113126	-	2602	2617	23	38	50	160	16	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                       ||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAG------------
R:         23   T23303210320303312323203111011110111212221233201113    38        
--
>476_1405_1364_F3	ENSMUST00000113126	-	2601	2622	18	39	50	180	2x3x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  ||X||X||||||||||||||||
T:               -----------------AGaGGtGTGGTGTGGTGTCAGG-----------
R:         18   T23302230302103300223203111011110111212020313322220    39        
--
>476_1493_23_F3	ENSMUST00000113126	-	2967	2991	13	37	50	190	1x13x4x7	
G:       2991    TAGCCTTTTAAATTTAATATTGAATATGTGACAAGATCTTCTTGGACAAT    2967      
                             |X||||||||||||X|||X||||||
T:               ------------TtTAATATTGAATAtGTGaCAAGAT-------------
R:         13   T31013020133032030333012033111111102232133132221120    37        
--
>476_2262_1120_F3	ENSMUST00000113126	-	1176	1199	4	27	50	160	4x8x2x6x4	
G:       1199    AGGCTTGTAATGGTGGCTGCTAAGCATTCCTGCCTGGCAGTCCCAGCAAG    1176      
                    ||||X|||||||X|X|||||X|||
T:               ---CTTGtAATGGTGgCtGCTAAgCAT-----------------------
R:          4   T23032010303101123313230331310123112313002133303000    27        
--
>476_2435_2492_F3	ENSMUST00000113126	-	2598	2626	13	41	50	190	1x2x3x3x16x4	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                             |X|X||X||X|||||||||||||||X|||
T:               ------------AgAcAGaGGtGTGGTGTGGTGTCAGgGTG---------
R:         13   T00302010331313231232031110111101112122011131300011    41        
--
>476_2865_1772_F3	ENSMUST00000113126	-	2601	2625	16	40	50	190	16x2x2x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                ||||||||||||||||X|X|X||||
T:               ---------------GACAGAGGTGTGGTGTgGtGtCAGG----------
R:         16   T23000201030303112112220111101112021221202020233320    40        
--
>476_4059_2046_F3	ENSMUST00000113126	+	2594	2619	12	37	50	186	7x1x2T15	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                            |||||||XX| |||||||||||||||
T:               -----------CCAGCACccTTACACCACACCACACC-------------
R:         12   T11202010303301231123203111011110111100301301221033    37        
--
>477_1300_3727_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x7x10	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||X|||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAAT-------------
R:          9   T00133031111202232031110111222000113031331201211..0    37        
--
>477_1836_3007_F3	ENSMUST00000113126	-	2595	2625	16	46	50	176	2x3x11x5A2x2x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                ||X||X||||||||||X|||| ||X|X||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTAAGgGtGCTG----
R:         16   T02330201030313312312320111101112011130230013211..0    46        
--
>477_1874_4028_F3	ENSMUST00000113126	-	2594	2625	16	47	50	200	2x3x11x7x4x2x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                ||X||X||||||||||X||||||X|||X|X||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAgGGTgCtGG---
R:         16   T31330201030313312312320111101112011121300103110..2    47        
--
>477_2180_187_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	5x11x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    |||||X||||||||||X||||
T:               -------------------CTGACaCCACACCACAcCTCT----------
R:         20   T23302010303231123113212121011110111202223333323..2    40        
--
>478_1872_1262_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	5x3x12x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||X|X||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGG-----------
R:         15   T23302010321003321123203111011110113202021233232003    39        
--
>478_1888_2584_F3	ENSMUST00000113126	+	1102	1125	23	46	50	160	7x9x2x2x4	
G:       1102    AACGCCTGGGAGTTCTGCCTGGTTCGCGAGAACAGTTCAAGGGCAGACGG    1125      
                                       |||||||X||||||||X|X|X|||
T:               ----------------------TTCGCGAgAACAGTTCaAgGgCAG----
R:         23   T20201030313112312133303023332020112102201023120110    46        
--
>478_3626_3252_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010301302011123202111011110111203023003011302    36        
--
>478_3715_4174_F3	ENSMUST00000113126	-	2599	2627	14	42	50	190	2x2x3x5x6x11	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                              ||X|X||X||||X|||||X||||||||||
T:               -------------TAgAcAGaGGTGtGGTGTgGTGTCAGGGT--------
R:         14   T02330201030310312312320113101112011121200101000230    42        
--
>478_3964_123_F3	ENSMUST00000113126	+	2596	2620	14	38	50	190	4x5x12x4	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                              ||||X||||X|||||||||||X|||
T:               -------------AGCAcCCTGaCACCACACCACaCCT------------
R:         14   T03120113031310231200213111011110112102032123013033    38        
--
>478_3997_1743_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	3x2x3x14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||X|X||X|||||||||||||X||
T:               --------------GACaGaGGtGTGGTGTGGTGTCaGG-----------
R:         15   T23302010303331121323203111011110111202010022332012    39        
--
>478_4052_2576_F3	ENSMUST00000113126	+	2604	2621	22	39	50	180	18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                      ||||||||||||||||||
T:               ---------------------GACACCACACCACACCTC-----------
R:         22   T23302010300211133123222111011110111102213311220133    39        
--
>479_831_4392_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23302010300003300123203111011110111213220332202103    37        
--
>479_926_2559_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010103131301123203111011110111202200320303322    36        
--
>479_1473_2407_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T03230201030313112312320111101112011121130003313023    38        
--
>479_1646_2905_F3	ENSMUST00000113126	-	2599	2625	15	41	50	170	5x2x1x12x2x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               |||||X|XX|||||||||||X|X||||
T:               --------------GACAGaGgtGTGGTGTGGTGtCaGGGT---------
R:         15   T10302010300000321123233111011110112202001333223113    41        
--
>479_2344_3291_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302010323031030123202111011110111212212023320112    38        
--
>479_2367_2262_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23302012103221323123203111011110111213103320011101    37        
--
>479_2441_1368_F3	ENSMUST00000113126	+	2603	2627	21	45	50	170	2x12x5x1x5	
G:       2603    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                     ||X|||||||||||X||||XX||||
T:               --------------------TGaCACCACACCACaCCTCtgTCTA-----
R:         21   T13131201030313312313113111011110113102213122332113    45        
--
>479_2619_3635_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010301003301123203111011110111202223322022233    36        
--
>479_2619_3635_F3	ENSMUST00000113126	+	2605	2626	23	44	50	166	13x5A3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       |||||||||||||X|||| |||
T:               ----------------------ACACCACACCACAcCTCTATCT------
R:         23   T23302010301003301123203111011110111202223322022233    44        
--
>479_3445_414_F3	ENSMUST00000113126	-	91	125	1	35	50	170	1x5x1x2x2x4x3x2x2x13	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                 |X||||XX|X|X|||X||X|X|X||||||||||||
T:               CaTTCCtgTgTcATCaCTgGtCaCGTGTGACTGTC---------------
R:          1   T20302010131313231230222131111212112203033103321311    35        
--
>479_3497_3397_F3	ENSMUST00000113126	+	2602	2621	20	39	50	180	2x18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    ||X|||||||||||||||||
T:               -------------------CTgACACCACACCACACCTC-----------
R:         20   T23302010203323320313202111011110111102230302231232    39        
--
>479_3917_304_F3	ENSMUST00000113126	-	2597	2623	18	44	50	190	3x3x8x10x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                  |||X||X|||||||X|||||||||X||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGGGtGC------
R:         18   T31330201030313112312320311101112011121200313331011    44        
--
>479_3946_2548_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T20102010303303221113203111011110111102222331221221    40        
--
>479_4183_817_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x13x6	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||X||||||||||||X|||||
T:               -------------------CTgACACCACACCACaCCTCT----------
R:         20   T33233120133000310231202111011110112102223032210232    40        
--
>480_553_633_F3	ENSMUST00000113126	-	78	116	11	49	50	170	2x4x3x2x2x12x2x1x1x3x3x4	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGT    78        
                           ||X|||X||X|X|X|||||||||||X|XXX||X||X|||
T:               ----------GTcATCaCTgGtCaCGTGTGACTGTcGaatATgAGcTAG-
R:         11   T23302012323131323123022213111121211033203302202321    49        
--
>480_1750_3746_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23302010300303311113203111011110111102222101221022    40        
--
>480_2075_2072_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	12x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       ||||||||||||X||||||
T:               ----------------------ACACCACACCACaCCTCTG---------
R:         23   T23302010300001302123203111011110112102221302201311    41        
--
>480_2535_2625_F3	ENSMUST00000113126	-	2592	2625	14	47	50	180	2x3x3x10x6x3x1x2x4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2592      
                              ||X||X||X|||||||||X|||||X||XX|X|||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAGgGTgcTgGGT---
R:         14   T00302010301311231232031110111102112121010122001122    47        
--
>480_3107_4524_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x12x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X|||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAT-------------
R:          9   T00133031111202232031110111232000313030121120111012    37        
--
>480_3161_425_F3	ENSMUST00000113126	+	2605	2629	23	47	50	210	13x8x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                       |||||||||||||X|||||||X|||
T:               ----------------------ACACCACACCACAcCTCTGTCtACA---
R:         23   T01002013303012022222201111011110111202221123311021    47        
--
>480_3161_425_F3	ENSMUST00000113126	-	2598	2623	17	42	50	186	1x19x2A3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                 |X||||||||||||||||||X| |||
T:               ----------------CaGAGGTGTGGTGTGGTGTCaGAGTG--------
R:         17   T01002013303012022222201111011110111202221123311021    42        
--
>480_3969_131_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	1x2x17x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |X|X||||||||||||||||X|||
T:               ----------------CaGaGGTGTGGTGTGGTGTCaGGG----------
R:         17   T01002013323111033223201111011110111232000103012032    40        
--
>481_809_2804_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	14x5	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      ||||||||||||||X||||
T:               ---------------------GACACCACACCACAcCTCT----------
R:         22   T23302010303101123313232111011110111202223332223122    40        
--
>481_1236_1204_F3	ENSMUST00000113126	-	78	114	14	50	50	176	2x6x1A1x1x2x10x6x4x3	
G:        114    TGCTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAG    78        
                              ||X|||||X |XX|X|||||||||X|||||X|||X||
T:               -------------CAtCACTGgACacGtGTGACTGTCgAATATgAGCtAG
R:         14   T13330201330311112112122130331112121122203333223032    50        
--
>481_4196_3708_F3	ENSMUST00000113126	-	2603	2625	14	36	50	170	2x3x3x15	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                              ||X||X||X||||||||||||||
T:               -------------GAcAGaGGtGTGGTGTGGTGTCA--------------
R:         14   T10320103031313231232021110111101112132001120332021    36        
--
>482_431_2054_F3	ENSMUST00000113126	-	2597	2624	16	43	50	180	2x2x3x14x2x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                ||X|X||X|||||||||||||X|X||||
T:               ---------------ACaGaGGtGTGGTGTGGTGTCaGgGTGC-------
R:         16   T23302010320101031323203111011110111232201133122.32    43        
--
>482_432_2051_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x13x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X||||||||||||X||
T:               --------------GACAGaGGtGTGGTGTGGTGTcAG------------
R:         15   T23302010303001121123203111011110111112203123223.02    38        
--
>482_1013_1180_F3	ENSMUST00000113126	-	2597	2620	20	43	50	180	3x3x4x14	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X||X|||X|||||||||||||
T:               -------------------AGGtGTgGTGtGGTGTCAGGGTGC-------
R:         20   T13302010303200002133203110011310111212001130230.20    43        
--
>482_1618_1189_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111232232031110111232000103003330212330.13    36        
--
>482_1988_3765_F3	ENSMUST00000113126	-	89	125	1	37	50	190	1x5x1x2x2x4x3x2x2x15	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    89        
                 |X||||XX|X|X|||X||X|X|X||||||||||||||
T:               CaTTCCtgTgTcATCaCTgGtCaCGTGTGACTGTCGA-------------
R:          1   T23302010131313231230222131111212112323011102312.00    37        
--
>482_2220_1243_F3	ENSMUST00000113126	+	2602	2627	20	45	50	200	1x4x11x10	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                    |X|||X||||||||||X|||||||||
T:               -------------------CtGACaCCACACCACAcCTCTGTCTA-----
R:         20   T31313112212320311101112101011110111002221122323.31    45        
--
>482_2954_4659_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111222232031110111232300113001010332302.22    36        
--
>482_3065_966_F3	ENSMUST00000113126	+	2594	2620	12	38	50	170	3x4x3x1x3x13	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                            |||X|||X||XX||X||||||||||||
T:               -----------CCAgCACcCTgaCAcCACACCACACCT------------
R:         12   T03302013001301031120233110011110111102003221101.13    38        
--
>482_3838_2759_F3	ENSMUST00000113126	-	2596	2625	15	44	50	160	x5x3x12x2x2x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               X||||X||X|||||||||||X|X|X|X|||
T:               --------------gACAGaGGtGTGGTGTGGTGtCaGgGtGCT------
R:         15   T03102110333103321123203111011110113202303132230.21    44        
--
>482_4091_1762_F3	ENSMUST00000113126	-	2595	2620	19	44	50	160	1x2x4x11x5x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                                   |X|X|||X||||||||||X||||X||
T:               ------------------AgGtGTGgTGTGGTGTCAgGGTGcTG------
R:         19   T20020103031310231233031113111101112100011221320.10    44        
--
>483_494_2176_F3	ENSMUST00000113126	-	2602	2628	11	37	50	170	3x2x3x3x10x6	
G:       2628    AATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                           |||X|X||X||X|||||||||X|||||
T:               ----------GTAgAcAGaGGtGTGGTGTGGtGTCAG-------------
R:         11   T23302010220130231232031110111102112122333123322322    37        
--
>483_521_2740_F3	ENSMUST00000113126	-	90	117	9	36	50	180	1x2x4x3x2x16	
G:        117    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATTG    90        
                         |X|X|||X||X|X|||||||||||||||
T:               --------TgTcATCaCTgGtCACGTGTGACTGTCG--------------
R:          9   T01300013031313231230221131111212112302022103201320    36        
--
>483_1093_1073_F3	ENSMUST00000113126	-	2077	2098	22	43	50	160	1x8x2x11	
G:       2098    GCTGCTCATGGATTCTCCCTTTGAGAGCTCCAACCACAGCTTTTCACCAT    2077      
                                      |X|||||||X|X||||||||||
T:               ---------------------TgAGAGCTCcAaCCACAGCTTT-------
R:         22   T11210001130020103031313222232211110111232003202322    43        
--
>483_1126_1882_F3	ENSMUST00000113126	-	2596	2623	17	44	50	180	3x3x14x1x3x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 |||X||X|||||||||||||XX||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCagGGtGCT------
R:         17   T23302010303133323123203111011110111231003132202002    44        
--
>483_1922_3280_F3	ENSMUST00000113126	-	2593	2631	9	47	50	188	3T2x5x3x13x3A2T2x3	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                         ||| ||X||||X||X||||||||||||X|| || ||X||
T:               --------GGTTTAgACAGaGGtGTGGTGTGGTGTcAGAGTTCTgGG---
R:          9   T13302010301003121123203111011110111012221022000312    47        
--
>483_2255_3564_F3	ENSMUST00000113126	+	2600	2622	18	40	50	176	2x2T18	
G:       2600    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                  ||X| ||||||||||||||||||
T:               -----------------CCcTTACACCACACCACACCTCT----------
R:         18   T23302010303032331303203111011110111102222133330222    40        
--
>483_2424_1401_F3	ENSMUST00000113126	-	2594	2625	15	46	50	206	5x3x14x3x2A4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                               |||||X||X|||||||||||||X||X| ||||
T:               --------------GACAGaGGtGTGGTGTGGTGTCaGGgTACTGG----
R:         15   T13302010301203021123203111011110111202021312102100    46        
--
>483_2608_3771_F3	ENSMUST00000113126	-	2590	2625	15	50	50	186	3x2x3x8x8T1x2x1x7	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                               |||X|X||X|||||||X||||||| |X|XX||||||
T:               --------------GACaGaGGtGTGGTGTgGTGTCAGTGtGctGGGTAC
R:         15   T23302010303001121323203111011120111212113113100131    50        
--
>483_2674_524_F3	ENSMUST00000113126	-	2596	2627	13	44	50	186	2x5x2A8x8x1x5	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                             ||X||||X| ||||||||X|||||||XX||||
T:               ------------TAgACAGaGATGTGGTGTgGTGTCAGggTGCT------
R:         13   T23320010303103021123223111011120111212231132222002    44        
--
>483_2987_2795_F3	ENSMUST00000113126	-	2600	2627	13	40	50	200	x7x3x12x6	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                             X||||||X||X|||||||||||X|||||
T:               ------------tAGACAGaGGtGTGGTGTGGTGtCAGGG----------
R:         13   T20002010330333221123203111011110112212003322033023    40        
--
>483_2999_4567_F3	ENSMUST00000113126	+	2596	2623	14	41	50	180	x4x2x3x13x6	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                              X|||X|X||X||||||||||||X|||||
T:               -------------aGCAcCcTGaCACCACACCACAcCTCTG---------
R:         14   T23302010222313231203213111011110111302221003022322    41        
--
>483_3301_816_F3	ENSMUST00000113126	-	2594	2627	13	46	50	180	2x2x3x3x14x2x3x2x3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                             ||X|X||X||X|||||||||||||X|X||X|X||
T:               ------------TAgAcAGaGGtGTGGTGTGGTGTCaGgGTgCtGG----
R:         13   T33122010303003123123203111011110111202301333103220    46        
--
>483_3351_3356_F3	ENSMUST00000113126	+	2662	2684	25	47	50	176	3x4T15	
G:       2662    CTCTGCAGACCTCACCATGGTCCCGCCTGTGGCAGCATCCTTGGGCCAGG    2684      
                                         |||X||| |||||||||||||||
T:               ------------------------GCCtGTGTCAGCATCCTTGGGCC---
R:         25   T32233020103003311231212213011111212313202010030303    47        
--
>483_3465_3677_F3	ENSMUST00000113126	-	2596	2623	17	44	50	186	1x2x19x2C3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 |X|X||||||||||||||||||X| |||
T:               ----------------CaGaGGTGTGGTGTGGTGTCAGgGCGCT------
R:         17   T01002013303113123223201111011110111212203332030302    44        
--
>483_3730_1675_F3	ENSMUST00000113126	+	2598	2627	16	45	50	186	3x1x2T13x6x4	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                |||XX| |||||||||||||X|||||X|||
T:               ---------------CACccTTACACCACACCACAcCTCTGtCTA-----
R:         16   T23102010321003021123203111011110111202221022331333    45        
--
>483_3897_4364_F3	ENSMUST00000113126	-	2603	2627	13	37	50	170	1x4x2x3x15	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                             |X|||X|X||X||||||||||||||
T:               ------------TaGACaGaGGtGTGGTGTGGTGTCA-------------
R:         13   T32302010303100221223203111011110111213323133330222    37        
--
>483_3910_488_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	x13x8	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       X||||||||||||X|||||||
T:               ----------------------aCACCACACCACAcCTCTGTC-------
R:         23   T23302010320300030123203111011110111002221120002302    43        
--
>483_3917_445_F3	ENSMUST00000113126	-	2602	2623	16	37	50	180	3x3x16	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||X|||||||||||||||
T:               ---------------CAGaGGtGTGGTGTGGTGTCAG-------------
R:         16   T10320103031311231232031110111101112123131023130310    37        
--
>483_4112_851_F3	ENSMUST00000113126	+	2602	2624	20	42	50	170	2x1x13x7	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                    ||XX||||||||||||X||||||
T:               -------------------CTgaCACCACACCACAcCTCTGT--------
R:         20   T01001013320013123223201111011110111002221103122013    42        
--
>484_647_2851_F3	ENSMUST00000113126	-	2602	2632	8	38	50	176	5x2A2x2x3x13x3	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                        |||||X| ||X|X||X||||||||||||X||
T:               -------TGGTGtAAACaGaGGtGTGGTGTGGTGTcAG------------
R:          8   T20112303101133001023203111011110111012302333212.03    38        
--
>484_1632_3438_F3	ENSMUST00000113126	-	2596	2625	15	44	50	166	2x3x3x12x4C2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               ||X||X||X|||||||||||X||| ||X||
T:               --------------GAcAGaGGtGTGGTGTGGTGtCAGCGTgCT------
R:         15   T12022010203313322123203111011110112212331032222.12    44        
--
>484_2556_3809_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||X||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111232232031110111202000113001320230201.12    36        
--
>484_2950_2752_F3	ENSMUST00000113126	-	2596	2623	18	45	50	180	3x11x6x1x3x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||||||||||X|||||XX||X|||
T:               -----------------CAGaGGTGTGGTGTgGTGTCagGGtGCT-----
R:         18   T02330201030313112312320111101112011120000013200.00    45        
--
>484_2987_1162_F3	ENSMUST00000113126	+	2596	2627	14	45	50	206	3T2x3x2x17x4	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                              ||| ||X||X|X||||||||||||||||X|||
T:               -------------AGCTCCcTGaCaCCACACCACACCTCTGtCTA-----
R:         14   T20133331211232232203213101011110111102221322332.10    45        
--
>484_3045_913_F3	ENSMUST00000113126	+	779	801	5	27	50	170	2x11x5x5	
G:        779    CGGATTTTCCGCCACTGGATTCCAATGAGCCCATTCATAAGTTTGGCTTC    801       
                     ||X||||||||||X||||X||||
T:               ----TTtTCCGCCACTGgATTCcAATG-----------------------
R:          5   T23302010203301121123023103111120111120302320031.02    27        
--
>484_3059_607_F3	ENSMUST00000113126	-	2601	2620	20	39	50	180	5x15	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||||X||||||||||||||
T:               -------------------AGGTGtGGTGTGGTGTCAGG-----------
R:         20   T23302013301303101223201101011110111212030302121.03    39        
--
>484_3174_1294_F3	ENSMUST00000113126	-	2604	2633	7	36	50	180	2x4x2x2x3x3x14	
G:       2633    AAATTCCTGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                       ||X|||X|X|X||X||X|||||||||||||
T:               ------CTgGTGtAgAcAGaGGtGTGGTGTGGTGTC--------------
R:          7   T00302032201133023123203111011110111201311332222.00    36        
--
>484_3896_2716_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	2x5x3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             ||X||||X||X||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGT---------------
R:         13   T23302010301303321123203111011110111000002333123.00    35        
--
>484_4286_1675_F3	ENSMUST00000113126	-	770	787	11	28	50	160	11x7	
G:        787    TGCATGCGTGGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    770       
                           |||||||||||X||||||
T:               ----------GGCGGAAAATCcGTGTCG----------------------
R:         11   T20021321022033020003233111231232331110111233322.33    28        
--
>485_443_2592_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	2x3x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X|||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T33302010313132023123203111011110111212220333202020    38        
--
>485_1410_1554_F3	ENSMUST00000113126	-	2596	2624	16	44	50	190	7x11x2x3x3x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                |||||||X||||||||||X|X||X||X||
T:               ---------------ACAGAGGtGTGGTGTGGTgTcAGgGTgCT------
R:         16   T23302010301322031122203111011110121012301332022012    44        
--
>485_1603_2005_F3	ENSMUST00000113126	-	2065	2099	9	43	50	170	1x3x5x1x2x13x1x2x4x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                         |X||X||||XX|X||||||||||||XX|X|||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtaAtCTGcCT-------
R:          9   T00133031111202232031110111232000100002210020303223    43        
--
>485_1762_1076_F3	ENSMUST00000113126	-	719	750	5	36	50	186	x4x6x11A4x1x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|||X|||||X|||||||||| ||||XX||||
T:               ----cAATaTGCAGgCAGTAGGCACAGACAttGTCA--------------
R:          5   T13200103031312231213203111221122112100011333312021    36        
--
>485_1783_459_F3	ENSMUST00000113126	-	2600	2625	15	40	50	166	1x4x3x13G4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |X|||X||X|||||||||||| ||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTGAGGG----------
R:         15   T23301010300001111123203111011110111122003233203012    40        
--
>485_1945_127_F3	ENSMUST00000113126	-	2597	2625	15	43	50	196	x5x7x13A3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               X||||X||||||X|||||||||||| |||
T:               --------------gACAGaGGTGTGgTGTGGTGTCAGGATGC-------
R:         15   T23302010301331021123201111311110111212023133230003    43        
--
>485_2271_2838_F3	ENSMUST00000113126	-	719	753	2	36	50	190	1x2x4x6x11x1x1x3x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X|||||X||||||||||XXX||X|||||
T:               -CaGcAATaTGCAGgCAGTAGGCACtgaCAtTGTCA--------------
R:          2   T20020103031312231213203111011110112102000122320323    36        
--
>485_2885_3737_F3	ENSMUST00000113126	+	531	561	7	37	50	176	2x2G5x2x1x14x4	
G:        531    TACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAA    561       
                       ||X| |||||X|XX|||||||||||||X|||
T:               ------AAgTGTGATGgCaaGGGTCATGTGGGTaCAA-------------
R:          7   T22201330311112312333200121311100111100021322231313    37        
--
>485_3807_594_F3	ENSMUST00000113126	-	2590	2625	15	50	50	186	3x2x11x7x1x2C4x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                               |||X|X||||||||||X||||||XX| ||||X|X||
T:               --------------GACaGaGGTGTGGTGTgGTGTCAggGCGCTGgGtAC
R:         15   T01002013303111121323201111011120111211203332130231    50        
--
>485_4159_3035_F3	ENSMUST00000113126	-	2788	2813	18	43	50	160	5x3x2x2x2x12	
G:       2813    GGAGACAGTGGGTCAGATCAGAATGAGAGAGGCATTCATTCAGAGGGCTA    2788      
                                  |||||X||X|X|X|X|||||||||||
T:               -----------------TCAGAaTGaGaGaGgCATTCATTCAG-------
R:         18   T23030210303133023121223310232323313021302122200300    43        
--
>486_1929_4393_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23322010301331233123203111011110111211233303202002    37        
--
>486_2017_4055_F3	ENSMUST00000113126	-	2595	2631	9	45	50	196	4x3x4x2x1C3x3x12x4	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                         ||||X||X|||X|X |||X||X|||||||||||X|||
T:               --------GGTGtAGaCAGaGgCGTGgTGtGGTGTCAGGGTgCTG-----
R:          9   T23301010301103231123223311111010111212001332130333    45        
--
>486_2269_1394_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T23302010301300310133203111011110111102223113213022    40        
--
>486_2373_2514_F3	ENSMUST00000113126	-	2606	2631	9	34	50	186	3x5G2x15	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                         |||X|||| ||X||||||||||||||
T:               --------GGTgTAGAGAGaGGTGTGGTGTGGTG----------------
R:          9   T01001013301313222223201111011110113112110203033303    34        
--
>486_4031_2506_F3	ENSMUST00000113126	-	2604	2631	9	36	50	160	3x1x3x1x3x3x14	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                         |||XX||XX||X||X|||||||||||||
T:               --------GGTgtAGacAGaGGtGTGGTGTGGTGTC--------------
R:          9   T23332010301303202123203111011110111202321033021103    36        
--
>486_4265_763_F3	ENSMUST00000113126	+	2602	2623	20	41	50	180	15x1x6	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                    |||||||||||||||XX|||||
T:               -------------------CTGACACCACACCACacCTCTG---------
R:         20   T20002010001333023303212111011110112002221013130322    41        
--
>487_1988_953_F3	ENSMUST00000113126	-	718	754	1	37	50	190	x4x4x5x5x2x1x4x2x10	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                 X|||X|||X||||X||||X|XX|||X|X|||||||||
T:               tCAGcAATaTGCAgGCAGtAggCACtGaCATTGTCAT-------------
R:          1   T12120103031311031233033111111130112133300022121122    37        
--
>487_3351_3029_F3	ENSMUST00000113126	+	2591	2624	9	42	50	166	1x5x2x2x1x2T13x3x4	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                         |X||||X|X|XX| |||||||||||||X||X|||
T:               --------TaCCCAgCaCccTTACACCACACCACAcCTcTGT--------
R:          9   T23102010301001030123203111011110111002021113133211    42        
--
>487_4223_661_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000132010223301200231    33        
--
>488_3062_1870_F3	ENSMUST00000113126	-	2597	2623	17	43	50	170	3x3x14x2x2x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                 |||X||X|||||||||||||X|X|X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGgGtGC-------
R:         17   T23302032313033020123203111011110111202300133332121    43        
--
>488_3172_3642_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T02330201030313312312320111101112011121222213300312    39        
--
>488_3401_1721_F3	ENSMUST00000113126	-	2591	2612	18	39	50	180	13x4x5	
G:       2612    CAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAGA    2591      
                                  |||||||||||||X|||X||||
T:               -----------------TGTGGTGTCAGGGtGCTgGGTA-----------
R:         18   T01030301112312320311101112120031323001302200200220    39        
--
>488_3607_2730_F3	ENSMUST00000113126	-	2072	2100	8	36	50	170	2x4x4x1x2x12x4	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                        ||X|||X|||XX|X|||||||||||X|||
T:               -------TCtGAGaGCTccAaCCACAGCTTTTgTAA--------------
R:          8   T22103031211221232031110111232000013001221223212321    36        
--
>488_4058_2662_F3	ENSMUST00000113126	+	2604	2622	22	40	50	190	19	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |||||||||||||||||||
T:               ---------------------GACACCACACCACACCTCT----------
R:         22   T23302010303101121321202111011110111102222323121322    40        
--
>489_110_3146_F3	ENSMUST00000113126	+	535	572	11	48	50	172	1x5x3x13x2x2x1x3A2G4	
G:        535    TACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAA    572       
                           |X||||X||X||||||||||||X|X|XX|| || ||||
T:               ----------TtGATGgCAaGGGTCATGTGGGtAcAacTGAAAGTAAG--
R:         11   T32231030013212312313200121311100032112212002130212    48        
--
>489_2946_4546_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000122000130113332033    33        
--
>489_3522_3462_F3	ENSMUST00000113126	-	2594	2623	16	45	50	186	3C2x8x10x1x5	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                                ||| ||X|||||||X|||||||||XX||||
T:               ---------------CAGCGGtGTGGTGTgGTGTCAGGGtgCTGG-----
R:         16   T32320103032312231233031110111201112120020321022203    45        
--
>489_4048_2959_F3	ENSMUST00000113126	-	2606	2629	11	34	50	160	x8x1x3x12	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                           X|||||||XX||X|||||||||||
T:               ----------tGTAGACAgaGGtGTGGTGTGGTG----------------
R:         11   T23302010303113221113203111011110112202333231022211    34        
--
>489_4219_2283_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010300132331123203111011110111202323322013011    36        
--
>490_2033_2099_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23300010303132122121203111011110111210303232002.12    37        
--
>490_2198_988_F3	ENSMUST00000113126	+	2589	2621	7	39	50	216	3x2x7x1x2T17	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                       |||X|X||||||XX| |||||||||||||||||
T:               ------GGTaCcCAGCACccTTACACCACACCACACCTC-----------
R:          7   T00303010111201231113203111011110111102200332222.23    39        
--
>490_2406_1689_F3	ENSMUST00000113126	-	2597	2621	19	43	50	170	1x3x14x2x5	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                   |X||X|||||||||||||X|X||||
T:               ------------------GaGGtGTGGTGTGGTGTCaGgGTGC-------
R:         19   T23302010320303012313203111011110111202201133212.10    43        
--
>490_2745_1990_F3	ENSMUST00000113126	-	1419	1448	21	50	50	176	1x15x2x1G4x6	
G:       1448    CAAAGAAAACTGAACAGGCGGTACAGGTGCTTGTAGTCATGGCTGCTTAG    1419      
                                     |X||||||||||||||X|X ||||X|||||
T:               --------------------GtACAGGTGCTTGTAGtCaGGGCTgCTTAG
R:         21   T23302010123130333123103112011320113202320032032.02    50        
--
>490_2781_2059_F3	ENSMUST00000113126	+	2604	2627	22	45	50	180	14x1x5x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                      ||||||||||||||XX||||X|||
T:               ---------------------GACACCACACCACAccTCTGtCTA-----
R:         22   T23302010323201021123202111011110111222221222320.00    45        
--
>490_2936_4896_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113002110032210.00    36        
--
>490_3330_1774_F3	ENSMUST00000113126	-	2597	2620	20	43	50	180	3x14x2x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X|||||||||||||X|X||||
T:               -------------------AGGtGTGGTGTGGTGTCaGgGTGC-------
R:         20   T23302010303331223123202111011110111202301133231.20    43        
--
>490_3737_2016_F3	ENSMUST00000113126	-	151	189	12	50	50	172	2x1x9x2x6x2A4x5x1T5	
G:        189    TCAGCCAACAGCAGGCACTGACGGAGGATGAGTCTTCTCTAGGTCAACGT    151       
                            ||XX||||||||X|X|||||X| ||||X||||X |||||
T:               -----------CAggCACTGACGgAgGATGAgTATTCTcTAGGtTAACGT
R:         12   T02022100031311231121213121023120133022023202030.11    50        
--
>490_4125_2513_F3	ENSMUST00000113126	-	2065	2099	9	43	50	210	1x3x5x1x2x13x7x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                         |X||X||||XX|X||||||||||||X||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAATCTGcCT-------
R:          9   T00133031111202232031110111232000103032210020301.11    43        
--
>491_449_5047_F3	ENSMUST00000113126	+	2078	2111	15	48	50	166	4x6x2x4C1x1x3x5x7	
G:       2078    CAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAAGCAATGTTTAGG    2111      
                               ||||X|||||X|X||| |XX||X||||X||||||
T:               --------------AAGCtGTGGTtGgAGCCCtcAGaAGCAaTGTTTA--
R:         15   T10013131123123302331110131122300131200231131100311    48        
--
>491_1744_3008_F3	ENSMUST00000113126	-	2591	2617	22	48	50	176	8x2x11x2T3	
G:       2617    AATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2591      
                                      ||||||||X|X||||||||||X| |||
T:               ---------------------TGTGGTGTgGtGTCAGGGTGCtGTGTA--
R:         22   T13020103031313231231231110111003112120011301111320    48        
--
>491_1846_363_F3	ENSMUST00000113126	-	2068	2099	9	40	50	180	1x3x5x1x2x7x2x11	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X||||||X|X||||||||||
T:               --------CtGAgAGCTccAaCCACAGcTtTTGTAATCTG----------
R:          9   T00133031111232232031110111212100113032210200320033    40        
--
>491_2425_939_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23302010303301021123203111011110111202233233213120    36        
--
>492_1104_474_F3	ENSMUST00000113126	-	2601	2622	21	42	50	180	1x4x17	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                     |X|||X||||||||||||||||
T:               --------------------AgAGGtGTGGTGTGGTGTCAGG--------
R:         21   T10020210033020203033012203111011110111212020031.13    42        
--
>492_2026_3016_F3	ENSMUST00000113126	-	2605	2629	11	35	50	170	4x2x3x3x13	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                           ||||X|X||X||X||||||||||||
T:               ----------TGTAgAcAGaGGtGTGGTGTGGTGT---------------
R:         11   T23302010313113023123203111011110111133330320010.23    35        
--
>492_2106_532_F3	ENSMUST00000113126	-	2598	2624	16	42	50	170	1x3x3x12x4x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                |X||X||X|||||||||||X|||X|||
T:               ---------------AcAGaGGtGTGGTGTGGTGtCAGgGTG--------
R:         16   T23312010300003033123203111011110113212301100322.23    42        
--
>492_3656_4217_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000121012220301210.23    33        
--
>492_4253_179_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	2x3x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               ||X||X||X|||||||||||||X|||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23302010300301123123203111011110111202000322301.00    40        
--
>493_99_1277_F3	ENSMUST00000113126	+	115	139	26	50	50	170	1x3x2x8x11	
G:        115    CGACAGTCACACGTGACCAGTGATGACACAGGAATGTGTGAGATGGTTCT    139       
                                          |X||X|X|||||||X||||||||||
T:               -------------------------AcACaGgAATGTGTgAGATGGTTCT
R:         26   T32110221003322010303133113011322203111122223101022    50        
--
>493_584_4504_F3	ENSMUST00000113126	+	943	965	23	45	50	170	1x5x5x12	
G:        943    ATCCAAGTAGACAACACAAAGGTCACCATGAAGGAGATCTTGCTCAAGGC    965       
                                       |X||||X||||X|||||||||||
T:               ----------------------TcACCAtGAAGgAGATCTTGCTC-----
R:         23   T20000010303331123113203111011120232223220132223122    45        
--
>493_2759_759_F3	ENSMUST00000113126	-	1814	1835	16	37	50	180	6x7x9	
G:       1835    ACAGGATATGCTTAGTGAGCAGCACTCAGCCCCTCCAAAAGTCAGCATGA    1814      
                                ||||||X||||||X||||||||
T:               ---------------TGAGCAgCACTCAgCCCCTCCA-------------
R:         16   T20020103031313231223103112211300022011000322222202    37        
--
>493_2853_2685_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x8x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||X|||||||
T:               --------CtGAgAGCTccAaCCACAGCtTTTGTAA--------------
R:          9   T00133031111232232031110111233000113001030203112222    36        
--
>493_3966_836_F3	ENSMUST00000113126	+	2594	2623	12	41	50	172	3A3x1x2T13x6	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                            ||| |||XX| |||||||||||||X|||||
T:               -----------CCAACACccTTACACCACACCACAcCTCTG---------
R:         12   T23302012301301011123203111011110111202221033031202    41        
--
>493_4041_890_F3	ENSMUST00000113126	-	2251	2273	9	31	50	150	2x2x1x7x11	
G:       2273    TGCCTGCACTTAGAAGGCTACGCACGCACGCTCGACACGGATTTTCCGCC    2251      
                         ||X|XX||||||X||||||||||
T:               --------CTtAgaAGGCTAcGCACGCACGC-------------------
R:          9   T23012013223301020323233113311330330100122322323220    31        
--
>494_3227_1739_F3	ENSMUST00000113126	+	2599	2622	17	40	50	180	3x6x11x4	
G:       2599    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                 |||X|||||X||||||||||X|||
T:               ----------------ACCcTGACAcCACACCACACcTCT----------
R:         17   T20201130030231030103212112011110111112222221030.32    40        
--
>494_4206_2306_F3	ENSMUST00000113126	+	2605	2632	23	50	50	162	x17G2A3x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                       X|||||||||||||||| || |||X|||
T:               ----------------------aCACCACACCACACCTCGGTATACaCCA
R:         23   T31330201030313312312320111011110111102230133313.11    50        
--
>495_60_1937_F3	ENSMUST00000113126	-	2432	2453	15	36	50	160	9x2x6x5	
G:       2453    GTGGGTACAACTGCACAGCAGGCACCGGTAAGAGGACTCCCCCTGCACTC    2432      
                               |||||||||X|X|||||X||||
T:               --------------ACAGCAGGCaCcGGTAAgAGGA--------------
R:         15   T00013120133033311231203013301301220223212313331.22    36        
--
>495_1348_2778_F3	ENSMUST00000113126	-	82	103	24	45	50	180	13x6x3	
G:        103    GCTCTGTATTTGAATTTTTAGCAACGTGTGACTGTCGAATATGAGAAATT    82        
                                        |||||||||||||X|||||X||
T:               -----------------------ACGTGTGACTGTCgAATATgAG-----
R:         24   T23302010303231023123023213111121211202033302202.20    45        
--
>495_1364_4271_F3	ENSMUST00000113126	+	2605	2627	27	49	50	180	5x9x9	
G:       2605    GAAAAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTAC    2627      
                                           |||||X||||||||X||||||||
T:               --------------------------ACACCaCACCACACcTCTGTCTA-
R:         27   T12230000113300010301231333111103111011111222112.00    49        
--
>495_1936_2734_F3	ENSMUST00000113126	+	2596	2625	14	43	50	180	4x5x2x10x1x4x4	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                              ||||X||||X|X|||||||||XX|||X|||
T:               -------------AGCAcCCTGaCaCCACACCACacCTCtGTC-------
R:         14   T02020102031310231200213101011110112302211120022.11    43        
--
>495_2602_3299_F3	ENSMUST00000113126	+	2595	2621	13	39	50	176	1x4x5x11G5	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                             |X|||X||||X|||||||||| |||||
T:               ------------CaGCAcCCTGaCACCACACCAGACCTC-----------
R:         13   T13020103031313231200213111011110122102212332033.13    39        
--
>496_729_3430_F3	ENSMUST00000113126	-	2597	2617	23	43	50	170	2x16x3	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                       ||X|||||||||||||||X||
T:               ----------------------TGtGGTGTGGTGTCAGGGtGC-------
R:         23   T10030033020103031313203131011110111212000133230.02    43        
--
>496_780_2137_F3	ENSMUST00000113126	+	2604	2621	22	39	50	160	1x17	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                      |X||||||||||||||||
T:               ---------------------GaCACCACACCACACCTC-----------
R:         22   T13330201030313312302303111011110111102230311012.32    39        
--
>496_2236_2755_F3	ENSMUST00000113126	-	2602	2620	20	38	50	150	x3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    X||X|||||||||||||||
T:               -------------------aGGtGTGGTGTGGTGTCAG------------
R:         20   T10232121122303000133203111011110111212320310330.12    38        
--
>496_2477_1266_F3	ENSMUST00000113126	+	2593	2622	11	40	50	172	3x1T3x1x2T18	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           |||X |||XX| ||||||||||||||||||
T:               ----------CCCaTCACccTTACACCACACCACACCTCT----------
R:         11   T23300010302000321131203111011110111102220332301.02    40        
--
>496_2717_4212_F3	ENSMUST00000113126	-	2594	2627	14	47	50	186	2x2x14x2x3x5A1x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                              ||X|X|||||||||||||X|X||X|||| |X|||
T:               -------------TAgAcAGAGGTGTGGTGTgGtGTcAGGGAGcTGG---
R:         14   T13030201030313312312220111101112021101200221210.23    47        
--
>496_2724_948_F3	ENSMUST00000113126	+	2591	2621	9	39	50	162	3x1A4x2x2T12x5	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                         |||X ||||X|X| ||||||||||||X||||
T:               --------TACcAAGCAcCcTTACACCACACCACaCCTC-----------
R:          9   T12120110031310231203203111011110112102200233030.31    39        
--
>496_4261_1751_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02330201030313312312320111101112011121330023331.22    38        
--
>497_1667_3906_F3	ENSMUST00000113126	-	1856	1881	15	40	50	166	5G1x4x2x13	
G:       1881    AGACGGAGTTTTCGATGGCTATGTACAGTCTTGCTGGGACACAGTACAGG    1856      
                               ||||| |X|||X|X||||||||||||
T:               --------------ATGGCGAtGTAcAgTCTTGCTGGGAC----------
R:         15   T32230103031313231033211133111220132100210322332222    40        
--
>497_2592_4738_F3	ENSMUST00000113126	-	2591	2614	17	40	50	180	11x6x1x6	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                 |||||||||||X|||||XX|||||
T:               ----------------GGTGTGGTGTCaGGGTGctGGGTA----------
R:         17   T00133031111202232011110111232001120100130011332133    40        
--
>497_2701_2779_F3	ENSMUST00000113126	-	86	116	10	40	50	190	2x4x3x2x2x11x7	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    86        
                          ||X|||X||X|X|X||||||||||X||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGtCGAATA----------
R:         10   T03303110131313231230223131111212102320331130321133    40        
--
>497_2968_1843_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T22220010321131321123203111011110111200323312220211    36        
--
>497_3345_1760_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	3x15	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||X||||||||||||||
T:               --------------------AGGtGTGGTGTGGTGTCA------------
R:         21   T11030201030313012302320311101111011121023232011202    38        
--
>497_3927_2020_F3	ENSMUST00000113126	-	88	114	12	38	50	170	4x3x2x2x13x3	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    88        
                            ||||X||X|X|X||||||||||||X||
T:               -----------CATCaCTgGtCaCGTGTGACTGTCgAA------------
R:         12   T23312310031313231230223131111212112120211123000210    38        
--
>498_305_3510_F3	ENSMUST00000113126	-	82	105	22	45	50	160	1x14x4x2x3	
G:        105    GCTCTGTATTTGAATTTTTAGTCACGTGTGACTGTCGAATATGAGAAATT    82        
                                      |X|||||||||||||X|||X|X||
T:               ---------------------TcACGTGTGACTGTCgAATaTgAG-----
R:         22   T01020013203111023233023113111121211202030302201.00    45        
--
>498_1242_1192_F3	ENSMUST00000113126	-	2594	2614	17	37	50	170	2x11x8	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGAAATCCCTCAAAG    2594      
                                 ||X||||||||||X|||||||
T:               ----------------GGtGTGGTGTCAGgGTGCTGG-------------
R:         17   T00133031111202232031110111212101132101220302312.22    37        
--
>498_1516_1740_F3	ENSMUST00000113126	-	2601	2623	18	40	50	170	3x3x10x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  |||X||X|||||||||X||||||
T:               -----------------CAGaGGtGTGGTGTGGtGTCAGG----------
R:         18   T12130201030323302012320311101111021121202320302.10    40        
--
>498_1541_3420_F3	ENSMUST00000113126	+	2607	2626	20	39	50	160	8x2x10	
G:       2607    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2626      
                                    ||||||||X|X|||||||||
T:               -------------------ACCACACCaCaCCTCTGTCT-----------
R:         20   T22010303131123312203101111001310222112203030330.00    39        
--
>498_2248_1507_F3	ENSMUST00000113126	+	2602	2623	20	41	50	180	3x13x6	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                    |||X||||||||||||X|||||
T:               -------------------CTGaCACCACACCACAcCTCTG---------
R:         20   T23030313112312000333213111011110111002221202022.22    41        
--
>498_3217_2133_F3	ENSMUST00000113126	-	2072	2100	8	36	50	170	2x4x4x1x2x13x3	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                        ||X|||X|||XX|X||||||||||||X||
T:               -------TCtGAGaGCTccAaCCACAGCTTTTGtAA--------------
R:          8   T00323031211221232031110111232000103010110213332.21    36        
--
>498_4008_1294_F3	ENSMUST00000113126	-	2595	2623	18	46	50	190	3x11x8x2x1x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                  |||X||||||||||X|||||||X|XX|||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAGgGtgCTG----
R:         18   T02330201030313112312320111101112011121230023211.13    46        
--
>499_100_3831_F3	ENSMUST00000113126	-	2074	2098	10	34	50	170	3x5x1x2x14	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                          |||X||||XX|X|||||||||||||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGT----------------
R:         10   T02333031211202232031110111232000112010120103332221    34        
--
>499_1100_4871_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000111011210221332222    34        
--
>499_3647_2990_F3	ENSMUST00000113126	-	2062	2098	10	46	50	182	x8x1x2x9x7C3x1T4	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTTCTT    2062      
                          X|||||||XX|X||||||||X|||||| |||X ||||
T:               ---------tGAGAGCTccAaCCACAGCTtTTGTAACCTGcTTGTT----
R:         10   T02333031011222232031110111232300113010210201100213    46        
--
>500_281_3405_F3	ENSMUST00000113126	-	2599	2625	16	42	50	170	2x3x3x8x8x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||X|||||||X|||||||X||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGT--------
R:         16   T31330201030313312312320311101112011121220121232022    42        
--
>500_1737_1649_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x12x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||||X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCAG------------
R:         15   T23102010323330021123203111011110113212300322230232    38        
--
>500_2432_2643_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x11x5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X||||||||||X||||
T:               -------------GAcAGaGGtGTGGTGTGGTgTCAG-------------
R:         14   T31020103031313231232031110111101012122233233001223    37        
--
>500_2750_3638_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	16x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       ||||||||||||||||X||
T:               ----------------------ACACCACACCACACCTcTG---------
R:         23   T23333010320203032132203111011110111102321233221013    41        
--
>500_3676_2103_F3	ENSMUST00000113126	+	2592	2620	10	38	50	182	4C4x1x2T16	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                          |||| ||||XX| ||||||||||||||||
T:               ---------ACCCCGCACccTTACACCACACCACACCT------------
R:         10   T33302010301000331123203111011110111102310033333110    38        
--
>501_1192_643_F3	ENSMUST00000113126	-	2599	2624	16	41	50	180	1x3x3x14x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                |X||X||X|||||||||||||X||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCaGGGT---------
R:         16   T23302010103021033123203111011110111202001000303020    41        
--
>501_1253_2290_F3	ENSMUST00000113126	-	2602	2632	8	38	50	170	2x1x4x2x3x3x13x3	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                        ||XX|||X|X||X||X||||||||||||X||
T:               -------TGgtGTAgAcAGaGGtGTGGTGTGGTGTcAG------------
R:          8   T23133011113113023123203111011110111312333010301131    38        
--
>501_1325_2911_F3	ENSMUST00000113126	+	1099	1117	23	41	50	150	12x4x3	
G:       1099    CAGAACGCCTGGGAGTTCTGCCTGGTTCGCGAGAACAGTTCAAGGGCAGA    1117      
                                       ||||||||||||X|||X||
T:               ----------------------TGGTTCGCGAGAaCAGtTC---------
R:         23   T02330201030313112312133101023332223112002033212321    41        
--
>501_1568_3729_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	1x5x3x10x6	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X||||X||X|||||||||X|||||
T:               -------------AgACAGaGGtGTGGTGTGGtGTCAG------------
R:         14   T23302010323231021123202111011110211212300230233020    38        
--
>501_2917_4763_F3	ENSMUST00000113126	+	2862	2883	27	48	50	180	3x14x5	
G:       2862    CCTTTTCTAATGTCTTCCATTCCTATCTCCCCCCAAAAGAAATATTATTT    2883      
                                           |||X|||||||||||||X||||
T:               --------------------------CTCcCCCCAAAAGAAATaTTAT--
R:         27   T22010303031123121112003131122300001000220032303320    48        
--
>501_3876_3736_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	3x8x10	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||X|||||||X|||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGG-----------
R:         19   T23320103031310231232031110111201112120030223320000    39        
--
>501_4040_406_F3	ENSMUST00000113126	+	298	319	23	44	50	180	3x4x15	
G:        298    GACTTTGGTATTAGAAGACGCTCAAACACAGCTCAAAGATTAGAACGACT    319       
                                       |||X|||X||||||||||||||
T:               ----------------------CAAaCACaGCTCAAAGATTAGA------
R:         23   T23332013123102323333023103111023221002230322302201    44        
--
>501_4170_3247_F3	ENSMUST00000113126	+	2602	2627	20	45	50	180	2x17x2x1x4	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                    ||X||||||||||||||||X|XX|||
T:               -------------------CTgACACCACACCACACCTcTgtCTA-----
R:         20   T23301010123033322333202111011110111102322022323332    45        
--
>502_1589_19_F3	ENSMUST00000113126	-	720	753	2	35	50	186	1x2x4x5A11x2x5x3	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                  |X|X|||X|||| |||||||||||X|X||||X||
T:               -CaGcAATaTGCAAGCAGTAGGCACtGaCATTgTC---------------
R:          2   T20020103031310231213203113111130012203230122122.12    35        
--
>502_1657_4505_F3	ENSMUST00000113126	-	719	754	1	36	50	180	2x2x4x6x11x1x3x2x1x4	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                 ||X|X|||X|||||X||||||||||XX||X|XX|||
T:               TCaGcAATaTGCAGgCAGTAGGCACtgACaTtgTCA--------------
R:          1   T02020103031312231213203113221332212100010121210.21    36        
--
>502_2909_2620_F3	ENSMUST00000113126	-	83	116	11	44	50	180	2x4x3x2x2x12x2x4x3	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGAAATT    83        
                           ||X|||X||X|X|X|||||||||||X|X|||X||
T:               ----------GTcATCaCTgGtCaCGTGTGACTGTcGaATAtGA------
R:         11   T23331010303131323123022213111121211130033012021.01    44        
--
>503_170_3686_F3	ENSMUST00000113126	-	2593	2629	11	47	50	170	x4x2x3x3x8x8x1x2x3x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                           X|||X|X||X||X|||||||X|||||||XX|X||X||
T:               ----------tGTAgAcAGaGGtGTGGTGTgGTGTCAGggTgCTgGG---
R:         11   T13312013313113023123203111011120111212211232200013    47        
--
>503_678_3770_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x14x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X|||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaAT-------------
R:          9   T00133031111202232031110111232000112033120232201322    37        
--
>503_1091_690_F3	ENSMUST00000113126	-	2069	2087	22	40	50	170	13x6	
G:       2087    ATTCTCCCTTATCCAAGTAGAACCACAGCTTTTGTAATCTAAGGAGATCT    2069      
                                      |||||||||||||X|||||
T:               ---------------------ACCACAGCTTTTGtAATCT----------
R:         22   T22010303131123220203111011123200012303220102322223    40        
--
>503_2930_2402_F3	ENSMUST00000113126	+	2593	2622	11	40	50	172	4x1A1T1x2x19	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           ||||X | |X|X||||||||||||||||||
T:               ----------CCCAgAATCcTgACACCACACCACACCTCT----------
R:         11   T23302010300001320323202111011110111102222312333230    40        
--
>503_3481_1508_F3	ENSMUST00000113126	+	2595	2621	13	39	50	190	1x5x4x12x5	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                             |X||||X|||X|||||||||||X||||
T:               ------------CaGCACcCTGaCACCACACCACaCCTC-----------
R:         13   T13020103031313231130213111011110113102230333010113    39        
--
>504_60_2546_F3	ENSMUST00000113126	-	2061	2099	9	47	50	162	1x3x5x1x2x9x2x5A4x2A3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X||X||||XX|X||||||||X|X|||| ||||X| |||
T:               --------CtGAgAGCTccAaCCACAGCTtTtGTAAACTGCcTATTC---
R:          9   T00133031111202232031110111232303113001213223302.1.    47        
--
>504_3795_2118_F3	ENSMUST00000113126	+	2603	2627	16	40	50	170	4x3x11x3x4	
G:       2603    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2627      
                                ||||X||X||||||||||X||X|||
T:               ---------------TGACaCCaCACCACACCTcTGtCTA----------
R:         16   T23322010131313231213103111011110212102232030213.2.    40        
--
>505_208_1281_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111222232031110111202000113010030333312233    36        
--
>505_1177_2570_F3	ENSMUST00000113126	-	2603	2626	14	37	50	180	1x5x3x15	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                              |X||||X||X||||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTCA-------------
R:         14   T23302010303031021121203111011110111211230321200023    37        
--
>505_1252_4885_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T31330201030313312312320111101112011121322333312222    38        
--
>505_2982_2874_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x2x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X|X|||||||
T:               -----------------CAGaGGTGTGGTGTgGtGTCAGGG---------
R:         18   T02330201030313112312320111101112021121200023322232    41        
--
>505_3077_4533_F3	ENSMUST00000113126	-	2072	2096	23	47	50	170	7x2x11x2x3	
G:       2096    CTGCTCATGGATTCTCCCTTATAGAGCTCCAACCACAGCTTTTGTAAATG    2072      
                                       |||||||X|X||||||||||X|X||
T:               ----------------------AGAGCTCcAaCCACAGCTTTtGtAA---
R:         23   T23223330030201030313300222322311101112320031330120    47        
--
>505_3465_2408_F3	ENSMUST00000113126	-	2593	2612	30	49	50	180	14x6	
G:       2612    AGAAATTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGA    2593      
                                              ||||||||||||||X|||||
T:               -----------------------------TGTGGTGTCAGGGTgCTGGG-
R:         30   T13023303030202030010033310333311101112120013321000    49        
--
>506_1729_843_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x14x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X|||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaATC------------
R:          9   T00133031111232232031110111232000111032010232332113    38        
--
>506_2950_2633_F3	ENSMUST00000113126	-	2599	2619	28	48	50	150	1x6x11x3	
G:       2619    AAGAAAGAAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGTAA    2599      
                                            |X|||||X||||||||||X||
T:               ---------------------------GgTGTGGtGTGGTGTCAGgGT--
R:         28   T12103232131003302010303031233111103111011121220133    48        
--
>507_348_4136_F3	ENSMUST00000113126	-	797	824	17	44	50	186	1x5x2x16C3	
G:        824    ACTAAAGTTAGGAATTGAAGCCAAACTTATGAATGGGCTCATTGGCATGC    797       
                                 |X||||X|X||||||||||||||| |||
T:               ----------------GaAGCCaAaCTTATGAATGGGCTCCTTG------
R:         17   T20330201030313332302303011203312031003220201313132    44        
--
>507_1140_4760_F3	ENSMUST00000113126	+	1420	1451	3	34	50	186	2x4x3x1C7x9x5	
G:       1420    TCTAAGCAGCCATGACTACAAGCACCTGTACTTCGAGTCCGACGCAGCCA    1451      
                   ||X|||X||X |||||||X||||||||X||||
T:               --TAaGCAgCCaCGACTACAaGCACCTGTaCTTC----------------
R:          3   T00033231030313212311123110211012021022310001001202    34        
--
>507_2403_2864_F3	ENSMUST00000113126	-	718	750	5	37	50	190	4x6x2x9x2x3x3x4	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                     ||||X|||||X|X||||||||X|X||X||X|||
T:               ----CAATaTGCAGgCaGTAGGCACtGaCAtTGtCAT-------------
R:          5   T10120103031312232213203111111110102131221232002202    37        
--
>507_3187_3621_F3	ENSMUST00000113126	-	2597	2620	19	42	50	180	3x10x7x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||||X||||||X|||
T:               ------------------AGGtGTGGTGTGGtGTCAGGgTGC--------
R:         19   T13020103031310231232031110111102112120211330230120    42        
--
>507_3770_3534_F3	ENSMUST00000113126	-	2595	2625	14	44	50	170	2x3x3x10x2x6x1x4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                              ||X||X||X|||||||||X|X|||||XX|||
T:               -------------GAcAGaGGtGTGGTGTGGtGtCAGGGtgCTG------
R:         14   T23302013031313231232031110111102102120032321221223    44        
--
>508_341_2469_F3	ENSMUST00000113126	-	2599	2623	16	40	50	170	3x3x10x2x7	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                |||X||X|||||||||X|X||||||
T:               ---------------CAGaGGtGTGGTGTGGtGtCAGGGT----------
R:         16   T13020103031311231232031110111100102120012013011300    40        
--
>508_954_2132_F3	ENSMUST00000113126	+	2591	2622	9	40	50	186	3x1A4x2x3x7x11	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                         |||X ||||X|X||X||||||X||||||||||
T:               --------TACcAAGCAcCcTGaCACCACaCCACACCTCT----------
R:          9   T13220103031310231203213111011210111102220032013233    40        
--
>508_1387_4016_F3	ENSMUST00000113126	-	720	754	1	35	50	190	2x2x4x6x10x1x2x3x5	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                 ||X|X|||X|||||X|||||||||XX|X||X||||
T:               TCaGcAATaTGCAGgCAGTAGGCActGaCAtTGTC---------------
R:          1   T02020103031312231213203131111110112002310132231220    35        
--
>508_1971_1800_F3	ENSMUST00000113126	-	2591	2626	13	48	50	160	1x2x3x3x8x2x6x3x1x2x5	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2591      
                             |X|X||X||X|||||||X|X|||||X||XX|X||||
T:               ------------AgAcAGaGGtGTGGTGTgGtGTCAGgGTgcTgGGTA--
R:         13   T23033012121213231232031110111202112121010123001322    48        
--
>508_2256_557_F3	ENSMUST00000113126	-	2604	2622	21	39	50	170	10x9	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAA    2604      
                                     ||||||||||X||||||||
T:               --------------------AGAGGTGTGGtGTGGTGTC-----------
R:         21   T10001230033020000033022201111031110111222323332222    39        
--
>508_2279_2045_F3	ENSMUST00000113126	-	2599	2623	17	41	50	176	3x3x15A3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||||| |||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAAGGT---------
R:         17   T23302010300003322123203111011110111210201021301122    41        
--
>508_2686_3354_F3	ENSMUST00000113126	-	2594	2620	19	45	50	170	3x8x2x6x5x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                                   |||X|||||||X|X|||||X||||X||
T:               ------------------AGGtGTGGTGTgGtGTCAGgGTGCtGG-----
R:         19   T13020103031310231232031110111202112122011311013213    45        
--
>508_3469_2853_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x11x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:          9   T00133031111222232031110111232003123023120223212222    36        
--
>508_3736_3161_F3	ENSMUST00000113126	-	2595	2625	14	44	50	176	2x3x3x8x2x7T5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                              ||X||X||X|||||||X|X|||||| |||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGTTGCTG------
R:         14   T13020103031313231232031110111202112120101321310103    44        
--
>508_3905_1301_F3	ENSMUST00000113126	-	2597	2620	19	42	50	180	3x10x2x9	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||||X|X||||||||
T:               ------------------AGGtGTGGTGTGGtGtCAGGGTGC--------
R:         19   T20020103031310231232031110111102102120011311320101    42        
--
>508_4123_3113_F3	ENSMUST00000113126	+	2593	2624	11	42	50	166	1x3x4x1x7x9x2G4	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                           |X||X|||XX||||||X||||||||X| ||||
T:               ----------CcCAgCACccTGACACcACACCACAcCGCTGT--------
R:         11   T23302010300201331123212111311110111203321133323120    42        
--
>509_2297_4621_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111232232031110111232003113001320221122.21    36        
--
>509_2454_4740_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000112010320222312.22    34        
--
>510_1564_664_F3	ENSMUST00000113126	-	2602	2618	26	42	50	170	17	
G:       2618    AAAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAA    2602      
                                          |||||||||||||||||
T:               -------------------------GTGTGGTGTGGTGTCAG--------
R:         26   T32301101020002010303033003111101111011121233033332    42        
--
>510_2959_2373_F3	ENSMUST00000113126	-	288	322	11	45	50	202	2x3C4G3x10x8x3	
G:        322    GGCCACAGCCCGTTCTAATCTTTGAGCTGTGTTTGAGCGTCTTCTAAATC    288       
                           ||X|| |||| |||X|||||||||X|||||||X||
T:               ----------CGtTCCAATCGTTGaGCTGTGTTTgAGCGTCTtCT-----
R:         11   T10120232311300201032310112321111000223312222222222    45        
--
>510_3222_866_F3	ENSMUST00000113126	-	2601	2619	21	39	50	170	16x3	
G:       2619    AAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                     ||||||||||||||||X||
T:               --------------------GGTGTGGTGTGGTGTCaGG-----------
R:         21   T03300210330313032313301111011110111202030032223011    39        
--
>511_956_1437_F3	ENSMUST00000113126	-	2594	2623	20	49	50	180	1x5x14x2x2x2x4	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGA    2594      
                                    |X||||X|||||||||||||X|X|X|X|||
T:               -------------------CaGAGGtGTGGTGTGGTGTCaGgGtGcTGG-
R:         20   T13223131030020100033022203111011110111232302122103    49        
--
>511_2087_3025_F3	ENSMUST00000113126	+	2603	2627	21	45	50	170	2x3x1x14x5	
G:       2603    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                     ||X||XX|||||||||||||X||||
T:               --------------------TGaCAccACACCACACCTCTgTCTA-----
R:         21   T31030201030333032123311112111110111102223122330132    45        
--
>511_2500_1188_F3	ENSMUST00000113126	+	2595	2621	13	39	50	170	1x4x5x2x10x5	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                             |X|||X||||X|X|||||||||X||||
T:               ------------CaGCAcCCTGaCaCCACACCACaCCTC-----------
R:         13   T00133031011232231200213131011110110102202323010202    39        
--
>511_3108_3776_F3	ENSMUST00000113126	-	719	750	5	36	50	172	3A6x10x1G1x6x3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     ||| ||||||X|||||||||X |X|||||X||
T:               ----CAAAATGCAGgCAGTAGGCAcGGaCATTGtCA--------------
R:          5   T01120100031312231213203133011130102101232222221322    36        
--
>511_3264_839_F3	ENSMUST00000113126	-	719	750	5	36	50	180	x4x4x2x11x2x3x6	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|||X|||X|X||||||||||X|X||X|||||
T:               ----cAATaTGCaGgCAGTAGGCACtGaCAtTGTCA--------------
R:          5   T23320103031332231213203111111110112100302011311302    36        
--
>511_3469_3226_F3	ENSMUST00000113126	+	531	556	7	32	50	180	2x3x5x6x10	
G:        531    TACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAA    556       
                       ||X||X||||X|||||X|||||||||
T:               ------AAgTTtGATGgCAAGGgTCATGTGGG------------------
R:          7   T20221330010212312310203121311100323102011223232103    32        
--
>512_245_3625_F3	ENSMUST00000113126	-	720	748	7	35	50	176	2x6x10G1x1x8	
G:        748    CCTTCTATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                       ||X|||||X||||||||| |XX|||||||
T:               ------ATaTGCAGgCAGTAGGCAGTgaCATTGTC---------------
R:          7   T10020113031312231213203121011130112233223222320222    35        
--
>512_2759_570_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	1x4x3x14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |X|||X||X|||||||||||||X||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCaGG-----------
R:         15   T03302010303031001123203111011110111202033310010312    39        
--
>513_1371_3693_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x7x2x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||X|X|||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAAT-------------
R:          9   T00133031111222232031110111202300113031110303201122    37        
--
>513_2270_1215_F3	ENSMUST00000113126	-	2602	2632	8	38	50	170	3x4x2x2x1x3x12x4	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                        |||X|||X|X|XX||X|||||||||||X|||
T:               -------TGGtGTAgAcAgaGGtGTGGTGTGGTGtCAG------------
R:          8   T23302011103113323103203111011110110212310012323000    38        
--
>514_53_4608_F3	ENSMUST00000113126	-	2065	2098	10	43	50	166	x4x4x1x2x15x1x3T3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                          X|||X|||XX|X||||||||||||||XX|| |||
T:               ---------tGAGaGCTccAaCCACAGCTTTTGTAatCTTCCT-------
R:         10   T22133031011223232031110111232000113112202022331002    43        
--
>514_300_2831_F3	ENSMUST00000113126	-	2595	2631	10	46	50	176	2x2C1x2x3x3x8x2x9x4	
G:       2631    GAAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                          ||X| |X|X||X||X|||||||X|X||||||||X|||
T:               ---------GGtGCAgAcAGaGGtGTGGTGTgGtGTCAGGGTgCTG----
R:         10   T02030201030313112312320311101112021121200123212212    46        
--
>514_457_1892_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	4x4x1x2x9x7	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          ||||X|||XX|X||||||||X||||||
T:               ---------TGAGaGCTccAaCCACAGCTtTTGTAA--------------
R:         10   T33133031211221232031110111232100113011133211101333    36        
--
>514_2296_3867_F3	ENSMUST00000113126	+	2596	2615	14	33	50	160	4x5x11	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                              ||||X||||X||||||||||
T:               -------------AGCAcCCTGaCACCACACCA-----------------
R:         14   T22010103031310231200213111011110122310203313330112    33        
--
>514_2673_1363_F3	ENSMUST00000113126	+	1685	1702	20	37	50	160	11x7	
G:       1685    TGGACCGGAGTCCACCAGCATCCTGTAGTGCCGAGACCCGCAGGCACAGG    1702      
                                    |||||||||||X||||||
T:               -------------------ATCCTGTAGTGcCGAGAC-------------
R:         20   T23023011123101123120320211321120322213330323223011    37        
--
>514_3234_2900_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111222232031110111202000113011120203002100    36        
--
>515_2815_4400_F3	ENSMUST00000113126	-	2602	2628	12	38	50	170	3x2x1x2x5x14	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                            |||X|XX|X||||X|||||||||||||
T:               -----------GTAgAcaGaGGTGtGGTGTGGTGTCAG------------
R:         12   T23131011303313323023201121011110111212233211330.02    38        
--
>515_3505_106_F3	ENSMUST00000113126	-	2601	2629	10	38	50	176	1x3x2x3x3C16	
G:       2629    AATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                          |X||X|X||X|| ||||||||||||||||
T:               ---------TgTAgAcAGaGGCGTGGTGTGGTGTCAGG------------
R:         10   T23302010320130231232033110111101112120210103002.22    38        
--
>515_3528_1203_F3	ENSMUST00000113126	-	2072	2100	8	36	50	170	2x8x1x2x11x2x3	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                        ||X|||||||XX|X||||||||||X|X||
T:               -------TCtGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:          8   T00133032211222232031110111232003123020120333331.30    36        
--
>515_3586_2464_F3	ENSMUST00000113126	+	2584	2619	2	37	50	186	5x5x2x1x3T1x2x13x3	
G:       2584    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                  |||||X||||X|XX|| |X|X||||||||||||X||
T:               -GGCAAgGTACcCagCATCcTgACACCACACCACaCC-------------
R:          2   T01031010131200031323202111011110112101122002322.32    37        
--
>515_4113_333_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T23302010300201021123203111011110111101230200022.31    35        
--
>516_3545_492_F3	ENSMUST00000113126	-	2762	2779	26	43	50	160	9x9	
G:       2779    AAGCAGTGGTGAGACGCAGGGCTACTTTGCAAAGAAGCACACTGATATTA    2762      
                                          |||||||||X||||||||
T:               -------------------------TTTGCAAAGaAGCACACT-------
R:         26   T2330301032031301231222.1010013100230231111212030.0    43        
--
>517_4007_2108_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111222232031110111232000103011131223321222    36        
--
>519_1298_2275_F3	ENSMUST00000113126	-	78	117	9	48	50	166	1x2x4x3x2x9x7G1x1x3x2x4	
G:        117    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGTG    78        
                         |X|X|||X||X|X||||||||X|||||| |XX||X|X|||
T:               --------TgTcATCaCTgGtCACGTGTGaCTGTCGGAtaTGaGcTAG--
R:          9   T20301110031313231230221131111312112302203112023202    48        
--
>520_421_1465_F3	ENSMUST00000113126	-	2594	2614	29	49	50	170	2x9x10	
G:       2614    AAGAAATTCTAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGA    2594      
                                             ||X||||||||X|||||||||
T:               ----------------------------GGtGTGGTGTCaGGGTGCTGG-
R:         29   T02311123233020103031331231230031110111222001132103    49        
--
>520_751_4187_F3	ENSMUST00000113126	-	2593	2625	18	50	50	190	1x2x6x4x13x1x3x3	
G:       2625    AAGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGG    2593      
                                  |X|X|||||X|||X||||||||||||XX||X||
T:               -----------------GaCaGAGGTgTGGtGTGGTGTCAGGGtgCTgGG
R:         18   T10230120033020303031222201211001110111212003032300    50        
--
>520_1252_1497_F3	ENSMUST00000113126	+	2595	2628	13	46	50	200	1x4x2x3x10x2x6x6	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                             |X|||X|X||X|||||||||X|X|||||X|||||
T:               ------------CaGCAcCcTGaCACCACACCaCaCCTCTgTCTAC----
R:         13   T10320103031313231203213111011110012102220122310222    46        
--
>520_1679_482_F3	ENSMUST00000113126	-	2595	2624	19	48	50	172	3x5x1C2x13C4	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAA    2595      
                                   |||X||||X ||X|||||||||||| ||||
T:               ------------------ACAgAGGTgCGGtGTGGTGTCAGGGCGCTG--
R:         19   T13321303233020103031112201233031110111212003332113    48        
--
>520_1993_4774_F3	ENSMUST00000113126	-	2066	2100	13	47	50	170	1x4x1x4x1x2x7x2x10x3	
G:       2100    ATGGATTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCGAG    2066      
                             |X|||XX|||XX|X||||||X|X|||||||||X||
T:               ------------TcTGAgaGCTccAaCCACAGcTtTTGTAATCTgCC---
R:         13   T10210201030313212312320311101112221001130322230300    47        
--
>520_3437_1685_F3	ENSMUST00000113126	-	2530	2552	28	50	50	150	2x1x9x7x4	
G:       2552    GAAGCCTCCAAGTTCAGGCAAGCAGTCTGATTCAGTATAGCAGCAGCAGC    2530      
                                            ||XX||||||||X||||||X|||
T:               ---------------------------TGatTCAGTATAgCAGCAGcAGC
R:         28   T20020103031310231203203313211110212133313123121123    50        
--
>521_457_3931_F3	ENSMUST00000113126	-	2598	2625	14	41	50	180	2x3x3x10x2x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                              ||X||X||X|||||||||X|X|||||||
T:               -------------GAcAGaGGtGTGGTGTGGtGtCAGGGTG---------
R:         14   T13011103031311231232031110111102102120011102302111    41        
--
>521_1803_1201_F3	ENSMUST00000113126	-	2313	2336	7	30	50	160	x7x1x10x6	
G:       2336    CTGTTGACTGTCACACTATATTACCAGCACGCCGAAGCTCAATGACAATG    2313      
                       X||||||XX|||||||||X|||||
T:               ------aCTGTCAcaCTATATTACcAGCAC--------------------
R:          7   T10231031211212312333303111231120332001231213310022    30        
--
>521_2525_3093_F3	ENSMUST00000113126	-	2597	2620	19	42	50	180	3x10x2x9	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||||X|X||||||||
T:               ------------------AGGtGTGGTGTGGtGtCAGGGTGC--------
R:         19   T13020103031310231232031110111102102120011301110220    42        
--
>521_3052_3700_F3	ENSMUST00000113126	-	91	125	1	35	50	176	1x5x2C2x4x3x2x2x13	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                 |X||||X| ||X|||X||X|X|X||||||||||||
T:               CaTTCCtGCGTcATCaCTgGtCaCGTGTGACTGTC---------------
R:          1   T23302011331313231230222131111212112102200103300300    35        
--
>521_3194_2082_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T23032110032330331223203111011110111102223203023231    40        
--
>522_2221_3118_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	14x4x2x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  ||||||||||||||X|||X|X|||
T:               -----------------CAGAGGTGTGGTGTgGTGtCaGGG---------
R:         18   T31130201030313312312220111101112011322200010033303    41        
--
>522_2598_2383_F3	ENSMUST00000113126	-	2600	2621	22	43	50	180	9x9x4	
G:       2621    AAGAAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                      |||||||||X||||||||X|||
T:               ---------------------GAGGTGTGGtGTGGTGTCaGGG-------
R:         22   T13220002233020303033012201111031110111232003302312    43        
--
>522_3232_1315_F3	ENSMUST00000113126	-	2595	2618	25	48	50	180	3x3x15x3	
G:       2618    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGAA    2595      
                                         |||X||X||||||||||||||X||
T:               ------------------------GTGtGGtGTGGTGTCAGGGTGcTG--
R:         25   T10210223033020103033322211131031110111212001102122    48        
--
>523_423_3600_F3	ENSMUST00000113126	-	2600	2625	15	40	50	200	5x2x1x18	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X|XX|||||||||||||||||
T:               --------------GACAGaGgtGTGGTGTGGTGTCAGGG----------
R:         15   T23302010303331121123233111011110111212000113210121    40        
--
>523_562_1894_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x11x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:          9   T00133031111222232031110111232003133000020322201120    36        
--
>524_1332_1228_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x9x7	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X||||||||X||||||
T:               ------------GAGCTccAaCCACAGCTtTTGTAA--------------
R:         13   T00133031111212232031110111232300113012310302210222    36        
--
>524_3121_2251_F3	ENSMUST00000113126	-	2068	2099	9	40	50	200	1x8x1x2x7x10x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X|||||||XX|X||||||X|||||||||X||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAATcTG----------
R:          9   T00133031111222232031110111202000113030210222112112    40        
--
>524_3548_4829_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	5x3x10x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||X|X|||
T:               --------------GACAGaGGtGTGGTGTGGtGtCAG------------
R:         15   T23302010303331121123203111011110212212333332220112    38        
--
>525_197_3259_F3	ENSMUST00000113126	-	2589	2625	14	50	50	182	2x3x3x8x2x6x5C3G3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTACC    2589      
                              ||X||X||X|||||||X|X|||||X|||| ||| |||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGgGTGCCGGGGACC
R:         14   T13020103031313231232031110111202112122011303000210    50        
--
>526_429_1151_F3	ENSMUST00000113126	+	2067	2100	16	49	50	160	1x15x1x1x1x1x5x4x1x4	
G:       2067    TCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAA    2100      
                                |X||||||||||||||XXXXX||||X|||XX|||
T:               ---------------GcAGATTACAAAAGCTgtggtTGGAgCTCtcAGA-
R:         16   T23301010303131111122303110002320233001023322101223    49        
--
>526_507_1643_F3	ENSMUST00000113126	-	2603	2622	21	40	50	180	10x10	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAA    2603      
                                     ||||||||||X|||||||||
T:               --------------------AGAGGTGTGGtGTGGTGTCA----------
R:         21   T32330131033020303030022201111031110111210303232301    40        
--
>526_1871_2353_F3	ENSMUST00000113126	-	87	116	10	39	50	180	2x4x3x2x2x14x3	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    87        
                          ||X|||X||X|X|X|||||||||||||X||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCGaAT-----------
R:         10   T31020103031313231230223131111212112330312223300300    39        
--
>526_3353_4376_F3	ENSMUST00000113126	-	2596	2618	26	48	50	170	4x2x9x8	
G:       2618    AAAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTAA    2596      
                                          ||||X|X||||||||X|||||||
T:               -------------------------GTGTgGtGTGGTGTCaGGGTGCT--
R:         26   T01120003223300010303332223111203111011122200113220    48        
--
>526_3491_2941_F3	ENSMUST00000113126	-	718	751	4	37	50	180	x5x5x1x11x2x3x3x4	
G:        751    CCTGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                    X||||X||||XX||||||||||X|X||X||X|||
T:               ---gCAATaTGCAggCAGTAGGCACtGaCAtTGtCAT-------------
R:          4   T20013103031313231213203113111100122133013222300220    37        
--
>528_141_4292_F3	ENSMUST00000113126	-	2602	2622	22	42	50	170	4x6x11	
G:       2622    AAAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAA    2602      
                                      ||||X|||||X||||||||||
T:               ---------------------AGAGgTGTGGtGTGGTGTCAG--------
R:         22   T02013211003302010303022223111103111011121220320110    42        
--
>528_1606_3832_F3	ENSMUST00000113126	-	81	114	12	45	50	200	4x3x2x2x13x1x6x3	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATATGAGCAATTG    81        
                            ||||X||X|X|X||||||||||||XX|||||X||
T:               -----------CATCaCTgGtCaCGTGTGACTGTCgaATATGaGC-----
R:         12   T11230013031313231230223131111212112000333102310111    45        
--
>528_1848_3045_F3	ENSMUST00000113126	-	2599	2621	19	41	50	170	1x3x13x6	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                   |X||X||||||||||||X|||||
T:               ------------------GaGGtGTGGTGTGGTGTcAGGGT---------
R:         19   T11213012021003032303203111011110111312001021221101    41        
--
>528_2014_255_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000110010232230200131    34        
--
>528_2319_550_F3	ENSMUST00000113126	-	2067	2095	18	46	50	170	1x5x11x4x3x2x3	
G:       2095    ATGGATTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATCTGCGGAG    2067      
                                  |X||||X||||||||||X|||X||X|X||
T:               -----------------GaGCTCcAACCACAGCTtTTGtAAtCtGC----
R:         18   T02330201030323112312322210101112322001030023133100    46        
--
>528_3087_4253_F3	ENSMUST00000113126	-	719	753	2	36	50	190	1x2x4x5x1x11x2x3x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X||||XX||||||||||X|X||X|||||
T:               -CaGcAATaTGCAggCAGTAGGCACtGaCAtTGTCA--------------
R:          2   T20020103031313231213203111111100112100331332001123    36        
--
>528_3325_2696_F3	ENSMUST00000113126	-	2599	2625	14	40	50	170	2x3x3x8x2x9	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                              ||X||X||X|||||||X|X||||||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGGT----------
R:         14   T23320103031313231232031110111202112120010121330110    40        
--
>529_1059_2720_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	2x6x10x1x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               ||X|||||X|||||||||XX|||||
T:               --------------GAcAGAGGtGTGGTGTGGtgTCAGG-----------
R:         15   T23302010323133323122203111011110231212023323323022    39        
--
>529_1828_1827_F3	ENSMUST00000113126	+	2203	2234	15	46	50	186	4x12x5x2x1x1G6	
G:       2203    GGAATTGAGGACCTAGCATGTGCCCAGCGTAAGTGCATGCGTGGGTGCGT    2234      
                               ||||X|||||||||||X||||X|XX ||||||
T:               --------------AGCAtGTGCCCAGCGTaAGTGcAtgGGTGGGT----
R:         15   T23302010303131123121113001233120211212200110010000    46        
--
>529_2242_5035_F3	ENSMUST00000113126	-	2593	2623	20	50	50	176	1x10x9x3A1x3x3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGG    2593      
                                    |X|||||||||X||||||||X|| |X||X||
T:               -------------------CaGAGGTGTGGtGTGGTGTCaGGATgCTgGG
R:         20   T01020220033020003033022201111031110111222023232200    50        
--
>529_3037_4104_F3	ENSMUST00000113126	+	2589	2627	7	45	50	182	2x3G1x4x2x2T14x2x2x5	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                       ||X|| |X|||X|X| ||||||||||||||X|X|X||||
T:               ------GGtACGCaGCAcCcTTACACCACACCACACcTcTgTCTA-----
R:          7   T13312210331330231203203111011110111132322122302122    45        
--
>530_968_3858_F3	ENSMUST00000113126	-	2602	2618	27	43	50	170	17	
G:       2618    GAAAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAA    2602      
                                           |||||||||||||||||
T:               --------------------------GTGTGGTGTGGTGTCAG-------
R:         27   T13022333220300201033312131311110111101112122302002    43        
--
>532_189_3315_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T001330311112222320311101112020001130102302303122..    36        
--
>532_224_597_F3	ENSMUST00000113126	-	412	435	23	46	50	180	2x11x2x9	
G:        435    AGAGCAAGCCCTGGGCAGAAAATGAGGGATTTTTTTTCAAACAGTGCCAC    412       
                                       ||X||||||||||X|X||||||||
T:               ----------------------TGaGGGATTTTTTtTcAAACAGTG----
R:         23   T010003131123123203111011120023000001011001121111..    46        
--
>532_1082_2877_F3	ENSMUST00000113126	+	2610	2627	23	40	50	160	11x7	
G:       2610    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2627      
                                       |||||||||||X||||||
T:               ----------------------ACACCACACCTcTGTCTA----------
R:         23   T130201030313132312032231110111102121122302312310..    40        
--
>532_1957_2058_F3	ENSMUST00000113126	-	2602	2621	19	38	50	180	x20	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                   X|||||||||||||||||||
T:               ------------------gAGGTGTGGTGTGGTGTCAG------------
R:         19   T023302010303131123122011110111101112123203230222..    38        
--
>532_2662_1821_F3	ENSMUST00000113126	-	2602	2629	11	38	50	166	x6x2T3x8x8	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           X|||||X| |||X|||||||X|||||||
T:               ----------tGTAGAcATAGGtGTGGTGTgGTGTCAG------------
R:         11   T133020100031132231332031110111201112122333312130..    38        
--
>533_1305_565_F3	ENSMUST00000113126	-	2592	2620	20	48	50	190	3x15x3x1x3x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2592      
                                    |||X||||||||||||||X||XX||X|||
T:               -------------------AGGtGTGGTGTGGTGTCAgGGtgCTgGGT--
R:         20   T01332011003313013123200111011110111210000332200110    48        
--
>533_2945_560_F3	ENSMUST00000113126	-	2597	2620	20	43	50	180	10x6x5x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    ||||||||||X|||||X||||X||
T:               -------------------AGGTGTGGTGtGGTGTcAGGGtGC-------
R:         20   T32030113031310231233201111011210111012000133311220    43        
--
>534_342_4472_F3	ENSMUST00000113126	-	1922	1949	17	44	50	180	2x7x10x3x2x4	
G:       1949    ACCTGGAGAGCACGCTGAGAAATGTACACTTTTGTTCTTTGTTTCTGGTT    1922      
                                 ||X||||||X|||||||||X||X|X|||
T:               ----------------GAgAAATGTaCACTTTTGTtCTtTgTTT------
R:         17   T2112010303131323123200311011120001112220210032110.    44        
--
>534_780_657_F3	ENSMUST00000113126	-	2593	2620	20	47	50	172	3x16A1C2x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                    |||X||||||||||||||| | ||X|||
T:               -------------------AGGtGTGGTGTGGTGTCAGAGCGCtGGG---
R:         20   T2330201210331332331320311101111011121222333310001.    47        
--
>534_1436_3245_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	3x2x3x12x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||X|X||X|||||||||||X||||
T:               --------------GACaGaGGtGTGGTGTGGTGtCAGG-----------
R:         15   T2330201030333112132320311101111011021201200011020.    39        
--
>535_2103_889_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T10220013031311331231201111011110111232300322310111    36        
--
>535_2189_1928_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	5x3x12x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||X|||||||||||X|X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         15   T03302010303301021123203111011110113232000123221212    40        
--
>535_2274_1057_F3	ENSMUST00000113126	-	721	750	5	34	50	180	4x6x10x1x2x2x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    721       
                     ||||X|||||X|||||||||XX|X|X||||
T:               ----CAATaTGCAGgCAGTAGGCActGaCaTTGT----------------
R:          5   T23120103031312231213203133111230111333330201330312    34        
--
>535_2473_1378_F3	ENSMUST00000113126	-	2598	2621	19	42	50	180	1x3x16x4	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                   |X||X|||||||||||||||X|||
T:               ------------------GaGGtGTGGTGTGGTGTCAGgGTG--------
R:         19   T21131010103333023113203111011110111212201103221122    42        
--
>536_359_242_F3	ENSMUST00000113126	-	1380	1404	23	47	50	170	14x3x2x2x4	
G:       1404    GAGAAGAAATCAGGGCAGCAGTACACCGCGTGACTGGGGCTCTTCTCCAG    1380      
                                       ||||||||||||||X||X|X|X|||
T:               ----------------------ACACCGCGTGACTGgGGcTcTtCTC---
R:         23   T31003020103033311233311111033311212120002023222301    47        
--
>536_372_2705_F3	ENSMUST00000113126	+	2667	2695	17	45	50	170	3x2x13x3x3x1x4	
G:       2667    ACCATGGTCCCGCCTGTGGCAGCATCCTTGGGCCAGGGCCACAGCCGATA    2695      
                                 |||X|X||||||||||||X||X||XX|||
T:               ----------------TGGcAgCATCCTTGGGCCaGGgCCacAGC-----
R:         17   T33010303131123222100133132020100302202300212331232    45        
--
>536_2185_1972_F3	ENSMUST00000113126	-	84	110	17	43	50	190	3x1x10x6x7	
G:        110    GCTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGTGAAATT    84        
                                 |||XX|||||||||X|||||X||||||
T:               ----------------ACTggTCACGTGTGaCTGTCgAATATG-------
R:         17   T23302012303101123123312113111111211222033313222102    43        
--
>536_2909_1774_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302010303031320121203111011110111212220232220021    38        
--
>537_154_259_F3	ENSMUST00000113126	-	731	750	5	24	50	160	4x6x10	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    731       
                     ||||X|||||X|||||||||
T:               ----CAATaTGCAGgCAGTAGGCA--------------------------
R:          5   T33200103031312231213203101031310133103222031233123    24        
--
>537_833_5023_F3	ENSMUST00000113126	+	1039	1064	18	43	50	180	1x6x3x8x8	
G:       1039    GGAGAAGCAGAGTGAGCCTAACATCGCTGTGGACCTGGAGAGCACGCTGG    1064      
                                  |X|||||X||X|||||||X|||||||
T:               -----------------CtAACATcGCtGTGGACCtGGAGAGC-------
R:         18   T22010303131123021333011333311110210310222233102222    43        
--
>537_1201_2076_F3	ENSMUST00000113126	-	720	746	9	35	50	190	5x1x11x2x8	
G:        746    CCTTCTAAATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                         |||||XX||||||||||X|X|||||||
T:               --------ATGCAggCAGTAGGCACtGaCATTGTC---------------
R:          9   T23311011131313231213203113111130112033311111301022    35        
--
>537_1426_2881_F3	ENSMUST00000113126	-	2603	2629	12	38	50	170	2x2x2x3x11x7	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                            ||X|X|X||X||||||||||X||||||
T:               -----------TGtAgAcAGaGGTGTGGTGTgGTGTCA------------
R:         12   T31230201030313312312320111101112011121332322103123    38        
--
>538_1210_4244_F3	ENSMUST00000113126	-	2603	2620	20	37	50	180	18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    ||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCA-------------
R:         20   T330201010213102112332011110111101112112231222202.2    37        
--
>538_2155_4015_F3	ENSMUST00000113126	-	2065	2098	10	43	50	172	8x2x8x2x3x4A2C3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                          ||||||||X|X|||||||X|X||X||| || |||
T:               ---------TGAGAGCTcCaACCACAGcTtTTgTAAACTCCCT-------
R:         10   T001330312112222320000101112223000130012200220020.0    43        
--
>539_690_266_F3	ENSMUST00000113126	-	2599	2625	16	42	50	170	2x3x11x5x2x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||||||||||X||||X|X|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTcAgGGT--------
R:         16   T02330201030313132312320111101112011101300132331022    42        
--
>539_942_3851_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x3x8x10	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||X|||||||X|||||||||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGGG---------
R:         16   T11330201030313112312320311101112011121200003320220    41        
--
>539_2313_2977_F3	ENSMUST00000113126	-	2603	2628	12	37	50	166	1x2A4x3x15	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                            |X| ||||X||X||||||||||||||
T:               -----------GtAAACAGaGGtGTGGTGTGGTGTCA-------------
R:         12   T20302010220303001123203111011110111210103332301220    37        
--
>539_2978_108_F3	ENSMUST00000113126	-	2590	2631	9	50	50	172	2x4x2x2T3x10x6x2x1x1G2x5	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                         ||X|||X|X| |||X|||||||||X|||||X|XX ||X||||
T:               --------GGtGTAgAcATAGGtGTGGTGTGGtGTCAGgGtgGTGgGTAC
R:          9   T23322011303113023133203111011110311212300301130131    50        
--
>539_3137_1148_F3	ENSMUST00000113126	+	2589	2622	7	40	50	172	3x2G1x6x2x11T1x6	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                       |||X| |X|||||X|X|||||||||| |X|||||
T:               ------GGTaCGCaGCACCcTgACACCACACCTCaCCTCT----------
R:          7   T02002010101333231101232111011110223102223330020032    40        
--
>539_3353_4329_F3	ENSMUST00000113126	-	90	124	2	36	50	176	5x1x2x2G3x3x2x2x14	
G:        124    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATTG    90        
                  |||||XX|X| |||X||X|X|X|||||||||||||
T:               -ATTCCtgTgTGATCaCTgGtCaCGTGTGACTGTCG--------------
R:          2   T03302010101123231230223131111212112313012133210023    36        
--
>539_3436_1455_F3	ENSMUST00000113126	-	2591	2624	16	49	50	200	1x3x3x13x3x1x2x8	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                                |X||X||X||||||||||||X||XX|X|||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTcAGggTgCTGGGTA-
R:         16   T23302010302303302123203111011110111112321232100132    49        
--
>539_4178_1308_F3	ENSMUST00000113126	-	719	753	2	36	50	190	1x2x4x5x1x4x7x2x9	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X||||XX|||X||||||X|X||||||||
T:               -CaGcAATaTGCAggCAGtAGGCACtGaCATTGTCA--------------
R:          2   T20020103231313231203203113111130112112201102310301    36        
--
>540_559_3288_F3	ENSMUST00000113126	-	2596	2617	23	44	50	200	19x3	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                       |||||||||||||||||||X||
T:               ----------------------TGTGGTGTGGTGTCAGGGTgCT------
R:         23   T2333301032000101123320311101111011121200133233123.    44        
--
>540_576_3695_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T0013303111120223203111011123200011302112022233312.    36        
--
>540_1120_3071_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||X||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T0013303111120223203111011120200011300003030233023.    36        
--
>540_2727_519_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	6x2x13	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 ||||||X|X||||||||||||
T:               ----------------CAGAGGtGtGGTGTGGTGTCA-------------
R:         17   T1032101030301132312220012101111011121002231203003.    37        
--
>540_4117_945_F3	ENSMUST00000113126	-	2591	2614	17	40	50	180	2x14x3x5	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                 ||X|||||||||||||X||X||||
T:               ----------------GGtGTGGTGTCAGGGTgCTgGGTA----------
R:         17   T2210303111120123203111011121200103200013022321123.    40        
--
>541_74_3473_F3	ENSMUST00000113126	-	2594	2619	24	49	50	186	5x13C3x4	
G:       2619    AAGAAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGTGCTGGA    2594      
                                        |||||X|||||||||||| |||X|||
T:               -----------------------GGTGTgGTGTGGTGTCAGCGTGcTGG-
R:         24   T10211030013022312333313101113011110111212331122101    49        
--
>542_716_1640_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T02330201030313112312320111101112011121333133311222    38        
--
>542_2777_3386_F3	ENSMUST00000113126	+	2595	2615	13	33	50	170	5x5x11	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                             |||||X||||X||||||||||
T:               ------------CAGCAcCCTGaCACCACACCA-----------------
R:         13   T23120110031311231200213111011110102230030322121012    33        
--
>543_454_3465_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T001330311112222320311101112220001130121303.330011.    36        
--
>543_631_3368_F3	ENSMUST00000113126	-	2601	2619	24	42	50	150	1x6x12	
G:       2619    AAGAAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                        |X|||||X|||||||||||
T:               -----------------------GgTGTGGtGTGGTGTCAGG--------
R:         24   T010123030310202010330231311110311101112120.212231.    42        
--
>543_1102_3760_F3	ENSMUST00000113126	+	115	135	26	46	50	180	14x7	
G:        115    CGACAGTCACACGTGACCAGTGATGACACAGGAATGTGTGAGATGGTTCT    135       
                                          ||||||||||||||X||||||
T:               -------------------------ACACAGGAATGTGTgAGATGG----
R:         26   T030020232313020103030311111111202031111222.310210.    46        
--
>543_1680_2092_F3	ENSMUST00000113126	-	82	104	23	45	50	180	9x8x6	
G:        104    GCTCTGTATTTGAATTTTTAGCCACGTGTGACTGTCGAATATGAGAAATT    82        
                                       |||||||||X|||||||X|||||
T:               ----------------------CACGTGTGAcTGTCGAAtATGAG-----
R:         23   T233020103031311231230331131111222112320033.322132.    45        
--
>543_1792_2730_F3	ENSMUST00000113126	-	2597	2617	22	42	50	150	8x2x6x5	
G:       2617    AATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                      ||||||||X|X|||||X||||
T:               ---------------------TGTGGTGTgGtGTCAGgGTGC--------
R:         22   T132201030313102312320311101112021121220113.231323.    42        
--
>543_1994_999_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T001330311112222320311101112020001130003313.210221.    36        
--
>543_2219_537_F3	ENSMUST00000113126	+	2193	2223	5	35	50	182	3G2x2G1x4x17	
G:       2193    GGAATTGAGGACCTAGCATGTGCCCAGCGTAAGTGCATGCGTGGGTGCGT    2223      
                     ||| ||X| |X|||X||||||||||||||||
T:               ----TTGGGGaCGTaGCAtGTGCCCAGCGTAAGTG---------------
R:          5   T002020100031311231211130012331302112123001.021232.    35        
--
>544_525_3473_F3	ENSMUST00000113126	+	2604	2622	23	41	50	170	9x10	
G:       2604    AAGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACC    2622      
                                       |||||||||X|||||||||
T:               ----------------------GACACCACAcCACACCTCT---------
R:         23   T0223020103031300231232021110111201111022221301223.    41        
--
>544_1368_3837_F3	ENSMUST00000113126	+	2604	2626	17	39	50	170	2x1x16x4	
G:       2604    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2626      
                                 ||XX|||||||||||||||X|||
T:               ----------------GAcaCCACACCACACCTCTgTCT-----------
R:         17   T2201030333132300320310111101111022231220201032320.    39        
--
>544_1922_4094_F3	ENSMUST00000113126	-	80	110	16	46	50	176	3x2x2T2x10x2x9	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    80        
                                |||X|X| ||X|||||||||X|X||||||||
T:               ---------------ACTgGtCTCGtGTGACTGTCgAaTATGAGCT----
R:         16   T3230221033131223123022223311121211222333312232033.    46        
--
>544_2972_3510_F3	ENSMUST00000113126	-	2592	2620	20	48	50	156	2x2A3x11x2x3x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2592      
                                    ||X| |||X||||||||||X|X||X||||
T:               -------------------AGgTATGGtGTGGTGTCAGgGtGCtGGGT--
R:         20   T3100223302010303131123133103111011121230313310010.    48        
--
>544_3396_2322_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	3x5x1x2x12x4	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X|||||||||||X|||
T:               ---------TGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:         10   T0233303121120223203111011123200031301311021301210.    36        
--
>544_3600_3384_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T0013303111122223203111011123230011302103032230013.    36        
--
>544_4040_911_F3	ENSMUST00000113126	-	2605	2632	8	35	50	180	5x2x4x1x11x5	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                        |||||X|X|||XX||||||||||X||||
T:               -------TGGTGtAgACAgaGGTGTGGTGTgGTGT---------------
R:          8   T3330201010113302111320111101112011133031201211103.    35        
--
>545_255_2976_F3	ENSMUST00000113126	+	2602	2628	15	41	50	170	1x7x10x1x2x6	
G:       2602    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2628      
                               |X||||||X|||||||||XX|X|||||
T:               --------------CtGACACCaCACCACACCtcTgTCTAC---------
R:         15   T20302010302131231211103111011110312212231231201223    41        
--
>545_3224_1733_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T20302010303300021123203111011110111202311322222221    36        
--
>546_3436_4427_F3	ENSMUST00000113126	-	2588	2614	16	42	50	176	2x13G2x3x6	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTCTCAAAGA    2588      
                                ||X|||||||||||| ||X||X|||||
T:               ---------------GGtGTGGTGTCAGGGGGCtGGgTACCT--------
R:         16   T01030303112312320311101112120000301011310223223220    42        
--
>546_3448_248_F3	ENSMUST00000113126	-	289	320	12	43	50	180	1x5x1x1x3x1x2x18	
G:        320    GCCACAGCCGATTCTAATCTTTGAGCTGTGTTTGAGCGTCTTCTAAATCA    289       
                            |X||||XXX||XX|X|||||||||||||||||
T:               -----------TtCTAAtctTTgaGcTGTGTTTGAGCGTCTTC-------
R:         12   T30220103031312230203003120211110012233122023112020    43        
--
>546_4203_4194_F3	ENSMUST00000113126	+	718	750	15	47	50	176	4x1x5x2x2T10x2x6	
G:        718    GGAGCCGAAGCTCAATGACAATGTCAGTGCCTACTGCCTGCATATTGCTG    750       
                               ||||XX||||X|X| ||||||||||X|X|||||
T:               --------------ATGAcaATGTcAgTTCCTACTGCCTgCaTATTG---
R:         15   T23302013031313231230031111110202312130203333301210    47        
--
>547_900_2010_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x4x14	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||X|||||||||||||
T:               -------------------AGGtGTGgTGTGGTGTCAGGG----------
R:         20   T23302010323330312123203111311110111212002013231.1.    40        
--
>547_966_981_F3	ENSMUST00000113126	-	2072	2099	9	36	50	200	1x8x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111222232031110111232000113021330303300.0.    36        
--
>547_3739_3139_F3	ENSMUST00000113126	-	2599	2625	15	41	50	190	2x3x3x16x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               ||X||X||X|||||||||||||||X||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAGgGT---------
R:         15   T23302010303113323123203111011110111212201310122.0.    41        
--
>548_208_4335_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x12x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||||X||||
T:               ----------------CAGaGGtGTGGTGTGGTGtCAGG-----------
R:         17   T23302010303101102123203111011110112212021322232323    39        
--
>548_246_1732_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x8x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||X|||||||
T:               --------CtGAGAGCTccAaCCACAGCtTTTGTAA--------------
R:          9   T00133031111222232031110111233000113013220212332132    36        
--
>548_2015_3091_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111232232031110111232000113010010333312233    36        
--
>548_4246_662_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000132010230211112223    33        
--
>549_314_3723_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000102130330022222111    33        
--
>549_1297_1012_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000122100230323100123    33        
--
>549_1504_3709_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T02333031111222232031110111232000133030131112202223    37        
--
>549_2610_3707_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111202232011110111232000133003110023312121    36        
--
>549_3134_2468_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000132021130323301122    33        
--
>550_462_1332_F3	ENSMUST00000113126	-	2068	2099	9	40	50	166	1x3x5x1x2x9x7A3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X||||||||X|||||| |||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAAACTG----------
R:          9   T00133031111202232031110111232300113001210223212223    40        
--
>550_3056_2073_F3	ENSMUST00000113126	-	2071	2094	19	42	50	180	4x3x9x8	
G:       2094    ATGGATTCTCCCTTATCCAGCTCCAACCACAGCTTTTGTAATTGAAGGAG    2071      
                                   ||||X||X||||||||X|||||||
T:               ------------------AGCTcCAaCCACAGCTtTTGTAAT--------
R:         19   T13330201030313112312320011101112321001130313300321    42        
--
>551_1980_2320_F3	ENSMUST00000113126	-	2603	2620	20	37	50	160	3x15	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    |||X||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCA-------------
R:         20   T23302010300301311123203111011110111213323201102.12    37        
--
>551_2276_796_F3	ENSMUST00000113126	-	729	750	5	26	50	160	x4x6x12	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGCGCCTGTGATCTGAGAGACAGGT    729       
                     X|||X|||||X|||||||||||
T:               ----cAATaTGCAGgCAGTAGGCACT------------------------
R:          5   T13200103031312231213203112011210210131211320333.12    26        
--
>551_3506_3384_F3	ENSMUST00000113126	-	91	116	10	35	50	160	2x4x3x2x2x13	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                          ||X|||X||X|X|X||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTC---------------
R:         10   T11220103031313231230223131111212112001331321222.22    35        
--
>551_3577_5016_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	3x5x1x2x13x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X||||||||||||X||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:         10   T22133031211202232031110111232000133011311222122.23    36        
--
>552_965_454_F3	ENSMUST00000113126	-	2596	2625	15	44	50	180	2x3x5x6x2x9x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               ||X||X||||X|||||X|X||||||||X||
T:               --------------GAcAGaGGTGtGGTGTgGtGTCAGGGTgCT------
R:         15   T13302010303131022123201101011120211212001332330.02    44        
--
>552_1469_2946_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111222232031110111232000133011210323331.12    36        
--
>552_1776_3770_F3	ENSMUST00000113126	-	2595	2615	21	41	50	170	16x2x3	
G:       2615    TCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGAAAATCCCT    2595      
                                     ||||||||||||||||X|X||
T:               --------------------TGGTGTGGTGTCAGGGtGcTG---------
R:         21   T13030201030313312311310111101112120021221120300.32    41        
--
>552_2775_3624_F3	ENSMUST00000113126	-	2601	2623	16	38	50	170	3x3x8x9	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                |||X||X|||||||X||||||||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGG------------
R:         16   T23302010303131331232031110111301112120310132230.12    38        
--
>552_3388_3735_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113010120222102.22    36        
--
>552_3815_2967_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000102020120320322.03    33        
--
>553_1952_1418_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	5x3x12x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||X|X||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGG-----------
R:         15   T13302010301301321123203111011110110232013122021123    39        
--
>553_2131_237_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010311301031123203111011110111202213332221202    36        
--
>553_2350_4577_F3	ENSMUST00000113126	+	2610	2627	23	40	50	160	11x7	
G:       2610    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2627      
                                       |||||||||||X||||||
T:               ----------------------ACACCACACCTcTGTCTA----------
R:         23   T23301010303001320123203111011110212112230321223121    40        
--
>553_2435_2073_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T13302010300301032123203111011110111102220222020201    40        
--
>553_2498_693_F3	ENSMUST00000113126	-	2594	2623	20	49	50	180	1x10x9x2x2x1x5	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGA    2594      
                                    |X|||||||||X||||||||X|X|XX||||
T:               -------------------CaGAGGTGTGGtGTGGTGTCaGgGtgCTGG-
R:         20   T02133031333020103033022201111031110111222300332102    49        
--
>553_2775_4050_F3	ENSMUST00000113126	-	2588	2614	16	42	50	176	2x13G1x7x3	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTCTCAAAGA    2588      
                                ||X|||||||||||| |X||||||X||
T:               ---------------GGtGTGGTGTCAGGGGGcTGGGTAcCT--------
R:         16   T01030321112312320311101112120000121001330213002311    42        
--
>553_3238_113_F3	ENSMUST00000113126	-	284	305	26	47	50	200	15x7	
G:        305    CCACAGCCGATATCTTATACGACCTTGTGTTTGAGCGTCTTCTAATACAT    284       
                                          |||||||||||||||X||||||
T:               -------------------------TGTGTTTGAGCGTCTtCTAATA---
R:         26   T12120302000313131303320211111100122331221223033011    47        
--
>553_3472_4181_F3	ENSMUST00000113126	-	88	116	10	38	50	170	2x4x3x2x2x13x3	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    88        
                          ||X|||X||X|X|X||||||||||||X||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCgAA------------
R:         10   T13000303031313231230223131111212112120002121010022    38        
--
>553_3794_1697_F3	ENSMUST00000113126	-	2604	2629	11	36	50	166	2x1G5x3x14	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||X |||||X||X|||||||||||||
T:               ----------TGtGGACAGaGGtGTGGTGTGGTGTC--------------
R:         11   T23302010313101021123203111011110111202330331201220    36        
--
>553_4038_1912_F3	ENSMUST00000113126	-	2596	2625	15	44	50	166	x5x3x14G1x3x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               X||||X||X||||||||||||| |X||X||
T:               --------------gACAGaGGtGTGGTGTGGTGTCGGgGTgCT------
R:         15   T23302010323003021123203111011110111230101232203030    44        
--
>554_725_1268_F3	ENSMUST00000113126	-	928	953	19	44	50	200	11x5x4x6	
G:        953    CTGTTCCCATATTGAACACTTCATGGTGACCTTTGTGTTGTCTAGCTCTC    928       
                                   |||||||||||X||||X|||X|||||
T:               ------------------CTTCATGGTGAcCTTTgTGTtGTCTA------
R:         19   T31020103011312331232021310112202003111211223312132    44        
--
>554_1807_2280_F3	ENSMUST00000113126	-	76	116	10	50	50	182	2x3A3x2x2x11x2x5C2x3x4	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGAA    76        
                          ||X|| |||X|X|X||||||||||X|X|||| ||X||X|||
T:               ---------GTcATAACTgGtCaCGTGTGACTGtCgAATACGAgCTaGAA
R:         10   T23302013031313301230222131111212102020331323322220    50        
--
>554_3785_2059_F3	ENSMUST00000113126	-	2598	2625	15	42	50	180	1x4x3x13x3x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                               |X|||X||X||||||||||||X||X|||
T:               --------------GaCAGaGGtGTGGTGTGGTGTcAGgGTG--------
R:         15   T23302010323002001123200111011110111112301123203120    42        
--
>554_3840_3682_F3	ENSMUST00000113126	-	2064	2089	24	49	50	166	2x13x5x2T3	
G:       2089    ATGGATTCTCCCTTATCCAAGTACAACCACAGCTTTTGTAATCTGCCTGG    2064      
                                        ||X||||||||||||X||||X| |||
T:               -----------------------CAaCCACAGCTTTTGtAATCtGTCTG-
R:         24   T11130201030313012312320311101112320001030323112212    49        
--
>554_3946_2968_F3	ENSMUST00000113126	-	722	753	2	33	50	180	1x2x4x6x12x1x3x3	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    722       
                  |X|X|||X|||||X|||||||||||XX||X||
T:               -CaGcAATaTGCAGgCAGTAGGCACTgaCAtTG-----------------
R:          2   T13020103031312231213203112311110122312222233003212    33        
--
>555_75_1852_F3	ENSMUST00000113126	-	2070	2094	14	38	50	170	4x1x2x12x6	
G:       2094    TTCTCCCTTATCCAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                              ||||XX|X|||||||||||X|||||
T:               -------------AGCTccAaCCACAGCTTTTgTAATC------------
R:         14   T22103031011201232031110111232000013032310233312112    38        
--
>555_114_522_F3	ENSMUST00000113126	-	2067	2098	10	41	50	180	x8x1x2x9x7x2x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                          X|||||||XX|X||||||||X||||||X|X||
T:               ---------tGAGAGCTccAaCCACAGCTtTTGTAAtCtGC---------
R:         10   T00133131111222232031110111232200113012313233223001    41        
--
>555_663_1969_F3	ENSMUST00000113126	-	80	114	12	46	50	190	4x3x2x2x12x1x1x7x3	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    80        
                            ||||X||X|X|X|||||||||||XXX||||||X||
T:               -----------CATCaCTgGtCaCGTGTGACTGTcgaATATGAgCT----
R:         12   T11010103031313231230320131111212111200333123320102    46        
--
>555_762_4912_F3	ENSMUST00000113126	-	2061	2099	9	47	50	170	1x3x5x1x2x14x2x1x3x1x3x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X||X||||XX|X|||||||||||||X|XX||XX||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaAtcTGccTGtTC---
R:          9   T00133031111232232031110111232000112011211321302022    47        
--
>555_1085_4664_F3	ENSMUST00000113126	-	2060	2099	9	48	50	166	1x3x5x1x2x9x2x5x4x1x3G3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X||||||||X|X||||X|||XX|| |||
T:               --------CtGAgAGCTccAaCCACAGCTtTtGTAAtCTGccTGGTCA--
R:          9   T00133031111232232031110111232203113002211321012110    48        
--
>555_1284_4085_F3	ENSMUST00000113126	-	2600	2617	23	40	50	160	14x4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                       ||||||||||||||X|||
T:               ----------------------TGTGGTGTGGTGTCaGGG----------
R:         23   T33301010323133023123203111011110111202003230103212    40        
--
>555_1480_708_F3	ENSMUST00000113126	-	2072	2099	9	36	50	200	1x8x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111222232031110111232000113002130312212020    36        
--
>555_2525_3069_F3	ENSMUST00000113126	-	2072	2095	13	36	50	180	5x1x2x16	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X|||||||||||||||
T:               ------------GAGCTccAaCCACAGCTTTTGTAA--------------
R:         13   T00133031111212232031110111232000113002310223301322    36        
--
>555_2715_356_F3	ENSMUST00000113126	+	2593	2625	6	38	50	182	5x2x1G2T5x7x9	
G:       2593    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2625      
                      |||||X|X || |||||X||||||X||||||||
T:               -----CCCAGcAcGCTTACACCaCACCACaCCTCTGTC------------
R:          6   T22010300121123320311103111011310222112023022221222    38        
--
>555_2841_1436_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x3x5x1x2x9x2x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X||||||||X|X|||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTtGTAATCT-----------
R:          9   T00133031111232232031110111232303113032230223321220    39        
--
>555_4258_2968_F3	ENSMUST00000113126	-	729	753	2	26	50	170	1x2x4x6x12	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGCGCCTGTGATCTGAGAGACAGGT    729       
                  |X|X|||X|||||X|||||||||||
T:               -CaGcAATaTGCAGgCAGTAGGCACT------------------------
R:          2   T31020103031312231213203112013200002232210301213320    26        
--
>555_4259_843_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x13x3	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X||||||||||||X||
T:               ------------GAGCTccAaCCACAGCTTTTGtAA--------------
R:         13   T00133131111202232031110111232000133002121133320212    36        
--
>556_962_1420_F3	ENSMUST00000113126	+	2605	2627	23	45	50	190	x6x17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       X|||||X||||||||||||||||
T:               ----------------------aCACCAcACCACACCTCTGTCTA-----
R:         23   T31030201030333002023303111013110111102221122322210    45        
--
>556_1073_1998_F3	ENSMUST00000113126	-	2067	2099	9	41	50	170	1x3x5x1x2x9x7x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                         |X||X||||XX|X||||||||X||||||X|X||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAAtCtGC---------
R:          9   T00133031111232232031110111232300113012113332010102    41        
--
>556_1566_1388_F3	ENSMUST00000113126	+	2610	2625	23	38	50	160	16	
G:       2610    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2625      
                                       ||||||||||||||||
T:               ----------------------ACACCACACCTCTGTC------------
R:         23   T23302010303133323123203111011110222112303312231302    38        
--
>557_675_3638_F3	ENSMUST00000113126	-	2072	2100	8	36	50	170	2x3x5x1x2x12x4	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                        ||X||X||||XX|X|||||||||||X|||
T:               -------TCtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          8   T00013031211232232031110111232000313001100323002.1.    36        
--
>557_1066_4615_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x11x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:          9   T00133031111222232031110111232003123001100301231.2.    36        
--
>557_1096_2812_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111202232031110111232300113000120221202.0.    36        
--
>557_1353_2288_F3	ENSMUST00000113126	-	719	750	5	36	50	186	2x1A13x4x1x1x9	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     ||X |||||||||||||X|||XXX||||||||
T:               ----CAaAATGCAGGCAGTAGgCACtgaCATTGTCA--------------
R:          5   T10300110031312031213223113311130112112202132200.0.    36        
--
>557_2347_4306_F3	ENSMUST00000113126	+	2595	2628	13	46	50	186	1x4x2x2T2x5x5x12	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                             |X|||X|X| ||X||||X||||X|||||||||||
T:               ------------CaGCAcCcTTACaCCACaCCACaCCTCTGTCTAC----
R:         13   T13020103031313231202203131011210113102221122313.1.    46        
--
>557_3597_1233_F3	ENSMUST00000113126	+	2591	2624	9	42	50	180	3x1x5x2x3x10x2x5x3	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                         |||XX||||X|X||X|||||||||X|X||||X||
T:               --------TACccAGCAcCcTGaCACCACACCaCaCCTCtGT--------
R:          9   T33020103031311231203213111011110012102211130101.1.    42        
--
>558_900_1042_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113002320323231122    36        
--
>558_954_1354_F3	ENSMUST00000113126	+	2032	2050	4	22	50	170	3x16	
G:       2032    ATATTATCTTCCTTAAAATCTGTTCCCATATTGAACAGGCAGATTACAAA    2050      
                    |||X|||||||||||||||
T:               ---TTAtCTTCCTTAAAATCTG----------------------------
R:          4   T30210302202020300032213111033031110111232323112213    22        
--
>558_1007_2259_F3	ENSMUST00000113126	-	2602	2627	13	38	50	180	3x4x3x12x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                             |||X|||X||X|||||||||||X|||
T:               ------------TAGaCAGaGGtGTGGTGTGGTGtCAG------------
R:         13   T03302010300003201123203111011110110212211332301110    38        
--
>558_1313_4429_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111222232031110111232000123003320032232233    36        
--
>558_1467_353_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000130131130123312110    33        
--
>558_1613_3593_F3	ENSMUST00000113126	+	2605	2630	23	48	50	180	x16x2x3x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                       X|||||||||||||||X|X||X||||
T:               ----------------------aCACCACACCACACCTcTgTCtACAC--
R:         23   T23302010321303000313203111011110111102022123311122    48        
--
>558_2395_1057_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	3x3x15x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X||||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAgGG----------
R:         17   T23302010303133323123203111011110111213003313030130    40        
--
>558_2763_4039_F3	ENSMUST00000113126	-	2073	2094	16	37	50	160	4x1x12x5	
G:       2094    GATTCTCCCTTATCCAGCTCCAACCACAGCTTTTGTACATGAAGGAGATC    2073      
                                ||||XX|||||||||||X||||
T:               ---------------AGCTccAACCACAGCTTtTGTA-------------
R:         16   T20201030313112312320310101112320101133302021000313    37        
--
>558_3070_3289_F3	ENSMUST00000113126	-	2598	2620	20	42	50	176	3x16A3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                    |||X||||||||||||||| |||
T:               -------------------AGGtGTGGTGTGGTGTCAGAGTG--------
R:         20   T23302010301003320103203111011110111212221113032020    42        
--
>558_3368_306_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111222232031110111232000313001230312012213    36        
--
>558_4091_3350_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111222232031110111232003113000130001232202    36        
--
>558_4281_2979_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x7x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X||||||X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGG---------
R:         18   T02330201030313112312320111101112011121300222020133    41        
--
>559_435_3314_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T23302010300000002103203111011110111102232232232.12    39        
--
>559_450_295_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000102023133301232.01    33        
--
>559_607_318_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T11123010323033030113203111011110111212203112021.21    38        
--
>559_1602_1681_F3	ENSMUST00000113126	-	2601	2617	23	39	50	150	11x6	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                       |||||||||||X|||||
T:               ----------------------TGTGGTGTGGTgTCAGG-----------
R:         23   T23302010300301010123203111011110131212030213321.20    39        
--
>559_2533_3002_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23102010301301331123203111011110111202232031031.01    36        
--
>559_2533_3002_F3	ENSMUST00000113126	+	2594	2621	12	39	50	166	3x4x1x2T13x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            |||X|||XX| |||||||||||||X|||
T:               -----------CCAgCACccTTACACCACACCACAcCTC-----------
R:         12   T23102010301301331123203111011110111202232031031.01    39        
--
>559_2706_2656_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T22130201032310320123203111011110111201223313320.23    36        
--
>559_2966_2623_F3	ENSMUST00000113126	+	2602	2621	20	39	50	180	2x18	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    ||X|||||||||||||||||
T:               -------------------CTgACACCACACCACACCTC-----------
R:         20   T23102010323301021323222111011110111102200320012.21    39        
--
>559_3768_1593_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111222232031110111232000123023130022332.02    36        
--
>559_4073_2635_F3	ENSMUST00000113126	-	2590	2621	19	50	50	190	1x3x15x4x2x1x6	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                                   |X||X||||||||||||||X|||X|XX|||||
T:               ------------------GaGGtGTGGTGTGGTGTCAgGGTgCtgGGTAC
R:         19   T10103231111232212233203111011110111210001033200.11    50        
--
>560_994_1184_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23302010303000300123200111011110111210300230103013    37        
--
>560_1277_4778_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x12x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X|||||||||||X|||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAATC------------
R:          9   T00133031111232232031110111232000313032121000033310    38        
--
>560_1852_1750_F3	ENSMUST00000113126	+	2586	2617	4	35	50	186	3x2x6x3x2x2T13	
G:       2586    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2617      
                    |||X|X|||||X||X|X| |||||||||||||
T:               ---CAAgGtACCCAgCAcCcTTACACCACACCACA---------------
R:          4   T23301010331001031003203111011110111300300023303201    35        
--
>560_2029_3072_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T23302010300003023123203111011110111210221323222202    37        
--
>560_3564_277_F3	ENSMUST00000113126	+	2363	2385	28	50	50	170	3x9x8x3	
G:       2363    TGTCTCCAAGTGGTGCTGAGTTCCCAGCCAGGGTCTTCTCTCATCTCCTC    2385      
                                            |||X||||||||X|||||||X||
T:               ---------------------------CCAgGGTCTTCTcTCATCTCcTC
R:         28   T03002313102311330300033132010100012202202213222322    50        
--
>560_3868_2903_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x3x5x1x2x13x3x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X||||||||||||X||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAtCT-----------
R:          9   T00133031111202232031110111232000103012233223312010    39        
--
>560_4093_695_F3	ENSMUST00000113126	-	910	940	16	46	50	176	x17x1x3x2A4x3	
G:        940    CAGGCAGATTACAAATTTGTGTTGTCTACTTGGATAAGGGAGAATCTAGG    910       
                                X||||||||||||||||XX||X| ||||X||
T:               ---------------tTTGTGTTGTCTACTTGgaTAaGAGAGAaTC----
R:         16   T10030333130200030011110112231201103312222223322302    46        
--
>561_512_4875_F3	ENSMUST00000113126	-	2069	2098	10	39	50	200	3x5x1x2x16x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                          |||X||||XX|X|||||||||||||||X||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGTAAtCT-----------
R:         10   T00133331111202232031110111232000113002230231322221    39        
--
>561_2738_2160_F3	ENSMUST00000113126	-	2596	2625	15	44	50	186	5x3x13T2x3x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                               |||||X||X|||||||||||| ||X||X||
T:               --------------GACAGaGGtGTGGTGTGGTGTTAGgGTgCT------
R:         15   T23302010302203021123203111011110111032201332311132    44        
--
>561_3956_1874_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000101002230322132112    33        
--
>562_334_3969_F3	ENSMUST00000113126	+	2442	2463	29	50	50	170	1x2x19	
G:       2442    TCTCTGACCTATCTCCAATCCTCTTACCGGTGCCTGCTGTGGAGCCAGAC    2463      
                                             |X|X||||||||||||||||||
T:               ----------------------------GgTgCCTGCTGTGGAGCCAGAC
R:         29   T20020103031313231232031110111212302132111022301.21    50        
--
>562_594_3782_F3	ENSMUST00000113126	+	2589	2615	7	33	50	170	2x3x1x5x5x11	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                       ||X||XX||||X||||X||||||||||
T:               ------GGtACccAGCAcCCTGaCACCACACCA-----------------
R:          7   T23302010031311231200213111011110122023002321202.32    33        
--
>562_1201_177_F3	ENSMUST00000113126	+	2605	2626	23	44	50	180	16x1x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       ||||||||||||||||XX||||
T:               ----------------------ACACCACACCACACCTctGTCT------
R:         23   T13033320221013302310303111011110111102311122203.12    44        
--
>562_1305_5037_F3	ENSMUST00000113126	-	2059	2099	9	49	50	186	1x3x5x1x2x14x1G3x1x5x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2059      
                         |X||X||||XX|X|||||||||||||X |||XX||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaGTCTgcCTGTtCAA-
R:          9   T00133031111202232031110111232000110212230021132.32    49        
--
>562_1761_2557_F3	ENSMUST00000113126	+	2591	2623	9	41	50	182	3x1A9x7x4T4x3	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                         |||X |||||||||X||||||X||| ||||X||
T:               --------TACcAAGCACCCTGaCACCACaCCATACCTcTG---------
R:          9   T12310100031310231100213111011210133102021023000.33    41        
--
>562_2615_1400_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	2x2x3x16	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                ||X|X||X|||||||||||||||
T:               ---------------ACaGaGGtGTGGTGTGGTGTCAG------------
R:         16   T03301010301001001323203111011110111212221223110.12    38        
--
>562_3570_4472_F3	ENSMUST00000113126	-	109	129	25	45	50	170	5x3x13	
G:        129    CCCCAAAAGAAATATTATTTGTAGCACACATTCCTGTGTCATCACTAGCA    109       
                                         |||||X||X||||||||||||
T:               ------------------------CACACaTTcCTGTGTCATCAC-----
R:         25   T20003113031313231232033111111330302111121321130.12    45        
--
>562_3571_4133_F3	ENSMUST00000113126	-	2607	2625	15	33	50	170	9x10	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTACTGTTTGAAAAAAAAT    2607      
                               |||||||||X|||||||||
T:               --------------GACAGAGGTgTGGTGTGGT-----------------
R:         15   T23302010303101021122201311011110123223321323322.22    33        
--
>562_3858_4065_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111222232031110111222000113012111311332.22    36        
--
>563_308_2131_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T0013303111123223203111011123200031300011002303233.    36        
--
>563_505_3185_F3	ENSMUST00000113126	-	2602	2627	13	38	50	180	2x2x6x12x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                             ||X|X|||||X|||||||||||X|||
T:               ------------TAgAcAGAGGtGTGGTGTGGTGtCAG------------
R:         13   T2310201030000332212220211101111011221223233233120.    38        
--
>563_1082_3044_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T1011323302010300131020111101111011123221103322222.    36        
--
>563_1456_2845_F3	ENSMUST00000113126	-	2594	2625	15	46	50	192	5x11x4C1C4x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                               |||||X||||||||||X||| | ||||X||||
T:               --------------GACAGaGGTGTGGTGTgGTGCCCGGGTgCTGG----
R:         15   T1330201030000332112020111101110011300300133210321.    46        
--
>563_1553_4266_F3	ENSMUST00000113126	+	2594	2615	12	33	50	160	2x4x5x11	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                            ||X|||X||||X||||||||||
T:               -----------CCaGCAcCCTGaCACCACACCA-----------------
R:         12   T1302011303130323120021311101111010210013302012030.    33        
--
>563_1567_3566_F3	ENSMUST00000113126	-	1435	1464	5	34	50	166	2x3C3x1x5x11x4	
G:       1464    CAAACTGCGTCGGACTCGAAGTACAGGTGCTTGTTCCAGAAGGAGAAGAA    1435      
                     ||X|| |||XX||||X||||||||||X|||
T:               ----CTgCGCCGGacTCGAaGTACAGGTGCtTGT----------------
R:          5   T0233020333030132232321311201131011211330323312030.    34        
--
>563_1600_500_F3	ENSMUST00000113126	+	2597	2622	15	40	50	186	4x1x2T18	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                               ||||XX| ||||||||||||||||||
T:               --------------GCACccTTACACCACACCACACCTCT----------
R:         15   T2330201030030003112320311101111011110222033323302.    40        
--
>563_1820_1226_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T0013303111120223203111011123200311301133032121202.    36        
--
>564_503_468_F3	ENSMUST00000113126	-	2605	2629	11	35	50	170	4x2x3x3x13	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                           ||||X|X||X||X||||||||||||
T:               ----------TGTAgAcAGaGGtGTGGTGTGGTGT---------------
R:         11   T23301012303113023123203111011110111300330332132110    35        
--
>564_619_3267_F3	ENSMUST00000113126	-	2596	2620	25	49	50	176	5x14x1A4	
G:       2620    GAAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTA    2596      
                                         |||||X|||||||||||||X ||||
T:               ------------------------AGGTGtGGTGTGGTGTCAGgATGCT-
R:         25   T01002310132300201030203112011310111101112123231320    49        
--
>564_1525_2660_F3	ENSMUST00000113126	+	2589	2627	7	45	50	174	3x4G1G2x1x2T12x6C4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                       |||X||| | ||XX| ||||||||||||X||||| ||||
T:               ------GGTaCCCGGGACccTTACACCACACCACaCCTCTCTCTA-----
R:          7   T01302010101003002113203111011110112102222222322202    45        
--
>564_3217_2820_F3	ENSMUST00000113126	-	77	116	10	49	50	186	2x4x3x2x2x15x1G2x2x3x3	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGAG    77        
                          ||X|||X||X|X|X||||||||||||||X ||X|X||X||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCGAaGATgAgCTaGA-
R:         10   T21120310031313231230223131111212112322223223321223    49        
--
>564_3588_340_F3	ENSMUST00000113126	-	2593	2619	24	50	50	190	3x4x13x4x3	
G:       2619    AAGAAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGTGCTGGG    2593      
                                        |||X|||X||||||||||||X|||X||
T:               -----------------------GGTgTGGtGTGGTGTCAGGGtGCTgGG
R:         24   T12213033203000303031213101211031110111212003132300    50        
--
>565_1163_1500_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T233020103033010321232031110111101112013323.233231.    36        
--
>565_1359_3398_F3	ENSMUST00000113126	-	77	110	16	49	50	176	3x2x2x13x1C3x6x3	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCTAGAG    77        
                                |||X|X|X||||||||||||X |||X|||||X||
T:               ---------------ACTgGtCaCGTGTGACTGTCgCATAtGAGCTaGA-
R:         16   T232120130313102312302221311112121120313311.232022.    49        
--
>565_2380_2201_F3	ENSMUST00000113126	-	2601	2626	14	39	50	200	1x5x15x5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                              |X||||X||||||||||||||X||||
T:               -------------AgACAGaGGTGTGGTGTGGTGtCAGG-----------
R:         14   T133020100000010211232011110111101122120212.323222.    39        
--
>565_3582_941_F3	ENSMUST00000113126	-	91	124	2	35	50	166	5x1x2x2A3x3x2x2x13	
G:        124    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                  |||||XX|X| |||X||X|X|X||||||||||||
T:               -ATTCCtgTgTAATCaCTgGtCaCGTGTGACTGTC---------------
R:          2   T033020101313032312302231311112121121023012.322220.    35        
--
>565_3811_2401_F3	ENSMUST00000113126	-	77	103	23	49	50	172	9x10A3G3	
G:        103    CTCTGTATTTGAATTTTTAGCAACGTGTGACTGTCGAATATGAGCTAGAG    77        
                                       |||||||||X||||||||| ||| |||
T:               ----------------------ACGTGTGACtGTCGAATATAAGCGAGA-
R:         23   T310201030313102312331131311112101123203333.333222.    49        
--
>566_286_3917_F3	ENSMUST00000113126	-	91	113	14	36	50	170	3x3x2x15	
G:        113    GCTCTGTATTTGAATCACTGGTCACGTGTGACTGTCATATCTTTGAAATT    91        
                              |||X||X|X||||||||||||||
T:               -------------ATCaCTgGtCACGTGTGACTGTC--------------
R:         14   T23302010303112323123002113111121211213333033333022    36        
--
>566_800_895_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111222232031110111202000113001120202320222    36        
--
>566_884_3401_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000112020320122212211    34        
--
>566_1207_3205_F3	ENSMUST00000113126	-	2071	2098	10	37	50	180	4x4x1x2x13x4	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                          ||||X|||XX|X||||||||||||X|||
T:               ---------TGAGaGCTccAaCCACAGCTTTTGtAAT-------------
R:         10   T11133031211221232031110111232000103030311211012032    37        
--
>566_3013_4955_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111222232031110111232000213011310202213332    36        
--
>566_4124_3468_F3	ENSMUST00000113126	-	2067	2099	9	41	50	176	1x8x1x2x13C1x3x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                         |X|||||||XX|X|||||||||||| |X||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGCAaTCtGC---------
R:          9   T00133031111222232031110111232000131132113212133202    41        
--
>567_712_1653_F3	ENSMUST00000113126	-	2060	2099	9	48	50	160	1x3x5x1x2x11x2x3x1x2x1x1x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X||||||||||X|X||XX|XXX||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAAtcTgccTGTTCA--
R:          9   T00133031111202232031110111232003103011230221102110    48        
--
>567_986_3902_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	x18x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       X|||||||||||||||||X||
T:               ----------------------aCACCACACCACACCTCTgTC-------
R:         23   T23102010323031300213203111011110111102222123030021    43        
--
>567_1932_2543_F3	ENSMUST00000113126	-	2601	2624	16	39	50	166	4x3x13A3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                ||||X||X|||||||||||| |||
T:               ---------------ACAGaGGtGTGGTGTGGTGTAAGG-----------
R:         16   T23302010303001301123203111011110111302030233103212    39        
--
>567_2212_681_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111202232031110111232000103000130210302201    36        
--
>567_3887_2191_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x14x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X|||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaATC------------
R:          9   T00133031111202232031110111232000112032300322200123    38        
--
>567_4055_3633_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	x5x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               X||||X||X|||||||||||||X|||
T:               --------------gACAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23302010303201021123202111011110111232003323232222    40        
--
>567_4209_4826_F3	ENSMUST00000113126	-	1271	1291	24	44	50	190	2x19	
G:       1291    GCAGGCACAGGCTGCTGGGCTCTGTAACAGGGTCTATCTCTACTGGTGCG    1271      
                                        ||X||||||||||||||||||
T:               -----------------------GTaACAGGGTCTATCTCTACT------
R:         24   T03130213003000300033203111011200122332222312131003    44        
--
>568_2396_3307_F3	ENSMUST00000113126	-	332	365	11	44	50	186	2x1x5x11C1x2x2x9	
G:        365    AGACCTCACCAATATTTTTGCATTTGATCTGGTTTTGTCTCTCTGCCACA    332       
                           ||XX||||X|||||||||| |X|X|X||||||||
T:               ----------AAtaTTTTtGCATTTGATCCGgTtTtGTCTCTCT------
R:         11   T3202223303302030003131300123203113011122222212222.    44        
--
>568_2888_1214_F3	ENSMUST00000113126	-	2597	2623	18	44	50	190	3x11x8x2x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                  |||X||||||||||X|||||||X|X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAGgGtGC------
R:         18   T0233020103031311231232011110111201112123001333222.    44        
--
>568_4088_2562_F3	ENSMUST00000113126	-	595	624	14	43	50	180	1x2x3x5x1x13x5	
G:        624    CCTCATAGCAAGTTTGGCAGCAGTCTGTCCTGGCTGGAGTGCATCTCCAA    595       
                              |X|X||X||||XX||||||||||||X||||
T:               -------------TtGgCAgCAGTctGTCCTGGCTGGAgTGCA-------
R:         14   T2022103001311231231031210111202103210231131330222.    43        
--
>569_653_45_F3	ENSMUST00000113126	-	2591	2626	14	49	50	180	x6x3x12x4x2x1x2x2x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                              X|||||X||X|||||||||||X|||X|XX|X|X|||
T:               -------------aGACAGaGGtGTGGTGTGGTGtCAGgGtgCtGgGTA-
R:         14   T23302010303201221123203111011110112212200331120132    49        
--
>569_1215_2949_F3	ENSMUST00000113126	-	2588	2612	18	42	50	170	13x1x2x4x5	
G:       2612    CAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCTCTCAAAGA    2588      
                                  |||||||||||||XX|X|||X||||
T:               -----------------TGTGGTGTCAGGGtgCtGGGtACCT--------
R:         18   T01030331112322320311101112120003301002310223330120    42        
--
>569_3462_405_F3	ENSMUST00000113126	+	2286	2303	25	42	50	160	6x12	
G:       2286    TAGCCTTCTAAGGCCTTCTCAACATGTCAGCGCCTGTGATCTGAGAGACA    2303      
                                         ||||||X|||||||||||
T:               ------------------------TGTCAGcGCCTGTGATCT--------
R:         25   T22010303131023000203110311121213302111232221122033    42        
--
>569_3519_3589_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	3x5x1x2x13x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X||||||||||||X||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:         10   T00133031211232232031110111232000133023111321212222    36        
--
>570_3593_1724_F3	ENSMUST00000113126	-	1824	1849	19	44	50	186	4x14T4x3	
G:       1849    ATTGACATCGCTACAGTAGCAGGACACACGGCTGAGCAGCACTCCAAGTC    1824      
                                   ||||X||||||||||||| ||||X||
T:               ------------------GCAGgACACACGGCTGAGTAGCAcTC------
R:         19   T21131012102133112133123211111303212213231022332122    44        
--
>570_4291_3823_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x7x11	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||X||||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAATC------------
R:          9   T00133031111202232031110111222000113032030122332303    38        
--
>571_211_1590_F3	ENSMUST00000113126	+	1944	1967	1	24	50	160	1x6x4x2x11	
G:       1944    TTTCTCTTTCTTTCCTTTTAATAAACAGGTATACTCTTTATCGTGGTTGG    1967      
                 |X|||||X|||X|X||||||||||
T:               TtTCTCTtTCTtTcCTTTTAATAA--------------------------
R:          1   T0102222102220302000303301123123233111011122.202...    24        
--
>571_784_4757_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T0013303111123223203111011123200010303313311.221...    37        
--
>571_1182_3359_F3	ENSMUST00000113126	-	347	364	26	43	50	160	8x10	
G:        364    CCAGATGCCTCTGCAGACCTCACCAATATTTTTGCATTTGATCCATCCTT    347       
                                          ||||||||X|||||||||
T:               -------------------------ATATTTTTgCATTTGATC-------
R:         26   T0023302200030020103131311233300003313001232.132...    43        
--
>571_1609_2989_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	3x2x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||X|X||X|||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030333112132320311101111011120123332.220...    36        
--
>571_2046_1915_F3	ENSMUST00000113126	-	2072	2099	9	36	50	200	1x8x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T0013303111122223203111011123200011301011030.221...    36        
--
>571_2544_2133_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x7x2x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X|X||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAA--------------
R:          9   T0013303111122223203111011120230011302333332.221...    36        
--
>571_2785_2273_F3	ENSMUST00000113126	-	89	114	12	37	50	166	4x3x1C2x15	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    89        
                            ||||X||X ||X||||||||||||||
T:               -----------CATCaCTgCTCaCGTGTGACTGTCGA-------------
R:         12   T2310101033131323123322213111121211232220320.303...    37        
--
>571_2964_1641_F3	ENSMUST00000113126	-	2601	2629	11	39	50	176	2x1G5x3x14x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                           ||X |||||X||X|||||||||||||X||
T:               ----------TGtGGACAGaGGtGTGGTGTGGTGTCaGG-----------
R:         11   T2310201030010102112320311101111011120202333.022...    39        
--
>571_3053_1426_F3	ENSMUST00000113126	-	2606	2625	15	34	50	160	5x3x12	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||X|||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTG----------------
R:         15   T2010201030310112112320311101111011320222230.000...    34        
--
>571_3287_581_F3	ENSMUST00000113126	-	2071	2099	9	37	50	150	1x3x5x1x2x9x2x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||X|X|||||
T:               --------CtGAgAGCTccAaCCACAGCTtTtGTAAT-------------
R:          9   T0013303111123223203111011123230311303013333.131...    37        
--
>572_869_3673_F3	ENSMUST00000113126	+	2603	2622	21	40	50	160	1x13x6	
G:       2603    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                     |X||||||||||||X|||||
T:               --------------------TgACACCACACCACaCCTCT----------
R:         21   T2310201030320101112303211101111011210222230.031...    40        
--
>572_1126_3752_F3	ENSMUST00000113126	-	2075	2098	10	33	50	160	4x4x1x2x13	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                          ||||X|||XX|X||||||||||||
T:               ---------TGAGaGCTccAaCCACAGCTTTTG-----------------
R:         10   T3113303101122123203111011123200010311023022.231...    33        
--
>572_2355_2551_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x3x8x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||X|||||||X|||||||||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGGG---------
R:         18   T0233020103031311231232031110111201112120030.232...    41        
--
>572_2581_103_F3	ENSMUST00000113126	-	2433	2462	2	31	50	166	x8x9x1G3x5x3	
G:       2462    GTCTGGCTCCACAGCAGGCACCGGTAAGAGGCCTCCCCCTGCACTCCAGC    2433      
                  X|||||||X||||||||X |||X||||X||
T:               -tCTGGCTCcACAGCAGGcGCCGgTAAGaGG-------------------
R:          2   T2022103221111231201330311302120010231022032.030...    31        
--
>573_1559_266_F3	ENSMUST00000113126	-	2596	2623	18	45	50	180	3x3x8x8x2x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||X|||||||X|||||||X|X|||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGgGtGCT-----
R:         18   T02330201030313112312320311101112011121230013200.1.    45        
--
>573_2121_2377_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T23302010303101021123203111011110111003320132213.2.    35        
--
>573_2161_1754_F3	ENSMUST00000113126	-	2596	2623	17	44	50	180	3x3x13x2x1x6	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 |||X||X||||||||||||X|XX|||||
T:               ----------------CAGaGGtGTGGTGTGGTGTcAggGTGCT------
R:         17   T23302010223233323123203111011110111313201132331.2.    44        
--
>573_2184_4365_F3	ENSMUST00000113126	-	2065	2099	9	43	50	170	1x3x5x1x2x7x9x2x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                         |X||X||||XX|X||||||X||||||||X|X|X||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAAtCtGcCT-------
R:          9   T00133031111232232031110111212000113002311022301.1.    43        
--
>573_2964_3848_F3	ENSMUST00000113126	-	2602	2623	20	41	50	200	19x3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |||||||||||||||||||X||
T:               -------------------CAGAGGTGTGGTGTGGTGTcAG---------
R:         20   T13030332010000103013122201111011110111312232322.0.    41        
--
>573_2983_2984_F3	ENSMUST00000113126	-	80	116	10	46	50	176	2x2x2x3x2x2x13T1x4x5	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    80        
                          ||X|X|X||X|X|X|||||||||||| |X|||X||||
T:               ---------GTcAtCaCTgGtCaCGTGTGACTGTCTAaTATgAGCT----
R:         10   T13020103031311231230223131111212112233333222321.0.    46        
--
>573_3079_4403_F3	ENSMUST00000113126	-	2064	2089	19	44	50	160	2x13x4x1x1x5	
G:       2089    TTCTCCCTTATCCAAGTACAACCACAGCTTTTGTAATCTGCCTGGATCTT    2064      
                                   ||X||||||||||||X|||XXX||||
T:               ------------------CAaCCACAGCTTTTGtAATctgCCTG------
R:         19   T32133131011203232031110111232000103033103021222.3.    44        
--
>573_3175_3895_F3	ENSMUST00000113126	-	2599	2625	15	41	50	170	2x3x3x8x8x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               ||X||X||X|||||||X|||||||X||
T:               --------------GAcAGaGGtGTGGTGTgGTGTCAGgGT---------
R:         15   T10302010303201322123203111011120111212201020332.2.    41        
--
>573_3413_747_F3	ENSMUST00000113126	-	2066	2099	9	42	50	180	1x3x5x1x2x12x4x3x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCGAGATCTT    2066      
                         |X||X||||XX|X|||||||||||X|||X||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAtCTgCC--------
R:          9   T00133031111232232031110111232000313002223033033.2.    42        
--
>573_4141_2670_F3	ENSMUST00000113126	-	2596	2626	14	44	50	176	1x5x13x4x2x2C3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                              |X||||X||||||||||||X|||X|X| |||
T:               -------------AgACAGaGGTGTGGTGTGGtGTCaGgGCGCT------
R:         14   T23102010300201021121201111011110011202203332201.2.    44        
--
>574_2957_996_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T0013303111122223203111011123200011133022010.033.23    34        
--
>574_3259_1798_F3	ENSMUST00000113126	-	2592	2612	22	42	50	170	11x2x8	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2592      
                                      |||||||||||X|X|||||||
T:               ---------------------TGTGGTGTCAGgGtGCTGGGT--------
R:         22   T0202010303131323123303111011121230213210012.312.31    42        
--
>574_3391_3472_F3	ENSMUST00000113126	-	759	793	5	39	50	182	3x3x2x3x13T2x3G4	
G:        793    TGCATCCAGTGGCGGAAAATCCGTGTCGACCTCCCCATCGTAGCCTTCTA    759       
                     |||X||X|X||X|||||||||||| ||X|| ||||
T:               ----TCCaGTgGcGGaAAATCCGTGTCGTCCtCCGCATC-----------
R:          5   T1123120321001303000320311123120320331320123.223.21    39        
--
>575_1456_2660_F3	ENSMUST00000113126	-	1620	1641	24	45	50	160	x8x14	
G:       1641    GCTCTGTGCCTGTGACCTTGCCGTGTGGCACCAGACTAGAGGCCAGGTGT    1620      
                                        X|||||||X|||||||||||||
T:               -----------------------tGTGGCACcAGACTAGAGGCCA-----
R:         24   T032302010303132123123200111031121221232220..2120..    45        
--
>575_2597_1941_F3	ENSMUST00000113126	-	2592	2612	18	38	50	170	5x11x5	
G:       2612    CAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAGA    2592      
                                  |||||X||||||||||X||||
T:               -----------------TGTGGtGTCAGGGTGCtGGGT------------
R:         18   T010303011123123203111021121200113310011031..0212..    38        
--
>575_3086_923_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320311101112320001311010200..3013..    33        
--
>575_3907_808_F3	ENSMUST00000113126	-	2068	2099	9	40	50	166	1x3x5x1x2x13x3A3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X||||||||||||X|| |||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAACTG----------
R:          9   T001330311112322320311101112320001030012112..2112..    40        
--
>575_4117_3408_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T001330311112222320311101112320001120013100..3323..    34        
--
>576_895_4553_F3	ENSMUST00000113126	-	2067	2099	9	41	50	170	1x3x5x1x2x7x2x7x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                         |X||X||||XX|X||||||X|X||||||X||||
T:               --------CtGAgAGCTccAaCCACAGcTtTTGTAAtCTGC---------
R:          9   T0013303111123223201111011120230011300221330.02232.    41        
--
>576_2266_1449_F3	ENSMUST00000113126	+	2729	2748	24	43	50	160	1x6x13	
G:       2729    TACGACCTGTGTTTAGGACATTTTTTAAATCATTGTGTCTAAGCATCTCA    2748      
                                        |X|||||X||||||||||||
T:               -----------------------TtTAAATcATTGTGTCTAAG-------
R:         24   T1322313133020103031301131030031130111122302.03032.    43        
--
>576_3142_2110_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x11x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||X|||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAG-----------
R:         16   T0233020103031331231232011110111201112122223.20222.    39        
--
>577_869_999_F3	ENSMUST00000113126	+	75	89	29	43	50	150	15	
G:         75    GATGGCCTTCTTGGACAATCCAACTATCATTCTAGCTCATATTCGACAGT    89        
                                             |||||||||||||||
T:               ----------------------------ATTCTAGCTCATATT-------
R:         29   T2332010303131223123203111011230223232213330.02313.    43        
--
>577_1526_2546_F3	ENSMUST00000113126	-	2109	2140	17	48	50	170	3x2x1x2x5x2x12x5	
G:       2140    TCTGACCTCCAAAGAGATGGCACAGTTAAACTACTGGCTAAGCCCTAAAT    2109      
                                 |||X|XX|X||||X|X|||||||||||X||||
T:               ----------------ATGgCacAgTTAAaCtACTGGCTAAGCcCTAA--
R:         17   T0002020103031331231332311103011031210323023.22302.    48        
--
>577_2626_3804_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x9x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X|X||||
T:               --------CtGAGAGCTccAaCCACAGCTtTtGTAA--------------
R:          9   T0013303111122223203111011123230311301321033.23221.    36        
--
>577_4076_3845_F3	ENSMUST00000113126	-	2748	2783	11	46	50	176	x7x2x7x3x7x1G4x4	
G:       2783    AGACGCAGGGCCCCTTTGCAAAGAAGCACACTTGACTCTGAGATGCCTGG    2748      
                           X||||||X|X||||||X||X||||||X ||||X|||
T:               ----------cCCCTTTgCaAAGAAGcACaCTTGACtGTGAGaTGC----
R:         11   T1023333103000020003300220201131201211111221.03032.    46        
--
>578_793_4073_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	3x5x1x2x9x7	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X||||||||X||||||
T:               ---------TGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:         10   T3313303121123223203111011123230011301010032.2121..    36        
--
>579_498_1270_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x10x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X|||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTTtTGTAAT-------------
R:          9   T001330311112022320312101112320101130331323..3312.2    37        
--
>579_503_2368_F3	ENSMUST00000113126	-	2058	2099	9	50	50	170	1x3x5x1x2x7x2x7x3x1x5x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2058      
                         |X||X||||XX|X||||||X|X||||||X||XX||||X||||
T:               --------CtGAgAGCTccAaCCACAGcTtTTGTAAtCTgcCTGTtCAAT
R:          9   T001330311112322320311101112223001130022300..2121.3    50        
--
>579_3194_1473_F3	ENSMUST00000113126	-	2075	2099	9	33	50	156	1x8x2x9G4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||X|X|||||||| ||||
T:               --------CtGAGAGCTcCaACCACAGCGTTTG-----------------
R:          9   T001330311112222320000101112331001300122303..3020.2    33        
--
>580_1093_4080_F3	ENSMUST00000113126	+	2591	2621	9	39	50	176	3x1x5x1G2x11x7	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                         |||XX||||X ||X||||||||||X||||||
T:               --------TACccAGCAcGCTgACACCACACCaCACCTC-----------
R:          9   T223020100313212313332021110111100111022323..2222..    39        
--
>580_3947_1961_F3	ENSMUST00000113126	-	2602	2623	15	36	50	180	3x3x16	
G:       2623    ATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCC    2602      
                               |||X||X|||||||||||||||
T:               --------------CAGaGGtGTGGTGTGGTGTCAG--------------
R:         15   T132010303131123123203111011110111212302103..3222..    36        
--
>581_177_824_F3	ENSMUST00000113126	-	2596	2625	16	45	50	180	2x3x11x6x2x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                ||X||X||||||||||X|||||X|X|||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCaGgGTGCT-----
R:         16   T023302010303133123123201111011120111222301..0321..    45        
--
>581_1109_3862_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	1x3x2x3x16	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X||X|X||X|||||||||||||||
T:               -------------AgACaGaGGtGTGGTGTGGTGTCAG------------
R:         14   T233010103033311210232031110111101112122033..2212..    38        
--
>581_1623_663_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T001330311112322320311101112320001330002303..3210..    36        
--
>581_2291_1482_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320311101112320001221000103..1110..    33        
--
>581_2319_3736_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x11x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:          9   T001330311112222320311101112320031330210303..3120..    36        
--
>581_2358_2723_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T231020103003013011232031110111101112022233..3120..    36        
--
>581_2462_2019_F3	ENSMUST00000113126	+	2601	2627	19	45	50	176	1x2T18x5	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                   |X| ||||||||||||||||||X||||
T:               ------------------CcTTACACCACACCACACCTCTgTCTA-----
R:         19   T233220103013030211132031110111101111022231..2222..    45        
--
>581_2586_3997_F3	ENSMUST00000113126	-	2599	2625	16	42	50	210	2x14x8x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X|||||||||||||X|||||||X||
T:               ---------------GAcAGAGGTGTGGTGTgGTGTCAGgGT--------
R:         16   T313302010303133123122201111011120111212301..1121..    42        
--
>581_3048_4138_F3	ENSMUST00000113126	-	2075	2099	9	33	50	190	1x8x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||X|X|||||||||||||
T:               --------CtGAGAGCTcCaACCACAGCTTTTG-----------------
R:          9   T001330311112222320000101112320001020112201..3322..    33        
--
>581_3342_9_F3	ENSMUST00000113126	-	2066	2098	10	42	50	190	8x1x2x13x1x2x3x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCGAGATCTT    2066      
                          ||||||||XX|X||||||||||||XX|X||X||
T:               ---------TGAGAGCTccAaCCACAGCTTTTGtaAtCTgCC--------
R:         10   T031330311112222320311101112320001320222330..3121..    42        
--
>581_3759_4113_F3	ENSMUST00000113126	-	79	116	11	48	50	180	2x2x5x2x10x3x5x1x5x3	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTATT    79        
                           ||X|X||||X|X|||||||||X||X||||XX||||X||
T:               ----------GTcAtCACTgGtCACGTGTGAcTGtCGAAtaTGAGcTA--
R:         11   T233020103031311211230221131111202122320013..0223..    48        
--
>581_3976_2789_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320311101112320001303133310..3020..    33        
--
>581_4231_2508_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	4x14	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||X|||||||||||||
T:               ----------------------ACACcACACCACACCTCT----------
R:         23   T001030313112322122330331113111101111022222..2333..    40        
--
>582_833_3744_F3	ENSMUST00000113126	-	2075	2098	10	33	50	180	8x1x2x13	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                          ||||||||XX|X||||||||||||
T:               ---------TGAGAGCTccAaCCACAGCTTTTG-----------------
R:         10   T001333311112222320311101112320001221020200..220322    33        
--
>582_1753_11_F3	ENSMUST00000113126	-	2059	2099	9	49	50	222	1x3x5x1x2x16A3G8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2059      
                         |X||X||||XX|X||||||||||||||| ||| ||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAAACTGGCTGTTCAA-
R:          9   T001330311112322320311101112320001130012103..202102    49        
--
>582_3472_2787_F3	ENSMUST00000113126	-	730	753	2	25	50	160	2x1x4x6x11	
G:        753    CCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                  ||XX|||X|||||X||||||||||
T:               -CAgcAATaTGCAGgCAGTAGGCAC-------------------------
R:          2   T131301030313122312132031102212101233022020..203120    25        
--
>583_3885_1416_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T001330311112022320311101112320001330312212..1112.2    37        
--
>584_845_2763_F3	ENSMUST00000113126	-	91	116	10	35	50	160	2x4x3x2x2x13	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                          ||X|||X||X|X|X||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTC---------------
R:         10   T200201030313132312302231311112121121022032..32033.    35        
--
>584_1119_3166_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T023302010303133123123201111011120111211300..31233.    38        
--
>584_2563_1882_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	3x2x3x10x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||X|X||X|||||||||X|||||
T:               --------------GACaGaGGtGTGGTGTGGtGTCAG------------
R:         15   T222020103032301212232031110111102112122000..22222.    38        
--
>584_3028_3705_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320311101112320001333003301..32232.    33        
--
>584_3425_1580_F3	ENSMUST00000113126	-	709	751	4	46	50	196	1x4x6x12x1x2x1x4A1x2x8	
G:        751    CCTGCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCGAGGT    709       
                    |X|||X|||||X|||||||||||XX|XX||| |X|X|||||||
T:               ---GcAATaTGCAGgCAGTAGGCACTgaCatTGTAAtTgAGCTTCG----
R:          4   T020301030313122312132031123112201130002223..33222.    46        
--
>585_71_3658_F3	ENSMUST00000113126	-	2594	2614	18	38	50	170	11x5x5	
G:       2614    AACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGAAATCCCTCAAA    2594      
                                  |||||||||||X||||X||||
T:               -----------------GGTGTGGTGTCaGGGTgCTGG------------
R:         18   T320103031311233032011110111202001332101202..0103..    38        
--
>585_3486_2494_F3	ENSMUST00000113126	-	720	753	2	35	50	172	1x2x4x6x11x1C2T5	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                  |X|X|||X|||||X||||||||||X || |||||
T:               -CaGcAATaTGCAGgCAGTAGGCACtCACTTTGTC---------------
R:          2   T130201030313122312132031102112001122113111..1232..    35        
--
>585_3863_2622_F3	ENSMUST00000113126	-	2594	2614	22	42	50	170	11x4x6	
G:       2614    TCTAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGAAATCCCT    2594      
                                      |||||||||||X|||X|||||
T:               ---------------------GGTGTGGTGTCaGGGtGCTGG--------
R:         22   T212302010303131123122201111011120200313210..3220..    42        
--
>586_3237_1759_F3	ENSMUST00000113126	-	89	114	12	37	50	166	4x2x2x2G15	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    89        
                            ||||X|X|X| |||||||||||||||
T:               -----------CATCaCtGgTGACGTGTGACTGTCGA-------------
R:         12   T2301231303131323131311213111121211232320013.3002..    37        
--
>586_4187_3534_F3	ENSMUST00000113126	-	2068	2099	9	40	50	160	1x3x5x1x2x7x2x7x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X||||||X|X||||||X|||
T:               --------CtGAgAGCTccAaCCACAGcTtTTGTAAtCTG----------
R:          9   T0233303111120223203111011120230011300221131.2000..    40        
--
>586_4220_3527_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T0013303111123223203111011123230011300010321.3011..    36        
--
>587_1506_3402_F3	ENSMUST00000113126	-	2605	2628	12	35	50	160	3x5x1x2x13	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                            |||X||||XX|X||||||||||||
T:               -----------GTAgACAGagGtGTGGTGTGGTGT---------------
R:         12   T233020103003133211230031110111101110003332..20312.    35        
--
>587_1883_2384_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T001330311112222320311101112320003130032230..32212.    36        
--
>587_2225_2336_F3	ENSMUST00000113126	-	2072	2100	8	36	50	170	2x3x5x1x2x13x3	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                        ||X||X||||XX|X||||||||||||X||
T:               -------TCtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          8   T110130312112322320311101112320001330101302..23102.    36        
--
>588_3543_4725_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111202232031110111232200113011.202..3020..    36        
--
>589_1212_1492_F3	ENSMUST00000113126	-	2601	2629	9	37	50	176	4x2x3C2x14x3	
G:       2629    ATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATCC    2601      
                         ||||X|X|| ||X|||||||||||||X||
T:               --------TGTAgAcAGCGGtGTGGTGTGGTGTCaGG-------------
R:          9   T02221333011312312330311101111011122203232323000213    37        
--
>589_1824_2854_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000131001120103012103    33        
--
>589_3031_307_F3	ENSMUST00000113126	+	1954	1972	31	49	50	170	3x16	
G:       1954    ACAAAGAACAAAAGTGTACATTTCTCTTTCTTTCCTTTTAATAAACAGGT    1972      
                                               |||X|||||||||||||||
T:               ------------------------------TTTcCTTTTAATAAACAGG-
R:         31   T30123111131103301313100123013210010200030330011203    49        
--
>590_3420_2649_F3	ENSMUST00000113126	+	2345	2373	18	46	50	240	6x7x16	
G:       2345    TGTGACAGTGTCTCCAAGTGGTGCTGAGTTCCCAGCCAGGGTCTTCTCTC    2373      
                                  ||||||X||||||X|||||||||||||||
T:               -----------------GTGGTGcTGAGTTcCCAGCCAGGGTCTTC----
R:         18   T1022313112312320201101112122103001230120012.32321.    46        
--
>591_680_68_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T2330201030033112112320311101111011120010102.0111.2    36        
--
>591_3372_3426_F3	ENSMUST00000113126	-	334	365	11	42	50	166	2x1x5x11C1x2x2x7	
G:        365    AGACCTCACCAATATTTTTGCATTTGATCTGGTTTTGTCTCTGGGCCACA    334       
                           ||XX||||X|||||||||| |X|X|X||||||
T:               ----------AAtaTTTTtGCATTTGATCCGgTtTtGTCTCT--------
R:         11   T2223030323302030003131300123203111011122223.1321.2    42        
--
>592_122_4304_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x13x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||||X||||
T:               ---------------GAcAGaGGTGTGGTGTGGtGTCA------------
R:         16   T11030201030303312312120111101111021121.203..010...    38        
--
>592_175_788_F3	ENSMUST00000113126	-	715	746	9	40	50	170	5x12x1x1x3x2x4x4	
G:        746    CCTTCTAAATGCAGGCAGTAGGCACTGACATTGTCATTGAAGAGACAGGT    715       
                         |||||X|||||||||||XXX||X|X|||X|||
T:               --------ATGCAgGCAGTAGGCACtgaCAtTgTCAtTGA----------
R:          9   T01313113031313031213203111011110212100.100..320...    40        
--
>592_1650_1133_F3	ENSMUST00000113126	-	765	785	13	33	50	170	16x1x4	
G:        785    TGCATGCGTGGGCGGAAAATCCGTGTCGACCTCGCGTGCGTAGCCTTCTA    765       
                             ||||||||||||||||XX|||
T:               ------------CGGAAAATCCGTGTCGacCTC-----------------
R:         13   T12010302121123020003203111233302233101.332..222...    33        
--
>592_2579_366_F3	ENSMUST00000113126	+	2598	2622	16	40	50	180	7x1x13x4	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                |||||||XX||||||||||||X|||
T:               ---------------CACCCTGacACCACACCACACcTCT----------
R:         16   T13302010313221001100213311011110111112.203..102...    40        
--
>592_3285_1911_F3	ENSMUST00000113126	-	2066	2099	9	42	50	170	1x3x5x1x2x9x7x1x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCGAGATCTT    2066      
                         |X||X||||XX|X||||||||X||||||XX||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAAtcTGCC--------
R:          9   T00133031111202232031110111232300113021.130..312...    42        
--
>592_3745_195_F3	ENSMUST00000113126	-	2063	2099	9	45	50	180	1x3x5x1x2x13x4x3x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTATCTT    2063      
                         |X||X||||XX|X||||||||||||X|||X||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAATcTGcCTGT-----
R:          9   T00133031111202232031110111232000133031.100..331...    45        
--
>593_3986_4798_F3	ENSMUST00000113126	-	2592	2612	22	42	50	170	13x3x5	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2592      
                                      |||||||||||||X||X||||
T:               ---------------------TGTGGTGTCAGGGtGCtGGGT--------
R:         22   T12013103031313231232031110111212003133100103012121    42        
--
>594_2125_2506_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320311101112320001220123222..303..2    33        
--
>594_3277_143_F3	ENSMUST00000113126	-	2068	2099	9	40	50	180	1x3x5x1x2x13x3x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X||||||||||||X||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAtCTG----------
R:          9   T001330311112022320311101112320001330122101..200..1    40        
--
>596_2777_1059_F3	ENSMUST00000113126	-	2069	2099	9	39	50	190	1x3x5x1x2x7x12	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X||||||X|||||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAATCT-----------
R:          9   T00133031111202232031110111222000113032230023031122    39        
--
>597_1626_858_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320311101112320001220001103..3212.0    33        
--
>598_409_2315_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x14x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X|||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaAT-------------
R:          9   T001330311112022320311101112320001120311103..302..1    37        
--
>598_2480_1113_F3	ENSMUST00000113126	+	2600	2623	18	41	50	166	1x3T13x6	
G:       2600    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                  |X|| |||||||||||||X|||||
T:               -----------------CcCTTACACCACACCACAcCTCTG---------
R:         18   T233020103212300013202031110111101112022212..323..2    41        
--
>598_2662_3484_F3	ENSMUST00000113126	-	2602	2620	20	38	50	150	3x10x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||X|||||
T:               -------------------AGGtGTGGTGTGGtGTCAG------------
R:         20   T301020103030310331232031110111102112123331..230..3    38        
--
>599_1054_2655_F3	ENSMUST00000113126	-	2596	2620	24	48	50	170	5x1x2x12x5	
G:       2620    AAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAA    2596      
                                        |||||XX|X|||||||||||X||||
T:               -----------------------AGGTGtgGtGTGGTGTCAGGgTGCT--
R:         24   T10033222110303010303132120113203111011121203113220    48        
--
>600_55_1196_F3	ENSMUST00000113126	-	2067	2099	9	41	50	210	1x8x1x2x7x11x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                         |X|||||||XX|X||||||X||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAATCtGC---------
R:          9   T001330311112222320311101112020001130323132312302.3    41        
--
>600_1310_291_F3	ENSMUST00000113126	-	1378	1403	21	46	50	180	2x4x8x9x3	
G:       1403    AAGAAATCAGGGCAGCAGTGCACCGCGTGACTGGGGCTCTTCTCCTGCCC    1378      
                                     ||X|||X|||||||X||||||||X||
T:               --------------------CAcCGCgTGACTGGgGCTCTTCTcCT----
R:         21   T130131030313132312122130331112121020322202210232.3    46        
--
>601_722_5025_F3	ENSMUST00000113126	-	2071	2094	17	40	50	160	4x1x13x2x4	
G:       2094    GGATTCTCCCTTATCCAGCTCCAACCACAGCTTTTGTAATTGAAGGAGAT    2071      
                                 ||||XX||||||||||||X|X|||
T:               ----------------AGCTccAACCACAGCTTTtGtAAT----------
R:         17   T110201030313132312320310101112320021030303..0310..    40        
--
>601_863_2911_F3	ENSMUST00000113126	+	112	130	22	40	50	170	5x14	
G:        112    GACAGTCACACGTGACCAGTGATGACACAGGAATGTGTGAGATGGTTCTC    130       
                                      |||||X|||||||||||||
T:               ---------------------ATGACaCAGGAATGTGTGA----------
R:         22   T130302010303232123113131213112020311111210..2122..    40        
--
>602_1498_3715_F3	ENSMUST00000113126	+	939	970	18	49	50	180	1x3x1x5x11x2x4x5	
G:        939    TCCAAGTAGACAACACAAAGGTCACCATGAAGGAGATCTTGCTCAAGGCA    970       
                                  |X||XX||||X||||||||||X|X|||X||||
T:               -----------------AaGGtcACCAtGAAGGAGATCtTgCTCaAGGC-
R:         18   T13020103031313231232031110111202022232303322302030    49        
--
>603_871_4081_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x8x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||X|||||||
T:               --------CtGAGAGCTccAaCCACAGCtTTTGTAA--------------
R:          9   T001330311112222320311101112330001130001333..0020.2    36        
--
>603_889_1296_F3	ENSMUST00000113126	-	448	482	16	50	50	166	1x5x1x1x10x7A5x4	
G:        482    CTGCTGCTGCTGCTGGCGTACAGACAATATGGACTGCTTGCCTGAACTTG    448       
                                |X||||XXX|||||||||X|||||| |||||X|||
T:               ---------------GcGTACagaCAATATGGAcTGCTTGACTGAAcTTG
R:         16   T220103031311230303131231110333102321320121..3022.2    50        
--
>603_1934_2625_F3	ENSMUST00000113126	+	2626	2651	22	47	50	160	12x4x2x3x5	
G:       2626    ACACCACACCACACCTCTGTCTACACCAGATGCCTCTGCAGACCTCACCA    2651      
                                      ||||||||||||X|||X|X||X||||
T:               ---------------------TACACCAGATGCcTCTgCaGAcCTCA---
R:         22   T331232221210103023322031110122313322233322..2212.1    47        
--
>603_4118_558_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x8x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||X|||||||
T:               --------CtGAGAGCTccAaCCACAGCtTTTGTAA--------------
R:          9   T001330311112222320111101112330001130210113..2100.1    36        
--
>604_1404_3352_F3	ENSMUST00000113126	+	536	554	12	30	50	170	8x11	
G:        536    TACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAA    554       
                            ||||||||X||||||||||
T:               -----------TGATGGCAaGGGTCATGTG--------------------
R:         12   T010303111213123103132001213111122210310022..32220.    30        
--
>604_1821_2059_F3	ENSMUST00000113126	-	2603	2632	8	37	50	200	3x4x2x3x3x15	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                        |||X|||X|X||X||X||||||||||||||
T:               -------TGGtGTAgAcAGaGGtGTGGTGTGGTGTCA-------------
R:          8   T233120101031133231232031110111101112113333..03023.    37        
--
>604_2110_1863_F3	ENSMUST00000113126	+	2610	2626	23	39	50	150	11x6	
G:       2610    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2626      
                                       |||||||||||X|||||
T:               ----------------------ACACCACACCTcTGTCT-----------
R:         23   T233010103231333331232031110111102121122032..32013.    39        
--
>604_2497_1958_F3	ENSMUST00000113126	-	2599	2631	9	41	50	190	2x4x2x3x3x10x6x3	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                         ||X|||X|X||X||X|||||||||X|||||X||
T:               --------GGtGTAgAcAGaGGtGTGGTGTGGtGTCAGgGT---------
R:          9   T233020100031131231232031110111103112122013..20022.    41        
--
>604_3740_3448_F3	ENSMUST00000113126	+	571	608	10	47	50	180	1x7x1x2x2x1x1x2x1x20	
G:        571    CTGCAACTAAGAAGATCGACGTCTACCTCCCCCTGCACTCCAGCCAGGAC    608       
                          |X||||||XX|X|XXX|XX|||||||||||||||||||
T:               ---------AgAAGATCgaCgTctaCctCCCCCTGCACTCCAGCCAG---
R:         10   T001330311112022320311101112120000213112201..31232.    47        
--
>605_299_4294_F3	ENSMUST00000113126	+	2190	2222	1	33	50	176	2x4x1x2x2G9x9x3	
G:       2190    GAATTGAGGACCTAGCATGTGCCCAGCGTAAGTGCATGCGTGGGTGCGTG    2222      
                 ||X|||XX|X| |||||||||X||||||||X||
T:               GAaTTGagGaCGTAGCATGTGcCCAGCGTAaGT-----------------
R:          1   T1223010103131323131112001233131212231120022133122.    33        
--
>605_2319_4594_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T0013303111120223203111011123200010303110030112110.    37        
--
>605_3360_1082_F3	ENSMUST00000113126	-	2065	2099	9	43	50	170	1x3x5x1x2x12x2x4x1x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                         |X||X||||XX|X|||||||||||X|X|||XX|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTaATCtgCCT-------
R:          9   T0013303111120223203111011123200021203213302221133.    43        
--
>605_4276_4518_F3	ENSMUST00000113126	-	1496	1515	24	43	50	160	6x11x3	
G:       1515    CGTGCTCAAGGTTAACTACATCCCTCGTGATTCCAGGATGTAGGCCCGAG    1496      
                                        ||||||X||||||||||X||
T:               -----------------------CTCGTGaTTCCAGGATGtAG-------
R:         24   T1021010303131323121110312231133020120231032033111.    43        
--
>606_644_813_F3	ENSMUST00000113126	-	2591	2615	19	43	50	176	3x16x2T3	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2591      
                                   |||X|||||||||||||||X| |||
T:               ------------------TGGtGTGGTGTCAGGGTGCtGTGTA-------
R:         19   T13200103031313231231031110111212001133111133320221    43        
--
>607_2032_2749_F3	ENSMUST00000113126	-	2602	2623	21	42	50	180	1x4x17	
G:       2623    AAAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAA    2602      
                                     |X|||X||||||||||||||||
T:               --------------------CaGAGgTGTGGTGTGGTGTCAG--------
R:         21   T10030221013002010303022223111101111011121223322220    42        
--
>607_3265_2360_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x14x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X|||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTaAT-------------
R:          9   T00133031111222232031110111232000111030320023332022    37        
--
>609_1833_2132_F3	ENSMUST00000113126	-	2071	2099	9	37	50	150	1x3x5x1x2x11x2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||X|X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAAT-------------
R:          9   T001330311112322320311101112320031330300103..2321..    37        
--
>609_3734_4050_F3	ENSMUST00000113126	-	2593	2615	19	41	50	170	1x2x13x7	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGAATCCCTCA    2593      
                                   |X|X||||||||||||X||||||
T:               ------------------TgGtGTGGTGTCAGGGtGCTGGG---------
R:         19   T132201030313112312320311101112120021321003..2302..    41        
--
>610_1258_3752_F3	ENSMUST00000113126	-	2597	2621	22	46	50	180	x5x4x16	
G:       2621    AAGAAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGTGCAAAA    2597      
                                      X||||X|||X|||||||||||||||
T:               ---------------------gAGGTgTGGtGTGGTGTCAGGGTGC----
R:         22   T302303330310203000330122012110311101112120.3133323    46        
--
>611_341_3848_F3	ENSMUST00000113126	-	2591	2614	24	47	50	200	13x7x4	
G:       2614    ATTCTAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCC    2591      
                                        |||||||||||||X||||||X|||
T:               -----------------------GGTGTGGTGTCAGgGTGCTGgGTA---
R:         24   T12223122010303331323123201111011121220113213013200    47        
--
>611_3522_742_F3	ENSMUST00000113126	-	2598	2626	14	42	50	190	1x8x2x13x1x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                              |X|||||||X|X||||||||||||XX|||
T:               -------------AgACAGAGGtGtGGTGTGGTGTCAggGTG--------
R:         14   T23302010300230121122203131011110111210101111110100    42        
--
>611_4273_4418_F3	ENSMUST00000113126	+	2061	2087	16	42	50	170	1x2x10x9x1x4	
G:       2061    ATCTGTTCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTC    2087      
                                |X|X|||||||||X||||||||XX|||
T:               ---------------GaAcAGGCAGATTaCAAAAGCTgtGGT--------
R:         16   T10110323022010301031203122300110002323210123323102    42        
--
>612_2072_2667_F3	ENSMUST00000113126	-	2592	2612	18	38	50	170	14x4x3	
G:       2612    CAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAGA    2592      
                                  ||||||||||||||X|||X||
T:               -----------------TGTGGTGTCAGGGTgCTGgGT------------
R:         18   T010303031123123003111011121200133212011331..11212.    38        
--
>612_2892_1648_F3	ENSMUST00000113126	-	2064	2099	14	49	50	180	4x1x4x1x2x9x7x5x3	
G:       2099    ATGGATTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGG    2064      
                              ||||XX|||XX|X||||||||X||||||X||||X||
T:               -------------CTGAgaGCTccAaCCACAGCTtTTGTAAtCTGCcTG-
R:         14   T022302010303132123123203111011123220011301..33221.    49        
--
>614_3619_12_F3	ENSMUST00000113126	+	2649	2677	22	50	50	170	1x6x1x1x8x2x10	
G:       2649    CACCAGATGCCTCTGCAGACCTCACCATGGTCCCGCCTGTGGCAGCATCC    2677      
                                      |X|||||XXX|||||||X|X|||||||||
T:               ---------------------TcACCATggtCCCGCCTgTgGCAGCATCC
R:         22   T30020103031313231232031110130202003302212031231320    50        
--
>615_1586_1915_F3	ENSMUST00000113126	-	2434	2466	2	34	50	182	x4x7G1G14x2x3	
G:       2466    GAGCGTCTGGCTCCACAGCAGGCACCGGTAAGAGACCTCCCCCTGCACTC    2434      
                  X|||X|||||| | ||||||||||||||X|X||
T:               -aGCGtCTGGCTGCGCAGCAGGCACCGGTaAgAG----------------
R:          2   T33233022103213331231203110301001222002330202232233    34        
--
>615_3222_2277_F3	ENSMUST00000113126	-	2593	2614	17	38	50	180	2x9x11	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAG    2593      
                                 ||X||||||||X||||||||||
T:               ----------------GGtGTGGTGTCaGGGTGCTGGG------------
R:         17   T00133031111202232031110111222001132100030233231223    38        
--
>615_3965_4752_F3	ENSMUST00000113126	-	413	439	1	27	50	170	3x1x3x2x15x3	
G:        439    TCTTTGAGGGATTTTTTTTCAAACAGTACCACACCACACCTCTGTCTACA    413       
                 |||XX||X|X||||||||||||||X||
T:               TCTttGAgGgATTTTTTTTCAAACaGT-----------------------
R:          1   T02213121022300000002100122122313310101322222311223    27        
--
>615_4045_4540_F3	ENSMUST00000113126	-	2069	2098	15	44	50	180	3x1x4x12x3x4x3	
G:       2098    ATGGATTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAG    2069      
                               |||XX|||X|||||||||||X||X|||X||
T:               --------------TGAgaGCTcCAACCACAGCTtTTgTAAtCT------
R:         15   T02330201030313312312320010101112322000130022233312    44        
--
>618_869_5070_F3	ENSMUST00000113126	-	2595	2623	20	48	50	170	1x2x8x11x1x2x4	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAA    2595      
                                    |X|X|||||||X||||||||||XX|X|||
T:               -------------------CaGaGGTGTGGtGTGGTGTCAGggTgCTG--
R:         20   T102303321330203000333212011110211101112122312321..    48        
--
>618_2798_3439_F3	ENSMUST00000113126	-	2594	2619	21	46	50	180	x12x8x2x4	
G:       2619    AAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                     X|||||||||||X|||||||X|X|||
T:               --------------------gGTGTGGTGTGGtGTCAGGGtGcTGG----
R:         21   T221302010303130123133011110111100112120021021032..    46        
--
>619_443_1847_F3	ENSMUST00000113126	-	2068	2095	18	45	50	160	1x4x12x2x2x7	
G:       2095    ATGGATTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATCTGAGGAG    2068      
                                  |X|||X|||||||||||X|X|X||||||
T:               -----------------GaGCTcCAACCACAGCTtTtGtAATCTG-----
R:         18   T230200010303131123123230101011123210213303..222...    45        
--
>619_3111_2515_F3	ENSMUST00000113126	-	2600	2627	13	40	50	166	1x3x2T3x12x6	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                             |X||X| |||X|||||||||||X|||||
T:               ------------TaGAcATAGGtGTGGTGTGGTGtCAGGG----------
R:         13   T233010123231322231332031110111101122120030..210...    40        
--
>619_3323_2095_F3	ENSMUST00000113126	-	2599	2620	19	40	50	160	3x8x2x9	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X|||||||X|X||||||||
T:               ------------------AGGtGTGGTGTgGtGTCAGGGT----------
R:         19   T130201030313102312320311101112021121200133..300...    40        
--
>619_3356_3053_F3	ENSMUST00000113126	-	2603	2627	14	38	50	170	2x2x3x11x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X|X||X||||||||||X||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCA------------
R:         14   T020302010303133123123201111011120111213100..322...    38        
--
>619_3965_2936_F3	ENSMUST00000113126	-	720	750	5	35	50	170	x4x6x11x1x1x3x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                     X|||X|||||X||||||||||XXX||X||||
T:               ----cAATaTGCAGgCAGTAGGCACtgaCAtTGTC---------------
R:          5   T112201030313122312132031113111001122010121..333...    35        
--
>620_1043_4451_F3	ENSMUST00000113126	+	2739	2760	27	48	50	180	7x10x5	
G:       2739    TGTGTTTAGGACATTTTTTAAATCATTGTGTCTAAGCATCTCAGAGTCAA    2760      
                                           |||||||X|||||||||X||||
T:               --------------------------TGTGTCTaAGCATCTCAgAGTC--
R:         27   T02230201030313012313320213111112220231322213221221    48        
--
>620_2986_3924_F3	ENSMUST00000113126	+	939	964	18	43	50	180	1x3x1x5x16	
G:        939    TCCAAGTAGACAACACAAAGGTCACCATGAAGGAGATCTTGCTCAAGGCA    964       
                                  |X||XX||||X|||||||||||||||
T:               -----------------AaGGtcACCAtGAAGGAGATCTTGCT-------
R:         18   T13020103031313231232031110111202022232201321311122    43        
--
>621_1007_3070_F3	ENSMUST00000113126	+	785	822	5	42	50	212	3x2x2x6x4T2A2x15	
G:        785    TTCCGCCACTGGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAGTACT    822       
                     |||X|X|X|||||X||| || ||X||||||||||||||
T:               ----GCCaCtGgATTCCaATGTGCACAtTCATAAGTTTGGCT--------
R:          5   T220103031311230202031113111202133021001032.10310..    42        
--
>621_1106_2588_F3	ENSMUST00000113126	-	2073	2098	10	35	50	180	4x4x1x2x15	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                          ||||X|||XX|X||||||||||||||
T:               ---------TGAGaGCTccAaCCACAGCTTTTGTA---------------
R:         10   T311130312112232320311101112320001133120313.13330..    35        
--
>621_2384_2316_F3	ENSMUST00000113126	-	2596	2623	17	44	50	190	3x3x12x5x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 |||X||X|||||||||||X||||X||||
T:               ----------------CAGaGGtGTGGTGTGGTGtCAGGgTGCT------
R:         17   T330013133031033031232031110111101122120311.33310..    44        
--
>621_3538_1671_F3	ENSMUST00000113126	-	2596	2614	16	34	50	170	2x17	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTAAAAATCCCTCAAAGA    2596      
                                ||X||||||||||||||||
T:               ---------------GGtGTGGTGTCAGGGTGCT----------------
R:         16   T010303031123123203111011121200113203102331.20333..    34        
--
>622_197_3610_F3	ENSMUST00000113126	-	85	116	11	42	50	186	2x2x2x3x12x7T3	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATTTGAAATT    85        
                           ||X|X|X||X|||||||||||X|||||| |||
T:               ----------GTcAtCaCTgGTCACGTGTGAcTGTCGATTAT--------
R:         11   T233020103031311231230121131111222112323033312330.3    42        
--
>622_618_3958_F3	ENSMUST00000113126	-	2600	2622	21	43	50	170	5x1x4x13	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAA    2600      
                                     |||||XX|||X||||||||||||
T:               --------------------AGAGGtgTGGtGTGGTGTCAGGG-------
R:         21   T101110033330201030333222032110311101112120030333.3    43        
--
>622_1012_4163_F3	ENSMUST00000113126	+	487	515	16	44	50	190	x8x2x7x7x5	
G:        487    TGTCTGTACGCCTGGAGCAGTGCCCTCTGCAGCTGAATAACCCCTTTAAT    515       
                                X|||||||X|X||||||X||||||X||||
T:               ---------------aGCAGTGCcCtCTGCAGcTGAATAaCCCC------
R:         16   T211002010303133123121133002213121212033310001232.2    44        
--
>622_3113_3398_F3	ENSMUST00000113126	-	2587	2612	22	47	50	166	x9x8C5x3	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCTTTCA    2587      
                                      X||||||||X||||||| |||||X||
T:               ---------------------tGTGGTGTCaGGGTGCTCGGTACcTT---
R:         22   T200201030313102312330311101112020011322301312202.2    47        
--
>622_3280_4058_F3	ENSMUST00000113126	-	77	116	11	50	50	190	2x2x5x2x13x2x2x1x3x3x5	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGA    77        
                           ||X|X||||X|X||||||||||||X|X|XX||X||X||||
T:               ----------GTcAtCACTgGtCACGTGTGACTGtCgAatATgAGcTAGA
R:         11   T233020103031311211230221131111212122222233222223.2    50        
--
>623_657_1771_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x11x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:          9   T00133031111222232031110111232003123010110231220122    36        
--
>624_3505_229_F3	ENSMUST00000113126	-	2254	2278	2	26	50	170	1x5x3x6x10	
G:       2278    CAAGGCCTTAGAAGGCTACGCACGCAAGGTCGACACGGATTTTCCGCCAC    2254      
                  |X||||X||X|||||X|||||||||
T:               -AaGGCCtTAgAAGGCtACGCACGCA------------------------
R:          2   T0312030303020203031331133132031110111202323332221.    26        
--
>624_4258_363_F3	ENSMUST00000113126	-	2589	2614	20	45	50	180	2x9x8x4x3	
G:       2614    TAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCCCTCA    2589      
                                    ||X||||||||X|||||||X|||X||
T:               -------------------GGtGTGGTGTCaGGGTGCTgGGTaCC-----
R:         20   T1122010303131023123203111011123200113220012101111.    45        
--
>625_2046_1219_F3	ENSMUST00000113126	-	2064	2099	9	44	50	172	1x3x5x1x2x9x8G2G3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGGATCTT    2064      
                         |X||X||||XX|X||||||||X||||||| || |||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAATGTGGCTG------
R:          9   T00133031111202232031110111232200113031110321201202    44        
--
>626_1432_3126_F3	ENSMUST00000113126	-	2073	2099	9	35	50	170	1x3x5x1x2x15	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                         |X||X||||XX|X||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTA---------------
R:          9   T001330311112022320311101112320001131002302...2211.    35        
--
>626_2104_3741_F3	ENSMUST00000113126	-	772	792	6	26	50	170	6x10x5	
G:        792    TGCATCCAGTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    772       
                      ||||||X|||||||||X||||
T:               -----CCAGTGgCGGAAAATCcGTGT------------------------
R:          6   T200330012112330200032331110333003133010012...0133.    26        
--
>626_2489_853_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T301020103030210211232031110111101112203203...2022.    36        
--
>626_3408_3516_F3	ENSMUST00000113126	-	729	754	1	26	50	180	2x2x4x6x12	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGCGCCTGTGATCTGAGAGACAGGT    729       
                 ||X|X|||X|||||X|||||||||||
T:               TCaGcAATaTGCAGgCAGTAGGCACT------------------------
R:          1   T020201030313122312132031122113201322122232...1122.    26        
--
>626_3936_793_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	8x10x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||||||||X|||||||||X|||
T:               --------------GACAGAGGtGTGGTGTGGtGTC--------------
R:         15   T233020103033311211222031110111102112332233...3022.    36        
--
>627_1384_3938_F3	ENSMUST00000113126	-	2591	2615	19	43	50	170	1x2x9x2x11	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2591      
                                   |X|X||||||||X|X||||||||||
T:               ------------------TgGtGTGGTGTCaGgGTGCTGGGTA-------
R:         19   T1212010303131323123203111011120230113210013.301...    43        
--
>627_3021_1088_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T0013303111120223203111011123230011300131100.002...    36        
--
>629_952_3692_F3	ENSMUST00000113126	-	723	753	2	32	50	170	x3x4x5x1x11x2x5	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    723       
                  X||X|||X||||XX||||||||||X|X||||
T:               -cAGcAATaTGCAggCAGTAGGCACtGaCATT------------------
R:          2   T301201030313132312132031131111302203122020..0000..    32        
--
>629_1845_3152_F3	ENSMUST00000113126	-	2224	2246	12	34	50	170	1x12x5x5	
G:       2246    GGGGAGGTCGAACGCACGCACGCACCCACGCATGCCAATGAGCCCATTCA    2224      
                            |X|||||||||||X||||X||||
T:               -----------AcGCACGCACGCAcCCACgCATG----------------
R:         12   T321200212000033113311331200110313112312122..0331..    34        
--
>629_2098_3030_F3	ENSMUST00000113126	-	2599	2620	19	40	50	180	3x8x11	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X|||||||X||||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGT----------
R:         19   T130201030313102312320311101112011121200103..2001..    40        
--
>630_1576_4051_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T233020103003310211232031110111101112232033..2211..    36        
--
>631_3788_3458_F3	ENSMUST00000113126	-	285	324	9	48	50	172	2x2x3C3x1x2x2x2G7x10x4	
G:        324    GGCCACAGGTCGTTCTAATCTTTGAGCTGTGTTTGAGCGTCTTCTAATTC    285       
                         ||X|X|| |||XX|X|X| |||||||X|||||||||X|||
T:               --------GTcGtTCCAATctTtGaGGTGTGTTTgAGCGTCTTCtAAT--
R:          9   T230303110113302010303031120111110002233122023303.2    48        
--
>632_215_1087_F3	ENSMUST00000113126	-	91	116	11	36	50	180	2x2x5x2x15	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATT    91        
                           ||X|X||||X|X||||||||||||||
T:               ----------GTcAtCACTgGtCACGTGTGACTGTC--------------
R:         11   T233020103031311211230221131111212112222031..2212..    36        
--
>632_273_3529_F3	ENSMUST00000113126	-	2072	2100	8	36	50	170	2x4x4x1x2x11x5	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                        ||X|||X|||XX|X||||||||||X||||
T:               -------TCtGAGaGCTccAaCCACAGCTTTtGTAA--------------
R:          8   T221333312112232320311101112320031130210233..2212..    36        
--
>632_2367_2432_F3	ENSMUST00000113126	-	2072	2099	9	36	50	200	1x8x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T001330311112222320311101112320001130121200..3123..    36        
--
>632_2803_2469_F3	ENSMUST00000113126	-	2600	2623	18	41	50	200	6x8x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  ||||||X|||||||X|||||||||
T:               -----------------CAGAGGtGTGGTGTgGTGTCAGGG---------
R:         18   T313302010303131123122203111011120111212000..2222..    41        
--
>633_53_3191_F3	ENSMUST00000113126	+	1834	1858	18	42	50	190	2x2x18x3	
G:       1834    AGGGGCTGAGTGCTGCTCAGCCGTGTGTCCTGCCTGGCAGTCCCAGCAAG    1858      
                                  ||X|X|||||||||||||||||X||
T:               -----------------CAgCcGTGTGTCCTGCCTGGCAgTC--------
R:         18   T132210310131123123103131111120213021031312..2132..    42        
--
>633_1623_4149_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x8x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X|||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGCtTTTGTAAT-------------
R:          9   T001330311112222320311101112300001130301303..2112..    37        
--
>633_1786_1801_F3	ENSMUST00000113126	-	2073	2094	13	34	50	160	4x1x12x5	
G:       2094    TCTCCCTTATCCAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTTG    2073      
                             ||||XX|||||||||||X||||
T:               ------------AGCTccAACCACAGCTTtTGTA----------------
R:         13   T010303131123123203101011123201011331033030..3113..    34        
--
>633_2062_3630_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T001330311112222320311101112220001130000202..3222..    36        
--
>633_2459_3491_F3	ENSMUST00000113126	-	720	751	4	35	50	180	3x2x6x10x3x2x3x3	
G:        751    CCTGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                    |||X|X|||||X|||||||||X||X|X||X||
T:               ---GCAaTaTGCAGgCAGTAGGCAcTGaCaTTgTC---------------
R:          4   T323331230313122312132031321112300120020102..3103..    35        
--
>634_137_3278_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x14x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X|||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaAT-------------
R:          9   T001330311112322320311101112320001110300301..222...    37        
--
>634_1168_1041_F3	ENSMUST00000113126	-	759	776	25	42	50	180	18	
G:        776    AAGTGCATGCGTGGGTGCGTGCGTCGTGTCGACCTCCCCATCGTAGCCTT    759       
                                         ||||||||||||||||||
T:               ------------------------CGTGTCGACCTCCCCATC--------
R:         25   T121221030313112312112130131112321022000132..312...    42        
--
>634_1607_2671_F3	ENSMUST00000113126	-	2594	2617	23	46	50	200	19x5	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                       |||||||||||||||||||X||||
T:               ----------------------TGTGGTGTGGTGTCAGGGTgCTGG----
R:         23   T233320103032033321131031110111101112120013..303...    46        
--
>634_1623_434_F3	ENSMUST00000113126	+	2607	2627	20	40	50	150	1x2x12x6	
G:       2607    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2627      
                                    |X|X|||||||||||X|||||
T:               -------------------AcCaCACCACACCTCtGTCTA----------
R:         20   T131020103031333231232031110111102211122330..333...    40        
--
>634_2248_1264_F3	ENSMUST00000113126	-	2604	2631	9	36	50	166	2x1x3T4x3x14	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                         ||XX|| ||||X||X|||||||||||||
T:               --------GGtgTATACAGaGGtGTGGTGTGGTGTC--------------
R:          9   T203020103002133311232031110111101112003110..223...    36        
--
>634_2334_1230_F3	ENSMUST00000113126	-	2600	2623	17	40	50	160	3x3x10x2x6	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||X|X|||||
T:               ----------------CAGaGGtGTGGTGTGGtGtCAGGG----------
R:         17   T323200103031311231232031110111103132120022..000...    40        
--
>635_1531_4268_F3	ENSMUST00000113126	-	2599	2629	11	41	50	190	x4x2x3x3x16x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                           X|||X|X||X||X|||||||||||||||X||
T:               ----------tGTAgAcAGaGGtGTGGTGTGGTGTCAGgGT---------
R:         11   T233120130331130231232031110111101112122010..223...    41        
--
>635_2967_4781_F3	ENSMUST00000113126	-	2601	2625	16	40	50	170	2x3x11x5x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                ||X||X||||||||||X||||X|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTcAGG----------
R:         16   T023302010303133123123201111011120111012031..220...    40        
--
>636_2691_2757_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x10x7	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||X||||||
T:               ----------------CAGaGGtGTGGTGTGGtGTCAGG-----------
R:         17   T233020103031333231232031110111102112120333..22121.    39        
--
>637_1356_3573_F3	ENSMUST00000113126	+	2596	2615	14	33	50	160	4x5x11	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                              ||||X||||X||||||||||
T:               -------------AGCAcCCTGaCACCACACCA-----------------
R:         14   T20013101031313231200213111011110132232.302..1202..    33        
--
>641_424_4815_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223203111011123200013222033132.1011..    33        
--
>641_2877_558_F3	ENSMUST00000113126	+	1243	1264	21	42	50	160	7x2x10x3	
G:       1243    CAGACTGCGATTCACGACGGATGTGCAGTTAGGTATCTCTGGAGACAAAG    1264      
                                     |||||||X|X|||||||||X||
T:               --------------------ATGTGCAgTtAGGTATCTCtGG--------
R:         21   T2002010303131323123303111311123201332223101.2000..    42        
--
>642_72_371_F3	ENSMUST00000113126	-	719	750	5	36	50	166	x4x6x10x1G1x2x7	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|||X|||||X|||||||||X |X|X||||||
T:               ----cAATaTGCAGgCAGTAGGCAcGGaCaTTGTCA--------------
R:          5   T1122010303131223121320313301133011210200310031010.    36        
--
>642_1601_4052_F3	ENSMUST00000113126	-	729	753	2	26	50	170	3x2x2x6x12	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGCGCCTGTGATCTGAGAGACAGGT    729       
                  |||X|X|X|||||X|||||||||||
T:               -CAGcAaTaTGCAGgCAGTAGGCACT------------------------
R:          2   T2012111303131223121320311201122021311312221332022.    26        
--
>642_2095_4931_F3	ENSMUST00000113126	-	2599	2623	18	42	50	170	3x3x8x8x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |||X||X|||||||X|||||||X||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGgGT--------
R:         18   T3133020103031311231232031110111201112122012302331.    42        
--
>642_3670_777_F3	ENSMUST00000113126	+	2605	2627	22	44	50	170	x13x7x3	
G:       2605    GGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAG    2627      
                                      X||||||||||||X||||||X||
T:               ---------------------aCACCACACCACAcCTCTGTcTA------
R:         22   T3012010303231323123003111011110111202221132332030.    44        
--
>643_3135_1379_F3	ENSMUST00000113126	-	2066	2099	9	42	50	166	1x3x5x1x2x14x2x1G4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCGAGATCTT    2066      
                         |X||X||||XX|X|||||||||||||X|X ||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaAtGTGCC--------
R:          9   T001330311112322320311101112320001120011130022121..    42        
--
>644_321_344_F3	ENSMUST00000113126	-	2068	2098	10	40	50	196	8x1x2x7x9A3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                          ||||||||XX|X||||||X|||||||| |||
T:               ---------TGAGAGCTccAaCCACAGcTTTTGTAAACTG----------
R:         10   T0010303111122223203111011120200011300121100.332.1.    40        
--
>644_954_3181_F3	ENSMUST00000113126	+	2589	2621	7	39	50	176	2x1x2x3x4x1x2T17	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                       ||XX|X||X|||XX| |||||||||||||||||
T:               ------GGtaCcCAgCACccTTACACCACACCACACCTC-----------
R:          7   T2330201030120133112320311101111011110223213.133.1.    39        
--
>644_1768_2936_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T0013303111122223203111011123200031302113100.310.3.    36        
--
>644_2547_2121_F3	ENSMUST00000113126	-	2597	2623	17	43	50	170	x3x3x14x3x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                 X||X||X|||||||||||||X||X|||
T:               ----------------cAGaGGtGTGGTGTGGTGTCaGGgTGC-------
R:         17   T2330201030000301012320311101111011120202113.022.1.    43        
--
>645_881_1461_F3	ENSMUST00000113126	-	2071	2098	10	37	50	180	3x5x1x2x7x10	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                          |||X||||XX|X||||||X|||||||||
T:               ---------TGAgAGCTccAaCCACAGcTTTTGTAAT-------------
R:         10   T001030311112322320311101112020001130303313..33022.    37        
--
>646_1162_2472_F3	ENSMUST00000113126	+	2046	2070	1	25	50	150	1x3x5x3x2x11	
G:       2046    ATCTGTTCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTC    2070      
                 |X||X||||X||X|X||||||||||
T:               AtCTgTTCCcATaTtGAACAGGCAG-------------------------
R:          1   T3022010203131331201120312331133031032331322.103...    25        
--
>646_1919_72_F3	ENSMUST00000113126	-	2071	2098	8	35	50	166	x4x4x2C10x7	
G:       2098    CTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTTGC    2071      
                        X|||X|||X| ||||||||||X||||||
T:               -------tGAGaGCTcCCACCACAGCTTtTGTAAT---------------
R:          8   T1033313112212320001101112320301130330021103.303...    35        
--
>646_3527_1017_F3	ENSMUST00000113126	-	287	308	24	45	50	170	x18x4	
G:        308    GCCACAGCCGATATCTTATACGAAGCTGTGTTTGAGCGTCTTCTAAATCA    287       
                                        X|||||||||||||||||X|||
T:               -----------------------aGCTGTGTTTGAGCGTCTtCTA-----
R:         24   T0203330133130000030310312321111001223312222.332...    45        
--
>647_1841_4868_F3	ENSMUST00000113126	-	2591	2614	22	45	50	180	13x6x5	
G:       2614    TCTAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCT    2591      
                                      |||||||||||||X|||||X||||
T:               ---------------------GGTGTGGTGTCAGgGTGCTgGGTA-----
R:         22   T023132010303131123123201111011121220113200..0023..    45        
--
>647_1939_3926_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T001330311112222320311101112120001130002103..0323..    36        
--
>648_517_1037_F3	ENSMUST00000113126	-	2061	2099	9	47	50	220	1x8x1x2x14x2x4x1x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X|||||||XX|X|||||||||||||X|X|||XX|||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGTaAtCTGccTGTTC---
R:          9   T0013303111122223203111011123200011100221112.102...    47        
--
>648_1339_4926_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	x8x1x2x12x4	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          X|||||||XX|X|||||||||||X|||
T:               ---------tGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:         10   T0013323111122223203111011123200031300112022.320...    36        
--
>649_1160_4202_F3	ENSMUST00000113126	-	730	750	5	25	50	170	4x6x11	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||X|||||X||||||||||
T:               ----CAATaTGCAGgCAGTAGGCAC-------------------------
R:          5   T01120103031312231213203111002300012211.2100.021.1.    25        
--
>649_3180_1121_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000102010.3333.202.1.    33        
--
>649_3365_1670_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111232232031110111232003113010.2023.300.3.    36        
--
>650_1156_2685_F3	ENSMUST00000113126	-	2602	2622	18	38	50	170	1x16x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  |X|||||||||||||||X|||
T:               -----------------AgAGGTGTGGTGTGGTGtCAG------------
R:         18   T023102010303132123122011110111101132123032220301.3    38        
--
>650_1343_4630_F3	ENSMUST00000113126	-	2069	2099	9	39	50	190	1x3x5x1x2x8x11	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X|||||||X||||||||||
T:               --------CtGAgAGCTccAaCCACAGCtTTTGTAATCT-----------
R:          9   T001330311112022320311101112330001130322002213333.0    39        
--
>650_4221_2966_F3	ENSMUST00000113126	+	1493	1527	13	47	50	190	7x4x2x1x3x2x5x2x9	
G:       1493    CGTGCTCAAGGTTAACTACATCCTGGAATCACGAGCGAGCACTGCCCGAG    1527      
                             |||||||X|||X|XX||X|X||||X|X||||||||
T:               ------------TAACTACaTCCtGgaATcAcGAGCgAgCACTGCCC---
R:         13   T023302010303130123123203111031123223223311213002.3    47        
--
>651_2152_4794_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111232232031110111232003113001123221321..2    36        
--
>651_2746_3679_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111202232031110111232003113012010233222..2    36        
--
>651_3599_2960_F3	ENSMUST00000113126	+	1907	1951	3	47	50	176	2x1x9x1x3x1x2x1x1x4x1T9x2x7	
G:       1907    ATCAAATTTCTTAAAGCAAACAAAGAACAAAAGTGTACATTTCTCTTTCT    1951      
                   ||XX||||||||XX||XX|XXX|||X |||||||||X|X||||||
T:               --CAaaTTTCTTAAagCAaaCaaaGAAcTAAAGTGTACaTtTCTCTT---
R:          3   T20011230022030303113103122002300211131031022220..3    47        
--
>652_706_4967_F3	ENSMUST00000113126	-	2585	2614	17	46	50	180	2x17x1x1x4x5	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTTGCAAAG    2585      
                                 ||X||||||||||||||||XXX|||X||||
T:               ----------------GGtGTGGTGTCAGGGTGCTgggTACcTTGC----
R:         17   T302130312112032320311101112120011320211313..2312.0    46        
--
>652_2786_1804_F3	ENSMUST00000113126	-	2068	2098	10	40	50	176	3x5x1x2x9x7A3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                          |||X||||XX|X||||||||X|||||| |||
T:               ---------TGAgAGCTccAaCCACAGCTtTTGTAAACTG----------
R:         10   T001030311112322320311101112323001130012111..3232.0    40        
--
>653_151_3179_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x9x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||X|||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAAT-------------
R:          9   T001330311112322320311101112322001130312302..31223.    37        
--
>653_1445_4987_F3	ENSMUST00000113126	-	2599	2625	16	42	50	170	2x3x3x8x8x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||X|||||||X|||||||X||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGT--------
R:         16   T023302010303133123123202111011120111212201..02202.    42        
--
>653_1489_3680_F3	ENSMUST00000113126	-	2603	2627	14	38	50	170	2x2x3x11x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X|X||X||||||||||X||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCA------------
R:         14   T310302010303133123123201111011120111213233..22033.    38        
--
>653_2332_3172_F3	ENSMUST00000113126	-	2059	2099	9	49	50	176	1x3x5x1x2x14x2x1T2x1x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2059      
                         |X||X||||XX|X|||||||||||||X|X ||XX|||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaAtTTGccTGTTCAA-
R:          9   T001330311112322320311101112320001120200102..30210.    49        
--
>653_2993_143_F3	ENSMUST00000113126	-	2594	2613	23	42	50	160	12x2x6	
G:       2613    TCTAAACAATCAGCCCAGGAGTGTGTGGTGTCAGGGTGCTGGAAATCCCT    2594      
                                       ||||||||||||X|X|||||
T:               ----------------------GTGTGGTGTCAGgGtGCTGG--------
R:         23   T133302010303231123123111111011121230313210..12011.    42        
--
>654_558_1447_F3	ENSMUST00000113126	-	709	750	5	46	50	182	x4x8x8x2x1x2T4x2A9	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCGAGGT    709       
                     X|||X|||||||X|||||||X|XX| ||||X| |||||||||
T:               ----cAATaTGCAGGCaGTAGGCAcTgaCTTTGTcAATGAGCTTCG----
R:          5   T12210103031312032213203102331200113103.223..3313..    46        
--
>654_1717_4698_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111222232031110111232000133001.331..0030..    36        
--
>654_3802_1230_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x14x4x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X|||||||||||||X|||X||
T:               ---------------GAcAGAGGTGTGGTGTgGTGtCA------------
R:         16   T02330201030313312312220111101112011021.220..2031..    38        
--
>654_4239_153_F3	ENSMUST00000113126	-	2592	2623	16	47	50	170	3x14x3x2x1x4x5	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2592      
                                |||X|||||||||||||X||X|XX|||X||||
T:               ---------------CAGaGGTGTGGTGTGGTgTCaGggTGCtGGGT---
R:         16   T01220103231010331232011110111101312021.113..3012..    47        
--
>654_4258_358_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111222232031110111232000133001.302..3122..    36        
--
>655_89_3836_F3	ENSMUST00000113126	-	2592	2612	25	45	50	170	x21	
G:       2612    TTCTAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCC    2592      
                                         X||||||||||||||||||||
T:               ------------------------tGTGGTGTCAGGGTGCTGGGT-----
R:         25   T002330221030333112312300311101112120011321..12012.    45        
--
>655_2301_2188_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x8x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||X|||||||
T:               --------CtGAGAGCTccAaCCACAGCtTTTGTAA--------------
R:          9   T010330311112222320311101112300001130103301..20122.    36        
--
>655_3397_1267_F3	ENSMUST00000113126	-	2071	2095	13	37	50	170	5x1x2x14x3	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                             |||||XX|X|||||||||||||X||
T:               ------------GAGCTccAaCCACAGCTTTTGTaAT-------------
R:         13   T001230311112022320311101112320001110312202..31232.    37        
--
>656_1153_817_F3	ENSMUST00000113126	-	2602	2622	22	42	50	170	4x6x11	
G:       2622    AAAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAA    2602      
                                      ||||X|||||X||||||||||
T:               ---------------------AGAGgTGTGGtGTGGTGTCAG--------
R:         22   T230330220133020100030322231111031110111212..3301..    42        
--
>656_1364_3458_F3	ENSMUST00000113126	-	2071	2095	13	37	50	170	5x1x2x12x5	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                             |||||XX|X|||||||||||X||||
T:               ------------GAGCTccAaCCACAGCTTTTgTAAT-------------
R:         13   T001330311112122320311101112320003130303113..3322..    37        
--
>656_1880_3006_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T233000103023013231232031110111101112023030..1300..    36        
--
>656_2045_1963_F3	ENSMUST00000113126	-	2603	2624	16	37	50	160	1x3x3x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                |X||X||X||||||||||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCA-------------
R:         16   T233020103013310131232031110111101112102212..1202..    37        
--
>656_3311_1137_F3	ENSMUST00000113126	+	2605	2623	23	41	50	150	12x4x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       ||||||||||||X|||X||
T:               ----------------------ACACCACACCACaCCTcTG---------
R:         23   T233020103001013211232031110111101131023213..0233..    41        
--
>656_3524_2300_F3	ENSMUST00000113126	-	2605	2625	15	35	50	150	x5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               X||||X||X||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGT---------------
R:         15   T233020103031333211232031110111101113313322..3300..    35        
--
>656_3599_1424_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	2x3x13x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X||X||||||||||||X|||||
T:               ---------------GAcAGaGGTGTGGTGTGGtGTCAG-----------
R:         16   T023302010303133123123201111011110211212200..2030..    39        
--
>657_703_1809_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T001330311112222320311101112020001130102302...33320    36        
--
>657_1296_3989_F3	ENSMUST00000113126	+	2067	2093	16	42	50	170	5x12x1x3x1x5	
G:       2067    TCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAA    2093      
                                |||||X|||||||||||XX||XX||||
T:               ---------------GCAGAtTACAAAAGCTGtgGTtgGAGC--------
R:         16   T010000103313111231221031100023212301120223...23120    42        
--
>657_1502_4504_F3	ENSMUST00000113126	+	2597	2620	15	38	50	166	5x2T12x4	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                               |||||X| ||||||||||||X|||
T:               --------------GCACCcTTACACCACACCACaCCT------------
R:         15   T233020103003033311032031110111101131020131...23022    38        
--
>657_1717_2747_F3	ENSMUST00000113126	-	2605	2624	16	35	50	160	4x3x13	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                                ||||X||X||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGT---------------
R:         16   T203020103030001011232031110111101113323221...22010    35        
--
>657_3412_302_F3	ENSMUST00000113126	-	2072	2098	10	36	50	190	3x5x1x2x16	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X|||||||||||||||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:         10   T221130310112022320311101112320001130130011...02211    36        
--
>657_4091_2610_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x9x7	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X||||||||X||||||
T:               ------------GAGCTccAaCCACAGCTtTTGTAA--------------
R:         13   T001130311112322320311101112322001130210001...12012    36        
--
>658_670_3247_F3	ENSMUST00000113126	-	2595	2625	15	45	50	190	5x3x12x2x2x7	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               |||||X||X|||||||||||X|X|X||||||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGgGTGCTG-----
R:         15   T233021003303333211232031110111101122022011..2323..    45        
--
>658_914_1246_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x15x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X||||||||||||||X||
T:               -------------------AGGtGTGGTGTGGTGTCAgGG----------
R:         20   T233020100030010001232031110111101112130033..2323..    40        
--
>658_1577_1422_F3	ENSMUST00000113126	+	2593	2620	11	38	50	192	4x4G2T16	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                           ||||X||| || ||||||||||||||||
T:               ----------CCCAgCACGCTTACACCACACCACACCT------------
R:         11   T013020103000010311332031110111101111023301..0032..    38        
--
>658_2218_2666_F3	ENSMUST00000113126	-	2598	2627	13	42	50	160	2x2x3x2x1x2x14x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                             ||X|X||X|XX|X|||||||||||||X|||
T:               ------------TAgAcAGaGgtGtGGTGTGGTGTCAGgGTG--------
R:         13   T233200103031033231232131310111101112123011..3032..    42        
--
>658_2269_1693_F3	ENSMUST00000113126	-	2595	2625	15	45	50	170	x5x3x8x8x2x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               X||||X||X|||||||X|||||||X|X||||
T:               --------------gACAGaGGtGTGGTGTgGTGTCAGgGtGCTG-----
R:         15   T323020103031311211232031110111201112123031..2323..    45        
--
>658_2345_2917_F3	ENSMUST00000113126	+	2594	2621	12	39	50	166	2x1x4G3x13x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            ||XX||| |||X||||||||||||X|||
T:               -----------CCagCACGCTGaCACCACACCACAcCTC-----------
R:         12   T013003201123023311332131110111101110022330..2212..    39        
--
>658_2352_3155_F3	ENSMUST00000113126	-	2594	2623	18	47	50	180	x14x4x2x4x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                  X|||||||||||||X|||X|X|||X|||||
T:               -----------------cAGAGGTGTGGTGTgGTGtCaGGGtGCTGG---
R:         18   T023302010303132123122201111011120110202003..2103..    47        
--
>658_2379_4110_F3	ENSMUST00000113126	-	2601	2625	15	39	50	190	1x4x3x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |X|||X||X||||||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCAGG-----------
R:         15   T233020103110030311232031110111101112120302..1302..    39        
--
>658_2861_2053_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T233020103000003311232031110111101112023232..3020..    36        
--
>658_3058_90_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T233020103000013211232031110111101112232001..0222..    36        
--
>658_3164_70_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	4x1x3x14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               ||||XX||X|||||||||||||X||
T:               --------------GACAgaGGtGTGGTGTGGTGTCaGG-----------
R:         15   T233022103003310211032031110111101112020231..2300..    39        
--
>658_3932_357_F3	ENSMUST00000113126	-	2590	2612	18	40	50	170	10x6x3x4	
G:       2612    CAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCCCTCAAAGA    2590      
                                  ||||||||||X|||||X||X|||
T:               -----------------TGTGGTGTCAgGGTGCtGGgTAC----------
R:         18   T230303031123123003111011121100113110113113..0301..    40        
--
>659_596_3803_F3	ENSMUST00000113126	+	2594	2621	12	39	50	166	x7x1x2T7x10	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            X||||||XX| |||||||X|||||||||
T:               -----------cCAGCACccTTACACCACaCCACACCTC-----------
R:         12   T233020103023012311132031110110101111022303..23210.    39        
--
>659_610_2974_F3	ENSMUST00000113126	-	2605	2628	12	35	50	166	3x1T6x13	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                            |||X ||||||X||||||||||||
T:               -----------GTAgTCAGAGGtGTGGTGTGGTGT---------------
R:         12   T023302010303133121222031110111101111233321..12210.    35        
--
>659_1484_2422_F3	ENSMUST00000113126	-	2602	2629	12	39	50	180	2x2x2x14x1x7	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X|X|||||||||||||XX||||||
T:               -----------TGtAgAcAGAGGTGTGGTGTggTGTCAG-----------
R:         12   T022302010303133123122201111011121111212221..32321.    39        
--
>659_1913_3550_F3	ENSMUST00000113126	-	2600	2626	13	39	50	176	6x2x8A4x6	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                             ||||||X|X||||||| ||||X|||||
T:               ------------AGACAGaGgTGTGGTGAGGTGtCAGGG-----------
R:         13   T132011030313122112321111101122011321200003..03021.    39        
--
>660_1934_2079_F3	ENSMUST00000113126	-	1426	1449	17	40	50	180	2x4x4x14	
G:       1449    AGAAAACTGAACAGGCAGTACAGGTGCTTGTAGTCATGGCAGAAGAAATC    1426      
                                 ||X|||X|||X|||||||||||||
T:               ----------------AGtACAgGTGcTTGTAGTCATGGC----------
R:         17   T310103031311131232031110111201132121310333..3130..    40        
--
>660_2106_1348_F3	ENSMUST00000113126	+	2595	2620	13	38	50	166	5x2x2T8x8	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                             |||||X|X| ||||||||X|||||||
T:               ------------CAGCAcCcTTACACCACAcCACACCT------------
R:         13   T301201030313112312022031110111301111023100..0121..    38        
--
>661_100_1363_F3	ENSMUST00000113126	-	730	753	2	25	50	160	1x2x4x6x11	
G:        753    CCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                  |X|X|||X|||||X||||||||||
T:               -CaGcAATaTGCAGgCAGTAGGCAC-------------------------
R:          2   T130201030313122312132031113133201321223131...0010.    25        
--
>661_552_2991_F3	ENSMUST00000113126	-	2600	2617	23	40	50	160	15x3	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                       |||||||||||||||X||
T:               ----------------------TGTGGTGTGGTGTCAgGG----------
R:         23   T202010103110123121332031110111101112130030...0000.    40        
--
>661_1006_771_F3	ENSMUST00000113126	-	2601	2625	16	40	50	170	2x3x11x5x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                ||X||X||||||||||X||||X|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTcAGG----------
R:         16   T022302010303133023123201111011120111012032...0023.    40        
--
>661_1285_3984_F3	ENSMUST00000113126	-	2061	2099	9	47	50	166	1x3x5x1x2x14x2x2x1C7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X||X||||XX|X|||||||||||||X|X|X |||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaAtCtCCCTGTTC---
R:          9   T001330311112322320311101112320001110021200...0203.    47        
--
>661_1462_4958_F3	ENSMUST00000113126	-	1501	1527	12	38	50	170	2x8x2x9x1x5	
G:       1527    CGTGCTCAAGGGGGCAGTGCTCGCTCGTGATTCCAGGAGCACTGCCCGAG    1501      
                            ||X|||||||X|X||||||||XX||||
T:               -----------GGgCAGTGCTcGcTCGTGATTccAGGA------------
R:         12   T202012302131023121132031223112301112021233...3223.    38        
--
>661_1550_1939_F3	ENSMUST00000113126	-	2601	2619	19	37	50	170	2x17	
G:       2619    ATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGTGAAAAAAAATCC    2601      
                                   ||X||||||||||||||||
T:               ------------------GGtGTGGTGTGGTGTCAGG-------------
R:         19   T302210320131123123103111011110111212033312...1023.    37        
--
>661_1776_4477_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T001330311112322320311101112320001330313300...0212.    37        
--
>661_1819_3025_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320311101112320001223122201...1330.    33        
--
>661_2565_2163_F3	ENSMUST00000113126	+	1422	1444	13	35	50	176	7x9G6	
G:       1422    CTCACGTATCTAAGCAGCCATGACTACAAGCACCTGTACTTCGAGTCCGA    1444      
                             |||||||X|||||||| ||||||
T:               ------------AGCAGCCaTGACTACAGGCACCT---------------
R:         13   T220210300121123123003121231120311023012132...2232.    35        
--
>661_3145_5021_F3	ENSMUST00000113126	-	2592	2614	17	39	50	170	2x11x6x4	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2592      
                                 ||X||||||||||X|||||X|||
T:               ----------------GGtGTGGTGTCAGgGTGCTgGGT-----------
R:         17   T001333311112223320311101112123011323001200...2222.    39        
--
>661_4090_4206_F3	ENSMUST00000113126	-	2064	2089	24	49	50	170	2x9x8x7	
G:       2089    ATGGATTCTCCCTTATCCAAGTACAACCACAGCTTTTGTAATCTGCCTGG    2064      
                                        ||X||||||||X|||||||X||||||
T:               -----------------------CAaCCACAGCTtTTGTAATcTGCCTG-
R:         24   T023302010303133023323203111011123210011303...0021.    49        
--
>663_1488_549_F3	ENSMUST00000113126	-	719	750	5	36	50	180	x4x6x10x1x2x2x7	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|||X|||||X|||||||||XX|X|X||||||
T:               ----cAATaTGCAGgCAGTAGGCActGaCaTTGTCA--------------
R:          5   T11220103031312231213203131111230112101.103..0212..    36        
--
>663_1904_3020_F3	ENSMUST00000113126	-	2071	2098	10	37	50	160	3x5x1x2x9x2x6	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                          |||X||||XX|X||||||||X|X|||||
T:               ---------TGAgAGCTccAaCCACAGCTtTtGTAAT-------------
R:         10   T00103031111202232031110111232101113031.231..3012..    37        
--
>663_2015_3381_F3	ENSMUST00000113126	+	2602	2629	20	47	50	170	x3x18x2x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                    X||X|||||||||||||||||X|X||||
T:               -------------------cTGaCACCACACCACACCTCTgTcTACA---
R:         20   T23302010303003002123213111011110111102.301..3113..    47        
--
>663_2352_3646_F3	ENSMUST00000113126	+	2594	2622	12	40	50	200	7x4x12x1x5	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||||||X|||X|||||||||||XX||||
T:               -----------CCAGCACcCTGaCACCACACCACacCTCT----------
R:         12   T23302010303301231120213111011110113202.233..0130..    40        
--
>663_3081_4094_F3	ENSMUST00000113126	+	2597	2616	15	34	50	160	4x4x12	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                               ||||X|||X|||||||||||
T:               --------------GCACcCTGaCACCACACCAC----------------
R:         15   T23302010303102331120213111011110112203.333..1211..    34        
--
>663_3160_2442_F3	ENSMUST00000113126	+	2586	2622	4	40	50	172	1x5x4C1x2x1G3x13x5	
G:       2586    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                    |X||||X||| |X|X |||X||||||||||||X||||
T:               ---CaAGGTaCCCCGcAcGCTGaCACCACACCACAcCTCT----------
R:          4   T33203020101000311233213111011110111302.320..1322..    40        
--
>663_4066_1795_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23102013300301322123203111011110111202.013..3321..    36        
--
>663_4204_1096_F3	ENSMUST00000113126	-	2063	2099	9	45	50	186	1x3x5x1x2x16C3x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTATCTT    2063      
                         |X||X||||XX|X||||||||||||||| |||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAACCTGcCTGT-----
R:          9   T00133031111232232031110111232000113010.300..1110..    45        
--
>664_661_833_F3	ENSMUST00000113126	-	2603	2631	9	37	50	196	4x2x5x2A15	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                         ||||X|X||||X| |||||||||||||||
T:               --------GGTGtAgACAGaGATGTGGTGTGGTGTCA-------------
R:          9   T233020203011031211232231110111101112132000..3233..    37        
--
>664_898_1787_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	13x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||||X||||
T:               ----------------------ACACCACACCACAcCTCT----------
R:         23   T103322103000030201232031110111101110022222..2233..    40        
--
>664_1027_1699_F3	ENSMUST00000113126	-	2600	2625	14	39	50	160	2x3x3x8x2x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                              ||X||X||X|||||||X|X|||||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGG-----------
R:         14   T130201030313132312320311101112021121200211..3321..    39        
--
>664_1181_2437_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	3x5x1x2x9x7	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X||||||||X||||||
T:               ---------TGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:         10   T001030311112322320311101112323001130002233..3321..    36        
--
>664_1314_2578_F3	ENSMUST00000113126	-	80	110	16	46	50	170	3x2x2x11x2x6x5	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    80        
                                |||X|X|X||||||||||X|X|||||X||||
T:               ---------------ACTgGtCaCGTGTGACTGtCgAATATgAGCT----
R:         16   T233020130313102312303231311112121220203333..2223..    46        
--
>664_1674_4467_F3	ENSMUST00000113126	+	2605	2623	23	41	50	190	19	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCTG---------
R:         23   T231322103203030311132031110111101111022210..2222..    41        
--
>664_2830_1466_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	8x1x2x11x2x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          ||||||||XX|X||||||||||X|X||
T:               ---------TGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:         10   T001030311112222320311101112320031330001102..2323..    36        
--
>665_1495_3251_F3	ENSMUST00000113126	-	2603	2627	13	37	50	170	2x1x4x3x15	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                             ||XX|||X||X||||||||||||||
T:               ------------TAgaCAGaGGtGTGGTGTGGTGTCA-------------
R:         13   T131020103003030311232031110111101112113332..02313.    37        
--
>665_2826_745_F3	ENSMUST00000113126	+	2706	2723	25	42	50	160	6x12	
G:       2706    GCCAGGGCCACAGCCGATATCTTATACGACCTGTGTTTAGGACATTTTTT    2723      
                                         ||||||X|||||||||||
T:               ------------------------TACGACcTGTGTTTAGGA--------
R:         25   T100302010303133123023202131321121111003202..31001.    42        
--
>665_2977_1910_F3	ENSMUST00000113126	+	2589	2616	7	34	50	160	2x3x1x5x2x2x13	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                       ||X||XX||||X|X|X||||||||||||
T:               ------GGtACccAGCAcCcTgACACCACACCAC----------------
R:          7   T122320102313112310032021110111101122033331..01232.    34        
--
>666_873_2103_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x8x1x2x7x2x7x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X||||||X|X||||||X||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAAtCT-----------
R:          9   T001330311112222320111101112023001130122211.32023..    39        
--
>666_1743_3356_F3	ENSMUST00000113126	-	2601	2617	23	39	50	170	17	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                       |||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAGG-----------
R:         23   T231020103031303233232031110111101112120222.10211..    39        
--
>666_1793_730_F3	ENSMUST00000113126	+	2603	2627	21	45	50	180	1x4x16x4	
G:       2603    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                     |X|||X|||||||||||||||X|||
T:               --------------------TgACAcCACACCACACCTCTGtCTA-----
R:         21   T313020203303031323130221130111101111022212.23012..    45        
--
>666_1837_2355_F3	ENSMUST00000113126	-	2597	2623	16	42	50	190	3x11x2x6x5	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                |||X||||||||||X|X|||||X||||
T:               ---------------CAGaGGTGTGGTGTgGtGTCAGgGTGC--------
R:         16   T130201030313112312320111101112031121230113.11322..    42        
--
>666_2329_3774_F3	ENSMUST00000113126	-	2602	2621	19	38	50	160	1x3x16	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                   |X||X|||||||||||||||
T:               ------------------GaGGtGTGGTGTGGTGTCAG------------
R:         19   T233020103020030003132031110111101112123021.03013..    38        
--
>666_2746_4318_F3	ENSMUST00000113126	-	2590	2615	21	46	50	170	1x13x2x6x4	
G:       2615    TCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTACCCCT    2590      
                                     |X||||||||||||X|X|||||X|||
T:               --------------------TgGTGTGGTGTCAGgGtGCTGGgTAC----
R:         21   T023302010303133123123201111011121210213210.23131..    46        
--
>666_3412_3253_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	13x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||||X||||
T:               ----------------------ACACCACACCACAcCTCT----------
R:         23   T231220103003013101232031110111101113022201.00313..    40        
--
>667_2048_1198_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x12x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X|||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAT-------------
R:          9   T00133031111232232031110111232000313033010222001112    37        
--
>667_2057_2508_F3	ENSMUST00000113126	+	2589	2621	7	39	50	156	2x3x1A4x2x1x2x8x9	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                       ||X||X ||||X|XX|X|||||||X||||||||
T:               ------GGtACcAAGCAcCctGaCACCACAcCACACCTC-----------
R:          7   T20130100031310231203313111011130111102203313312300    39        
--
>667_2595_2919_F3	ENSMUST00000113126	-	2599	2623	18	42	50	170	3x3x8x8x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |||X||X|||||||X|||||||X||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGgGT--------
R:         18   T02330201030313112312320311101112011121230120002133    42        
--
>668_648_4308_F3	ENSMUST00000113126	-	2604	2628	12	36	50	170	2x1x2x13x7	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                            ||XX|X||||||||||||X||||||
T:               -----------GTagAcAGAGGTGTGGTGtGGTGTC--------------
R:         12   T01002013301212020122201111011310111223.300..2200..    36        
--
>668_914_1495_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T02330201030313112312320111101112011121.233..0303..    38        
--
>668_1423_661_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x8x8	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||X|||||||
T:               --------------GACAGaGGtGTGGTGTgGTGTCAG------------
R:         15   T01102010123001321123203111011120111212.333..2223..    38        
--
>668_2077_3971_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	1x5x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |X||||X|||||||||||||||
T:               ----------------CaGAGGtGTGGTGTGGTGTCAG------------
R:         17   T23102010303001022322200111011110111212.013..3320..    38        
--
>668_2156_3259_F3	ENSMUST00000113126	-	2600	2620	20	40	50	160	3x14x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||X|||
T:               -------------------AGGtGTGGTGTGGTGTCaGGG----------
R:         20   T00202010323331023123203111011110111202.233..3312..    40        
--
>668_2218_2084_F3	ENSMUST00000113126	-	2600	2624	16	40	50	166	2x2C16x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                ||X| ||||||||||||||||X|||
T:               ---------------ACaGCGGTGTGGTGTGGTGTCaGGG----------
R:         16   T23102010300303031323301111011110111202.202..3212..    40        
--
>668_3134_2663_F3	ENSMUST00000113126	-	731	753	2	24	50	150	1x2x4x6x10	
G:        753    CCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    731       
                  |X|X|||X|||||X|||||||||
T:               -CaGcAATaTGCAGgCAGTAGGCA--------------------------
R:          2   T31020103031312231213203133011220103320.001..1323..    24        
--
>668_3794_976_F3	ENSMUST00000113126	-	2593	2625	15	47	50	172	2x3x3x14C3C6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                               ||X||X||X||||||||||||| ||| ||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCCGGGCGCTGGG---
R:         15   T23122010323133323123203111011110111203.033..0000..    47        
--
>668_3833_1874_F3	ENSMUST00000113126	-	2604	2629	11	36	50	186	2x1G5x17	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||X |||||X||||||||||||||||
T:               ----------TGtGGACAGaGGTGTGGTGTGGTGTC--------------
R:         11   T23102010300101021123201111011110111203.010..1221..    36        
--
>669_358_1802_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000133121.300.0.333..    33        
--
>669_455_1353_F3	ENSMUST00000113126	-	2604	2624	16	36	50	150	1x3x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                |X||X||X|||||||||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTC--------------
R:         16   T33202010303331303123203111011110111202.201.3.332..    36        
--
>669_1496_2596_F3	ENSMUST00000113126	-	2598	2625	14	41	50	170	2x3x3x10x6x4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                              ||X||X||X|||||||||X|||||X|||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAGgGTG---------
R:         14   T13013103031313231232031110111102112121.311.3.200..    41        
--
>669_1679_1227_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	x6x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 X|||||X||||||||||||||
T:               ----------------cAGAGGtGTGGTGTGGTGTCA-------------
R:         17   T23302010321331313122203111011110111211.033.1.033..    37        
--
>669_2075_2738_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	1x2x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |X|X||X|||||||||||||||
T:               ----------------CaGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302010301301300323203111011110111212.303.3.303..    38        
--
>669_2105_3202_F3	ENSMUST00000113126	-	2600	2629	11	40	50	170	1x3x5x3x12x2x4	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                           |X||X||||X||X|||||||||||X|X|||
T:               ----------TgTAgACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         11   T23002010323313321123203111011110112202.332.1.030..    40        
--
>669_2719_1611_F3	ENSMUST00000113126	-	2604	2627	13	36	50	160	2x2x3x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X|X||X||X|||||||||||||
T:               ------------TAgAcAGaGGtGTGGTGTGGTGTC--------------
R:         13   T23302010320003020123203111011110111202.330.3.122..    36        
--
>669_3247_2281_F3	ENSMUST00000113126	-	89	116	10	37	50	180	2x2x2x3x2x17	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    89        
                          ||X|X|X||X|X||||||||||||||||
T:               ---------GTcAtCaCTgGtCACGTGTGACTGTCGA-------------
R:         10   T23302010331311231230221131111212112322.001.3.303..    37        
--
>669_3357_1081_F3	ENSMUST00000113126	-	2600	2625	15	40	50	170	1x4x5x11x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |X|||X||||X||||||||||X||||
T:               --------------GaCAGaGGTGtGGTGTGGTGTcAGGG----------
R:         15   T23102020303000131123201131011110111312.223.3.333..    40        
--
>670_2114_5074_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223203111011123200010002013330..1033.    33        
--
>671_513_1126_F3	ENSMUST00000113126	-	91	116	10	35	50	160	2x4x3x2x2x13	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                          ||X|||X||X|X|X||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTC---------------
R:         10   T200201030313132312302231311112121121020301...2302.    35        
--
>671_888_2903_F3	ENSMUST00000113126	+	2599	2620	17	38	50	166	3x2T16	
G:       2599    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                 |||X| ||||||||||||||||
T:               ----------------ACCcTTACACCACACCACACCT------------
R:         17   T200020103000323121032031110111101111020021...1311.    38        
--
>671_1281_2192_F3	ENSMUST00000113126	-	2603	2620	20	37	50	160	3x15	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    |||X||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCA-------------
R:         20   T233001103313000301232031110111101112133332...3322.    37        
--
>671_1463_1261_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x14x1x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||||XX|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCagGGT---------
R:         17   T231020103103030121232031110111101112010012...1221.    41        
--
>671_1594_5066_F3	ENSMUST00000113126	+	2393	2416	16	39	50	166	13x2T1x7	
G:       2393    ATCTCCTCATAGCAAGTATGATATGGTCAGCCTGCCTCTCTGACCTATCT    2416      
                                |||||||||||||X| |X||||||
T:               ---------------GTATGATATGGTCaGTCtGCCTCT-----------
R:         16   T303101030313132313312333101222121130222133...2133.    39        
--
>671_1746_2173_F3	ENSMUST00000113126	-	2060	2099	9	48	50	190	1x3x5x1x2x7x2x8x3x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X||||||X|X|||||||X||X|||||||
T:               --------CtGAgAGCTccAaCCACAGcTtTTGTAATcTGcCTGTTCA--
R:          9   T001330311112322320311101112121001130312100...1213.    48        
--
>671_3092_1002_F3	ENSMUST00000113126	-	770	789	9	28	50	160	7x2x11	
G:        789    TGCATGCGGTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    770       
                         |||||||X|X||||||||||
T:               --------GTGGCGGaAaATCCGTGTCG----------------------
R:          9   T203131311110330002032031112313330132331112...2322.    28        
--
>671_3357_1108_F3	ENSMUST00000113126	-	2606	2627	13	34	50	180	10x7x5	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                             ||||||||||X||||||X||||
T:               ------------TAGACAGAGGtGTGGTGtGGTG----------------
R:         13   T233020103013032211222031110113101102013233...2133.    34        
--
>671_3560_4908_F3	ENSMUST00000113126	+	2610	2627	23	40	50	160	11x7	
G:       2610    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2627      
                                       |||||||||||X||||||
T:               ----------------------ACACCACACCTcTGTCTA----------
R:         23   T301020103010313221232031110111102021122322...2232.    40        
--
>672_218_3274_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	2x3x3x2x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X|X|||||||||||||
T:               --------------GAcAGaGGtGtGGTGTGGTGTCAG------------
R:         15   T333020103030203201232031310111101112123333.2.211.3    38        
--
>672_434_3141_F3	ENSMUST00000113126	-	2602	2623	20	41	50	160	3x3x8x8	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |||X||X|||||||X|||||||
T:               -------------------CAGaGGtGTGGTGTgGTGTCAG---------
R:         20   T121233020103033310331232031110111201112122.3.302.3    41        
--
>672_650_3420_F3	ENSMUST00000113126	-	2598	2625	15	42	50	180	2x3x3x15x1x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                               ||X||X||X||||||||||||||XX|||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCAggGTG--------
R:         15   T213020103032011231232031110111101112101011.1.223.1    42        
--
>672_1008_3190_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T203020103012030301232031110111101112122003.3.213.1    38        
--
>672_1271_2582_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	2x2x3x16	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                ||X|X||X|||||||||||||||
T:               ---------------ACaGaGGtGTGGTGTGGTGTCAG------------
R:         16   T233020103033013313232021110111101112123113.2.220.1    38        
--
>672_2164_531_F3	ENSMUST00000113126	-	722	754	1	33	50	176	2x2x8x1A11x2x3x3	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    722       
                 ||X|X|||||||X |||||||||||X|X||X||
T:               TCaGcAATATGCaAGCAGTAGGCACtGaCAtTG-----------------
R:          1   T020201033313002312132031131111001220012232.2.130.0    33        
--
>672_2560_2859_F3	ENSMUST00000113126	-	87	116	10	39	50	180	2x2x2x3x2x2x17	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    87        
                          ||X|X|X||X|X|X||||||||||||||||
T:               ---------GTcAtCaCTgGtCaCGTGTGACTGTCGAAT-----------
R:         10   T200201030313112312302221311112121123203123.3.003.0    39        
--
>672_3589_414_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x15x2x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||||||||||||||X|X||
T:               ----------------CAGaGGTGTGGTGTGGTGtCaGG-----------
R:         17   T231021103001011021232011110111101102020233.3.033.0    39        
--
>672_3906_1494_F3	ENSMUST00000113126	-	2599	2629	11	41	50	170	2x2x2x3x3x13x3x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                           ||X|X|X||X||X||||||||||||X||X||
T:               ----------TGtAgAcAGaGGtGTGGTGTGGTGTcAGgGT---------
R:         11   T131020103031333231232031110111101113121012.0.320.0    41        
--
>673_1287_3735_F3	ENSMUST00000113126	-	719	750	5	36	50	186	4x4x1A11x2x3x6	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     ||||X|||X |||||||||||X|X||X|||||
T:               ----CAATaTGCaAGCAGTAGGCACtGaCAtTGTCA--------------
R:          5   T13110103031300231213203111111110112123.033...0003.    36        
--
>673_1402_3734_F3	ENSMUST00000113126	+	2588	2620	6	38	50	156	1x2x3x3x4x1x2T12x4	
G:       2588    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                      |X|X||X||X|||XX| ||||||||||||X|||
T:               -----AgGtACcCAgCACccTTACACCACACCACaCCT------------
R:          6   T23302310331301331123203111011110112102.010...2131.    38        
--
>673_1415_1273_F3	ENSMUST00000113126	-	2600	2620	20	40	50	160	3x14x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||X|||
T:               -------------------AGGtGTGGTGTGGTGTCaGGG----------
R:         20   T23302010323002332123203111011110111202.220...1123.    40        
--
>673_2392_2162_F3	ENSMUST00000113126	-	2599	2623	18	42	50	180	3x11x2x9	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |||X||||||||||X|X||||||||
T:               -----------------CAGaGGTGTGGTGTgGtGTCAGGGT--------
R:         18   T03230201030313112312320111101112021121.001...1322.    42        
--
>673_2396_3575_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	3x2x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||X|X||X|||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010303331121323203111011110111202.332...3131.    36        
--
>673_3108_4634_F3	ENSMUST00000113126	-	2605	2625	15	35	50	150	x5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               X||||X||X||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGT---------------
R:         15   T23302010303133321123203111011110111313.222...2123.    35        
--
>673_3462_3333_F3	ENSMUST00000113126	+	2591	2620	9	38	50	160	3x1x5x2x3x7x2x7	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                         |||XX||||X|X||X||||||X|X||||||
T:               --------TACccAGCAcCcTGaCACCACaCcACACCT------------
R:          9   T13320102031311231203213111011212111102.103...3333.    38        
--
>673_3816_2703_F3	ENSMUST00000113126	-	2600	2626	14	40	50	160	1x5x3x12x2x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              |X||||X||X|||||||||||X|X|||
T:               -------------AgACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         14   T33102010300301021123203111011110112202.232...2212.    40        
--
>673_3847_1415_F3	ENSMUST00000113126	-	2600	2620	20	40	50	180	3x18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAGGG----------
R:         20   T03302010301301002323203111011110111212.333...1031.    40        
--
>674_2304_1763_F3	ENSMUST00000113126	-	2603	2620	20	37	50	160	3x15	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    |||X||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCA-------------
R:         20   T31002010303031022123203111011110111210.332...00...    37        
--
>674_4053_3224_F3	ENSMUST00000113126	-	2607	2628	12	33	50	160	1x2x15x4	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTACTGTTTGAAAAAAAAT    2607      
                            |X|X||||||||||||||X|||
T:               -----------GtAgACAGAGGTGTGGTGtGGT-----------------
R:         12   T22101030321203021122201111011310122200.222...23...    33        
--
>675_1868_2519_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T21102010303031121323203111011110111212.200...310.1    38        
--
>675_1869_2517_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T21102010303031121323203111011110111212.022...113.1    38        
--
>675_2100_1309_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23302010320003010123203111011110111201.222...002.1    36        
--
>675_2725_881_F3	ENSMUST00000113126	-	2600	2620	20	40	50	180	3x18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X|||||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAGGG----------
R:         20   T01222013303002021223200111011110111212.033...123.0    40        
--
>675_2769_2651_F3	ENSMUST00000113126	-	2070	2098	10	38	50	210	8x1x2x9x9	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                          ||||||||XX|X||||||||X||||||||
T:               ---------TGAGAGCTccAaCCACAGCTtTTGTAATC------------
R:         10   T31103031311222232031110111232300113032.002...323.1    38        
--
>675_2905_3066_F3	ENSMUST00000113126	-	2604	2625	14	35	50	160	2x3x3x14	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAATC    2604      
                              ||X||X||X|||||||||||||
T:               -------------GAcAGaGGtGTGGTGTGGTGTC---------------
R:         14   T13020103031313231232031110111101112021.003...323.1    35        
--
>676_893_2634_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T233020133011030301132031110111101110022212..223120    41        
--
>676_1140_1170_F3	ENSMUST00000113126	-	2602	2629	11	38	50	180	x4x3x2x5x14	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           X|||X||X|X||||X|||||||||||||
T:               ----------tGTAgACaGaGGTGtGGTGTGGTGTCAG------------
R:         11   T010020133031131212232011210111101112122232..020020    38        
--
>676_1161_2617_F3	ENSMUST00000113126	-	2604	2629	11	36	50	180	2x2x5x3x14	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||X|X||||X||X|||||||||||||
T:               ----------TGtAgACAGaGGtGTGGTGTGGTGTC--------------
R:         11   T231020103001030211232031110111101112323210..030222    36        
--
>676_1605_4049_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	1x5x3x10x6	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X||||X||X|||||||||X|||||
T:               -------------AgACAGaGGtGTGGTGTGGtGTCAG------------
R:         14   T310020103030313211232031110111102112122233..032031    38        
--
>676_1727_1538_F3	ENSMUST00000113126	-	2600	2626	15	41	50	190	1x3x5x8x10	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                               |X||X||||X|||||||X|||||||||
T:               --------------AgACaGAGGtGTGGTGTgGTGTCAGGG---------
R:         15   T132302010303131121322203111011120111212003..323110    41        
--
>676_1858_2590_F3	ENSMUST00000113126	-	2605	2629	11	35	50	170	4x2x3x3x13	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                           ||||X|X||X||X||||||||||||
T:               ----------TGTAgAcAGaGGtGTGGTGTGGTGT---------------
R:         11   T233021103031133231232031110111101110112312..232223    35        
--
>676_2714_2965_F3	ENSMUST00000113126	-	2071	2098	10	37	50	180	3x5x1x2x14x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                          |||X||||XX|X|||||||||||||X||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGTaAT-------------
R:         10   T311330310112322320311101112320001110303203..211031    37        
--
>677_1518_4911_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x13x3	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X||||||||||||X||
T:               ------------GAGCTccAaCCACAGCTTTTGtAA--------------
R:         13   T00133031111212232031110111232000103001.302...02...    36        
--
>677_1815_818_F3	ENSMUST00000113126	+	98	115	23	40	50	170	18	
G:         98    TTCTAGCTCATATTCGACAGTCACACGTGACCAGTGATGACACAGGAATG    115       
                                       ||||||||||||||||||
T:               ----------------------ACACGTGACCAGTGATGA----------
R:         23   T00330200330300232313303111311210121123.323...12...    40        
--
>677_1860_1599_F3	ENSMUST00000113126	-	2600	2631	9	40	50	176	2x4x2x2T3x12x6	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                         ||X|||X|X| |||X|||||||||||X|||||
T:               --------GGtGTAgAcATAGGtGTGGTGTGGTGtCAGGG----------
R:          9   T23112011203113023133202111011110112212.333...33...    40        
--
>677_3017_1910_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T10302010303131123123203111011110111213.203...13...    37        
--
>678_353_1004_F3	ENSMUST00000113126	-	91	125	1	35	50	170	1x5x2x1x2x4x3x2x2x13	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                 |X||||X|XX|X|||X||X|X|X||||||||||||
T:               CaTTCCtGtgTcATCaCTgGtCaCGTGTGACTGTC---------------
R:          1   T23302011231313231230222131111212112021.121..222210    35        
--
>678_709_2594_F3	ENSMUST00000113126	+	2597	2622	15	40	50	170	5x2x10x5x4	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                               |||||X|X|||||||||X||||X|||
T:               --------------GCACCcTgACACCACACcACACcTCT----------
R:         15   T23122011320223331103222111011113111112.232..003021    40        
--
>678_1678_107_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111222232031110111232000103001.202..202022    36        
--
>678_2757_3850_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010300301301123203111011110111201.203..300132    36        
--
>678_3318_4037_F3	ENSMUST00000113126	+	1353	1377	16	40	50	160	2x3x2x3x15	
G:       1353    TCAATCGATTGTGACCTGCTCTGTGCCTGTGACCTTGCCGAGGAGAAGAG    1377      
                                ||X||X|X||X||||||||||||||
T:               ---------------CTgCTcTgTGcCTGTGACCTTGCCG----------
R:         16   T02130201030313212332323111021112102013.212..223333    40        
--
>678_3701_1793_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x7x2x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||X|X|||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAAT-------------
R:          9   T00133031111222232031110111202300113030.332..310022    37        
--
>678_4093_1272_F3	ENSMUST00000113126	-	2600	2627	13	40	50	170	2x5x3x12x2x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                             ||X||||X||X|||||||||||X|X|||
T:               ------------TAgACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         13   T23332010320303321123203111011110113202.003..222312    40        
--
>679_1308_628_F3	ENSMUST00000113126	-	2600	2625	15	40	50	190	5x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||X|||||||||||||X|||
T:               --------------GACAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23102010303301021123203111011110111232.001..33033.    40        
--
>679_1808_4900_F3	ENSMUST00000113126	-	2071	2099	9	37	50	150	1x3x5x1x2x9x2x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||X|X|||||
T:               --------CtGAgAGCTccAaCCACAGCTtTtGTAAT-------------
R:          9   T00133031111232232031110111232303113031.102..33221.    37        
--
>679_2652_888_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x8x8	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||X|||||||
T:               --------------GACAGaGGtGTGGTGTgGTGTCAG------------
R:         15   T23102010303131121123203111011120111212.003..02133.    38        
--
>679_3089_3468_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x7x2x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X|X||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAA--------------
R:          9   T00133031111222232031110111222300113020.021..30032.    36        
--
>679_3340_728_F3	ENSMUST00000113126	-	2060	2099	9	48	50	150	1x3x5x1x2x11x2x3x1x4x4x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X||||||||||X|X||XX|||X|||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAAtcTGCcTGTtCA--
R:          9   T00133031111232232031110111232003133000.333..13213.    48        
--
>679_3398_4156_F3	ENSMUST00000113126	-	2603	2627	14	38	50	176	2x2T13x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X| |||||||||||||X||||||
T:               -------------TAgATAGAGGTGTGGTGTgGTGTCA------------
R:         14   T02330201030323312332220111101112011121.231..22223.    38        
--
>680_3382_1610_F3	ENSMUST00000113126	-	719	754	1	36	50	200	x4x4x6x10x1x2x3x6	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                 X|||X|||X|||||X|||||||||XX|X||X|||||
T:               tCAGcAATaTGCAGgCAGTAGGCActGaCAtTGTCA--------------
R:          1   T12120103031312231213203133111110112102.112..220000    36        
--
>680_3503_3692_F3	ENSMUST00000113126	-	722	752	3	33	50	170	2x3x1x6x10x3x2x4	
G:        752    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    722       
                   ||X||XX|||||X|||||||||X||X|X|||
T:               --AGcAAtaTGCAGgCAGTAGGCAcTGaCaTTG-----------------
R:          3   T10220101031312231213203122111230122302.303..023221    33        
--
>680_4292_1161_F3	ENSMUST00000113126	-	2606	2627	13	34	50	180	1x9x12	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                             |X||||||||X|||||||||||
T:               ------------TaGACAGAGGtGTGGTGTGGTG----------------
R:         13   T23302010302001221122203111011110112332.212..323232    34        
--
>681_169_3213_F3	ENSMUST00000113126	-	2601	2623	16	38	50	170	3x3x8x9	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                |||X||X|||||||X||||||||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGG------------
R:         16   T233020103331002312320311101112011121201301..22203.    38        
--
>681_980_2592_F3	ENSMUST00000113126	-	2602	2623	16	37	50	180	3x3x16	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||X|||||||||||||||
T:               ---------------CAGaGGtGTGGTGTGGTGTCAG-------------
R:         16   T233020103032222312320311101111011121212101..23033.    37        
--
>681_1162_1380_F3	ENSMUST00000113126	+	2589	2616	7	34	50	160	2x3x2x4x3x2x12	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                       ||X||X|X|||X||X|X|||||||||||
T:               ------GGtACcCaGCAcCCtGaCACCACACCAC----------------
R:          7   T233020103313022312003131110111101133033002..22031.    34        
--
>681_1838_2058_F3	ENSMUST00000113126	-	2071	2095	13	37	50	170	5x1x2x14x3	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                             |||||XX|X|||||||||||||X||
T:               ------------GAGCTccAaCCACAGCTTTTGTaAT-------------
R:         13   T001330311112122320311101112320001120302332..20302.    37        
--
>681_2526_2778_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T323020103030011211232031110111101112030212..23202.    36        
--
>681_3664_900_F3	ENSMUST00000113126	+	2595	2623	13	41	50	176	1x4x2x2T13x6	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                             |X|||X|X| |||||||||||||X|||||
T:               ------------CaGCAcCcTTACACCACACCACAcCTCTG---------
R:         13   T200201030313102312032031110111101110022210..32001.    41        
--
>682_196_599_F3	ENSMUST00000113126	-	2603	2624	16	37	50	180	4x3x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                ||||X||X||||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCA-------------
R:         16   T233021103033011011232031110111101112131122.3.30230    37        
--
>682_313_1729_F3	ENSMUST00000113126	-	2601	2620	20	39	50	160	x3x17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    X||X||||||||||||||||
T:               -------------------aGGtGTGGTGTGGTGTCAGG-----------
R:         20   T133220103230030203332031110111101112120312.3.02012    39        
--
>682_518_4563_F3	ENSMUST00000113126	-	2596	2622	21	47	50	170	3x3x4x12x5	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                     |||X||X|||X|||||||||||X||||
T:               --------------------AGAgGTgTGGtGTGGTGTCAGGgTGCT---
R:         21   T330313021330201030313223012110311101112120.2.02202    47        
--
>682_563_2420_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T211020103033330211232031110111101112002213.3.00113    36        
--
>682_642_4041_F3	ENSMUST00000113126	-	2602	2629	11	38	50	160	x4x2x3x3x8x8	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           X|||X|X||X||X|||||||X|||||||
T:               ----------tGTAgAcAGaGGtGTGGTGTgGTGTCAG------------
R:         11   T233020100131130231232031110111201112122332.2.33311    38        
--
>682_789_711_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||X||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T001330311112022320311101112020001130021313.3.32100    36        
--
>682_1541_3007_F3	ENSMUST00000113126	-	2077	2098	21	42	50	160	2x7x2x11	
G:       2098    CTGCTCATGGATTCTCCCTTTGAGAGCTCCAACCACAGCTTTTCACCATG    2077      
                                     ||X||||||X|X||||||||||
T:               --------------------TGaGAGCTCcAaCCACAGCTTT--------
R:         21   T102110111302010303233102223223111011123200.3.23203    42        
--
>682_1569_2710_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T233020103013313131232031110111101112122103.0.23202    38        
--
>682_1840_2360_F3	ENSMUST00000113126	-	2602	2626	14	38	50	190	3x3x3x16	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |||X||X||X|||||||||||||||
T:               -------------AGAcAGaGGtGTGGTGTGGTGTCAG------------
R:         14   T233020103033012231232031110111101112122130.1.23002    38        
--
>682_2044_2934_F3	ENSMUST00000113126	-	2592	2624	16	48	50	182	4x3x12x4A4C4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2592      
                                ||||X||X|||||||||||X||| |||| ||||
T:               ---------------ACAGaGGtGTGGTGTGGTGtCAGAGTGCCGGGT--
R:         16   T233120103010033111232031110111101102122211.0.30111    48        
--
>682_2095_2933_F3	ENSMUST00000113126	-	84	116	10	42	50	170	2x4x3x2x2x1x12x2x5	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGTGAAATTG    84        
                          ||X|||X||X|X|XX|||||||||||X|X||||
T:               ---------GTcATCaCTgGtCacGTGTGACTGTCgAaTATG--------
R:         10   T233020103313132312302230311112121121233331.2.00122    42        
--
>682_2734_2919_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	5x3x13x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X||||||||||||X||
T:               --------------GACAGaGGtGTGGTGTGGTGTcAG------------
R:         15   T103020103013010211232031110111101113122203.3.30000    38        
--
>682_3155_3925_F3	ENSMUST00000113126	+	2591	2620	9	38	50	146	x3x2x4x2x2T12x4	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                         X||X|X|||X|X| ||||||||||||X|||
T:               --------tACcCaGCAcCcTTACACCACACCACaCCT------------
R:          9   T233201030313032313032031110111101131023232.2.30333    38        
--
>682_3162_1925_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T001330311112222320311101112320001230001232.2.20232    36        
--
>682_3357_3948_F3	ENSMUST00000113126	-	2605	2632	8	35	50	160	1x2x4x2x3x3x13	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                        |X|X|||X|X||X||X||||||||||||
T:               -------TgGtGTAgAcAGaGGtGTGGTGTGGTGT---------------
R:          8   T233120100031130231232031110111101113022312.2.32202    35        
--
>682_3647_2178_F3	ENSMUST00000113126	+	2595	2613	13	31	50	170	10x9	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2613      
                             ||||||||||X||||||||
T:               ------------CAGCACCCTGaCACCACAC-------------------
R:         13   T133101033313212311002131110111122130013332.1.02302    31        
--
>682_4293_1776_F3	ENSMUST00000113126	-	720	753	2	35	50	166	1x2x4x6x11x1C2x1x5	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                  |X|X|||X|||||X||||||||||X ||XX||||
T:               -CaGcAATaTGCAGgCAGTAGGCACtCACatTGTC---------------
R:          2   T130201030313122312132031102113001120123333.1.20002    35        
--
>683_1318_3844_F3	ENSMUST00000113126	+	2605	2629	23	47	50	170	x18x1x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                       X|||||||||||||||||XX|||||
T:               ----------------------aCACCACACCACACCTCTgtCTACA---
R:         23   T233020103000033023032031110111101111022203..211330    47        
--
>683_1324_2861_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	15x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||||||||||||||X|||
T:               -------------------AGGTGTGGTGTGGTGtCAG------------
R:         20   T010022133030111312232011110111101122123112..222031    38        
--
>683_2469_1620_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	2x5x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X||||X||X|||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T233002103020031211232031110111101112032233..210230    36        
--
>683_2810_2435_F3	ENSMUST00000113126	+	2602	2620	20	38	50	170	16x3	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                    ||||||||||||||||X||
T:               -------------------CTGACACCACACCACAcCT------------
R:         20   T233020103032213231232121110111101110020220..311302    38        
--
>683_2981_4151_F3	ENSMUST00000113126	-	2599	2620	20	41	50	200	17x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                    |||||||||||||||||X||||
T:               -------------------AGGTGTGGTGTGGTGTCaGGGT---------
R:         20   T111232330201030313112011110111101112020012..230322    41        
--
>683_3061_3481_F3	ENSMUST00000113126	-	2599	2623	18	42	50	170	3x3x8x8x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |||X||X|||||||X|||||||X||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGgGT--------
R:         18   T023302010303131123123203111011120111212301..020220    42        
--
>683_3589_347_F3	ENSMUST00000113126	-	2600	2622	18	40	50	190	2x3x18	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                  ||X||X|||||||||||||||||
T:               -----------------AGaGGtGTGGTGTGGTGTCAGGG----------
R:         18   T333020103333311213232031110111101112120000..332322    40        
--
>683_3785_1451_F3	ENSMUST00000113126	-	2601	2622	18	39	50	180	17x1x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  |||||||||||||||||XX|||
T:               -----------------AGAGGTGTGGTGTGGTGtcAGG-----------
R:         18   T001330311112222302222011110111101100120303..222332    39        
--
>684_120_1816_F3	ENSMUST00000113126	-	2598	2622	21	45	50	190	10x9x6	
G:       2622    AAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGAAAAA    2598      
                                     ||||||||||X||||||||X|||||
T:               --------------------AGAGGTGTGGtGTGGTGTCaGGGTG-----
R:         21   T200332203330202010030222011110311101112220..013011    45        
--
>684_1281_2712_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T233020103031333231232031110111101112122231..303231    38        
--
>684_1309_2909_F3	ENSMUST00000113126	-	2605	2626	14	35	50	180	6x3x13	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              ||||||X||X||||||||||||
T:               -------------AGACAGaGGtGTGGTGTGGTGT---------------
R:         14   T233020103033012211232031110111101111021302..022032    35        
--
>684_1360_3815_F3	ENSMUST00000113126	-	2598	2620	19	41	50	170	3x8x8x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                                   |||X|||||||X|||||||X|||
T:               ------------------AGGtGTGGTGTgGTGTCAGgGTG---------
R:         19   T130201030313102312320311101112011121210111..233330    41        
--
>684_1527_3460_F3	ENSMUST00000113126	-	2600	2626	14	40	50	170	3x3x3x2x13x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              |||X||X||X|X||||||||||||X||
T:               -------------AGAcAGaGGtGtGGTGTGGTGTCAgGG----------
R:         14   T231020103013012231232021210111101112100023..031233    40        
--
>684_1733_2294_F3	ENSMUST00000113126	-	2597	2623	16	42	50	170	3x3x8x2x7x4	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                |||X||X|||||||X|X||||||X|||
T:               ---------------CAGaGGtGTGGTGTgGtGTCAGGgTGC--------
R:         16   T130201030313112312320311101112021121202113..213223    42        
--
>684_1887_2363_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	3x2x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||X|X||X|||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTC--------------
R:         15   T323020103033311213232031110111101112330031..332230    36        
--
>684_1973_872_F3	ENSMUST00000113126	-	2225	2250	16	41	50	160	1x5x3x1x11x5	
G:       2250    AGGATGATGGGGAGGACGCACGCACGCACGCACCCACGCATTCCAATGAG    2225      
                                |X||||X||XX||||||||||X||||
T:               ---------------AcGCACgCAcgCACGCACCCAcGCAT---------
R:         16   T130203330020103003311231213113311001233133..132310    41        
--
>684_2075_3357_F3	ENSMUST00000113126	+	2595	2620	13	38	50	166	4x3x2T12x4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                             ||||X||X| ||||||||||||X|||
T:               ------------CAGCaCCcTTACACCACACCACaCCT------------
R:         13   T321002303311312331032031110111101131023103..232233    38        
--
>684_2184_2726_F3	ENSMUST00000113126	-	2060	2099	9	48	50	172	1x3x5x1x2x15x1A2x1G7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X||||||||||||||X ||X |||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAaACTgGCTGTTCA--
R:          9   T001330311112322320111101112320001131012203..202120    48        
--
>684_2843_4489_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	x7x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             X||||||X||X|||||||||||||
T:               ------------tAGACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T233020103033032211232031110111101112033203..232232    36        
--
>684_2979_1924_F3	ENSMUST00000113126	-	2602	2625	15	38	50	180	1x4x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |X|||X||X|||||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCAG------------
R:         15   T233020103223000111232031110111101112122033..210211    38        
--
>684_3286_2370_F3	ENSMUST00000113126	-	719	750	5	36	50	180	x4x6x11x1x1x2x7	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|||X|||||X||||||||||XXX|X||||||
T:               ----cAATaTGCAGgCAGTAGGCACtgaCaTTGTCA--------------
R:          5   T002201030313122312132031110112301121033301..203212    36        
--
>684_3305_3032_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T313302010303131123123201111011120111213201..323110    38        
--
>684_3412_336_F3	ENSMUST00000113126	-	2250	2270	4	24	50	156	7x9T4	
G:       2270    TATAGAAGGCTACGCACGCACGCACGACACGGATTTTCCGCCACTGGATT    2250      
                    |||||||X|||||||| ||||
T:               ---AGAAGGCtACGCACGCTCGCA--------------------------
R:          4   T001222020303133113322331311112320332210102..311033    24        
--
>685_1676_3512_F3	ENSMUST00000113126	-	2594	2623	18	47	50	190	1x17x4x2x1x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                  |X||||||||||||||||X|||X|XX||||
T:               -----------------CaGAGGTGTGGTGTGGTGtCAGgGtgCTGG---
R:         18   T3123020103031031230222011110111101132122023.0101..    47        
--
>685_1971_4591_F3	ENSMUST00000113126	+	1364	1386	21	43	50	190	9x2x12	
G:       1364    GATTGTGACCTGCTCTGTGCCTGTGACCTTGCCGAGGAGAAGAGCCCCAG    1386      
                                     |||||||||X|X|||||||||||
T:               --------------------CTGTGACCTtGcCGAGGAGAAGA-------
R:         21   T0233020103031331231212111210231203220222022.2222..    43        
--
>685_2651_4806_F3	ENSMUST00000113126	-	2075	2100	8	33	50	180	2x8x1x2x13	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                        ||X|||||||XX|X||||||||||||
T:               -------TCtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          8   T1110303121122223203111011123200013313311022.2100..    33        
--
>685_2957_3558_F3	ENSMUST00000113126	-	719	750	5	36	50	186	x4x5A11x2x3x6	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|||X|||| |||||||||||X|X||X|||||
T:               ----cAATaTGCAAGCAGTAGGCACtGaCAtTGTCA--------------
R:          5   T1122010303131023121320311311111011210121313.0032..    36        
--
>685_3623_3212_F3	ENSMUST00000113126	-	2602	2632	8	38	50	176	1x3x1C4x2x3x16	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                        |X||X ||||X|X||X|||||||||||||||
T:               -------TgGTgCAGACaGaGGtGTGGTGTGGTGTCAG------------
R:          8   T2330121030103122132320311101111011121231201.0220..    38        
--
>686_1392_3358_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	1x3x3x16	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                |X||X||X|||||||||||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCAG------------
R:         16   T2010201330330030212320311101111011121223023.20300.    38        
--
>686_1398_4252_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	4x3x7x9	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                ||||X||X||||||X||||||||
T:               ---------------ACAGaGGtGTGGTGtGGTGTCAG------------
R:         16   T2330201030133110112320311101131011121233133.32032.    38        
--
>686_1647_227_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x13x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X||||||||||||X||||
T:               -------------------AGGtGTGGTGTGGTGTcAGGG----------
R:         20   T2312201030100332111320311101111011101200030.11011.    40        
--
>686_2043_2312_F3	ENSMUST00000113126	-	2601	2625	15	39	50	190	5x3x14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||||X||
T:               --------------GACAGaGGtGTGGTGTGGTGTCaGG-----------
R:         15   T2030101030320132112320311101111011120203013.31001.    39        
--
>686_2375_4367_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||X||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T0013303111123223203111011120200011300123020.22212.    36        
--
>686_2606_2322_F3	ENSMUST00000113126	-	2597	2625	14	42	50	170	2x3x3x10x6x2x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                              ||X||X||X|||||||||X|||||X|X||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAGgGtGC--------
R:         14   T1331010303131323123203111011110211212200133.13212.    42        
--
>686_4086_4727_F3	ENSMUST00000113126	-	1611	1635	7	31	50	176	4x4C2x14	
G:       1635    AGGAGAACCAGACTAGAGGCCAGTGTCACTGGCTCACGTATCTAAGCAGC    1611      
                       ||||X||| ||X|||||||||||||
T:               ------ACCAgACTCGAgGCCAGTGTCACTG-------------------
R:          7   T0013313101121223200301211121121012032223232.33313.    31        
--
>687_2284_579_F3	ENSMUST00000113126	-	2595	2620	19	44	50	170	3x11x5x2x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                                   |||X||||||||||X||||X|X||||
T:               ------------------AGGtGTGGTGTGGTgTCAGgGtGCTG------
R:         19   T130201030313102312320311101111013121220013.2.0020.    44        
--
>688_380_682_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x10x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||X|||||
T:               --------CtGAgAGCTccAaCCACAGCTTtTGTAA--------------
R:          9   T001330311112322320311101112320301130110002...3313.    36        
--
>688_3887_3456_F3	ENSMUST00000113126	-	2595	2614	20	39	50	160	2x9x9	
G:       2614    TAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGAAAATCCCTCA    2595      
                                    ||X||||||||X||||||||
T:               -------------------GGtGTGGTGTCaGGGTGCTG-----------
R:         20   T233320130313132312320311101112020011321211...0132.    39        
--
>689_1406_497_F3	ENSMUST00000113126	-	2602	2618	18	34	50	170	17	
G:       2618    TCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAAAATCCCT    2602      
                                  |||||||||||||||||
T:               -----------------GTGTGGTGTGGTGTCAG----------------
R:         18   T023302010303331221111101111011121222333312..11323.    34        
--
>689_1680_4665_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T231020103000010211232031110111101112223223..33032.    36        
--
>689_1856_549_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x3x5x1x2x7x9x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X||||||X||||||||X||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAAtCT-----------
R:          9   T001330311112022320311101112220001130022302..33223.    39        
--
>689_1983_1216_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T233020103031313111232031110111101112330003..33130.    36        
--
>689_2165_3815_F3	ENSMUST00000113126	-	2604	2623	20	39	50	160	1x10x9	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAA    2604      
                                    |X|||||||||X||||||||
T:               -------------------CaGAGGTGTGGtGTGGTGTC-----------
R:         20   T203111232330203000330222011110311101112322..21020.    39        
--
>689_3378_4367_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x7x2x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X|X||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAA--------------
R:          9   T001330311112222320311101112223001130111313..10222.    36        
--
>689_4088_1678_F3	ENSMUST00000113126	-	2068	2099	9	40	50	186	1x8x1x2x13C2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X|||||||XX|X|||||||||||| ||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGCAAtCTG----------
R:          9   T001330311112222320311101112320001310122122..13203.    40        
--
>690_1548_2724_F3	ENSMUST00000113126	-	2591	2620	20	49	50	166	x3x17C1x8	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                                    X||X|||||||||||||||| |X|||||||
T:               -------------------aGGtGTGGTGTGGTGTCAGGCTgCTGGGTA-
R:         20   T33202010303301011113203111011110111212.320...1013.    49        
--
>690_1902_4101_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	1x4x3x12x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |X|||X||X|||||||||||X|||
T:               --------------GaCAGaGGtGTGGTGTGGTGtCAG------------
R:         15   T23332010322003301123203111011110112212.002...0000.    38        
--
>690_2054_4892_F3	ENSMUST00000113126	-	2592	2625	15	48	50	166	5x3x10x2x5C2x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2592      
                               |||||X||X|||||||||X|X|||| ||X|||||
T:               --------------GACAGaGGtGTGGTGTGGtGtCAGGCTGcTGGGT--
R:         15   T23302010103133321123203111011110210212.321...3012.    48        
--
>690_2106_1819_F3	ENSMUST00000113126	-	2600	2623	17	40	50	190	3x3x18	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAGGG----------
R:         17   T31002010303331323123203111011110111212.230...3013.    40        
--
>691_150_1884_F3	ENSMUST00000113126	-	2603	2627	13	37	50	170	7x1x1x1x15	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                             |||||||XXXX||||||||||||||
T:               ------------TAGACAGaggtGTGGTGTGGTGTCA-------------
R:         13   T02023010333233221123033111011110111213.301...3202.    37        
--
>691_292_4010_F3	ENSMUST00000113126	-	2600	2620	20	40	50	160	3x9x9	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X||||||||X||||||||
T:               -------------------AGGtGTGGTGTGgTGTCAGGG----------
R:         20   T23302010303101233123203111011113111212.020...2023.    40        
--
>691_792_787_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	3x3x8x8	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||X|||||||
T:               ----------------CAGaGGtGTGGTGTgGTGTCAG------------
R:         17   T23320010303233023123203111011120111212.013...2103.    38        
--
>691_1092_3540_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	x6x12x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 X|||||X|||||||||||X|||
T:               ----------------cAGAGGtGTGGTGTGGTGtCAG------------
R:         17   T23101010321003310122203111011110113212.003...3003.    38        
--
>691_1577_4690_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000122100.332...2222.    33        
--
>691_1985_1152_F3	ENSMUST00000113126	-	2605	2631	9	35	50	170	2x4x2x3x3x13	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                         ||X|||X|X||X||X||||||||||||
T:               --------GGtGTAgAcAGaGGtGTGGTGTGGTGT---------------
R:          9   T23302310303113123123203111011110111133.032...2311.    35        
--
>691_2469_2437_F3	ENSMUST00000113126	-	2604	2628	12	36	50	170	1x2x5x3x14	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                            |X|X||||X||X|||||||||||||
T:               -----------GtAgACAGaGGtGTGGTGTGGTGTC--------------
R:         12   T23302010300303021123203111011110111202.213...2231.    36        
--
>691_3282_1642_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	2x3x3x10x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               ||X||X||X|||||||||X|||||
T:               --------------GAcAGaGGtGTGGTGTGGtGTCAG------------
R:         15   T23302010323130023123203111011110211212.133...3023.    38        
--
>691_3633_3037_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111222232031110111232300113012.202...2022.    36        
--
>691_3836_915_F3	ENSMUST00000113126	-	2957	2984	1	28	50	186	3x1T3x6x14	
G:       2984    TTGAATATGTGACAAGATTTAATGACCAAATCCAACTATCATTCTAGCTC    2957      
                 |||X |||X|||||X|||||||||||||
T:               TTGaTTATgTGACAaGATTTAATGACCA----------------------
R:          1   T00133033311211222300303121011100121302.203...2233.    28        
--
>692_397_4188_F3	ENSMUST00000113126	-	77	104	22	49	50	180	3x1x5x2x14x3	
G:        104    CTCTGTATTTGAATTTTTAGCCACGTGTGACTGTCGAATATGAGCTAGAG    77        
                                      |||XX||||X|X|||||||||||||X||
T:               ---------------------CACgtGTGAcTgTCGAATATGAGCTaGA-
R:         22   T0202010303131023123203111011120201232033312232222.    49        
--
>692_2623_2226_F3	ENSMUST00000113126	-	88	114	12	38	50	170	4x3x2x2x11x5	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    88        
                            ||||X||X|X|X||||||||||X||||
T:               -----------CATCaCTgGtCaCGTGTGACTGtCGAA------------
R:         12   T2330211033131323123022013111121212232020033023011.    38        
--
>692_2997_4142_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	14x2x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  ||||||||||||||X|X|||||
T:               -----------------CAGAGGTGTGGTGTgGtGTCAG-----------
R:         18   T0233020103031311231222011110111203112123212320301.    39        
--
>692_3877_1538_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T0013303111122223203111011123200011233131032233211.    34        
--
>693_254_1323_F3	ENSMUST00000113126	-	2596	2623	20	47	50	196	1x10x11A5	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                    |X|||||||||X|||||||||| |||||
T:               -------------------CaGAGGTGTGGtGTGGTGTCAGAGTGCT---
R:         20   T1102303223302010303302220111103111011121222.23222.    47        
--
>693_417_1789_F3	ENSMUST00000113126	-	1433	1468	1	36	50	172	1x3x1x4G3x3x3T1x15	
G:       1468    GTGGCTGCGTCGGACTCGAAGTACAGGTGCTTGTAGCAGAAGGAGAAGAA    1433      
                 |X||XX||| |||X||X|| |X||||||||||||||
T:               GtGGctGCGGCGGaCTcGATGtACAGGTGCTTGTAG--------------
R:          1   T1310201330330012032310311201132011320232202.20313.    36        
--
>693_462_4764_F3	ENSMUST00000113126	-	2602	2622	18	38	50	170	2x3x16	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||X|||||||||||||||
T:               -----------------AGaGGtGTGGTGTGGTGTCAG------------
R:         18   T2330201330323112132320311101111011121220231.20100.    38        
--
>693_3379_1460_F3	ENSMUST00000113126	-	718	750	5	37	50	170	x4x6x11x2x2x3x2x3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                     X|||X|||||X||||||||||X|X|X||X|X||
T:               ----cAATaTGCAGgCAGTAGGCACtGaCaTTgTcAT-------------
R:          5   T1032010303131223121320311011133031313211333.30110.    37        
--
>694_111_1488_F3	ENSMUST00000113126	-	2605	2626	14	35	50	160	1x5x3x13	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              |X||||X||X||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGT---------------
R:         14   T23102020302301321123203111011110111022223300131..3    35        
--
>694_1617_3668_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x3x5x1x2x14x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X||X||||XX|X|||||||||||||X|X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaAtCT-----------
R:          9   T00133031111202232031110111232000111012230023012..2    39        
--
>695_1444_2054_F3	ENSMUST00000113126	-	138	158	24	44	50	170	15x2x4	
G:        158    TTTTCTAATGTCTTCCATTCCTAGTCAACGTCATGATCAATGAGATTTGT    138       
                                        |||||||||||||||X|X|||
T:               -----------------------GTCAACGTCATGATCaAtGAG------
R:         24   T00130201030313112311310112101312131232200122010032    44        
--
>695_2073_1592_F3	ENSMUST00000113126	-	2596	2623	20	47	50	186	1x6x4x13G3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                    |X|||||X|||X|||||||||||| |||
T:               -------------------CaGAGGTgTGGtGTGGTGTCAGGGGGCT---
R:         20   T32121101133020103033022201211031110111212000032303    47        
--
>696_1429_17_F3	ENSMUST00000113126	-	2065	2099	9	43	50	170	1x3x5x1x2x13x2x1x4x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAGATCTT    2065      
                         |X||X||||XX|X||||||||||||X|XX|||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAatCTGcCT-------
R:          9   T00133031111232232031110111232000133112210020112...    43        
--
>698_328_2681_F3	ENSMUST00000113126	-	2601	2617	21	37	50	170	17	
G:       2617    ATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGTGAAAAAAAATCC    2601      
                                     |||||||||||||||||
T:               --------------------TGTGGTGTGGTGTCAGG-------------
R:         21   T20221032313112312323311101111011121203.330...323..    37        
--
>698_744_195_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	x8x2x11x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               X|||||||X|X||||||||||X||
T:               --------------gACAGAGGtGtGGTGTGGTGTcAG------------
R:         15   T01332010303031321122203131011110111012.301...330..    38        
--
>698_1199_2168_F3	ENSMUST00000113126	+	2595	2620	13	38	50	180	1x9x8x4x4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                             |X||||||||X|||||||X|||X|||
T:               ------------CaGCACCCTGaCACCACAcCACaCCT------------
R:         13   T20031103031313231100213111011100112102.320...010..    38        
--
>698_1717_4783_F3	ENSMUST00000113126	+	2595	2629	13	47	50	196	1x5G5x14x3x6	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                             |X|||| |||||X|||||||||||||X||X|||||
T:               ------------CaGCACGCTGACaCCACACCACACCTcTGtCTACA---
R:         13   T10320103031310231133212131011110111102.010...310..    47        
--
>698_3158_2140_F3	ENSMUST00000113126	-	2593	2623	17	47	50	170	x6x2x14x3x6	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                 X|||||X|X|||||||||||||X||X|||||
T:               ----------------cAGAGGtGtGGTGTGGTGTCAGgGTgCTGGG---
R:         17   T23302010303331113122200121011110111212.012...302..    47        
--
>698_4265_3306_F3	ENSMUST00000113126	-	724	754	1	31	50	176	2x2x4x5A11x2x4	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    724       
                 ||X|X|||X|||| |||||||||||X|X|||
T:               TCaGcAATaTGCAAGCAGTAGGCACtGaCAT-------------------
R:          1   T02020103031310231213203113111132213103.231...201..    31        
--
>699_1563_1371_F3	ENSMUST00000113126	-	2068	2089	19	40	50	160	2x13x3x4	
G:       2089    TTCTCCCTTATCCAAGTACAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                                   ||X||||||||||||X||X|||
T:               ------------------CAaCCACAGCTTTTGtAAtCTG----------
R:         19   T320330310112032320311101112320001230122103..31123.    40        
--
>699_3578_1257_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x6x2x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X|||||X|X|||||||||||||
T:               --------------gACAGAgGtGTGGTGTGGTGTC--------------
R:         15   T233020103233310211223031110111101112322313..22222.    36        
--
>700_488_3127_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	1x5x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |X||||X||||||||||||||
T:               ----------------CaGAGGtGTGGTGTGGTGTCA-------------
R:         17   T0103123031201130322220311101111011121131022..2333.    37        
--
>700_718_2311_F3	ENSMUST00000113126	-	2605	2626	14	35	50	160	1x5x3x13	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              |X||||X||X||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGT---------------
R:         14   T2330201003330102112320311101111011131003033..2131.    35        
--
>700_780_1938_F3	ENSMUST00000113126	-	2602	2628	12	38	50	190	1x3x4x3x16	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                            |X||X|||X||X|||||||||||||||
T:               -----------GtAGaCAGaGGtGTGGTGTGGTGTCAG------------
R:         12   T2330201030300320112320311101111011121233300..2121.    38        
--
>700_867_2624_F3	ENSMUST00000113126	-	2599	2623	17	41	50	190	x6x15x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 X|||||X||||||||||||||X|||
T:               ----------------cAGAGGtGTGGTGTGGTGTCAgGGT---------
R:         17   T2330201030323103312220311101111011121300133..0032.    41        
--
>700_1176_2058_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T2330203230313332302320111101111011120020321..3123.    36        
--
>700_1933_629_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	3x2x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               |||X|X||X||||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTCA-------------
R:         15   T2330201030313312132320311101111011121332033..3113.    37        
--
>700_2191_2280_F3	ENSMUST00000113126	-	2312	2337	10	35	50	160	1x2x12x4x3x4	
G:       2337    TCATCTGTTCACTGTCACACTATATTACCAGCACCCCGAAGCTCAATGAC    2312      
                          |X|X|||||||||||X|||X||X|||
T:               ---------CaCtGTCACACTATAtTACcAGcACC---------------
R:         10   T2330201030313112111123330031112011030230003..3203.    35        
--
>700_2291_1416_F3	ENSMUST00000113126	-	2599	2623	18	42	50	170	3x11x6x2x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  |||X||||||||||X|||||X|X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCaGgGT--------
R:         18   T0233020103031311231232011110111201112323013..2233.    42        
--
>700_2345_3587_F3	ENSMUST00000113126	-	2596	2620	19	43	50	170	3x8x2x8x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||||||X|X|||||||X|||
T:               ------------------AGGtGTGGTGTgGtGTCAGGGtGCT-------
R:         19   T2303210303131023123202111011120311212003132..3012.    43        
--
>700_2364_3121_F3	ENSMUST00000113126	-	719	753	2	36	50	190	2x1x4x6x11x2x4x1x4	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  ||XX|||X|||||X||||||||||X|X|||XX|||
T:               -CAgcAATaTGCAGgCAGTAGGCACtGaCATtgTCA--------------
R:          2   T1313010303131223121320311311113221210110122..1231.    36        
--
>700_2681_2394_F3	ENSMUST00000113126	-	2594	2617	23	46	50	180	13x4x7	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                       |||||||||||||X|||X||||||
T:               ----------------------TGTGGTGTGGTGTcAGGgTGCTGG----
R:         23   T3030301031123003023320311101111011131203113..3112.    46        
--
>700_3084_2313_F3	ENSMUST00000113126	-	2601	2620	20	39	50	160	3x12x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||X|||||||||||X||||
T:               -------------------AGGtGTGGTGTGGTGtCAGG-----------
R:         20   T2330201002101330102320311101111011321203310..0100.    39        
--
>701_834_3713_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	13x5x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       |||||||||||||X||||X||
T:               ----------------------ACACCACACCACAcCTCTgTC-------
R:         23   T2330201030203132312300311101111011100222212.22223.    43        
--
>701_1669_2575_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T2330201030030112112320311101111011131033333.12232.    35        
--
>701_2064_3437_F3	ENSMUST00000113126	-	2602	2627	13	38	50	166	2x5x2A13x3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                             ||X||||X| |||||||||||||X||
T:               ------------TAgACAGaGATGTGGTGTGGTGTcAG------------
R:         13   T2330201030310332112322311101111011101233230.20111.    38        
--
>701_3192_4223_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	14x4x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       ||||||||||||||X|||X||
T:               ----------------------ACACCACACCACACcTCTgTC-------
R:         23   T1330201032323100212320311101111011111222212.31001.    43        
--
>701_3690_1089_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T2330201033310222312320311101111011121220030.21322.    38        
--
>701_3714_3485_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	x8x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X|||||||X|||||||||||||
T:               --------------gACAGAGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030300012112220311101111011120322023.23211.    36        
--
>702_3655_2173_F3	ENSMUST00000113126	+	1399	1423	22	46	50	190	x6x4x15	
G:       1399    AGGAGAAGAGCCCCAGTCACGCGGTGTTTAAGCTCACGTATCTAAGCAGC    1423      
                                      X|||||X|||X||||||||||||||
T:               ---------------------cGGTGTtTAAgCTCACGTATCTAAG----
R:         22   T32010303231323302303113011120300322113133223021221    46        
--
>703_380_4085_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x10x6	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X|||||||||X|||||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAG-------------
R:         14   T103201030313132312320311101111021121232310...232..    37        
--
>703_1502_3287_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T233020103003310211232031110111101112302233...120..    36        
--
>703_1890_809_F3	ENSMUST00000113126	-	2601	2623	18	40	50	190	3x15x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  |||X||||||||||||||X||||
T:               -----------------CAGaGGTGTGGTGTGGTGtCAGG----------
R:         18   T023302010303131123123201111011110113212022...322..    40        
--
>704_1062_407_F3	ENSMUST00000113126	-	720	750	5	35	50	190	4x6x11x2x3x2x3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                     ||||X|||||X||||||||||X|X||X|X||
T:               ----CAATaTGCAGgCAGTAGGCACtGaCAtTgTC---------------
R:          5   T120101030313122312132031131111002122120103..33013.    35        
--
>704_1196_954_F3	ENSMUST00000113126	-	2596	2623	18	45	50	180	3x3x8x9x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||X|||||||X||||||||X||||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGGgTGCT-----
R:         18   T023302010303131123123203111011120111212031..32203.    45        
--
>704_1925_477_F3	ENSMUST00000113126	+	2067	2082	16	31	50	160	16	
G:       2067    TCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAA    2082      
                                ||||||||||||||||
T:               ---------------GCAGATTACAAAAGCT-------------------
R:         16   T301020103031311231223031100023232113130210..30102.    31        
--
>704_2286_2277_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x2x13x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|X||||||||||||X|||
T:               ----------------CAGaGGtGtGGTGTGGTGTCAgGGT---------
R:         17   T233020103033313321212031010111101112130013..30112.    41        
--
>704_3947_2683_F3	ENSMUST00000113126	-	730	753	2	25	50	160	x3x4x6x11	
G:        753    CCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                  X||X|||X|||||X||||||||||
T:               -cAGcAATaTGCAGgCAGTAGGCAC-------------------------
R:          2   T301201030313122312132031111112000330132123..00223.    25        
--
>705_3206_1781_F3	ENSMUST00000113126	-	2593	2624	16	47	50	166	3x1x3x10x6x2C3x3	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                |||XX||X|||||||||X|||||X| |||X||
T:               ---------------ACAgaGGtGTGGTGTGGtGTCAGgGCGCTgGG---
R:         16   T233020103003030111132031110111102112122033323000.2    47        
--
>705_4154_836_F3	ENSMUST00000113126	-	2591	2612	21	42	50	180	9x9x4	
G:       2612    AAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCAA    2591      
                                     |||||||||X||||||||X|||
T:               --------------------TGTGGTGTCaGGGTGCTGgGTA--------
R:         21   T231210330131123123303111011122200113213013231322.3    42        
--
>706_2945_2779_F3	ENSMUST00000113126	-	714	750	5	41	50	190	x4x6x10x1x2x6x2x1x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGGAGACAGGT    714       
                     X|||X|||||X|||||||||XX|X|||||X|XX||||
T:               ----cAATaTGCAGgCAGTAGGCActGaCATTGtCatTGAG---------
R:          5   T233201030313122312132031311111301022101222.21301.3    41        
--
>706_3551_2231_F3	ENSMUST00000113126	-	2602	2629	11	38	50	180	4x2x3x3x10x6	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||||X|X||X||X|||||||||X|||||
T:               ----------TGTAgAcAGaGGtGTGGTGTGGtGTCAG------------
R:         11   T233320103231130231232031110111102112123322.03302.3    38        
--
>707_427_1744_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T023302010303131123123201111011120111212322.230220.    39        
--
>707_820_112_F3	ENSMUST00000113126	+	2204	2222	16	34	50	170	3x16	
G:       2204    GGAATTGAGGACCTAGCATGTGCCCAGCGTAAGTGCATGCGTGGGTGCGT    2222      
                                |||X|||||||||||||||
T:               ---------------GCAtGTGCCCAGCGTAAGT----------------
R:         16   T233020103031331031211130012331302122122210.010030.    34        
--
>707_1737_1235_F3	ENSMUST00000113126	-	81	116	10	45	50	170	2x2x2x3x2x2x13x4x2x4	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCAATTG    81        
                          ||X|X|X||X|X|X||||||||||||X|||X|X|||
T:               ---------GTcAtCaCTgGtCaCGTGTGACTGTCgAATaTgAGC-----
R:         10   T233020103313112312302231311112121121203233.233033.    45        
--
>707_2143_1736_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	5x1x15	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||||XX||||||||||||||
T:               -------------------AGGTGtgGTGTGGTGTCAGGG----------
R:         20   T111232330201030313112011320111101112120030.331321.    40        
--
>707_2218_1291_F3	ENSMUST00000113126	-	2600	2621	19	40	50	160	1x3x10x8	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                   |X||X|||||||||X|||||||
T:               ------------------GaGGtGTGGTGTGGtGTCAGGG----------
R:         19   T031020103032333231132031110111102112120000.232113.    40        
--
>707_2601_466_F3	ENSMUST00000113126	-	2595	2620	21	46	50	170	11x7x1x2x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||||||||||X||||||XX|X||||
T:               --------------------AGGTGTGGTGTgGTGTCAggGtGCTG----
R:         21   T023302010303130123123201111011120111213300.221221.    46        
--
>707_3425_3416_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T001330311112022320311101112323001130001202.200022.    36        
--
>707_3947_3149_F3	ENSMUST00000113126	-	2597	2625	14	42	50	170	2x3x3x10x2x4x5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                              ||X||X||X|||||||||X|X|||X||||
T:               -------------GAcAGaGGtGTGGTGTGGtGtCAGgGTGC--------
R:         14   T121201030313132312320311101111021321210113.123221.    42        
--
>708_215_3213_F3	ENSMUST00000113126	+	2067	2082	16	31	50	160	16	
G:       2067    TCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAA    2082      
                                ||||||||||||||||
T:               ---------------GCAGATTACAAAAGCT-------------------
R:         16   T233020103030310231223031100023200230020102..21301.    31        
--
>708_1419_4079_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T001330311112222320311101112320001330001003..31112.    36        
--
>708_1655_3730_F3	ENSMUST00000113126	-	2230	2250	12	32	50	176	9G11	
G:       2250    TGATGGGGAGGACGCACGCACGCACGCACCCATGGATTCCAATGAGCCCA    2230      
                            ||||||||| |||||||||||
T:               -----------ACGCACGCAGGCACGCACCCA------------------
R:         12   T013330211300133113312031133110012220003122..30231.    32        
--
>708_1925_2800_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T001330311112022320311101112320001130113302..33022.    36        
--
>708_3928_4070_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T001330311112022320311101112323001130101223..33132.    36        
--
>708_4226_2929_F3	ENSMUST00000113126	-	2592	2614	17	39	50	170	2x13x4x4	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2592      
                                 ||X||||||||||||X|||X|||
T:               ----------------GGtGTGGTGTCAGGGtGCTgGGT-----------
R:         17   T001330311112022320311101112120031320001113..10223.    39        
--
>709_252_4449_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	3x2x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               |||X|X||X||||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTCA-------------
R:         15   T3230021030331132132320211101111011121313132.23313.    37        
--
>709_1058_4749_F3	ENSMUST00000113126	-	2601	2625	14	38	50	170	2x3x3x10x7	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                              ||X||X||X|||||||||X||||||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAGG------------
R:         14   T1212010303131323123203111011110211212021021.22121.    38        
--
>709_1281_453_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	10x8	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||X|||||||
T:               ----------------------ACACCACACCaCACCTCT----------
R:         23   T2330201030030112112320311101111021110222003.32022.    40        
--
>709_1715_1427_F3	ENSMUST00000113126	-	2600	2628	12	40	50	170	2x3x3x3x13x2x3	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                            ||X||X||X||X||||||||||||X|X||
T:               -----------GTaGAcAGaGGtGTGGTGTGGTGTcAgGG----------
R:         12   T0200201030301022312320311101111011131000222.12122.    40        
--
>709_1726_4744_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T0013303111120223203111011123220011301013201.23203.    36        
--
>709_2420_183_F3	ENSMUST00000113126	-	2600	2625	14	39	50	160	2x3x3x8x2x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                              ||X||X||X|||||||X|X|||||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGG-----------
R:         14   T1302010303131323123203111011120211212000010.31021.    39        
--
>709_2900_2348_F3	ENSMUST00000113126	-	719	750	5	36	50	186	x4x5A11x2x3x6	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|||X|||| |||||||||||X|X||X|||||
T:               ----cAATaTGCAAGCAGTAGGCACtGaCAtTGTCA--------------
R:          5   T2031010303131023121320311311112011210121333.20303.    36        
--
>710_324_933_F3	ENSMUST00000113126	-	2597	2626	14	43	50	166	1x2x3x3x15A2x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                              |X|X||X||X|||||||||||||| ||X||
T:               -------------AgAcAGaGGtGTGGTGTGGTGTCAAGGtGC-------
R:         14   T2330021030330102012320311101111011121020313..0023.    43        
--
>710_643_3032_F3	ENSMUST00000113126	-	2603	2626	14	37	50	180	1x5x3x15	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                              |X||||X||X||||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTCA-------------
R:         14   T2330201030030202112320311101111011121010233..0201.    37        
--
>710_1876_3711_F3	ENSMUST00000113126	-	287	329	4	46	50	182	x5x6x1C3x1x2x2x2G7x12	
G:        329    GGCGCGGAGTCGTTCTAATCTTTGAGCTGTGTTTGAGCGTCTTCTAAATC    287       
                    X||||X|||||X |||XX|X|X| |||||||X|||||||||||
T:               ---gCGGAgTCGTTcCAATctTtGaGGTGTGTTTgAGCGTCTTCTA----
R:          4   T2032330211231010103310311201111100022331220..2121.    46        
--
>710_2232_3569_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	3x3x3x8x8	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |||X||X||X|||||||X|||||||
T:               -------------AGAcAGaGGtGTGGTGTgGTGTCAG------------
R:         14   T0130201332313122312320311101112011121223323..2020.    38        
--
>710_2499_3177_F3	ENSMUST00000113126	-	2600	2626	14	40	50	216	9x14G3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              |||||||||X||||||||||||| |||
T:               -------------AGACAGAGGtGTGGTGTGGTGTCGGGG----------
R:         14   T2330201030330122112220311101111011123000330..2232.    40        
--
>710_3416_3808_F3	ENSMUST00000113126	-	2605	2627	13	35	50	176	6T3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             |||||| |||X||||||||||||
T:               ------------TAGACATAGGtGTGGTGTGGTGT---------------
R:         13   T2330201030332322113320311101111011111121223..3323.    35        
--
>711_817_3064_F3	ENSMUST00000113126	-	2599	2625	14	40	50	170	2x3x3x8x2x9	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                              ||X||X||X|||||||X|X||||||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGGT----------
R:         14   T2333201303131023123203111011120211212001012.2120..    40        
--
>711_1047_1069_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223201111011123200010131123020.3202..    33        
--
>711_1300_3243_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	6x1x2x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              ||||||XX|X|||||||||||||
T:               -------------AGACAGagGtGTGGTGTGGTGTC--------------
R:         14   T2330201030303122112310311101111011120222203.2221..    36        
--
>711_3096_2067_F3	ENSMUST00000113126	-	2072	2099	9	36	50	200	1x8x2x10x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||X|X|||||||||X||||||
T:               --------CtGAGAGCTcCaACCACAGCTtTTGTAA--------------
R:          9   T0013303111122223200001011123220011301123031.3222..    36        
--
>712_2230_3029_F3	ENSMUST00000113126	-	2602	2622	18	38	50	190	5x16	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  |||||X|||||||||||||||
T:               -----------------AGAGGtGTGGTGTGGTGTCAG------------
R:         18   T03230201030313012322203111011110111212220022312100    38        
--
>712_2519_160_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||X||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23032010300331023123203111011110111210333323033311    37        
--
>712_3628_2639_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x14x2x5x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X|||||||||||||X|X||||X||
T:               ---------------GAcAGAGGTGTGGTGTgGtGTCAgGG---------
R:         16   T11330201030313112312220111101112021121300022211133    41        
--
>714_687_3161_F3	ENSMUST00000113126	-	2593	2625	14	46	50	176	2x3x3x8x2x9C1x4	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAATC    2593      
                              ||X||X||X|||||||X|X|||||||| |X|||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGGTCCtGGG----
R:         14   T20020103031313231232031110111202112120012001000222    46        
--
>715_1963_2238_F3	ENSMUST00000113126	-	2594	2625	14	45	50	186	2x3x3x8x2x8C5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                              ||X||X||X|||||||X|X||||||| |||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGGCGCTGG-----
R:         14   T31020103031313231232031110111202112120033321010322    45        
--
>718_463_3837_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T133031311211223000033031110111101111022220..13311.    40        
--
>718_967_645_F3	ENSMUST00000113126	-	2602	2628	12	38	50	170	1x2x5x3x13x3	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                            |X|X||||X||X||||||||||||X||
T:               -----------GtAgACAGaGGtGTGGTGTGGTGTcAG------------
R:         12   T103020103232030211232031110111101113122020..23330.    38        
--
>718_2269_2051_F3	ENSMUST00000113126	-	2601	2626	14	39	50	180	3x3x3x10x7	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                              |||X||X||X|||||||||X||||||
T:               -------------AGAcAGaGGtGTGGTGTGGtGTCAGG-----------
R:         14   T211020103030312231232031110111102112120220..13101.    39        
--
>718_3299_2293_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T001330311112322320311101112320001130100202..31112.    36        
--
>719_3245_1228_F3	ENSMUST00000113126	-	2601	2625	15	39	50	190	5x3x12x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               |||||X||X|||||||||||X||||
T:               --------------GACAGaGGtGTGGTGTGGTGtCAGG-----------
R:         15   T233320103031310211232031110111101122120131..23112.    39        
--
>720_871_4166_F3	ENSMUST00000113126	-	2601	2620	20	39	50	160	3x14x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||X|||||||||||||X||
T:               -------------------AGGtGTGGTGTGGTGTCaGG-----------
R:         20   T312302010303133123132031110111101112020322..32332.    39        
--
>720_889_3245_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T203302010123130023332031110111101110022210..32323.    41        
--
>720_1663_2138_F3	ENSMUST00000113126	-	2593	2620	19	46	50	166	3x8x2x9A5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAATC    2593      
                                   |||X|||||||X|X|||||||| |||||
T:               ------------------AGGtGTGGTGTgGtGTCAGGGTACTGGG----
R:         19   T132001030313102312320311101112021121200131..30010.    46        
--
>720_2211_2355_F3	ENSMUST00000113126	-	2596	2623	18	45	50	220	3x11x14	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |||X||||||||||X|||||||||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAGGGTGCT-----
R:         18   T020302010303132123123201111011120111212001..20122.    45        
--
>720_2477_3531_F3	ENSMUST00000113126	-	2599	2623	16	40	50	170	3x3x8x2x9	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                |||X||X|||||||X|X||||||||
T:               ---------------CAGaGGtGTGGTGTgGtGTCAGGGT----------
R:         16   T132101030313102312320311101112001121200131..33221.    40        
--
>720_2579_2394_F3	ENSMUST00000113126	-	2600	2623	16	39	50	180	3x3x8x10	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                |||X||X|||||||X|||||||||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGGG-----------
R:         16   T233121030313102312320311101112011121200302..30321.    39        
--
>720_2827_2887_F3	ENSMUST00000113126	-	2591	2623	16	48	50	190	3x3x12x4x2x6x3	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2591      
                                |||X||X|||||||||||X|||X|X|||||X||
T:               ---------------CAGaGGtGTGGTGTGGTGtCAGgGtGCTGGgTA--
R:         16   T233021030313112312320311101111011021220313..31132.    48        
--
>720_3222_1217_F3	ENSMUST00000113126	-	2593	2618	12	37	50	180	2x1x3x14x6	
G:       2618    CAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAGA    2593      
                            ||XX||X|||||||||||||X|||||
T:               -----------GTgtGGtGTGGTGTCAGGGTgCTGGG-------------
R:         12   T010303011123123103111011121200123210030331..00021.    37        
--
>720_3653_2172_F3	ENSMUST00000113126	-	2601	2620	20	39	50	160	3x12x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                    |||X|||||||||||X||||
T:               -------------------AGGtGTGGTGTGGTGtCAGG-----------
R:         20   T010303131123120310332031110111101122120302..10021.    39        
--
>720_3875_2796_F3	ENSMUST00000113126	-	2072	2100	8	36	50	170	2x4x4x1x2x13x3	
G:       2100    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                        ||X|||X|||XX|X||||||||||||X||
T:               -------TCtGAGaGCTccAaCCACAGCTTTTGtAA--------------
R:          8   T133030312112212320311101112320001230031003..32120.    36        
--
>720_3977_2096_F3	ENSMUST00000113126	+	2598	2622	16	40	50	176	4x2T10x8	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                ||||X| ||||||||||X|||||||
T:               ---------------CACCcTTACACCACACCaCACCTCT----------
R:         16   T001330311112322111032031110111103111022202..02131.    40        
--
>720_4090_3896_F3	ENSMUST00000113126	-	56	90	5	39	50	176	1x3x13x1x2x3x3A1x7	
G:         90    TTAGGAATATGAGCTAGAATGATAGTTGGATTGTCCAAGTAAATCTTGTC    56        
                     |X||X||||||||||||XX|X||X|| |X||||||
T:               ----GaATaTGAGCTAGAATGatAgTTgGAATgTCCAAG-----------
R:          5   T220103031312232322031113110202033120102323..30222.    39        
--
>721_1815_150_F3	ENSMUST00000113126	-	772	791	7	26	50	160	2x9x9	
G:        791    TGCATGCAGTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    772       
                       ||X||||||||X||||||||
T:               ------CAgTGGCGGAAaATCCGTGT------------------------
R:          7   T1022012111103302010320311101121010331320123..2013.    26        
--
>721_3552_1733_F3	ENSMUST00000113126	-	2075	2094	19	38	50	160	5x11x4	
G:       2094    ATGGATTCTCCCTTATCCAGCTCCAACCACAGCTTTTGACCATGAAGGAG    2075      
                                   |||||X||||||||||X|||
T:               ------------------AGCTCcAACCACAGCTtTTG------------
R:         19   T3133020103031311231232231010111232100133322..0211.    38        
--
>722_1316_2435_F3	ENSMUST00000113126	-	2601	2631	8	38	50	176	2x2C1x2x3x3x17	
G:       2631    AATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                        ||X| |X|X||X||X||||||||||||||||
T:               -------GGtGCAgAcAGaGGtGTGGTGTGGTGTCAGG------------
R:          8   T1002010303131123123203111011110111212031213.21022.    38        
--
>722_1611_3051_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	2x8x10x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X|||||||X|||||||||X|||
T:               ------------TAgACAGAGGtGTGGTGTGGtGTC--------------
R:         13   T2330201030323332112220311101111021120320331.33012.    36        
--
>722_1619_2993_F3	ENSMUST00000113126	-	2597	2620	19	42	50	180	3x8x2x11	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||X|X||||||||||
T:               ------------------AGGtGTGGTGTgGtGTCAGGGTGC--------
R:         19   T1302010303131023123203111011120211212001130.32032.    42        
--
>722_2042_287_F3	ENSMUST00000113126	-	2601	2623	18	40	50	170	3x3x8x9	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  |||X||X|||||||X||||||||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGG----------
R:         18   T3133020103031311231232031110111201112120210.30131.    40        
--
>722_2724_1613_F3	ENSMUST00000113126	-	2604	2628	12	36	50	170	3x2x3x3x14	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                            |||X|X||X||X|||||||||||||
T:               -----------GTAgAcAGaGGtGTGGTGTGGTGTC--------------
R:         12   T2312201030301332212320311101111011123022322.02202.    36        
--
>722_2965_1471_F3	ENSMUST00000113126	-	2604	2629	11	36	50	186	4x4T3x14	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||||X||| |||X|||||||||||||
T:               ----------TGTAgACATAGGtGTGGTGTGGTGTC--------------
R:         11   T2320201030311312113320311101111011120320212.12120.    36        
--
>722_3208_1573_F3	ENSMUST00000113126	+	170	196	14	40	50	170	11x7x2x2x2x3	
G:        170    ACCTAGAGAAGACTCATCCTCCGTCAGTGCCTGGAGACAGTGGGTCAGAA    196       
                              |||||||||||X||||||X|X|X|X||
T:               -------------TCATCCTCCGTcAGTGCCtGgAgAcAG----------
R:         14   T0013323111121321320220311121130012202012033.03123.    40        
--
>723_642_3496_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x12x2x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||X|X||||
T:               ----------------CAGaGGtGTGGTGTGGTGtCaGGGT---------
R:         17   T3230021030333133212320311101111011220200122.23201.    41        
--
>723_1621_205_F3	ENSMUST00000113126	-	91	116	11	36	50	180	2x2x5x5x12	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATT    91        
                           ||X|X||||X||||X|||||||||||
T:               ----------GTcAtCACTgGTCAcGTGTGACTGTC--------------
R:         11   T2330201030313112112301210311112121120321002.01211.    36        
--
>723_2403_3567_F3	ENSMUST00000113126	+	2596	2619	14	37	50	180	4x2x3x15	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                              ||||X|X||X||||||||||||||
T:               -------------AGCAcCcTGaCACCACACCACACC-------------
R:         14   T2330201030313023120321311101111011110033333.32100.    37        
--
>723_2768_644_F3	ENSMUST00000113126	+	2610	2626	23	39	50	170	17	
G:       2610    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2626      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCTCTGTCT-----------
R:         23   T2330001310311322312320311101111022211222012.03023.    39        
--
>723_3426_3129_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x14x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X|||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTaATC------------
R:          9   T0013303111120223203111011123200011203231110.20223.    38        
--
>724_229_3691_F3	ENSMUST00000113126	-	2602	2617	23	38	50	160	16	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                       ||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAG------------
R:         23   T2310201330010303132320311101111011121232003131112.    38        
--
>724_722_980_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T0233020103031311231232011110111001112112002300032.    38        
--
>725_447_242_F3	ENSMUST00000113126	+	116	139	26	49	50	200	14x10	
G:        116    GACAGTCACACGTGACCAGTGATGACACAGGAATGTGTGAGATGGTTCTC    139       
                                          ||||||||||||||X|||||||||
T:               -------------------------CACAGGAATGTGTGaGATGGTTCT-
R:         26   T100201030313132312330311101112020311111322..01022.    49        
--
>725_634_222_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x3x8x10	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||X|||||||X|||||||||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGGG---------
R:         16   T023302010303133123123203111011120111212003..31211.    41        
--
>725_1280_3436_F3	ENSMUST00000113126	-	2600	2617	23	40	50	160	14x4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                       ||||||||||||||X|||
T:               ----------------------TGTGGTGTGGTGTCaGGG----------
R:         23   T030303131123120023332331110111101112020031..30121.    40        
--
>725_1767_3410_F3	ENSMUST00000113126	+	2595	2622	13	40	50	200	5x5x11x1x6	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                             |||||X||||X||||||||||XX|||||
T:               ------------CAGCAcCCTGaCACCACACCAcaCCTCT----------
R:         13   T200201030313112312002131110111101021022231..21233.    40        
--
>725_3169_2295_F3	ENSMUST00000113126	-	2589	2615	19	45	50	170	1x2x13x1x10	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTACCCCTCA    2589      
                                   |X|X||||||||||||XX|||||||||
T:               ------------------TgGtGTGGTGTCAGGGtgCTGGGTACC-----
R:         19   T130201030313132312320311101112120023321001..23020.    45        
--
>726_534_2480_F3	ENSMUST00000113126	-	2604	2629	12	37	50	180	2x2x2x6x14	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                            ||X|X|X|||||X|||||||||||||
T:               -----------TGtAgAcAGAGGtGTGGTGTGGTGTC-------------
R:         12   T31230201030313312312220311101111011120322101221120    37        
--
>726_1578_1446_F3	ENSMUST00000113126	-	2591	2623	18	50	50	170	3x11x5x1x1x1x2x5x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2591      
                                  |||X||||||||||X||||XXXX|X||||X|||
T:               -----------------CAGaGGTGTGGTGTgGTGTcaggGtGCTGgGTA
R:         18   T31330201030313112312320111101112011102330313213013    50        
--
>726_2535_2119_F3	ENSMUST00000113126	+	1465	1487	25	47	50	170	15x3x2x3	
G:       1465    ACCTGTACTTCGAGTCCGACGCAGCCACAGTCAGTGAGATCGTGCTCAAG    1487      
                                         |||||||||||||||X||X|X||
T:               ------------------------CCACAGTCAGTGAGAtCGtGcTC---
R:         25   T13013103030313212332320110111212121122212331222231    47        
--
>729_1137_4676_F3	ENSMUST00000113126	+	785	827	7	49	50	162	3x2x5x2x1x4x1C1x1x1C3x7x10	
G:        785    TTTTCCGCCACTGGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAGTA    827       
                       |||X|X||||X|XX|||X |XX |||X||||||X|||||||||
T:               ------GCCaCtGGATtCcaATGaCCccCTTCaTAAGTTtGGCTTCAGT-
R:          7   T02020103031310231230031110120202033021031032021210    49        
--
>730_55_2385_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	2x5x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||X||||X|||||||||||||
T:               ---------------ACaGAGGtGTGGTGTGGTGTC--------------
R:         16   T2310211332030303132220311101111011120030301.321..1    36        
--
>730_65_2329_F3	ENSMUST00000113126	+	2594	2621	12	39	50	166	3x4x1x2T13x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            |||X|||XX| |||||||||||||X|||
T:               -----------CCAgCACccTTACACCACACCACAcCTC-----------
R:         12   T2310201332030103111320311101111011120223303.122..2    39        
--
>730_599_417_F3	ENSMUST00000113126	-	2600	2617	23	40	50	160	14x4	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                       ||||||||||||||X|||
T:               ----------------------TGTGGTGTGGTGTCaGGG----------
R:         23   T2310201330030111232320311101111011120200003.311..2    40        
--
>730_1934_3158_F3	ENSMUST00000113126	+	2602	2621	20	39	50	160	3x13x4	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                    |||X||||||||||||X|||
T:               -------------------CTGaCACCACACCACAcCTC-----------
R:         20   T2323302010003131023321311101111011120223031.112..2    39        
--
>730_2884_496_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	2x6x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X|||||X|||||||||||||
T:               --------------GAcAGAGGtGTGGTGTGGTGTC--------------
R:         15   T3203201030321302012220311101111011120122032.021..2    36        
--
>730_3578_3947_F3	ENSMUST00000113126	-	2252	2278	4	30	50	170	3x4x2x6x2x10	
G:       2278    TGCAAGGCCTTAGAAGGCTACGCACGCACGGTCGACACGGATTTTCCGCC    2252      
                    |||X|||X|X|||||X|X|||||||||
T:               ---AAGgCCTtAgAAGGCtAcGCACGCACG--------------------
R:          4   T3213022302330202030333311331132322331110222.033..1    30        
--
>731_199_2145_F3	ENSMUST00000113126	-	2603	2622	18	37	50	180	2x18	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                  ||X|||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTCA-------------
R:         18   T010020133031033232232011110111101112112232233011..    37        
--
>731_298_3643_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x10x6	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X|||||||||X|||||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAG-------------
R:         14   T310201030313132312320311101111001121212331313222..    37        
--
>732_1345_2458_F3	ENSMUST00000113126	+	2598	2627	16	45	50	166	3x1x2T2x11x10	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                |||XX| ||X||||||||||X|||||||||
T:               ---------------CACccTTACaCCACACCACAcCTCTGTCTA-----
R:         16   T233020103003331211232031210111101113022211..32233.    45        
--
>732_1724_2152_F3	ENSMUST00000113126	-	2592	2615	16	39	50	160	1x2x13x4x4	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2592      
                                |X|X||||||||||||X|||X|||
T:               ---------------TgGtGTGGTGTCAGGGtGCTgGGT-----------
R:         16   T001330311112322320311101112120001320001002..30222.    39        
--
>733_281_2790_F3	ENSMUST00000113126	+	2584	2621	2	39	50	178	1x2x5C4x1x3G2T12x5	
G:       2584    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                  |X|X|||| ||||XX|| || ||||||||||||X||||
T:               -GgCaAGGTCCCCAgcACGCTTACACCACACCACaCCTC-----------
R:          2   T2313302012000131113320311101111011310220333.212312    39        
--
>733_376_2725_F3	ENSMUST00000113126	+	2604	2620	22	38	50	170	17	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                      |||||||||||||||||
T:               ---------------------GACACCACACCACACCT------------
R:         22   T2313201032030110132322211101111011110231323.001000    38        
--
>733_1039_3438_F3	ENSMUST00000113126	-	2444	2463	1	20	50	160	1x8x11	
G:       2463    GTCTGGCTCCACAGCAGGCAATCGACGTCTACCTCCCCCTGCACTCCAGC    2444      
                 |X|||||||X||||||||||
T:               GtCTGGCTCcACAGCAGGCA------------------------------
R:          1   T1022103221111231203103313201123011011202103.002122    20        
--
>733_1486_2179_F3	ENSMUST00000113126	-	2599	2625	16	42	50	170	2x3x11x6x2x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||||||||||X|||||X|X||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCaGgGT--------
R:         16   T0233020103031331231232011110111201112023013.122102    42        
--
>734_1245_1752_F3	ENSMUST00000113126	-	2593	2623	18	48	50	190	3x11x2x4x5x3x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                  |||X||||||||||X|X|||X||||X||X||
T:               -----------------CAGaGGTGTGGTGTgGtGTCaGGGTgCTgGG--
R:         18   T0233020103031311231232011110111202112220013323000.    48        
--
>734_1926_288_F3	ENSMUST00000113126	+	2602	2627	20	45	50	180	3x11x2x7x3	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                    |||X||||||||||X|X||||||X||
T:               -------------------CTGaCACCACACCAcAcCTCTGTcTA-----
R:         20   T2330201030323310012321311101111013120222113232222.    45        
--
>734_3784_3793_F3	ENSMUST00000113126	-	2600	2623	18	41	50	180	3x11x7x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X||||||X||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGG---------
R:         18   T0233020103031311231232011110111201112130023332230.    41        
--
>735_621_2644_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030030113112320311101111011120230203302031.    36        
--
>735_660_2052_F3	ENSMUST00000113126	+	2593	2622	11	40	50	166	1x4x2T1x3x13x5	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           |X|||X| |X||X||||||||||||X||||
T:               ----------CcCAGcATCcTGaCACCACACCACAcCTCT----------
R:         11   T2330201030030120132321311101111011120222332032121.    40        
--
>735_695_3260_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2310201030130202012320311101111011110222202333102.    40        
--
>735_932_1607_F3	ENSMUST00000113126	+	2594	2621	12	39	50	180	3x4x1x3x13x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            |||X|||XX||X||||||||||||X|||
T:               -----------CCAgCACccTGaCACCACACCACAcCTC-----------
R:         12   T2330201030330113112321311101111011120220102333232.    39        
--
>735_1312_1910_F3	ENSMUST00000113126	+	1100	1117	32	49	50	160	12x6	
G:       1100    TGGAGAGCCAGAACGCCTGGGAGTTCTGCCTGGTTCGCGAGAACAGTTCA    1117      
                                                ||||||||||||X|||||
T:               -------------------------------GGTTCGCGAGAAcAGTTC-
R:         32   T1232003012230201030332012322113301023332220012102.    49        
--
>735_1811_4419_F3	ENSMUST00000113126	-	2597	2620	20	43	50	180	3x14x2x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X|||||||||||||X|X||||
T:               -------------------AGGtGTGGTGTGGTGTCaGgGTGC-------
R:         20   T2110201030003103012320311101111011120230113332130.    43        
--
>735_2208_683_F3	ENSMUST00000113126	+	2600	2631	18	49	50	172	2x2T16x2x1x4G3	
G:       2600    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                                  ||X| ||||||||||||||||X|XX||| |||
T:               -----------------CCcTTACACCACACCACACCTcTgtCTAGACC-
R:         18   T2033020103031300230320311101111011110232032232210.    49        
--
>735_2428_4524_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T0013303111123223203111011123200011301202010133222.    36        
--
>735_2468_1386_F3	ENSMUST00000113126	+	2589	2626	7	44	50	192	2x5x1x2x3x2T16x1G4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                       ||X||||XX|X||X| ||||||||||||||||X ||||
T:               ------GGtACCCagCaCCcTTACACCACACCACACCTcGGTCT------
R:          7   T3333230033100333010320311101111011110203012222233.    44        
--
>735_2558_679_F3	ENSMUST00000113126	+	2605	2624	23	42	50	180	13x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                       |||||||||||||X||||||
T:               ----------------------ACACCACACCACAcCTCTGT--------
R:         23   T0201020113032320233220311101111011100222110123022.    42        
--
>735_2871_2528_F3	ENSMUST00000113126	-	2595	2626	14	45	50	172	1x5x2A14x2x1A5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                              |X||||X| ||||||||||||||X|X |||||
T:               -------------AgACAGaGATGTGGTGTGGTGTCaGgATGCTG-----
R:         14   T2030201030013032112122311101111011120222313212232.    45        
--
>736_615_1224_F3	ENSMUST00000113126	-	731	750	5	24	50	160	4x6x10	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    731       
                     ||||X|||||X|||||||||
T:               ----CAATaTGCAGgCAGTAGGCA--------------------------
R:          5   T131101030313122312132031332113100220030332..220230    24        
--
>736_2729_3977_F3	ENSMUST00000113126	-	2600	2625	14	39	50	160	2x3x3x8x2x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                              ||X||X||X|||||||X|X|||||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGG-----------
R:         14   T211201030313132312320311101112021121200331..222221    39        
--
>736_3356_4328_F3	ENSMUST00000113126	-	2598	2625	14	41	50	180	2x3x3x8x2x10	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                              ||X||X||X|||||||X|X|||||||||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGGTG---------
R:         14   T033020103313112312320311101112021121200110..033231    41        
--
>736_3673_1462_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x8x8x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||X|||||||X||
T:               ----------------CAGaGGtGTGGTGTgGTGTCAGgGT---------
R:         17   T233020103031311231232031110111201112122010..231322    41        
--
>737_141_1832_F3	ENSMUST00000113126	-	2603	2620	20	37	50	180	18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    ||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCA-------------
R:         20   T231020103201030313132011110111101112113330...122..    37        
--
>737_566_4078_F3	ENSMUST00000113126	-	287	306	17	36	50	180	14x6	
G:        306    GATATCTTATACGACCCTGTGTTTGAGCGTCTTCTAAATCATTGTGTCTA    287       
                                 ||||||||||||||X|||||
T:               ----------------CTGTGTTTGAGCGTcTTCTA--------------
R:         17   T310302010303101222111100122331020223203010...332..    36        
--
>737_704_3491_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T021302012303131123123201111011120111213303...130..    38        
--
>737_1394_2448_F3	ENSMUST00000113126	-	2605	2623	17	35	50	170	6x13	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                                 ||||||X||||||||||||
T:               ----------------CAGAGGtGTGGTGTGGTGT---------------
R:         17   T133133133220003001222031110111101111033231...322..    35        
--
>737_1817_2290_F3	ENSMUST00000113126	+	2591	2622	9	40	50	172	3x1A3x3x2T12x6	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                         |||X |||X||X| ||||||||||||X|||||
T:               --------TACcAAGCaCCcTTACACCACACCACaCCTCT----------
R:          9   T302201020313102321032031110111101121022231...102..    40        
--
>737_1924_473_F3	ENSMUST00000113126	-	720	753	2	35	50	180	1x2x4x6x10x1x2x2x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                  |X|X|||X|||||X|||||||||XX|X|X|||||
T:               -CaGcAATaTGCAGgCAGTAGGCActGaCaTTGTC---------------
R:          2   T130201030313122312132031311112301120202001...130..    35        
--
>738_546_1507_F3	ENSMUST00000113126	-	770	790	8	28	50	170	1x7x13	
G:        790    TGCATGCAGTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    770       
                        |X||||||X||||||||||||
T:               -------AgTGGCGGaAAATCCGTGTCG----------------------
R:          8   T3031321201103300000320311123123021100002322332222.    28        
--
>738_1340_456_F3	ENSMUST00000113126	-	2594	2625	14	45	50	200	2x3x4x3x4x11x5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAATC    2594      
                              ||X||X|||X||X|||X||||||||||X||||
T:               -------------GAcAGaGGTgTGgTGTgGTGTCAGGGTgCTGG-----
R:         14   T1302010303131323123201011311120111212001032102111.    45        
--
>739_1545_3981_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T233020103030011211212031110111101110013323..00222.    35        
--
>739_2090_2657_F3	ENSMUST00000113126	-	2071	2099	9	37	50	150	1x3x5x1x2x11x2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||X|X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAAT-------------
R:          9   T001330311112022320311101112320031330300312..22220.    37        
--
>739_4217_3872_F3	ENSMUST00000113126	-	2224	2251	7	34	50	186	1x4C8x1x13	
G:       2251    GGGGAGCACGCACGCACGCACGCACCCACGCATGCCAATGAGCCCATTCA    2224      
                       |X||| ||||||||XX||||||||||||
T:               ------CaCGCCCGCACGCAcgCACCCACGCATG----------------
R:          7   T312330201330033113312231100113313121032102..03320.    34        
--
>740_359_3818_F3	ENSMUST00000113126	+	210	238	11	39	50	170	3x4x1x2x14x1x4	
G:        210    GTCAGAAGTTCAGGGAAGCAGTGGTGAGACGCAGGGCTACATATACGCCC    238       
                           |||X|||XX|X|||||||||||||XX|||
T:               ----------CAGgGAAgcAgTGGTGAGACGCAGggCTA-----------
R:         11   T3310030313112302030131101122213312213233020.231222    39        
--
>740_800_2693_F3	ENSMUST00000113126	-	2599	2625	15	41	50	170	x5x3x14x2x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               X||||X||X|||||||||||||X|X||
T:               --------------gACAGaGGtGTGGTGTGGTGTCaGgGT---------
R:         15   T2310201320320332112320311101111011122210131.331220    41        
--
>740_1341_2326_F3	ENSMUST00000113126	+	2593	2620	11	38	50	166	1x3x4x1x2T16	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                           |X||X|||XX| ||||||||||||||||
T:               ----------CcCAgCACccTTACACCACACCACACCT------------
R:         11   T2330201030030103112320311101111011110233301.011223    38        
--
>740_1700_743_F3	ENSMUST00000113126	+	2593	2619	11	37	50	190	5x3x1x3x15	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                           |||||X||XX||X||||||||||||||
T:               ----------CCCAGcACccTGaCACCACACCACACC-------------
R:         11   T2330201030000122112321311101111011110301103.001123    37        
--
>740_1715_5073_F3	ENSMUST00000113126	-	2598	2620	25	47	50	180	4x1x18	
G:       2620    GAAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAA    2598      
                                         ||||XX|||||||||||||||||
T:               ------------------------AGGTgtGGTGTGGTGTCAGGGTG---
R:         25   T3013312011233020103021311201231011110111212.011122    47        
--
>740_3032_1651_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	3x10x8	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||X|||||||||X|||||||
T:               ------------------AGGtGTGGTGTGGtGTCAGGG-----------
R:         19   T0202010303131023123203111011110211212002010.300332    39        
--
>740_3049_1334_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T0013303111120223203111011123200010301303121.230122    36        
--
>740_3572_3889_F3	ENSMUST00000113126	+	2603	2627	21	45	50	180	x15x5x5	
G:       2603    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                     X||||||||||||||X||||X||||
T:               --------------------tGACACCACACCACAcCTCTgTCTA-----
R:         21   T2310221002010303231331211101111011120222012.332212    45        
--
>741_1368_3325_F3	ENSMUST00000113126	+	2587	2615	5	33	50	176	x8x2x1x2G15	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                     X|||||||X|XX| |||||||||||||||
T:               ----aAGGTACCcAgcAGCCTGACACCACACCA-----------------
R:          5   T33233020131031311230212111011110131320.100..2323..    33        
--
>741_2692_2028_F3	ENSMUST00000113126	-	2590	2612	18	40	50	180	13x5x5	
G:       2612    CAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCCCTCAAAGA    2590      
                                  |||||||||||||X||||X||||
T:               -----------------TGTGGTGTCAGGGtGCTGgGTAC----------
R:         18   T01030301112312320311101112120001321301.010..2300..    40        
--
>742_106_4364_F3	ENSMUST00000113126	+	2594	2623	12	41	50	186	3x3T1x3x13x6	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                            |||X|| |X||X||||||||||||X|||||
T:               -----------CCAgCATCcTGaCACCACACCACAcCTCTG---------
R:         12   T2312221330010103132321111101111011120222102332130.    41        
--
>742_164_1979_F3	ENSMUST00000113126	+	2601	2626	19	44	50	172	1x2T17A4	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                   |X| ||||||||||||||||| ||||
T:               ------------------CcTTACACCACACCACACCTCAGTCT------
R:         19   T2310201030020103031320311101111011110221212222031.    44        
--
>742_822_2599_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	x3x3x14x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 X||X||X|||||||||||||X||||
T:               ----------------cAGaGGtGTGGTGTGGTGTCaGGGT---------
R:         17   T2330202330000103012320311101111011120200102230322.    41        
--
>742_946_2567_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	2x3x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               ||X||X||X|||||||||||||X|||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T2330201030030112212320311101111011120200003321311.    40        
--
>742_1144_2547_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030300112212320311101111011120330202223121.    36        
--
>742_1319_4951_F3	ENSMUST00000113126	-	2596	2623	18	45	50	186	14x2x5A3x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  ||||||||||||||X|X|||| |||X||
T:               -----------------CAGAGGTGTGGTGTgGtGTCAAGGTgCT-----
R:         18   T0233020103031311231222011110111202112102012323021.    45        
--
>742_1511_2951_F3	ENSMUST00000113126	+	2605	2631	23	49	50	176	16A1x1x3x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2631      
                                       |||||||||||||||| |XX||X||||
T:               ----------------------ACACCACACCACACCTATgtCTaCACC-
R:         23   T0230220032030300212320311101111011110233202201110.    49        
--
>742_1559_2270_F3	ENSMUST00000113126	-	2602	2623	16	37	50	160	3x3x8x8	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||X|||||||X|||||||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAG-------------
R:         16   T3100201033131123123203111011130111212323002011031.    37        
--
>742_1582_3240_F3	ENSMUST00000113126	+	2595	2621	13	39	50	210	7x3x13x4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                             |||||||X||X||||||||||||X|||
T:               ------------CAGCACCcTGaCACCACACCACAcCTC-----------
R:         13   T2330201030231123110321311101111011120220003331322.    39        
--
>742_2692_3144_F3	ENSMUST00000113126	-	2604	2629	11	36	50	166	x7T1x3x14	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           X|||||| |X||X|||||||||||||
T:               ----------tGTAGACTGaGGtGTGGTGTGGTGTC--------------
R:         11   T2330201030311322121320311101111011120233032103301.    36        
--
>743_434_4592_F3	ENSMUST00000113126	-	2601	2625	16	40	50	170	2x3x9x2x9	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                ||X||X||||||||X|X||||||||
T:               ---------------GAcAGaGGTGTGGTgTgGTGTCAGG----------
R:         16   T311302010303131123123201111012120111212031..12011.    40        
--
>743_453_2266_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T233020103003010201232031110111101112023220..22333.    36        
--
>743_1567_1087_F3	ENSMUST00000113126	+	2592	2621	10	39	50	186	5x1x3x1x2T17	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                          |||||XX||XX| |||||||||||||||||
T:               ---------ACCCAgcACccTTACACCACACCACACCTC-----------
R:         10   T233020203210010211232031110111101111022021..23021.    39        
--
>743_2071_3570_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T233020103031010211232031110111101112032231..32222.    36        
--
>743_2154_564_F3	ENSMUST00000113126	-	719	750	5	36	50	166	3A4x1x1x6x5x2x9	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     ||| ||||XXX|||||X||||X|X||||||||
T:               ----CAAAATGCaggCAGTAgGCACtGaCATTGTCA--------------
R:          5   T103221000313312312133031131111301121033302..23232.    36        
--
>743_4141_3094_F3	ENSMUST00000113126	-	90	116	10	36	50	170	2x4x3x2x2x14	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATTG    90        
                          ||X|||X||X|X|X|||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCG--------------
R:         10   T233201030313132312302231311112121123032303..20022.    36        
--
>744_144_2369_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	4x14	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||X|||||||||||||
T:               ----------------------ACACcACACCACACCTCT----------
R:         23   T3111020103030301211320311131111011110222202322310.    40        
--
>744_1791_141_F3	ENSMUST00000113126	+	2593	2622	11	40	50	180	x4x4x1x2x3x16	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           X|||X|||XX|X||X|||||||||||||||
T:               ----------cCCAgCACccTgACaCCACACCACACCTCT----------
R:         11   T2333201030000103112322210101111011110222203303202.    40        
--
>744_1939_2261_F3	ENSMUST00000113126	-	2604	2628	12	36	50	170	1x4x3x3x14	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                            |X|||X||X||X|||||||||||||
T:               -----------GtAGAcAGaGGtGTGGTGTGGTGTC--------------
R:         12   T2333203220232322212320311101111011120330003102320.    36        
--
>744_2195_1262_F3	ENSMUST00000113126	-	2604	2632	8	36	50	170	1x4x2x2x3x3x14	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                        |X|||X|X|X||X||X|||||||||||||
T:               -------TgGTGtAgAcAGaGGtGTGGTGTGGTGTC--------------
R:          8   T3330201030113332012320311101111011120323003320211.    36        
--
>744_3364_463_F3	ENSMUST00000113126	-	2602	2622	22	42	50	170	4x4x13	
G:       2622    AAAGAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAA    2602      
                                      ||||X|||X||||||||||||
T:               ---------------------AGAGgTGTgGTGTGGTGTCAG--------
R:         22   T1320322111300201033302222311120111101112123212223.    42        
--
>744_3443_73_F3	ENSMUST00000113126	+	2605	2625	23	43	50	170	2x11x8	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2625      
                                       ||X||||||||||X|||||||
T:               ----------------------ACaCCACACCACAcCTCTGTC-------
R:         23   T1112323302010300131320312101111011120222112300032.    43        
--
>745_1792_4574_F3	ENSMUST00000113126	-	2067	2099	9	41	50	176	1x8x1x2x13G2x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                         |X|||||||XX|X|||||||||||| ||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGGAAtCtGC---------
R:          9   T001330311112222320311101112320001020023133013102..    41        
--
>745_2118_4695_F3	ENSMUST00000113126	-	2590	2615	16	41	50	180	1x2x13x6x4	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTACCCCTCAAAG    2590      
                                |X|X||||||||||||X|||||X|||
T:               ---------------TgGtGTGGTGTCAGGGtGCTGGgTAC---------
R:         16   T221330312112312320311101112120031321021312121322..    41        
--
>745_2782_1011_F3	ENSMUST00000113126	-	723	750	5	32	50	180	4x6x11x1x1x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    723       
                     ||||X|||||X||||||||||XXX||||
T:               ----CAATaTGCAGgCAGTAGGCACtgaCATT------------------
R:          5   T321201030313122312132031110111300101003201110121..    32        
--
>746_2076_251_F3	ENSMUST00000113126	+	2601	2621	19	39	50	190	1x20	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                   |X|||||||||||||||||||
T:               ------------------CcTGACACCACACCACACCTC-----------
R:         19   T23102010303231121123212111011110111102202022101..2    39        
--
>746_3383_3656_F3	ENSMUST00000113126	-	2599	2625	15	41	50	190	5x1x2x14x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               |||||XX|X|||||||||||||X||||
T:               --------------GACAGagGtGTGGTGTGGTGTCaGGGT---------
R:         15   T33102210301101321123103111011110111202001023223..1    41        
--
>747_1266_4225_F3	ENSMUST00000113126	+	2596	2622	14	40	50	176	4x5x11G3x3	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                              ||||X||||X|||||||||| |||X||
T:               -------------AGCAcCCTGaCACCACACCAGACCtCT----------
R:         14   T23120103031313231200213111011110122101222021100.0.    40        
--
>747_2138_3102_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23102010303301021123203111011110111202333203321.1.    36        
--
>747_2713_2600_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x13x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAATC------------
R:          9   T00133031111202232031110111232000133032011332302.1.    38        
--
>749_1595_4260_F3	ENSMUST00000113126	-	1732	1758	17	43	50	150	2x1x6x2x10x1x5	
G:       1758    GTGCAGTTAGGTATCTCAATCGCACCCCTACCTCTAAACCTTCTTACGAA    1732      
                                 ||XX|||||X|X|||||||||XX||||
T:               ----------------CAatCGCACcCcTACCTCTAAacCTTC-------
R:         17   T02300200330301311132233111032310222302002023332..2    43        
--
>750_2184_2762_F3	ENSMUST00000113126	-	91	116	10	35	50	160	2x4x3x2x2x13	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                          ||X|||X||X|X|X||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTC---------------
R:         10   T200201030313132312302231311112121121020333202302.2    35        
--
>750_2563_2953_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T001302010303131123123201111011120111213303230320.0    38        
--
>750_2771_3984_F3	ENSMUST00000113126	-	916	961	5	50	50	196	2x1x3G2x5x1x1x2x5x4x1x6x12	
G:        961    CCATAAGATCTCCTTCATGGTGACCTTTGTGTTGTCTACTTGGATAAGGG    916       
                     ||XX|| ||X||||XXX|X||||X|||XX|||||X|||||||||||
T:               ----AAgaTCGCCtTCATggtGaCCTTtGTGttGTCTAcTTGGATAAGGG
R:          5   T223220103233000213212131020111103112230201023302.0    50        
--
>750_2993_3419_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T233020103003010311232031110111101112022300320233.3    36        
--
>750_3550_31_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T023302010303133123123201111011120111213313220211.1    38        
--
>750_3667_2919_F3	ENSMUST00000113126	+	2605	2627	23	45	50	170	13x3x4x3	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2627      
                                       |||||||||||||X||X|||X||
T:               ----------------------ACACCACACCACAcCTcTGTcTA-----
R:         23   T233020103200033321132031110111101112023211323321.3    45        
--
>751_974_4462_F3	ENSMUST00000113126	-	2602	2625	16	39	50	200	2x14x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                ||X|||||||||||||X|||||||
T:               ---------------GAcAGAGGTGTGGTGTgGTGTCAG-----------
R:         16   T3133020103031331231222011110111201112121323332023.    39        
--
>751_1297_4409_F3	ENSMUST00000113126	-	2601	2620	19	38	50	160	3x12x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |||X|||||||||||X||||
T:               ------------------AGGtGTGGTGTGGTGtCAGG------------
R:         19   T1302010303131023123203111011110112212033333332302.    38        
--
>751_1481_3391_F3	ENSMUST00000113126	+	2593	2617	11	35	50	170	1x7x1x2x14	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2617      
                           |X||||||XX|X|||||||||||||
T:               ----------CcCAGCACccTgACACCACACCACA---------------
R:         11   T2330201030010123112320211101111011100320002332332.    35        
--
>751_1674_2486_F3	ENSMUST00000113126	+	2591	2623	9	41	50	176	3x1x5x2x2T2x10x7	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                         |||XX||||X|X| ||X|||||||||X||||||
T:               --------TACccAGCAcCcTTACaCCACACCACaCCTCTG---------
R:          9   T1010210303131123120320310101111011010222103003200.    41        
--
>751_1674_2563_F3	ENSMUST00000113126	+	2605	2630	23	48	50	180	13x2x3x1x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2630      
                                       |||||||||||||X|X||XX||||||
T:               ----------------------ACACCACACCACAcCtCTgtCTACAC--
R:         23   T2330201032000310131320311101111011120322202231113.    48        
--
>751_1707_3964_F3	ENSMUST00000113126	-	2234	2266	4	36	50	170	3x4x2x3x1x4x10x1x5	
G:       2266    GCTGGCTACGCACGCACGCACGCACGCACGCACGCACCACTGGATTCCAA    2234      
                    |||X|||X|X||XX|||X|||||||||XX||||
T:               ---GGCtACGcAcGCacGCAcGCACGCACGcaCGCA--------------
R:          4   T2201030313112330233103311331130013310113021103202.    36        
--
>751_3131_2463_F3	ENSMUST00000113126	-	2597	2623	18	44	50	170	14x2x2x2x2x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                  ||||||||||||||X|X|X|X|X||||
T:               -----------------CAGAGGTGTGGTGTgGtGtCaGgGTGC------
R:         18   T0233020103031311231222011110111202132223011332212.    44        
--
>751_3420_1040_F3	ENSMUST00000113126	-	2601	2627	13	39	50	170	2x2x3x3x13x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                             ||X|X||X||X||||||||||||X|||
T:               ------------TAgAcAGaGGtGTGGTGTGGTGTcAGG-----------
R:         13   T2330201033230302012320311101111011111202132232111.    39        
--
>751_3462_2706_F3	ENSMUST00000113126	-	2593	2620	20	47	50	166	3x13x1x5A2x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                    |||X||||||||||||XX|||| ||X||
T:               -------------------AGGtGTGGTGTGGTGTcaGGGTACTgGG---
R:         20   T2330201030130030012320311101111011100200131220022.    47        
--
>752_134_2824_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T233020103203010311232231110111101111022030..2332..    39        
--
>752_1166_1856_F3	ENSMUST00000113126	+	2592	2621	10	39	50	172	5x3T1x2T12x5	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                          |||||X|| |X| ||||||||||||X||||
T:               ---------ACCCAgCATCcTTACACCACACCACaCCTC-----------
R:         10   T231020203010010313232031110111101121022330..2010..    39        
--
>752_1302_2567_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	2x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  ||X||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTC--------------
R:         18   T010002133020110232232011110111101112022020..0303..    36        
--
>752_1465_759_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	12x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||X|||||
T:               ----------------------ACACCACACCACaCCTCT----------
R:         23   T231020103000033203032031110111101121022200..3223..    40        
--
>752_1880_1580_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T233020103002010211232031110111101111010000..0233..    35        
--
>752_2050_2068_F3	ENSMUST00000113126	-	2315	2338	19	42	50	166	12x6x2T3	
G:       2338    CTCATCGGGCTCATCTGTACACTGTCACACTATATTACCAGCGAGCCGAA    2315      
                                   ||||||||||||X|||||X| |||
T:               ------------------ACACTGTCACACtATATTaCTAGC--------
R:         19   T130201030313102312311121121111033330012323..2120..    42        
--
>752_2283_2318_F3	ENSMUST00000113126	-	2600	2625	17	42	50	180	2x3x3x13x5	
G:       2625    AGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAA    2600      
                                 ||X||X||X||||||||||||X||||
T:               ----------------GAcAGaGGtGTGGTGTGGTGTcAGGG--------
R:         17   T333230201330313102312320311101111011101200..3023..    42        
--
>752_3750_631_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T001330311112222320111101112320001120011202..1022..    34        
--
>752_4236_111_F3	ENSMUST00000113126	-	2596	2624	20	48	50	170	3x3x2x2x16x3	
G:       2624    AAAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAA    2596      
                                    |||X||X|X|X|||||||||||||||X||
T:               -------------------ACAgAGgTgTgGTGTGGTGTCAGGGTgCT--
R:         20   T210301030003200102031132231212011110111212..2232..    48        
--
>753_520_2697_F3	ENSMUST00000113126	-	2124	2140	19	35	50	150	2x15	
G:       2140    GGTCTGACCTCCAAAGAGATGGCACAGTTAAACTAAAATGCTGCTCATGG    2124      
                                   ||X||||||||||||||
T:               ------------------ATgGCACAGTTAAACTA---------------
R:         19   T2311230213300130103330311121030012333230220.12222.    35        
--
>753_1636_4305_F3	ENSMUST00000113126	-	2601	2627	13	39	50	190	7x3x12x2x3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                             |||||||X||X|||||||||||X|X||
T:               ------------TAGACAGaGGtGTGGTGTGGTGtCaGG-----------
R:         13   T2310201030000322112320311101111011220201103.20212.    39        
--
>753_1676_4748_F3	ENSMUST00000113126	+	2601	2623	19	41	50	156	1x2T13x6	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                   |X| |||||||||||||X|||||
T:               ------------------CcTTACACCACACCACAcCTCTG---------
R:         19   T2310221030030101232320311101111011120222132.01222.    41        
--
>753_2117_653_F3	ENSMUST00000113126	-	2606	2627	13	34	50	160	1x6x3x12	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                             |X|||||X||X|||||||||||
T:               ------------TaGACAGaGGtGTGGTGTGGTG----------------
R:         13   T2330201030310122112320311101111011222221003.21222.    34        
--
>753_2513_2045_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x12x2x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X|||||||||||X|X||||||
T:               ---------------GAcAGAGGTGTGGTgTgGTGTCA------------
R:         16   T0233020103031331231222011110131201112132222.20203.    38        
--
>753_3263_619_F3	ENSMUST00000113126	-	2071	2089	19	37	50	150	2x9x8	
G:       2089    TTCTCCCTTATCCAAGTACAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                                   ||X||||||||X|||||||
T:               ------------------CAaCCACAGCTtTTGTAAT-------------
R:         19   T0013303111123123203111011123230011303022103.23212.    37        
--
>754_283_3633_F3	ENSMUST00000113126	+	2601	2623	19	41	50	176	1x2T19	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                   |X| |||||||||||||||||||
T:               ------------------CcTTACACCACACCACACCTCTG---------
R:         19   T2310201032030100002320311101111011110222103..2212.    41        
--
>754_435_2223_F3	ENSMUST00000113126	-	2601	2625	15	39	50	170	2x3x3x14x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                               ||X||X||X|||||||||||||X||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCaGG-----------
R:         15   T2310201030010112212320311101111011120202003..2331.    39        
--
>754_1697_3714_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T0233020103031311231232011110111201112112213..2033.    38        
--
>754_2000_322_F3	ENSMUST00000113126	-	2605	2620	20	35	50	160	16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                                    ||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGT---------------
R:         20   T2330201030330112132320111101111011130122302..3112.    35        
--
>754_2000_2260_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x3x8x10	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||X|||||||X|||||||||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGGG---------
R:         16   T1333020103031331201232031110111201112120022..2210.    41        
--
>754_2573_1770_F3	ENSMUST00000113126	-	2593	2623	16	46	50	170	3x3x10x6x2x2x5	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAATC    2593      
                                |||X||X|||||||||X|||||X|X|X||||
T:               ---------------CAGaGGtGTGGTGTGGtGTCAGgGtGcTGGG----
R:         16   T1032010303131123123203111011110211212103102..1202.    46        
--
>754_2777_3267_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T2330201033130333212320311101111011110223231..3133.    39        
--
>754_3885_1923_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T2030201030310132112320311101111011133222303..0123.    35        
--
>755_503_925_F3	ENSMUST00000113126	-	2590	2618	20	48	50	170	3x3x12x4x4x3	
G:       2618    ATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGGTACCC    2590      
                                    |||X||X|||||||||||X|||X|||X||
T:               -------------------GTGtGGtGTGGTGTCAGGgTGCtGGGtAC--
R:         20   T320033020103030300331131031110111212031133..33312.    48        
--
>755_1461_4442_F3	ENSMUST00000113126	+	2598	2619	16	37	50	180	3x1x18	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                                |||XX|||||||||||||||||
T:               ---------------CACccTGACACCACACCACACC-------------
R:         16   T131023103003010011232121110111101111032020..22222.    37        
--
>755_2027_2556_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T023302010303131123123201111011120111212302..32113.    39        
--
>755_2485_1858_F3	ENSMUST00000113126	-	2599	2625	16	42	50	170	2x3x3x8x8x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||X|||||||X|||||||X||
T:               ---------------GAcAGaGGtGTGGTGTgGTGTCAGgGT--------
R:         16   T313302010303133123123203111011120111212301..33033.    42        
--
>756_2914_4236_F3	ENSMUST00000113126	+	707	735	13	41	50	170	4x2x3x1x1x10x8	
G:        707    TGAAGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGCCTACTGCCTGC    735       
                             ||||X|X||XXX|||||||||X|||||||
T:               ------------GCCGaAgCTcaaTGACAATGTcAGTGCCT---------
R:         13   T102312320201030310132331312110311112113021..2020..    41        
--
>757_1792_688_F3	ENSMUST00000113126	+	2593	2621	11	39	50	176	6x2x1x2T12x5	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                           ||||||X|XX| ||||||||||||X||||
T:               ----------CCCAGCaCccTTACACCACACCACaCCTC-----------
R:         11   T301020103000012301232031110111101101022030.322300.    39        
--
>757_2201_225_F3	ENSMUST00000113126	-	730	754	1	25	50	170	x4x4x6x11	
G:        754    TCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                 X|||X|||X|||||X||||||||||
T:               tCAGcAATaTGCAGgCAGTAGGCAC-------------------------
R:          1   T121201030313122312132031130113101022012110.222001.    25        
--
>757_4051_3366_F3	ENSMUST00000113126	-	2599	2623	16	40	50	170	3x3x8x2x9	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                |||X||X|||||||X|X||||||||
T:               ---------------CAGaGGtGTGGTGTgGtGTCAGGGT----------
R:         16   T121201030313112312320311101112021121200131.332303.    40        
--
>758_2566_3814_F3	ENSMUST00000113126	+	2593	2622	11	40	50	200	4x4x1x2x13x6	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           ||||X|||XX|X||||||||||||X|||||
T:               ----------CCCAgCACccTgACACCACACCACaCCTCT----------
R:         11   T2330201030000113112320211101111011310222211.30222.    40        
--
>758_2581_3263_F3	ENSMUST00000113126	+	2594	2621	12	39	50	180	3x4x4x11x2x4	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            |||X|||X|||X||||||||||X|X|||
T:               -----------CCAgCACcCTGaCACCACACCAcAcCTC-----------
R:         12   T2330201030330103112021011101111010120220332.22233.    39        
--
>758_2897_115_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T2310201031330100212320311101111011120222100.31322.    41        
--
>758_3457_3160_F3	ENSMUST00000113126	+	918	943	16	41	50	180	2x5x1x5x13	
G:        918    GCTCATGGATTCTCCCTTATCCAAGTAGACAACACAAAGGTCACCATGAA    943       
                                ||X||||XX||||X||||||||||||
T:               ---------------CTtATCCaaGTAGaCAACACAAAGGT---------
R:         16   T2020103331010231213320312132111011110020102.13233.    41        
--
>758_4158_2208_F3	ENSMUST00000113126	-	730	750	5	25	50	170	4x6x11	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||X|||||X||||||||||
T:               ----CAATaTGCAGgCAGTAGGCAC-------------------------
R:          5   T1302210303131223121320311101121011220003112.22231.    25        
--
>760_612_797_F3	ENSMUST00000113126	-	1091	1122	2	33	50	172	1x5x2A2C3x9x8	
G:       1122    TCCCTTGAACTGTTCTCGCGAACCAGGCAGAACGAACAAAAGTGTACATT    1091      
                  |X||||X| || |||X||||||||X|||||||
T:               -CcCTTGaAATGCTCTcGCGAACCAgGCAGAAC-----------------
R:          2   T20302010003132223333201011031220131130.12112.30313    33        
--
>760_3233_2983_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111232232031110111232300113000.21133.02023    36        
--
>763_2154_858_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23102013300303320123203111011110111203.33332.22320    36        
--
>763_3331_4737_F3	ENSMUST00000113126	-	2600	2627	14	41	50	190	2x2x3x11x10	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X|X||X||||||||||X|||||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCAGGG---------
R:         14   T02330201030323312312320111101112011121.20323.03132    41        
--
>763_4174_3566_F3	ENSMUST00000113126	-	2597	2626	14	43	50	210	1x8x13x5x3	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                              |X|||||||X||||||||||||X||||X||
T:               -------------AgACAGAGGtGTGGTGTGGTGTcAGGGtGC-------
R:         14   T23302020300301321122203111011110111012.00133.31310    43        
--
>766_1963_1663_F3	ENSMUST00000113126	+	2599	2620	17	38	50	160	2x1x16x3	
G:       2599    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                 ||XX|||||||||||||||X||
T:               ----------------ACccTGACACCACACCACAcCT------------
R:         17   T20102010303102312113212111011110111202.220.1.01020    38        
--
>767_3017_3507_F3	ENSMUST00000113126	+	1781	1800	18	37	50	160	6x10x4	
G:       1781    AAACTTGGCAATGGTTCTAAGTAGCAATGCCCAGGAGCCAGGCCACCTCC    1800      
                                  ||||||X|||||||||X|||
T:               -----------------TAAGTAgCAATGCCCAgGAG-------------
R:         18   T23203222333000230030213131031300130222...213..2202    37        
--
>769_3064_3245_F3	ENSMUST00000113126	-	2596	2626	14	44	50	180	6x3x11x2x3x6	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                              ||||||X||X||||||||||X|X||X|||||
T:               -------------AGACAGaGGtGTGGTGTGGTgTcAGgGTGCT------
R:         14   T10302010303301221123203111011110101112...132..0002    44        
--
>770_2545_3308_F3	ENSMUST00000113126	+	2907	2925	4	22	50	150	3x7x9	
G:       2907    GAATTTTTAGCAATTTTATATTTAGATATCTTTGAAATTGTAAATGACTA    2925      
                    |||X||||||X||||||||
T:               ---TTTtTAGCAAtTTTATATT----------------------------
R:          4   T01.000103231000003333031210111100.3202.1.123..2323    22        
--
>771_2399_120_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	14x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    ||||||||||||||X||||
T:               -------------------AGGTGTGGTGTGGTgTCAG------------
R:         20   T01.010133020111122232011110111101012122.0232.12103    38        
--
>776_3794_2568_F3	ENSMUST00000113126	-	1821	1841	10	30	50	170	4x13x4	
G:       1841    ACAGGATATCACGGCTGAGCAGCACTCAGCGTCATTCAAAGTCAGCATGA    1821      
                          ||||X||||||||||||X|||
T:               ---------CACGgCTGAGCAGCACTcAGC--------------------
R:         10   T22101010301131321223123112012321113330021023..2023    30        
--
>776_3800_3101_F3	ENSMUST00000113126	-	2593	2629	11	47	50	210	4x2x6x10x2x3x3x7	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                           ||||X|X|||||X|||||||||X|X||X||X||||||
T:               ----------TGTAgAcAGAGGtGTGGTGTGGtGtCAgGGtGCTGGG---
R:         11   T23302011303113022122203111011110312210000132..0302    47        
--
>778_2007_353_F3	ENSMUST00000113126	-	730	750	5	25	50	170	3x10x8	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     |||X|||||||||X|||||||
T:               ----CAAtATGCAGGCAgTAGGCAC-------------------------
R:          5   T20.201003313120313132031132111102.0203312023..1231    25        
--
>778_2759_130_F3	ENSMUST00000113126	-	1702	1721	14	33	50	160	7x2x11	
G:       1721    CTGTTACGAATCACAGCAGCCTGTGCCTGCGGGGGATTAAGCAGAAACCC    1702      
                              |||||||X|X||||||||||
T:               -------------CAGCAGCcTgTGCCTGCGGG-----------------
R:         14   T33.022103002311231231221130213300.2100012011..1020    33        
--
>779_212_3195_F3	ENSMUST00000113126	-	2604	2625	16	37	50	180	5x11x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                |||||X||||||||||X|||||
T:               ---------------GACAGaGGTGTGGTGTgGTGTC-------------
R:         16   T02.30201230310312112320111101112011122132213.22003    37        
--
>779_263_957_F3	ENSMUST00000113126	-	288	307	18	37	50	160	10x7x3	
G:        307    CCGATATCTTATACGACGCTGTGTTTGAGCGTCTTCTAAATCATTGTGTC    288       
                                  ||||||||||X||||||X||
T:               -----------------GCTGTGTTTGaGCGTCTtCT-------------
R:         18   T23.32213320213031332111100112331222220133231.21000    37        
--
>779_4039_1250_F3	ENSMUST00000113126	+	2591	2623	9	41	50	170	1x5x2x2x1x2x14x2x4	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                         |X||||X|X|XX|X|||||||||||||X|X|||
T:               --------TaCCCAgCaCccTgACACCACACCACAcCtCTG---------
R:          9   T31.02010301001332123202111011110111301221031.32123    41        
--
>783_229_1939_F3	ENSMUST00000113126	+	547	573	12	38	50	170	10x6x3x1x4x3	
G:        547    TGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAAGATCGACGTCT    573       
                            ||||||||||X|||||X||XX|||X||
T:               -----------GTCATGTGGGtACAACtGCaaCTAaGA------------
R:         12   T13.3010.0313121311100331101013221232223033.1.21230    38        
--
>783_2478_2813_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23.0201.3013011311232031110111101112023330.1.30232    36        
--
>784_220_2920_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2112201.0033331211232021110111101112000210.3.20000    36        
--
>784_1212_4981_F3	ENSMUST00000113126	-	77	115	12	50	50	162	1x2x2x2x3x7x11G1C5x3	
G:        115    GCTCTGTATTTTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGA    77        
                            |X|X|X|X||X||||||X|||||||||| | |||||X||
T:               -----------TcAtCaCtGGtCACGTGtGACTGTCGAAGACGAGCTaGA
R:         12   T2222202.3030311201110221131131212112320221.3.22222    50        
--
>784_1858_1224_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	2x5x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X||||X||X|||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T2330201.3003030211232031110111101112003220.1.30332    36        
--
>784_2888_3266_F3	ENSMUST00000113126	+	2225	2248	19	42	50	180	3x10x8x3	
G:       2225    TGTGCCCAGCGTAAGTGCATGCGTGGGTGCGTGCGTGCGTGCGTGCGTGC    2248      
                                   |||X|||||||||X|||||||X||
T:               ------------------ATGcGTGGGTGCGtGCGTGCGtGC--------
R:         19   T3320201.3013013332231231100113301331133313.1.22220    42        
--
>785_189_3133_F3	ENSMUST00000113126	-	1210	1237	13	40	50	190	1x3x2x11x11	
G:       1237    GGCAATGGTTCTGTGAATCGCAGTCTGTGGATCATGCTGACTCCTGGAGG    1210      
                             |X||X|X||||||||||X||||||||||
T:               ------------GtGAaTcGCAGTCTGTGgATCATGCTGA----------
R:         13   T23.2203.3031021213133121221111232.01321222.2..0203    40        
--
>785_1117_1534_F3	ENSMUST00000113126	+	1386	1407	7	28	50	156	4x2T15	
G:       1386    GAGAAGAGCCCCAGTCACGCGGTGTTTAAGCTCACGTATCTAAGCAGCCA    1407      
                       ||||X| |||||||||||||||
T:               ------AGCCcCTGTCACGCGGTGTTTA----------------------
R:          7   T32.0201.2030211211333011100331202.22002230.3..0033    28        
--
>785_2100_287_F3	ENSMUST00000113126	-	2591	2615	16	40	50	180	1x16x3x5	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                |X|||||||||||||||X||X||||
T:               ---------------TgGTGTGGTGTCAGGGTgCTgGGTA----------
R:         16   T00.3303.1112132320111101112120010.22001303.0..1311    40        
--
>787_4091_3578_F3	ENSMUST00000113126	+	1306	1329	26	49	50	140	1x15x2x6	
G:       1306    GACCCTGTTACGAATCAGAAAGCCAGCACTAAGTTTTGGATTAAGCAGAA    1329      
                                          |X||||||||||||||X|X|||||
T:               -------------------------GcACTAAGTTTTGGATtAaGCAGA-
R:         26   T0300201.30010333231320.1110.12302100010.3233..1223    49        
--
>789_163_1977_F3	ENSMUST00000113126	+	2596	2620	9	33	50	176	1x5x4T14	
G:       2596    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2620      
                         |X||||X||| ||||||||||||||
T:               --------AgCACCcTGATACCACACCACACCT-----------------
R:          9   T01.0201.3031101212331011110111102022001300.0.12311    33        
--
>789_1684_1340_F3	ENSMUST00000113126	-	349	371	9	31	50	170	8x7x3x5	
G:        371    CTGCAGACCCACTGAATATTTTTGCATTTGAAGCATCCTTGGGCCAGGGC    349       
                         ||||||||X||||||X||X||||
T:               --------CCACTGAAtATTTTTgCAtTTGA-------------------
R:          9   T13.3301.2011212013300003310001201322020100.2.20103    31        
--
>789_3345_5042_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	3x5x1x2x13x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X||||||||||||X||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:         10   T00.3303.1112122320111101112320001330010102.1.21030    36        
--
>792_2175_4963_F3	ENSMUST00000113126	-	2596	2615	19	38	50	180	16x4	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTAAAAATCCCTCA    2596      
                                   ||||||||||||||||X|||
T:               ------------------TGGTGTGGTGTCAGGGtGCT------------
R:         19   T23.0201.0313112312310111101112120021320132.3.01001    38        
--
>792_4224_4668_F3	ENSMUST00000113126	-	63	90	5	32	50	176	1x2x17x2A5	
G:         90    TTAGGAATATGAGCTAGAATGATAGTTGGATTTGGTCATTAAATCTTGTC    63        
                     |X|X||||||||||||||||X| |||||
T:               ----GaAtATGAGCTAGAATGATAgTAGGATT------------------
R:          5   T22.1030.1312232322031233313202300222030300.3.32311    32        
--
>793_327_3706_F3	ENSMUST00000113126	-	1389	1406	16	33	50	160	7x11	
G:       1406    GAAATCAGGGCAGCAAAACACCGCGTGACTGGGCTGGTGCCACAGCCCAG    1389      
                                |||||||X||||||||||
T:               ---------------AAACACCgCGTGACTGGG-----------------
R:         16   T2023100.0233.20100111023311212100.23212.2230..0112    33        
--
>793_2453_3175_F3	ENSMUST00000113126	-	2215	2229	17	31	50	130	2x13	
G:       2229    ACGGATTTTCCGCCACCGCATGCACTTACGCCCATTCATAAGTTTGGCTT    2215      
                                 ||X||||||||||||
T:               ----------------CGcATGCACTTACGC-------------------
R:         17   T2300201.3031.33133213131120313301.31020.3332..0212    31        
--
>795_3294_4625_F3	ENSMUST00000113126	-	2604	2622	19	37	50	170	12x7	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                   ||||||||||||X||||||
T:               ------------------AGAGGTGTGGTGtGGTGTC-------------
R:         19   T0233020.0303.0232332220111101131011122232333.13210    37        
--
>796_2689_2654_F3	ENSMUST00000113126	-	2595	2627	12	44	50	180	x4x3x3x8x2x6x7	
G:       2627    AATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                            X|||X||X||X|||||||X|X|||||X||||||
T:               -----------tAGAcAGaGGtGTGGTGTgGtGTCAGgGTGCTG------
R:         12   T11.2010.0313.0231232031110111202112123011321100.03    44        
--
>797_925_3862_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	12x2x7	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||||||||||||X|X||||||
T:               -------------------CTGACACCACACcAcACCTCT----------
R:         20   T20.2302.203000011333212111011111131102222330020.01    40        
--
>797_2659_4291_F3	ENSMUST00000113126	-	2073	2098	10	35	50	186	3x9x8A5	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                          |||X||||||||X||||||| |||||
T:               ---------TGAgAGCTCCAAcCACAGCTATTGTA---------------
R:         10   T00.3303.111212232201020111232330113223023022313.01    35        
--
>799_1964_228_F3	ENSMUST00000113126	-	2586	2614	22	50	50	170	x13x6x2x2x6	
G:       2614    TCTAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTACCTTG    2586      
                                      X||||||||||||X|||||X|X|X|||||
T:               ---------------------gGTGTGGTGTCAGgGTGCTgGgTaCCTTG
R:         22   T02.3020.2303.0112232320111101112121011320031..1201    50        
--
>799_2091_1941_F3	ENSMUST00000113126	-	1599	1621	16	38	50	156	x10x7A5	
G:       1621    AAGAGCCCCAGTCACCAGTGTCACTGCTGCCCTGATTTAAGCAGCCATGA    1599      
                                X|||||||||X|||||| |||||
T:               ---------------cAGTGTCACTgCTGCCCAGATTT------------
R:         16   T31.2010.0313.2231211121122321300122300131313..1012    38        
--
>799_2681_897_F3	ENSMUST00000113126	-	2072	2098	10	36	50	160	3x6x2x9x4x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X|||||X|X||||||||X|||X||
T:               ---------TGAgAGCTCcAaCCACAGCTtTTGtAA--------------
R:         10   T00.3303.1112.2232211110111232300103002330102..2033    36        
--
>800_3463_499_F3	ENSMUST00000113126	-	2596	2620	18	42	50	180	3x10x9x3	
G:       2620    ATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATCC    2596      
                                  |||X|||||||||X||||||||X||
T:               -----------------AGGtGTGGTGTGGtGTCAGGGTgCT--------
R:         18   T20.2103.0111.031232031110111103112120.0232.1.00322    42        
--
>800_3821_4718_F3	ENSMUST00000113126	+	2319	2341	18	40	50	146	x8x9C5	
G:       2319    CTGAGAGACAGGTGCTGGTAATATAGTGTGACAGTGTCTCCAAGTGGTGC    2341      
                                  X|||||||X|||||||| |||||
T:               -----------------gTAATATAgTGTGACAGCGTCTC----------
R:         18   T33.3233.3313.201011303333311112112331.2222.2.22012    40        
--
>800_4208_1773_F3	ENSMUST00000113126	+	1342	1375	17	50	50	182	12x2x5G5G5x3	
G:       1342    CAGAAACCCATCTCAATCGATTGTGACCTGCTCTGTGCCTGTGACCTTGC    1375      
                                 ||||||||||||X|X|||| ||||| |||||X||
T:               ----------------TCGATTGTGACCtGcTCTGGGCCTGGGACCTtGC
R:         17   T02.3020.3303.031223230111210111222100.3210.2.32313    50        
--
>801_3057_1334_F3	ENSMUST00000113126	+	817	842	12	37	50	156	6x1A1x4x13	
G:        817    CATTCATAAGTTTGGCTTCAGTACTTTGGCCCTGGTTGAAAAATACTCCT    842       
                            ||||||X |X|||X||||||||||||
T:               -----------TTGGCTtAAgTACtTTGGCCCTGGTT-------------
R:         12   T1220020.0303.10322301131100103002101030.20.2..2102    37        
--
>803_1865_1138_F3	ENSMUST00000113126	+	2591	2614	9	32	50	170	3x3x5x13	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2614      
                         |||X||X||||X||||||||||||
T:               --------TACcCAgCACCcTGACACCACACC------------------
R:          9   T0222010.0313.033110221211101111030220.2231.3.00.30    32        
--
>804_4241_561_F3	ENSMUST00000113126	+	175	193	22	40	50	150	1x7x11	
G:        175    TTGACCTAGAGAAGACTCATCCTCCGTCAGTGCCTGGAGACAGTGGGTCA    193       
                                      |X||||||X||||||||||
T:               ---------------------CtCCGTCAgTGCCTGGAGA----------
R:         22   T12.2330.0103.3031033123203121011302102222001.22.11    40        
--
>805_4106_1066_F3	ENSMUST00000113126	-	2071	2098	10	37	50	160	3x5x3x9x2x6	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                          |||X||||X||X||||||||X|X|||||
T:               ---------TGAgAGCTcCAaCCACAGCTtTtGTAAT-------------
R:         10   T00.3303.1112.2232.111101112323011130333103.2.31101    37        
--
>807_1173_4926_F3	ENSMUST00000113126	-	2595	2620	21	46	50	176	3x8x10C4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     |||X|||||||X||||||||| ||||
T:               --------------------AGGtGTGGTGTgGTGTCAGGGCGCTG----
R:         21   T3133020.2303202123023202111011120111212003.2212.20    46        
--
>807_2437_1922_F3	ENSMUST00000113126	+	2953	2981	4	32	50	160	6x2x11x2x3x1x4	
G:       2953    ACTAATTTGGTCATTAAATCTTGTCACATATTCAATATTAAAATACTAAA    2981      
                    ||||||X|X||||||||||X|X||XX|||
T:               ---AATTTGgTcATTAAATCTTgTcACatATT------------------
R:          4   T1121030.1311130300322031111223303122011220.0112.33    32        
--
>807_2618_277_F3	ENSMUST00000113126	-	1637	1659	18	40	50	176	6T1x15	
G:       1659    CGATTGTGACCTGCTCTCTTGCAGGCCACCTGGGCTGTGGAAGAGCCCCA    1637      
                                  |||||| |X||||||||||||||
T:               -----------------CTTGCATGcCACCTGGGCTGTGG----------
R:         18   T3303302.1200230312201313100110210032111001.1230.20    40        
--
>808_1414_4290_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T232220330000.3031013201111011110111201231030310312    36        
--
>808_3330_3172_F3	ENSMUST00000113126	-	2602	2625	16	39	50	166	x16C2x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                X||||||||||||||| ||X||||
T:               ---------------gACAGAGGTGTGGTGTCGTgTCAG-----------
R:         16   T021302021303.0212112220111101112312121233003223003    39        
--
>809_1912_3478_F3	ENSMUST00000113126	-	2596	2623	20	47	50	176	3x3x12x6C3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                    |||X||X|||||||||||X||||| |||
T:               -------------------CAGaGGtGTGGTGTGGTGtCAGGGCGCT---
R:         20   T122233020103331312331232031110111101102120.0332022    47        
--
>810_2830_3825_F3	ENSMUST00000113126	+	2591	2623	9	41	50	188	3G5T1x2T2x17	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                         ||| ||||| |X| ||X||||||||||||||||
T:               --------TACGCAGCATCcTTACaCCACACCACACCTCTG---------
R:          9   T231221320313312313232031310111101111022213.0.00132    41        
--
>810_3435_3476_F3	ENSMUST00000113126	-	2072	2098	10	36	50	176	x8A2x7x9	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          X||||||| ||X||||||X||||||||
T:               ---------tGAGAGCTACAaCCACAGcTTTTGTAA--------------
R:         10   T000330311112222323111101112220001130032110.1.33122    36        
--
>811_309_371_F3	ENSMUST00000113126	-	2072	2098	10	36	50	190	3x17x2x5	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||||||||||||||X|X||||
T:               ---------TGAgAGCTCCAACCACAGCTtTtGTAA--------------
R:         10   T0003303.1112.0232.1101011123220111300.1000.3.03.23    36        
--
>811_1711_2328_F3	ENSMUST00000113126	+	2591	2615	9	33	50	150	3x1x15x2x4	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                         |||XX||||||||||||||X|X|||
T:               --------TACccAGCACCCTGACACCaCaCCA-----------------
R:          9   T2300210.0313.1231.0021211102121010130.0021.0.33.13    33        
--
>812_3416_1511_F3	ENSMUST00000113126	-	2604	2625	14	35	50	160	2x3x3x14	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAATC    2604      
                              ||X||X||X|||||||||||||
T:               -------------GAcAGaGGtGTGGTGTGGTGTC---------------
R:         14   T2332201.0313.1231232031110111101112221033302.10331    35        
--
>813_4183_1400_F3	ENSMUST00000113126	-	2604	2629	11	36	50	180	2x1x3x3x17	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||XX||X||X||||||||||||||||
T:               ----------TGtaGAcAGaGGTGTGGTGTGGTGTC--------------
R:         11   T13.02010300101223123201111011110111223.003.3.20310    36        
--
>814_669_2808_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	8x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     ||||||||X|||||||||
T:               --------------------AGGTGTGGtGTGGTGTCA------------
R:         21   T02.30201230320112332320111102111011121.030.1.01003    38        
--
>815_329_2109_F3	ENSMUST00000113126	+	2223	2242	17	36	50	160	4x7x9	
G:       2223    TGTGCCCAGCGTAAGTGCATGCGTGGGTGCGTGCGTGCGTGCGTGCGTGC    2242      
                                 ||||X||||||X||||||||
T:               ----------------GCATgCGTGGGtGCGTGCGT--------------
R:         17   T13.23013300001123313233110031331133120033333221023    36        
--
>815_1045_2074_F3	ENSMUST00000113126	-	2606	2625	15	34	50	180	5x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||||||||||||||
T:               --------------GACAGaGGTGTGGTGTGGTG----------------
R:         15   T23.22010303101021123201111011110110201133023002003    34        
--
>815_1092_3329_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T31.30202030310112132320111101112011121223022313231    39        
--
>815_1135_2430_F3	ENSMUST00000113126	-	2595	2624	16	45	50	180	4x3x12x2x2x3x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                ||||X||X|||||||||||X|X|X||X|||
T:               ---------------ACAGaGGtGTGGTGTGGTGtCaGgGTgCTG-----
R:         16   T23.02013322311031123203111011110113202101232121303    45        
--
>815_1516_2952_F3	ENSMUST00000113126	-	2596	2624	19	47	50	170	1x3x3x10x2x7x3	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                   |X||X||X|||||||||X|X||||||X||
T:               ------------------AcAGaGGtGTGGTGTGGtGtCAGGGTgCT---
R:         19   T12.23302010303131233123203111011110210212001332010    47        
--
>815_1529_1273_F3	ENSMUST00000113126	-	2603	2620	20	37	50	180	18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    ||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCA-------------
R:         20   T23.22111303221223123201111011110111213120312222021    37        
--
>815_1570_4170_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	2x3x3x8x10	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               ||X||X||X|||||||X|||||||||
T:               --------------GAcAGaGGtGTGGTGTgGTGTCAGGG----------
R:         15   T10.02010300221023123203111011120111212000100210200    40        
--
>815_1917_874_F3	ENSMUST00000113126	-	2600	2622	18	40	50	170	2x15x2x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                  ||X||||||||||||||X|X|||
T:               -----------------AGaGGTGTGGTGTGGTGtCaGGG----------
R:         18   T23.22010303101331323201111011110113202003302223311    40        
--
>815_2837_1175_F3	ENSMUST00000113126	-	919	939	22	42	50	170	9x2x10	
G:        939    TTGAACAGGCAGATTACAAAATTGTGTTGTCTACTTGGATAAAGCAATGT    919       
                                      |||||||||X|X|||||||||
T:               ---------------------TTGTGTTGTcTaCTTGGATAA--------
R:         22   T02.30201030310112332320111101112112010233011310320    42        
--
>815_3675_229_F3	ENSMUST00000113126	-	2600	2621	19	40	50	180	4x15x3	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                   ||||X||||||||||||||X||
T:               ------------------GAGGtGTGGTGTGGTGTCAgGG----------
R:         19   T31.02010300201011132202111011110111210000220213232    40        
--
>815_3888_3706_F3	ENSMUST00000113126	-	2601	2623	18	40	50	170	1x3x10x9	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  |X||X|||||||||X||||||||
T:               -----------------CaGAgGTGTGGTGTgGTGTCAGG----------
R:         18   T02.30201030313012332230111101110011121203032203323    40        
--
>816_3609_1194_F3	ENSMUST00000113126	-	2602	2629	12	39	50	166	2x2x2T2x11x8	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X| ||X||||||||||X|||||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCAG-----------
R:         12   T02.302010303103123323201111011120111212230.2323332    39        
--
>817_1273_2554_F3	ENSMUST00000113126	-	2606	2627	13	34	50	160	5x2x3x12	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                             |||||X|X||X|||||||||||
T:               ------------TAGACaGaGGtGTGGTGTGGTG----------------
R:         13   T23302010300133221223203111011110112202.10200.13311    34        
--
>817_1506_2185_F3	ENSMUST00000113126	-	2071	2098	10	37	50	180	3x5x1x2x10x7	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                          |||X||||XX|X|||||||||X||||||
T:               ---------TGAgAGCTccAaCCACAGCTTtTGTAAT-------------
R:         10   T00233031111232232011110111232030113033.21200.02230    37        
--
>817_1957_2305_F3	ENSMUST00000113126	-	2606	2625	15	34	50	160	5x3x12	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||X|||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTG----------------
R:         15   T23102012101021321123203111011110110202.13303.03102    34        
--
>817_2492_2718_F3	ENSMUST00000113126	-	2597	2623	15	41	50	166	x6x8x8C4	
G:       2623    ATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCC    2597      
                               X|||||X|||||||X||||||| ||||
T:               --------------cAGAGGtGTGGTGTgGTGTCAGCGTGC---------
R:         15   T20121032013203312220311101112011121233.33013.21300    41        
--
>817_2797_4572_F3	ENSMUST00000113126	-	2605	2625	16	36	50	170	x16x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAA    2605      
                                X|||||||||||||||X||||
T:               ---------------gACAGAGGTGTGGTGTgGTGT--------------
R:         16   T02130201330330102112220111101112011130.20211.23322    36        
--
>817_3215_94_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	11x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||||||||||X||||||
T:               --------------------AGGTGTGGTGTgGTGTCA------------
R:         21   T02030201330310112332320111101112011121.30033.22232    38        
--
>817_3985_4042_F3	ENSMUST00000113126	-	2600	2623	18	41	50	170	1x13x6x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |X||||||||||||X|||||X|||
T:               -----------------CaGAGGTGTGGTGTgGTGTCaGGG---------
R:         18   T02330201030313112332220111101112011120.10032.11122    41        
--
>820_679_162_F3	ENSMUST00000113126	-	2597	2620	21	44	50	160	x3x17x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAA    2597      
                                     X||X||||||||||||||||X|||
T:               --------------------aGGtGTGGTGTGGTGTCAGGgTGC------
R:         21   T02.30201230310312000320311101111011121.011.2.02023    44        
--
>820_3483_1749_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x13x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||||||||||||X||
T:               --------------GACAGaGGTGTGGTGTGGtGT---------------
R:         15   T23.02013303302021123201111011110311102.023.3.20013    35        
--
>821_313_394_F3	ENSMUST00000113126	-	2603	2620	20	37	50	180	18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    ||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCA-------------
R:         20   T01.021133212113102332011110111101112111303.0.30100    37        
--
>821_665_3119_F3	ENSMUST00000113126	-	2601	2627	13	39	50	210	2x5x3x17	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                             ||X||||X||X||||||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTCAGG-----------
R:         13   T23.220101202030211232031110111101112120201.0.23131    39        
--
>821_1680_1659_F3	ENSMUST00000113126	+	2605	2620	23	38	50	160	16	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                       ||||||||||||||||
T:               ----------------------ACACCACACCACACCT------------
R:         23   T23.020133210010010132031110111101111023203.3.10310    38        
--
>821_1868_1632_F3	ENSMUST00000113126	+	2595	2622	13	40	50	166	2x2x2x1x2T18	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                             ||X|X|XX| ||||||||||||||||||
T:               ------------CAgCaCccTTACACCACACCACACCTCT----------
R:         13   T23.020133200310301232031110111101111022223.2.20210    40        
--
>821_2148_1149_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	3x3x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |||X||X||X|||||||||||||
T:               -------------AGAcAGaGGtGTGGTGTGGTGTC--------------
R:         14   T10.020103032312231232031110111101112232033.3.00321    36        
--
>821_3263_1557_F3	ENSMUST00000113126	-	2602	2617	23	38	50	160	16	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                       ||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAG------------
R:         23   T23.002133023003221333031110111101112121202.2.23333    38        
--
>821_3609_2631_F3	ENSMUST00000113126	-	2601	2623	18	40	50	170	14x4x2x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  ||||||||||||||X|||X|X||
T:               -----------------CAGAGGTGTGGTGTgGTGtCaGG----------
R:         18   T32.202010303131123122201111011120110202030.2.32012    40        
--
>822_195_2295_F3	ENSMUST00000113126	-	2600	2620	18	38	50	156	3x14C3	
G:       2620    ATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCC    2600      
                                  |||X||||||||||||| |||
T:               -----------------AGGtGTGGTGTGGTGTCCGGG------------
R:         18   T31.21030013112312320311101111011120300.03..2.31010    38        
--
>822_462_1811_F3	ENSMUST00000113126	-	2602	2630	10	38	50	170	2x4x2x2x13x2x4	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                          ||X|||X|X|X||||||||||||X|X|||
T:               ---------GTgTAGaCaGaGGTGTGGTGTGGtGtCAG------------
R:         10   T01.22011231013231223201111011110312212.33..0.12310    38        
--
>822_2156_1168_F3	ENSMUST00000113126	+	2591	2628	9	46	50	166	1x5x2x2x1x1x1T18x6	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                         |X||||X|X|XXX ||||||||||||||||||X|||||
T:               --------TaCCCAgCaCcctTACACCACACCACACCTCTgTCTAC----
R:          9   T33.03110321001330123003111011110111102.23..0.22223    46        
--
>822_2545_1616_F3	ENSMUST00000113126	-	2603	2628	12	37	50	180	1x6x1x3x15	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                            |X|||||XX||X||||||||||||||
T:               -----------GtAGACAgaGGtGTGGTGTGGTGTCA-------------
R:         12   T23.01210300003221103203111011110111213.13..3.03311    37        
--
>822_2555_860_F3	ENSMUST00000113126	-	2605	2625	16	36	50	170	3x13x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAA    2605      
                                |||X||||||||||||X||||
T:               ---------------GACaGAGGTGTGGTGTgGTGT--------------
R:         16   T02.30201330310212132220111101112011132.00..1.22223    36        
--
>822_2710_842_F3	ENSMUST00000113126	+	2594	2617	12	35	50	160	4x3x1x2x14	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2617      
                            ||||X||XX|X|||||||||||||
T:               -----------CCAGcACccTgACACCACACCACA---------------
R:         12   T13.20013303201201113202111011110111313.30..1.23031    35        
--
>822_2882_3997_F3	ENSMUST00000113126	+	2642	2663	17	38	50	180	11x7x4	
G:       2642    TACACCAGATGCCTCTGCAGACCTCACCATGGTCCCGCCTGTGGCAGCAT    2663      
                                 |||||||||||X||||||X|||
T:               ----------------GCAGACCTCACcATGGTCcCGC------------
R:         17   T31.21030012112312312210221131310122033.33..3.13012    38        
--
>822_3911_3714_F3	ENSMUST00000113126	-	2075	2098	10	33	50	160	4x4x1x2x13	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                          ||||X|||XX|X||||||||||||
T:               ---------TGAGaGCTccAaCCACAGCTTTTG-----------------
R:         10   T22.03031011223232031310111232000132332.30..2.22230    33        
--
>823_2105_3656_F3	ENSMUST00000113126	-	2604	2626	15	37	50	170	1x13x3x6	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                               |X||||||||||||X||X|||||
T:               --------------AgACAGAGGTGTGGtGTgGTGTC-------------
R:         15   T21.30201030313112112220111103112011120.22331.31131    37        
--
>823_2847_785_F3	ENSMUST00000113126	-	2604	2620	21	37	50	150	11x6	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                     |||||||||||X|||||
T:               --------------------AGGTGTGGTGTgGTGTC-------------
R:         21   T11.30201030310232312120111101112011122.30323.23212    37        
--
>823_2969_4738_F3	ENSMUST00000113126	-	2605	2629	12	36	50	170	2x2x3x13x5	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAA    2605      
                            ||X|X||X||||||||||||X||||
T:               -----------TGtAgACaGAGGTGTGGTGTgGTGT--------------
R:         12   T02.30201030310312132220111101112011101.23222.31211    36        
--
>823_3197_4822_F3	ENSMUST00000113126	-	2606	2625	16	35	50	180	16x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAA    2606      
                                ||||||||||||||||X|||
T:               ---------------GACAGAGGTGTGGTGTgGTG---------------
R:         16   T02.30201030310112112220111101112011020.31131.13103    35        
--
>824_1290_336_F3	ENSMUST00000113126	-	2599	2626	14	41	50	190	1x8x12x3x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                              |X|||||||X|||||||||||X||X|||
T:               -------------AgACAGAGGtGTGGTGTGGTGtCAgGGT---------
R:         14   T23.02010300201121122203111011110113210.013.0.00.30    41        
--
>824_1675_4932_F3	ENSMUST00000113126	-	2604	2629	12	37	50	166	2x2x2T13x6	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                            ||X|X| |||||||||||||X|||||
T:               -----------TGtAgATAGAGGTGTGGTGTgGTGTC-------------
R:         12   T10.30201030310312332220111101112011120.003.2.22.21    37        
--
>825_3054_534_F3	ENSMUST00000113126	-	2604	2627	14	37	50	180	2x5x3x14	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                              ||X||||X||X|||||||||||||
T:               -------------TAgACAGaGGtGTGGTGTGGTGTC-------------
R:         14   T31.10201030313332112120311101111011123.33321.20101    37        
--
>826_1134_2428_F3	ENSMUST00000113126	+	2719	2742	7	30	50	180	3x3x11x7	
G:       2719    TGTGTTTAGGACATTTTTTAAATCATTGTGTCTAAGCATCTCAGAGTCAA    2742      
                       |||X||X||||||||||X||||||
T:               ------TAGgACaTTTTTTAAATcATTGTG--------------------
R:          7   T11100233222133000003003113011100313301.01223.02223    30        
--
>826_2759_2660_F3	ENSMUST00000113126	-	2604	2627	13	36	50	160	2x1x4x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||XX|||X||X|||||||||||||
T:               ------------TAgaCAGaGGtGTGGTGTGGTGTC--------------
R:         13   T13302010303203131123203111011110111203.23300.22122    36        
--
>827_228_2152_F3	ENSMUST00000113126	-	2592	2620	21	49	50	170	11x7x3x1x4x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                                     |||||||||||X||||||X||XX|||X||
T:               --------------------AGGTGTGGTGTgGTGTCAgGGtgCTGgGT-
R:         21   T02230201030310312332020111101112011121.30323.22010    49        
--
>827_2350_550_F3	ENSMUST00000113126	-	2604	2627	13	36	50	160	2x1x4x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||XX|||X||X|||||||||||||
T:               ------------TAgaCAGaGGtGTGGTGTGGTGTC--------------
R:         13   T23232020303003301123203111011110111201.13131.21110    36        
--
>827_3555_2540_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111232232011110111232000123003.20331.20102    36        
--
>827_3586_3624_F3	ENSMUST00000113126	-	85	110	16	41	50	170	3x2x2x15x4	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    85        
                                |||X|X|X||||||||||||||X|||
T:               ---------------ACTgGtCaCGTGTGACTGTCGAaTAT---------
R:         16   T13220101031310231230222131111212112322.33323.22303    41        
--
>828_3265_3473_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	2x1x17	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 ||XX||||||||||||||||
T:               ----------------CAgaGGTGTGGTGTGGTGTC--------------
R:         17   T23.02013303002312113201111011110111233.23023.23.23    36        
--
>828_3818_1003_F3	ENSMUST00000113126	-	2600	2622	18	40	50	180	2x2x19	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                  ||X|X||||||||||||||||||
T:               -----------------AGaGgTGTGGTGTGGTGTCAGGG----------
R:         18   T10.02010310121332223221111011110111212.20233.20.01    40        
--
>829_1156_1276_F3	ENSMUST00000113126	+	1150	1176	9	35	50	176	2x4x2G8x10	
G:       1150    GGATTCACAAATTGACATCGCTACAGTACAGGATATGCTTAGCAGCCACC    1176      
                         ||X|||X| ||||||||X|||||||||
T:               --------AAaTTGaCGTCGCTACAgTACAGGATA---------------
R:          9   T23002210303301113123323111131120233121023131220.33    35        
--
>829_1951_2749_F3	ENSMUST00000113126	-	2069	2099	9	39	50	170	1x8x1x2x12x2x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                         |X|||||||XX|X|||||||||||X|X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTaAtCT-----------
R:          9   T00133031111222232011110111232000311002230211130.21    39        
--
>830_284_1221_F3	ENSMUST00000113126	-	2599	2622	19	42	50	190	2x11x11	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                   ||X||||||||||X||||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGGT--------
R:         19   T02.30201030310112332320111101112011121.30102.02101    42        
--
>830_1927_2815_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	3x1x2x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||XX|X|||||||||||||||
T:               ----------------CAGagGtGTGGTGTGGTGTCAG------------
R:         17   T23.01012320303302123003111011110111212.20332.03312    38        
--
>831_3489_23_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T00133031111232232011110111232000133030.11310.01.11    37        
--
>832_1646_2198_F3	ENSMUST00000113126	-	2605	2624	16	35	50	160	4x3x13	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                                ||||X||X||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGT---------------
R:         16   T23.02010303301201123203111011110111003.01223..3313    35        
--
>832_3206_1181_F3	ENSMUST00000113126	-	2603	2629	12	38	50	156	2x2x2T2x11x7	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                            ||X|X| ||X||||||||||X||||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCA------------
R:         12   T02.30201030310312332320111101112011121.23201..0213    38        
--
>833_2233_1367_F3	ENSMUST00000113126	-	2603	2626	13	36	50	180	3x3x3x15	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                             |||X||X||X||||||||||||||
T:               ------------AGAcAGaGGtGTGGTGTGGTGTCA--------------
R:         13   T13.20103212312231232021110111101112101.21003.21.10    36        
--
>833_2392_5042_F3	ENSMUST00000113126	-	2077	2099	14	36	50	156	1x3T4x14	
G:       2099    ATGGATTCTCCCTCTGAGAGCTCCAACCACAGCTTTTCACCATGAAGGAG    2077      
                              |X|| ||||X|||||||||||||
T:               -------------CtGATAGCTcCAACCACAGCTTT--------------
R:         14   T02.30201330310112332323010101112320012.03013.30.11    36        
--
>834_1529_40_F3	ENSMUST00000113126	+	2191	2230	2	41	50	168	x5x3x2G1x8x2x10T2A4	
G:       2191    GAATTGAGGACCTAGCATGTGCCCAGCGTAAGTGCATGCGTGGGTGCGTG    2230      
                  X||||X||X| |X|||||||X|X||||||||| || ||||
T:               -aATTGaGGaCGTaGCATGTGcCcAGCGTAAGTTCAAGCGT---------
R:          2   T23030102031311231311120112331302102102.21312.31001    41        
--
>834_2167_4253_F3	ENSMUST00000113126	-	2078	2095	12	29	50	160	5x13	
G:       2095    TCTCCCTTATCGAGCTCCAACCACAGCTTGTCACCATGAAGGAGATCTTG    2078      
                            |||||X||||||||||||
T:               -----------GAGCTcCAACCACAGCTT---------------------
R:         12   T01030301112322320010101112320303113203.30320.02232    29        
--
>834_3044_3593_F3	ENSMUST00000113126	-	2598	2620	19	41	50	180	3x8x12	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                                   |||X|||||||X|||||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGTG---------
R:         19   T12120103031310231232031110111201112120.11233.31322    41        
--
>835_1968_2268_F3	ENSMUST00000113126	-	730	753	2	25	50	160	1x2x10x6x5	
G:        753    CCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                  |X|X|||||||||X|||||X||||
T:               -CaGcAATATGCAGgCAGTAgGCAC-------------------------
R:          2   T13020103331312231213303111311220323032.10302..2012    25        
--
>835_2680_3997_F3	ENSMUST00000113126	+	1426	1455	9	38	50	186	3G2x4x2x6x12	
G:       1426    TCTAAGCAGCCATGACTACAAGCACCTGTACTTCGAGTCCGACGCAGCCA    1455      
                         ||| ||X|||X|X|||||X|||||||||||
T:               --------GCCGTGaCTAcAaGCACCtGTACTTCGAGT------------
R:          9   T13102210330311112331123110011312023221.23333..0203    38        
--
>835_3264_318_F3	ENSMUST00000113126	-	730	750	5	25	50	170	4x5x12	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||X||||X|||||||||||
T:               ----CAATaTGCAgGCAGTAGGCAC-------------------------
R:          5   T13022103031313031213203111211213223120.00133..3023    25        
--
>835_3858_1121_F3	ENSMUST00000113126	-	728	753	2	27	50	180	1x2x4x6x13	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGCGCCTGTGATCTGAGAGACAGGT    728       
                  |X|X|||X|||||X||||||||||||
T:               -CaGcAATaTGCAGgCAGTAGGCACTG-----------------------
R:          2   T13020103031312231213203112111332202101.10101..2332    27        
--
>836_344_3850_F3	ENSMUST00000113126	-	2601	2625	14	38	50	170	2x3x3x8x9	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                              ||X||X||X|||||||X||||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGG------------
R:         14   T10.20103031311231232031110111201112120.00122.00032    38        
--
>836_770_1944_F3	ENSMUST00000113126	-	89	110	16	37	50	160	3x2x2x15	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    89        
                                |||X|X|X||||||||||||||
T:               ---------------ACTgGtCaCGTGTGACTGTCGA-------------
R:         16   T23.13213331313231230222131111212112321.13333.10300    37        
--
>836_2813_1949_F3	ENSMUST00000113126	-	2600	2626	14	40	50	180	3x3x3x11x7	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              |||X||X||X||||||||||X||||||
T:               -------------AGAcAGaGGtGTGGTGTGGTgTCAGGG----------
R:         14   T32.00010303020223123203111011110131212.22033.31111    40        
--
>836_3731_1828_F3	ENSMUST00000113126	-	2600	2623	17	40	50	170	3x3x14x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGG----------
R:         17   T23.02010300301330123203111011110111202.33320.12332    40        
--
>837_498_4159_F3	ENSMUST00000113126	-	2604	2626	15	37	50	150	1x2x14x3x3	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                               |X|X|||||||||||||X||X||
T:               --------------AgAcAGAGGTGTGGTGTgGTgTC-------------
R:         15   T02.30201030313112312220111101112010123.13022.32.20    37        
--
>837_1279_3950_F3	ENSMUST00000113126	-	2600	2622	19	41	50	180	2x11x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGG---------
R:         19   T02.30201030310112332320111101112011121.30032.23.23    41        
--
>837_2721_1325_F3	ENSMUST00000113126	-	2604	2622	19	37	50	170	13x6	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                   |||||||||||||X|||||
T:               ------------------AGAGGTGTGGTGTgGTGTC-------------
R:         19   T31.30201030310212032220111101112011123.23002.22.23    37        
--
>837_2770_3770_F3	ENSMUST00000113126	-	2604	2625	16	37	50	180	5x11x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                |||||X||||||||||X|||||
T:               ---------------GACAGaGGTGTGGTGTgGTGTC-------------
R:         16   T02.30201030310112112320111101112011123.22301.12.23    37        
--
>838_244_399_F3	ENSMUST00000113126	+	2322	2347	19	44	50	170	3x2x15x3x3	
G:       2322    GAGAGACAGGTGCTGGTAATATAGTGTGACAGTGTCTCCAAGTGGTGCTG    2347      
                                   |||X|X||||||||||||||X||X||
T:               ------------------ATAtAgTGTGACAGTGTCTCcAAgTG------
R:         19   T12.30201130310012333323011112112111222.20311.12303    44        
--
>839_405_1584_F3	ENSMUST00000113126	-	2602	2623	11	32	50	160	1x2x8x11	
G:       2623    TAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCCCTCA    2602      
                           |X|X|||||||X||||||||||
T:               ----------CaGaGGTGTGGtGTGGTGTCAG------------------
R:         11   T10023131122323201111031110111212203230.31111.22323    32        
--
>839_768_1574_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23122013321301031123203111011110111203.33323.21212    36        
--
>839_836_2633_F3	ENSMUST00000113126	-	2600	2625	16	41	50	190	2x14x6x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X|||||||||||||X|||||X|||
T:               ---------------GAcAGAGGTGTGGTGTgGTGTCaGGG---------
R:         16   T02330201030313312312220111101112011123.20210.21112    41        
--
>839_2024_3438_F3	ENSMUST00000113126	-	2603	2627	13	37	50	190	1x6x13x5	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                             |X|||||X||||||||||||X||||
T:               ------------TaGACAGaGGTGTGGTGTGGtGTCA-------------
R:         13   T23102010301101221123201111011110011210.30131.13323    37        
--
>839_2832_4074_F3	ENSMUST00000113126	-	79	114	13	48	50	200	2x5x2x2x13x6x2x4	
G:        114    GCTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATATGAGCTATT    79        
                             ||X||||X|X|X||||||||||||X|||||X|X|||
T:               ------------CAtCACTgGtCaCGTGTGACTGTCgAATATgAgCTA--
R:         13   T31002010313131121123022213111121211222.13302.32332    48        
--
>839_3034_2703_F3	ENSMUST00000113126	-	91	116	10	35	50	160	2x4x3x2x2x13	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                          ||X|||X||X|X|X||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTC---------------
R:         10   T01032010331313231230222131111212112103.23333.33212    35        
--
>840_327_2369_F3	ENSMUST00000113126	-	766	798	2	34	50	162	2x9x7x3x3x2G2T3	
G:        798    ATGGAATCCAGTGGCGGAAAATCCGTGTCGACCTTGCGTGCGTAGCCTTC    766       
                  ||X||||||||X||||||X||X||X| || |||
T:               -TGgAATCCAGTgGCGGAAaATcCGtGGCGTCCT----------------
R:          2   T11122032012120330201030033103312020311.011.0.22200    34        
--
>840_1699_961_F3	ENSMUST00000113126	-	91	118	8	35	50	166	11x2x6x3C2x3	
G:        118    CTCTGTAGTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                        |||||||||||X|X|||||X|| ||X||
T:               -------GTGTCATCACTgGtCACGTgTGCCTgTC---------------
R:          8   T00133033111213211200021131211302312001.003.0.31132    35        
--
>840_1967_3452_F3	ENSMUST00000113126	-	2602	2623	14	35	50	160	3x3x13x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCCC    2602      
                              |||X||X||||||||||||X||
T:               -------------CAGaGGtGTGGTGTGGTGTcAG---------------
R:         14   T22010303131123123203111011110111312321.132.2.20332    35        
--
>840_3850_2964_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23002010302003031123203111011110111201.133.2.02232    36        
--
>842_1494_26_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x2x16	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X|X|||||||||||||||
T:               ---------------GAcAGaGgTGTGGTGTGGTGTCA------------
R:         16   T02130201030313112312323111101111011121.333.1..0003    38        
--
>842_1634_756_F3	ENSMUST00000113126	-	2601	2625	16	40	50	160	x4x3x13x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                X|||X||X||||||||||||X||||
T:               ---------------gACAgAGgTGTGGTGTGGTGtCAGG----------
R:         16   T02130201330331002113223111101111011021.110.0..3332    40        
--
>842_2069_2141_F3	ENSMUST00000113126	+	530	560	11	41	50	186	1x3x11x2x4A9	
G:        530    ATGAGTACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACT    560       
                           |X||X||||||||||X|X||| |||||||||
T:               ----------CaAGtTTGATGGCAAgGgTCAAGTGGGTACA---------
R:         11   T33002010331302000123103101011210211001.311.3..2112    41        
--
>842_2699_1790_F3	ENSMUST00000113126	-	2601	2622	19	40	50	170	2x11x9	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                   ||X||||||||||X||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGG----------
R:         19   T02330201030313312332320111101112011121.332.3..3033    40        
--
>842_3159_1058_F3	ENSMUST00000113126	-	2600	2627	13	40	50	196	4T5x10x8	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                             |||| |||||X|||||||||X|||||||
T:               ------------TAGATAGAGGtGTGGTGTGGtGTCAGGG----------
R:         13   T23302010303103223322203111011110211212.033.3..2310    40        
--
>843_156_3976_F3	ENSMUST00000113126	-	2597	2625	14	42	50	170	2x3x3x8x8x2x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                              ||X||X||X|||||||X|||||||X|X||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGgGtGC--------
R:         14   T130201030323102312320311101112011121210013.2.32.30    42        
--
>843_1485_512_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T001330311112322320111101112323001130032003.1.32.20    36        
--
>843_1897_952_F3	ENSMUST00000113126	-	2596	2615	16	35	50	160	1x13x6	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTAAAAATCCCTCAAAG    2596      
                                |X||||||||||||X|||||
T:               ---------------TgGTGTGGTGTCAGgGTGCT---------------
R:         16   T001330311112322320111101112123011320303112.1.21.13    35        
--
>844_741_4483_F3	ENSMUST00000113126	-	2604	2623	18	37	50	180	14x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                  ||||||||||||||X|||||
T:               -----------------CAGAGGTGTGGTGTgGTGTC-------------
R:         18   T020302010303101123122201111011120111222131.1.13.23    37        
--
>844_1238_3875_F3	ENSMUST00000113126	-	2607	2628	12	33	50	180	1x7x14	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTACTGTTTGAAAAAAAAT    2607      
                            |X||||||X|||||||||||||
T:               -----------GtAGACAGaGGTGTGGTGTGGT-----------------
R:         12   T233020103030032211232011110111101010302222.2.03.00    33        
--
>844_1622_144_F3	ENSMUST00000113126	-	2604	2624	16	36	50	150	1x3x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                |X||X||X|||||||||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTC--------------
R:         16   T031320103212030031232031110111101112033333.2.02.13    36        
--
>844_2257_2408_F3	ENSMUST00000113126	+	2604	2623	22	41	50	160	1x13x6	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                      |X||||||||||||X|||||
T:               ---------------------GaCACCACACCACAcCTCTG---------
R:         22   T201020103310033021232031110111101110022213.3.11.03    41        
--
>844_2445_1137_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T313302010303131123121201111011120111213332.0.02.10    38        
--
>844_2523_2416_F3	ENSMUST00000113126	+	1492	1513	20	41	50	186	5A16	
G:       1492    AGTGAGATCGTGCTCAAGGTTAACTACATCCTGGAATCACGAGCGAGCAC    1513      
                                    ||||| ||||||||||||||||
T:               -------------------TTAACAACATCCTGGAATCACG---------
R:         20   T132101030313102312320301101132021020321131.1.10.22    41        
--
>844_2657_1796_F3	ENSMUST00000113126	-	2597	2625	14	42	50	170	2x3x3x8x2x8x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                              ||X||X||X|||||||X|X|||||||X||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGGtGC--------
R:         14   T100201030313102312320311101112021121200313.1.10.23    42        
--
>844_3380_2523_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x2x16	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X|X|||||||||||||||
T:               -----------------CAGaGgTGTGGTGTGGTGTCA------------
R:         18   T023302010303131123123231111011110111210202.3.21.03    38        
--
>845_142_2686_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x12x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X|||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAAT-------------
R:          9   T00133031111232232011110111232000313030200331231.01    37        
--
>845_448_2083_F3	ENSMUST00000113126	-	2602	2622	19	39	50	170	4x9x8	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                   ||||X||||||||X|||||||
T:               ------------------AGAGgTGTGGTGTgGTGTCAG-----------
R:         19   T02130201030310312322223111101112011121223202322.10    39        
--
>845_4270_1625_F3	ENSMUST00000113126	-	2592	2620	19	47	50	170	3x8x2x6x1x5x4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2592      
                                   |||X|||||||X|X|||||XX||||X|||
T:               ------------------AGGtGTGGTGTgGtGTCAGggTGCTgGGT---
R:         19   T13020103031310231232031110111202112123111323001.10    47        
--
>846_161_4072_F3	ENSMUST00000113126	+	2656	2678	1	23	50	170	4x9x7x3	
G:       2656    GGTCCCGCCTGTGGCAGCATCCTTGGGCCAGGGCCACAGCCGATATCTTA    2678      
                 ||||X||||||||X||||||X||
T:               GGTCcCGCCTGTGgCAGCATcCT---------------------------
R:          1   T101210330211123123133021011121001120002013.0.01.02    23        
--
>846_573_4947_F3	ENSMUST00000113126	+	2598	2626	16	44	50	166	2x2x2T13x3x6	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                ||X|X| |||||||||||||X||X|||||
T:               ---------------CAcCcTTACACCACACCACAcCTcTGTCT------
R:         16   T221123101310230013032031110111101113021211.0.10.13    44        
--
>846_2184_4267_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x12x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X|||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTGgTGTCAG-----------
R:         18   T022302010303103022123201111011111111212331.1.11.11    39        
--
>846_2283_3740_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	12x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||X|||||
T:               ----------------------ACACCACACCACaCCTCT----------
R:         23   T233022103003023023232031110111101101022203.3.30.22    40        
--
>846_2578_1153_F3	ENSMUST00000113126	+	2605	2629	23	47	50	170	x13x6x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                                       X||||||||||||X|||||X|||||
T:               ----------------------aCACCACACCACAcCTCTGtCTACA---
R:         23   T231002103023331113230031110111101113022213.2.01.33    47        
--
>846_2899_4286_F3	ENSMUST00000113126	+	2605	2626	23	44	50	170	13x5x4	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2626      
                                       |||||||||||||X||||X|||
T:               ----------------------ACACCACACCACAcCTCTgTCT------
R:         23   T231020103012033231232031110111101113022201.3.23.00    44        
--
>846_2909_31_F3	ENSMUST00000113126	+	1235	1253	23	41	50	170	15x4	
G:       1235    GCATGATCCACAGACTGCGATTCACGACGGATGTGCAGTTAGGTATCTCT    1253      
                                       |||||||||||||||X|||
T:               ----------------------CACGACGGATGTGCAgTTA---------
R:         23   T001330311112322320111101132130231113101030.1.00.11    41        
--
>846_3494_216_F3	ENSMUST00000113126	-	719	753	2	36	50	210	x3x10x8x4x1x2x7	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  X||X|||||||||X|||||||X|||XX|X||||||
T:               -cAGcAATATGCAGgCAGTAGGcACTgaCaTTGTCA--------------
R:          2   T111201033313122312132001120112301121031312.2.13.30    36        
--
>846_3925_3159_F3	ENSMUST00000113126	-	2594	2616	22	44	50	160	1x2x15x5	
G:       2616    ATTCTAAACAATCAGCCCAGGGTGGTGTGGTGTCAGGGTGCTGGAAATCC    2594      
                                      |X|X||||||||||||||X||||
T:               ---------------------GtGgTGTGGTGTCAGGGTgCTGG------
R:         22   T312233020103033310232231111110111212001332.0.20.23    44        
--
>847_693_1042_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320311101112320001012012103.2.0222.    33        
--
>847_1363_4958_F3	ENSMUST00000113126	-	2598	2620	19	41	50	170	3x8x2x10	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAATC    2598      
                                   |||X|||||||X|X|||||||||
T:               ------------------AGGtGTGGTGTgGtGTCAGGGTG---------
R:         19   T211201030313102312320311101112021121200111.0.2132.    41        
--
>847_1370_3976_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x13x3	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X||||||||||||X||
T:               ------------GAGCTccAaCCACAGCTTTTGtAA--------------
R:         13   T311332313112322320311101112320001330002211.0.1323.    36        
--
>847_3237_1178_F3	ENSMUST00000113126	-	2600	2625	16	41	50	180	2x3x11x5x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                ||X||X||||||||||X||||X||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTcAGGG---------
R:         16   T023302010303133123123201111011120111012002.0.2022.    41        
--
>848_893_1236_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	1x2x2x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |X|X|X||X|||||||||||||||
T:               --------------GaCaGaGGtGTGGTGTGGTGTCAG------------
R:         15   T23102013000301331223203111011110111212.103.0.31322    38        
--
>848_1122_2768_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	2x5x3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             ||X||||X||X||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGT---------------
R:         13   T23322010000303321123203111011110111301.333.3.02212    35        
--
>848_1198_2910_F3	ENSMUST00000113126	+	2602	2623	20	41	50	170	2x13x7	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                    ||X||||||||||||X||||||
T:               -------------------CTgACACCACACCACaCCTCTG---------
R:         20   T23322010003003103113202111011110112102.213.0.01302    41        
--
>848_1410_5008_F3	ENSMUST00000113126	-	2602	2626	14	38	50	190	1x5x3x16	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X||||X||X|||||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTCAG------------
R:         14   T10302010303200321123203111011110111212.013.1.32323    38        
--
>848_1436_1823_F3	ENSMUST00000113126	-	2599	2623	14	38	50	170	3x3x12x4x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                              |||X||X|||||||||||X|||X||
T:               -------------CAGaGGtGTGGTGTGGTGtCAGgGT------------
R:         14   T22010303131123123203111011110113212301.120.3.22222    38        
--
>848_3323_443_F3	ENSMUST00000113126	-	2602	2621	15	34	50	160	1x4x15	
G:       2621    TCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCCCT    2602      
                               |X|||X||||||||||||||
T:               --------------GaGGTgTGGTGTGGTGTCAG----------------
R:         15   T02230201030313302012110111101112121302.220.0.33203    34        
--
>848_3649_3395_F3	ENSMUST00000113126	+	2589	2629	7	47	50	166	2x1x2x3x4x1x2T13x3x3x6	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                       ||XX|X||X|||XX| |||||||||||||X||X||X|||||
T:               ------GGtaCcCAgCACccTTACACCACACCACAcCTcTGtCTACA---
R:          7   T23302010001301031123203111011110111202.213.0.21311    47        
--
>849_788_3498_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T02130201030320312312320111101112011121.002.2.23..2    38        
--
>849_1065_4801_F3	ENSMUST00000113126	-	1078	1101	18	41	50	210	17x7	
G:       1101    CTTGATCAAATTTCTTACCAGGCAGAACTCCCAGGCGTTCTCATTTCTCT    1078      
                                  |||||||||||||||||X||||||
T:               -----------------CCAGGCAGAACTCCCAGgCGTTCT---------
R:         18   T20300112031313231201203122012200122331.023.2.31..2    41        
--
>849_1108_4433_F3	ENSMUST00000113126	-	2602	2623	16	37	50	160	3x3x2x14	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||X|X|||||||||||||
T:               ---------------CAGaGGtGtGGTGTGGTGTCAG-------------
R:         16   T31020103032312231232031010111101112121.023.2.30..2    37        
--
>849_2293_639_F3	ENSMUST00000113126	-	88	116	10	38	50	170	2x4x3x2x2x12x4	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    88        
                          ||X|||X||X|X|X|||||||||||X|||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTcGAA------------
R:         10   T13020103031313231230222131111212113320.023.3.00..3    38        
--
>849_3936_23_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02130201030313112312320111101112011121.200.1.32..3    38        
--
>850_152_4007_F3	ENSMUST00000113126	-	2598	2617	23	42	50	180	10x10	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                       ||||||||||X|||||||||
T:               ----------------------TGTGGTGTGGtGTCAGGGTG--------
R:         23   T321020101031311231230021110111103112120011.1.23.22    42        
--
>850_1167_1830_F3	ENSMUST00000113126	-	1420	1452	14	46	50	210	3x2x8x10x4x6	
G:       1452    AGAAAACTGAACACGAAGTACAGGTGCTTGTAGTCATGGCTGCTTAAATC    1420      
                              |||X|X|||||||X|||||||||X|||X|||||
T:               -------------CGAaGtACAGGTGcTTGTAGTCAtGGCtGCTTA----
R:         14   T220103031311233232031120111201132121210331.0.31.00    46        
--
>850_1439_4901_F3	ENSMUST00000113126	-	730	750	5	25	50	190	9x12	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     |||||||||X|||||||||||
T:               ----CAATATGCAgGCAGTAGGCAC-------------------------
R:          5   T020221033313100312132031111113100320230033.2.21.21    25        
--
>850_2342_2631_F3	ENSMUST00000113126	+	2594	2616	12	34	50	170	1x8x2x12	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                            |X|||||||X|X|||||||||||
T:               -----------CcAGCACCCtGaCACCACACCAC----------------
R:         12   T221221030313112311003131110111101122213303.0.22.00    34        
--
>851_469_4622_F3	ENSMUST00000113126	-	2075	2098	10	33	50	180	8x1x2x13	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                          ||||||||XX|X||||||||||||
T:               ---------TGAGAGCTccAaCCACAGCTTTTG-----------------
R:         10   T001333311112222320311101112320001011011132..1221..    33        
--
>851_578_4163_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T230320103030012231232031110111101112123331..2213..    38        
--
>851_1203_2470_F3	ENSMUST00000113126	-	2599	2625	15	41	50	190	3x2x3x15x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               |||X|X||X||||||||||||||X|||
T:               --------------GACaGaGGtGTGGTGTGGTGTCAgGGT---------
R:         15   T233020103212310212232031110111101112110012..1232..    41        
--
>851_1224_307_F3	ENSMUST00000113126	+	2604	2628	22	46	50	170	1x8x10x6	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                      |X|||||||X|||||||||X|||||
T:               ---------------------GaCACCACAcCACACCTCTgTCTAC----
R:         22   T231020103000010233233031110111201111022231..3132..    46        
--
>851_1258_808_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	1x6x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             |X|||||X||X|||||||||||||
T:               ------------TaGACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T231020103033012211232031110111101112322203..2222..    36        
--
>851_1314_88_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T001330311112222320111101112320031130113202..3000..    36        
--
>851_1422_786_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	3x3x12x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGtCAG------------
R:         17   T231020103033030231232031110111101132121223..2321..    38        
--
>851_1581_1310_F3	ENSMUST00000113126	-	2602	2617	23	38	50	160	16	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                       ||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAG------------
R:         23   T233020323033211231232031110111101112122333..0301..    38        
--
>851_1626_1363_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	2x5x3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             ||X||||X||X||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGT---------------
R:         13   T131020103030033211232031110111101113131300..3232..    35        
--
>851_1801_3554_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T231020103013010321232031110111101111022231..2322..    40        
--
>851_1809_3670_F3	ENSMUST00000113126	-	2600	2622	18	40	50	170	2x3x14x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                  ||X||X|||||||||||||X|||
T:               -----------------AGaGGtGTGGTGTGGTGTCaGGG----------
R:         18   T231020103032011233232031110111101112320023..2221..    40        
--
>851_2050_1060_F3	ENSMUST00000113126	-	720	750	5	35	50	176	4x6x10x1x1C3x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                     ||||X|||||X|||||||||XX |||X||||
T:               ----CAATaTGCAGgCAGTAGGCActCACAtTGTC---------------
R:          5   T000201030313122312132031312111101122332130..2201..    35        
--
>851_2156_833_F3	ENSMUST00000113126	-	2601	2622	18	39	50	200	2x20	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  ||X|||||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTCAGG-----------
R:         18   T010020133010113232232011110111101112120331..3133..    39        
--
>851_2300_3073_F3	ENSMUST00000113126	-	2598	2624	16	42	50	190	4x11x6x2x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                ||||X||||||||||X|||||X|X|||
T:               ---------------ACAGaGGTGTGGTGTgGTGTCaGgGTG--------
R:         16   T233020103010010111232011110111201112022011..2013..    42        
--
>851_2436_2276_F3	ENSMUST00000113126	-	2603	2623	17	37	50	190	3x18	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X|||||||||||||||||
T:               ----------------CAGaGGTGTGGTGTGGTGTCA-------------
R:         17   T010020133230010331232011110111101112110203..0303..    37        
--
>851_3204_1660_F3	ENSMUST00000113126	-	2604	2628	12	36	50	170	1x2x5x3x14	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                            |X|X||||X||X|||||||||||||
T:               -----------GtAgACAGaGGtGTGGTGTGGTGTC--------------
R:         12   T133020103033030211232031110111101112312333..3102..    36        
--
>851_3434_4369_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T233020103000033221232031110111101112122333..2200..    38        
--
>852_179_2729_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	13x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||||||||X||||
T:               ----------------------ACACCACACCACAcCTCT----------
R:         23   T233020103030311211232331110111101113022223.2.22.33    40        
--
>852_420_2949_F3	ENSMUST00000113126	-	2602	2627	13	38	50	200	2x5x3x16	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                             ||X||||X||X|||||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTCAG------------
R:         13   T233020103001333211232031110111101112122320.2.21.12    38        
--
>852_595_871_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x9x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||||X|||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAAT-------------
R:          9   T001330311112222320311101112323001130313103.0.12.22    37        
--
>852_1016_915_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T233020103003011311232031110111101112023200.3.21.23    36        
--
>852_1081_983_F3	ENSMUST00000113126	-	2600	2625	15	40	50	200	8x11x3x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               ||||||||X||||||||||X||X|||
T:               --------------GACAGAGGtGTGGTGTGGTgTCaGGG----------
R:         15   T233020103031331211222021110111101212320023.3.33.12    40        
--
>852_1096_3440_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T001330311112222320111101112320001230031333.2.01.32    36        
--
>853_385_4276_F3	ENSMUST00000113126	-	2606	2631	9	34	50	180	3x3x3x2x15	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                         |||X||X||X|X||||||||||||||
T:               --------GGTgTAgACaGaGGTGTGGTGTGGTG----------------
R:          9   T01001013301013321223201111011110110002.203.2.32.22    34        
--
>853_3558_3046_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111222232031110111232000313001.113.2.30.30    36        
--
>854_836_422_F3	ENSMUST00000113126	-	731	752	3	24	50	180	2x10x10	
G:        752    CCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    731       
                   ||X|||||||||X|||||||||
T:               --AGcAATATGCAGgCAGTAGGCA--------------------------
R:          3   T23220103331312331213203131111201122121.103.0.30120    24        
--
>854_997_4768_F3	ENSMUST00000113126	-	2604	2626	15	37	50	170	1x2x14x6	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                               |X|X|||||||||||||X|||||
T:               --------------AgAcAGAGGTGTGGTGTgGTGTC-------------
R:         15   T02230201030313112312220111101112011120.000.0.12023    37        
--
>854_1987_1434_F3	ENSMUST00000113126	-	84	123	3	42	50	156	4x1x1C2x4x3x2x2x11x2x3x4	
G:        123    CTTTCCTGTGTCATCACTGGTCACGTGTGACTGTCGAATATGTGAAATTG    84        
                   ||||XX ||X|||X||X|X|X||||||||||X|X||X|||
T:               --TTCCtgCGTcATCaCTgGtCaCGTGTGACTGtCgAAtATG--------
R:          3   T23102010331313231230223131111212102120.331.2.20300    42        
--
>854_4037_1599_F3	ENSMUST00000113126	-	2602	2623	14	35	50	180	6x9x7	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCCC    2602      
                              ||||||X||||||||X||||||
T:               -------------CAGAGGtGTGGTGTGgTGTCAG---------------
R:         14   T22010303131123122203111011111111212131.131.0.22223    35        
--
>855_1375_23_F3	ENSMUST00000113126	-	2960	2983	15	38	50	166	13x4x1G5	
G:       2983    TTTAAAGAGACTGGTGAATATGTGACAAGATTTAATGAGACAATCCAACT    2960      
                               |||||||||||||X|||X |||||
T:               --------------TGAATATGTGACAaGATtGAATGA------------
R:         15   T202210303131123120333111211122331203122200.0.02.10    38        
--
>855_2604_1957_F3	ENSMUST00000113126	-	91	110	17	36	50	160	3x2x15	
G:        110    GCTCTGTATTTGAATTACTGGTCACGTGTGACTGTCATATCTTTGAAATT    91        
                                 |||X|X||||||||||||||
T:               ----------------ACTgGtCACGTGTGACTGTC--------------
R:         17   T233020103031323231230221131111212112032303.3.02.13    36        
--
>856_592_54_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x10x2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||X|X|||
T:               --------CtGAGAGCTccAaCCACAGCTTtTgTAA--------------
R:          9   T001330311112222320311101112320303130002113.3..2313    36        
--
>856_1562_1993_F3	ENSMUST00000113126	-	2076	2095	12	31	50	160	5x3x12	
G:       2095    TCTCCCTTATCGAGCTCCAACCACAGCTTTTCACCATGAAGGAGATCTTG    2076      
                            |||||X||X|||||||||||
T:               -----------GAGCTcCAaCCACAGCTTTT-------------------
R:         12   T010303011123223200111011123200001001333311.1..3323    31        
--
>857_900_1558_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111222232031110111232002113021.131...33333    36        
--
>857_1332_3545_F3	ENSMUST00000113126	-	2606	2627	13	34	50	160	2x5x3x12	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                             ||X||||X||X|||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTG----------------
R:         13   T23102010303303021123203111011110112232.221...02200    34        
--
>859_907_2166_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	3x2x3x10x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||X|X||X|||||||||X|||||
T:               --------------GACaGaGGtGTGGTGTGGtGTCAG------------
R:         15   T23302010303331121323203111011110211212.000.3.3103.    38        
--
>860_1703_2621_F3	ENSMUST00000113126	-	2071	2099	9	37	50	150	1x3x5x1x2x11x2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||X|X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAAT-------------
R:          9   T00133031111232232031110111232003103030.103.1..2.2.    37        
--
>860_2217_4377_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T21102010122200303123203111011110111231.001.2..0.2.    36        
--
>860_2367_1682_F3	ENSMUST00000113126	-	2600	2631	9	40	50	156	2x2C1x3x2x3x13x5	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                         ||X| |X||X|X||X||||||||||||X||||
T:               --------GGtGCAgACaGaGGtGTGGTGTGGTGTcAGGG----------
R:          9   T23301010303131121323203111011110111312.020.3..0.1.    40        
--
>861_897_2663_F3	ENSMUST00000113126	-	2604	2626	14	36	50	176	6x2A14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              ||||||X| ||||||||||||||
T:               -------------AGACAGaGATGTGGTGTGGTGTC--------------
R:         14   T21100210303031221123223111011110111232.022...3323.    36        
--
>861_936_312_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x7x2x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X|X||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAA--------------
R:          9   T00133031111222232031110111202100113001.002...3321.    36        
--
>861_1719_3406_F3	ENSMUST00000113126	-	90	116	10	36	50	170	2x4x3x2x2x14	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATTG    90        
                          ||X|||X||X|X|X|||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCG--------------
R:         10   T23302010331313231230222131111212112302.033...2030.    36        
--
>861_2205_3958_F3	ENSMUST00000113126	-	2604	2623	18	37	50	180	14x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                  ||||||||||||||X|||||
T:               -----------------CAGAGGTGTGGTGTgGTGTC-------------
R:         18   T02330201030313112312220111101112011120.203...2233.    37        
--
>861_2218_2618_F3	ENSMUST00000113126	-	2600	2623	18	41	50	190	3x11x10	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X|||||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAGGG---------
R:         18   T02330201030313112312320111101112011121.300...3233.    41        
--
>861_2294_4175_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T31330201030313312312320111101112011121.233...2232.    38        
--
>861_2635_1834_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x11x5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X||||||||||X||||
T:               -------------GAcAGaGGtGTGGTGTGGTgTCAG-------------
R:         14   T13020103032310231232031110111101312122.331...0033.    37        
--
>861_3707_386_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	11x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||||||||||X||||||
T:               --------------------AGGTGTGGTGTgGTGTCA------------
R:         21   T02330201030313112212320111101112011121.030...1230.    38        
--
>862_2720_2590_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x15x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||||||X||
T:               ---------------GAcAGaGGTGTGGTGTGGTGtCA------------
R:         16   T31330201030313312312320111101111011021.232.0.23.3.    38        
--
>862_3377_304_F3	ENSMUST00000113126	-	2061	2099	9	47	50	166	1x8x1x2x7x2x7x1G3x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X|||||||XX|X||||||X|X||||||X |||X|||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAAtGTGCcTGTTC---
R:          9   T00133031111222232031110111202100113001.331.2.32.1.    47        
--
>862_3498_2038_F3	ENSMUST00000113126	+	2587	2620	5	38	50	172	x6x4x3x1G2T12x4	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                     X|||||X|||X||X || ||||||||||||X|||
T:               ----aAGGTAcCCAgCAcGCTTACACCACACCACaCCT------------
R:          5   T03333020130001331233203111011110112102.223.3.20.3.    38        
--
>862_4204_2066_F3	ENSMUST00000113126	-	77	116	10	49	50	166	2x4x3x2x2x13A1x3x2x7	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATATGAGCTAGAG    77        
                          ||X|||X||X|X|X|||||||||||| |X||X|X||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCAAaTAtGaGCTAGA-
R:         10   T13002103031313231230223131111212112103.011.1.03.3.    49        
--
>863_579_1743_F3	ENSMUST00000113126	+	676	697	15	36	50	160	2x3x13x4	
G:        676    CCTCATCGGGCTCATCTGTTGGCAGTACACGAGTGAAGGACGGGAGCCGA    697       
                               ||X||X||||||||||||X|||
T:               --------------TCtGTtGGCAGTACACGAgTGA--------------
R:         15   T23120013303133121113103121311132311210.013...22.0.    36        
--
>863_1577_3908_F3	ENSMUST00000113126	-	91	114	12	35	50	160	4x3x2x2x13	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                            ||||X||X|X|X||||||||||||
T:               -----------CATCaCTgGtCaCGTGTGACTGTC---------------
R:         12   T23220103031313231230223131111212112103.330...22.0.    35        
--
>863_2228_3858_F3	ENSMUST00000113126	-	2602	2631	9	38	50	166	3T2x5x2x1x12x4	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                         ||| ||X||||X|XX|||||||||||X|||
T:               --------GGTTTAgACAGaGgtGTGGTGTGGTGtCAG------------
R:          9   T23302013301003021123233111011110110212.010...20.2.    38        
--
>863_2431_3120_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	7x12	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  |||||||X|||||||||||
T:               -----------------AGAGGTGtGGTGTGGTGTC--------------
R:         18   T01002013300011113222201121011110111231.013...02.3.    36        
--
>864_1967_3161_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	5x3x13	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               |||||X||X||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGT---------------
R:         15   T23302010321303021123203111011110111102.223.3.31.3.    35        
--
>864_3741_1949_F3	ENSMUST00000113126	-	2596	2623	17	44	50	180	x6x14x4x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAAT    2596      
                                 X|||||X|||||||||||||X|||X|||
T:               ----------------cAGAGGtGTGGTGTGGTGTCaGGGtGCT------
R:         17   T10302210301303320122203111011110111202.031.3.12.2.    44        
--
>865_3039_1428_F3	ENSMUST00000113126	-	2597	2625	14	42	50	180	2x3x3x10x6x5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                              ||X||X||X|||||||||X|||||X||||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAGgGTGC--------
R:         14   T12120103031313231232031110111102112121.313.3.2201.    42        
--
>865_3204_3696_F3	ENSMUST00000113126	+	1958	1985	13	40	50	176	6x2C12x2x5	
G:       1958    TCTCTTTCTTTCCTTTTAATAAACAGGTATACTCTTTATCGTGGTTGGTA    1985      
                             ||||||X| ||||||||||||X|X||||
T:               ------------CTTTTAaTCAACAGGTATACTcTtTATC----------
R:         13   T01030321112022000333210112013331212303.122.3.0313.    40        
--
>866_646_2320_F3	ENSMUST00000113126	-	2600	2626	14	40	50	180	1x8x8x6x4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                              |X|||||||X|||||||X|||||X|||
T:               -------------AgACAGAGGtGTGGTGTgGTGTCaGGG----------
R:         14   T23302010323101021122203111011120111202.32212.13223    40        
--
>866_1243_1119_F3	ENSMUST00000113126	-	2602	2617	23	38	50	160	16	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                       ||||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCAG------------
R:         23   T23302210301301020303203111011110111212.33003.23322    38        
--
>866_2008_800_F3	ENSMUST00000113126	+	2604	2622	22	40	50	160	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T30020103032313231233003111011110111102.13332.22113    40        
--
>866_2363_3136_F3	ENSMUST00000113126	-	2594	2625	16	47	50	200	5x2x9x4x3x9	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                |||||X|X||||||||X|||X||X||||||||
T:               ---------------GACAGaGgTGTGGTGTgGTGtCAgGGTGCTGG---
R:         16   T02330201030313312112023111101112011321.20113.20312    47        
--
>866_3640_263_F3	ENSMUST00000113126	-	2591	2629	12	50	50	210	2x2x2x1x18x4x1x3x6	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2591      
                            ||X|X|XX|||||||||||||||||X|||XX||X|||||
T:               -----------TGtAgAcaGAGGTGTGGTGTGGTGTcAGGgtGCtGGGTA
R:         12   T02130201330313312302220111101111011101.11213.00013    50        
--
>867_1887_3407_F3	ENSMUST00000113126	+	227	245	19	37	50	150	1x7x11	
G:        227    TCAGGGAAGCAGTGGTGAGACGCAGGGCTACATATACGCCCAGTCTGTTG    245       
                                   |X||||||X||||||||||
T:               ------------------GaCGCAGGgCTACATATAC-------------
R:         19   T12122300200301010101133120232311333310.022.0.1023.    37        
--
>868_211_4366_F3	ENSMUST00000113126	-	730	753	2	25	50	180	3x10x7x4	
G:        753    CCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                  |||X|||||||||X||||||X|||
T:               -CAGcAATATGCAGgCAGTAGgCAC-------------------------
R:          2   T131201033313122312132131110132301120212011...2023.    25        
--
>869_1371_2305_F3	ENSMUST00000113126	-	90	113	13	36	50	160	3x3x2x2x14	
G:        113    CTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATTG    90        
                             |||X||X|X|X|||||||||||||
T:               ------------ATCaCTgGtCaCGTGTGACTGTCG--------------
R:         13   T23302010031333231230222131111212112301.033.3.1333.    36        
--
>869_3016_2229_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	4x3x11x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                ||||X||X||||||||||X||||
T:               ---------------ACAGaGGtGTGGTGTGGTgTCAG------------
R:         16   T10302010200331231123203111011110131212.230.2.2201.    38        
--
>869_3886_5039_F3	ENSMUST00000113126	-	1428	1447	19	38	50	180	10x10	
G:       1447    AGAAAACTGAACAGGCGATACAGGTGCTTGTAGTCATGGGAGAAGAAATC    1428      
                                   ||||||||||X|||||||||
T:               ------------------TACAGGTGCTtGTAGTCATG------------
R:         19   T22010301131323123203112011321113212131.132.1.2022.    38        
--
>869_4180_378_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02330201030313312312320111101112011121.203.0.3233.    38        
--
>870_2947_812_F3	ENSMUST00000113126	+	756	787	11	42	50	186	5x3T13x2x1x3x4	
G:        756    TATTGCTGAGGATGATGGGGAGGTCGACACGGATTTTCCGCCACTGGATT    787       
                           |||||X|| |||||||||||||X|XX||X|||
T:               ----------GATGAtGGTGAGGTCGACACGGaTttTCcGCC--------
R:         11   T001030311112312210112201232111300312022330.1.22000    42        
--
>870_3470_1209_F3	ENSMUST00000113126	-	2601	2623	18	40	50	170	3x2x9x9	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  |||X|X||||||||X||||||||
T:               -----------------CAGaGgTGTGGTGTgGTGTCAGG----------
R:         18   T023302010303131123123231111011120111212022.1.03201    40        
--
>873_954_3023_F3	ENSMUST00000113126	-	2601	2620	21	40	50	170	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T02330201030310112332320111101112011121.231.0.12021    40        
--
>874_1987_3995_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	2x8x8x6	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X|||||||X|||||||X|||||
T:               ------------TAgACAGAGGtGTGGTGTgGTGTC--------------
R:         13   T22132010303233321122203111011120111223.032.2.32.1.    36        
--
>875_1998_1571_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x7x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X||||||||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAA--------------
R:          9   T00133031111222232011110111202000113021.313.2.2203.    36        
--
>875_2279_3386_F3	ENSMUST00000113126	-	91	116	10	35	50	160	2x4x3x2x2x13	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                          ||X|||X||X|X|X||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTC---------------
R:         10   T23302010331313231230222131111212112121.103.0.2021.    35        
--
>875_2414_2681_F3	ENSMUST00000113126	-	2604	2623	18	37	50	160	x14x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                  X|||||||||||||X|||||
T:               -----------------cAGAGGTGTGGTGTgGTGTC-------------
R:         18   T02330201030313212312220111101112011120.332.3.0023.    37        
--
>876_788_3850_F3	ENSMUST00000113126	+	2605	2622	23	40	50	170	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T23010113031313231313233111011110111102.033.3.23.2.    40        
--
>876_1610_3925_F3	ENSMUST00000113126	-	2603	2625	15	37	50	156	2x2T3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X| |||X||||||||||||||
T:               --------------GAcATAGGtGTGGTGTGGTGTCA-------------
R:         15   T23020013300301122133203111011110111211.333.3.31.0.    37        
--
>879_1445_3602_F3	ENSMUST00000113126	-	1176	1199	4	27	50	180	12x6x2x4	
G:       1199    AGGCTTGTAATGGTGGCTGCTAAGCATTCCTGCCTGGCAGTCCCAGCAAG    1176      
                    ||||||||||||X|||||X|X|||
T:               ---CTTGTAATGGTGgCTGCTaAgCAT-----------------------
R:          4   T10122011303101123213210331321112122222.013.2120122    27        
--
>879_1969_3639_F3	ENSMUST00000113126	-	2071	2095	12	36	50	170	5x1x2x14x3	
G:       2095    TCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTTG    2071      
                            |||||XX|X|||||||||||||X||
T:               -----------GAGCTccAaCCACAGCTTTTGTaAT--------------
R:         12   T01030301112322320111101112320001100301.001.2312132    36        
--
>879_2160_2472_F3	ENSMUST00000113126	-	2600	2629	11	40	50	196	3G2x1x2x21	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                           ||| ||XX|X||||||||||||||||||||
T:               ----------TGTGGAcaGaGGTGTGGTGTGGTGTCAGGG----------
R:         11   T01001013323111023221201111011110111212.300.2212333    40        
--
>880_186_196_F3	ENSMUST00000113126	-	729	750	5	26	50	180	10x6x6	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGCGCCTGTGATCTGAGAGACAGGT    729       
                     ||||||||||X|||||X|||||
T:               ----CAATATGCAGgCAGTAgGCACT------------------------
R:          5   T020001033313122312133031122312021311021030.1.00131    26        
--
>880_2272_1074_F3	ENSMUST00000113126	-	2600	2620	21	41	50	170	11x5x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X||||X||||
T:               --------------------AGGTGTGGTGTgGTGTcAGGG---------
R:         21   T021302010303103123323201111011100111112002.1.01333    41        
--
>880_2326_1709_F3	ENSMUST00000113126	-	93	119	12	38	50	176	2x4G4x9x7	
G:        119    GCTTGCTCTGTTGTGTCATCACTGGTCACGTGTGACTGAGATATCTTTGA    93        
                            ||X||| ||||X||||||||X||||||
T:               -----------TGtGTCGTCACtGGTCACGTgTGACTG------------
R:         12   T310302012303101123121101012113121121212321.0.03330    38        
--
>880_2547_2280_F3	ENSMUST00000113126	-	730	747	8	25	50	180	18	
G:        747    CCTTCTATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                        ||||||||||||||||||
T:               -------TATGCAGGCAGTAGGCAC-------------------------
R:          8   T212022103313120312132031110110200110012331.3.00223    25        
--
>880_2946_4705_F3	ENSMUST00000113126	+	2587	2622	5	40	50	166	2x2x1x4x2x2x2x2T15x3	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                     ||X|XX|||X|X|X|X| |||||||||||||||X||
T:               ----AAgGtaCCCaGcAcCcTTACACCACACCACACCtCT----------
R:          5   T032020103010002013032031110111101111012202.0.12001    40        
--
>881_1291_1416_F3	ENSMUST00000113126	-	1884	1911	11	38	50	180	1x2x15x1x2x7	
G:       1911    CTGGTTCGCGATTTGATCAAGTTGCAAGGAGATGTCTGCGAGGAGGATTC    1884      
                           |X|X||||||||||||||XX|X||||||
T:               ----------AtTtGATCAAGTTGCAAGgaGaTGTCTG------------
R:         11   T233020123031011232102101310211233112213033.1010232    38        
--
>881_3809_4449_F3	ENSMUST00000113126	+	2965	2993	17	45	50	180	2x4x2x2x15x4	
G:       2965    GACTAATTTGGTCATTAAATCTTGTCACATATTCAATATTAAAATACTAA    2993      
                                 ||X|||X|X|X||||||||||||||X|||
T:               ----------------AAaTCTtGtCaCATATTCAATATTAaAAT-----
R:         17   T330103222313033020332231023113330210333031.1322321    45        
--
>883_437_4921_F3	ENSMUST00000113126	-	2970	2992	8	30	50	170	2x10x2x9	
G:       2992    CTTTTAATTTTAATATTGAATATGTGACAAGGCCTTCTTGGACAATCCAA    2970      
                        ||X|||||||||X|X||||||||
T:               -------TTtTAATATTGAaTaTGTGACAA--------------------
R:          8   T30.23302010303330123323111211011020112.02032.3323.    30        
--
>884_409_1421_F3	ENSMUST00000113126	-	2600	2620	21	41	50	180	11x10	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||X|||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGGG---------
R:         21   T02130201030310312332320111101112011121.203.2.01.1.    41        
--
>884_1078_767_F3	ENSMUST00000113126	-	2598	2624	16	42	50	200	4x3x14x6	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                ||||X||X|||||||||||||X|||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCaGGGTG--------
R:         16   T13102013320301031123203111011110111202.311.0.23.1.    42        
--
>884_2444_2560_F3	ENSMUST00000113126	-	2600	2623	14	37	50	180	3x3x13x5	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCC    2600      
                              |||X||X||||||||||||X||||
T:               -------------CAGaGGtGTGGTGTGGTGTcAGGG-------------
R:         14   T00010303131123123203111011110111012003.333.0.30.3.    37        
--
>884_4205_536_F3	ENSMUST00000113126	-	2595	2629	12	46	50	166	2x2x2T2x11x7x3x5	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                            ||X|X| ||X||||||||||X||||||X||X||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCAgGGtGCTG----
R:         12   T02130201330310312332320111101112011121.203.3.02.1.    46        
--
>885_3541_533_F3	ENSMUST00000113126	+	2601	2623	16	38	50	176	3T12x7	
G:       2601    CAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGAT    2623      
                                ||| ||||||||||||X||||||
T:               ---------------CCTTACACCACACCACaCCTCTG------------
R:         16   T22.10300131123120203111011110113102221.330.1.12130    38        
--
>886_1551_3562_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T10302013320301021121203111011110111203..3323.30022    36        
--
>886_1767_4735_F3	ENSMUST00000113126	-	2604	2627	14	37	50	166	4T2x11x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                              |||| ||X||||||||||X|||||
T:               -------------TAGATAGaGGTGTGGTGTgGTGTC-------------
R:         14   T00130201030310322332320111101112011123..3103.32102    37        
--
>887_1478_4990_F3	ENSMUST00000113126	+	1955	1977	10	32	50	170	6x5x2x10	
G:       1955    TCTCTTTCTTTCCTTTTAATAAACAGGTATACTCTTTATCGTGGTTGGTA    1977      
                          ||||||X||||X|X|||||||||
T:               ---------TTCCTTtTAATaAaCAGGTATAC------------------
R:         10   T31210331330202030303102112013331120132312310330132    32        
--
>888_1062_1861_F3	ENSMUST00000113126	+	2725	2745	13	33	50	170	11x2x8	
G:       2725    TGTGTTTAGGACATTTTTTAAATCATTGTGTCTAAGCATCTCAGAGTCAA    2745      
                             |||||||||||X|X|||||||
T:               ------------ATTTTTTAAATcAtTGTGTCT-----------------
R:         13   T10.33003330003000003003111011112210310.31213.22322    33        
--
>889_1260_2596_F3	ENSMUST00000113126	+	2605	2632	23	50	50	180	x18x1x3x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                       X|||||||||||||||||XX||X|||||
T:               ----------------------aCACCACACCACACCTCTgtCTaCACCA
R:         23   T20001112332303301213303111011110111102.22322.31101    50        
--
>889_3186_4228_F3	ENSMUST00000113126	-	2606	2627	13	34	50	180	1x9x12	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                             |X||||||||X|||||||||||
T:               ------------TaGACAGAGGtGTGGTGTGGTG----------------
R:         13   T13302020301301221122202111011110110002.33120.13111    34        
--
>890_242_3001_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23.02010301302121123203111011110111221.230.0.03.13    36        
--
>890_1754_1638_F3	ENSMUST00000113126	-	2606	2625	15	34	50	160	1x4x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |X|||X||||||||||||||
T:               --------------GaCAGaGGTGTGGTGTGGTG----------------
R:         15   T23.02013303303101123201111011110113332.333.0.22.23    34        
--
>890_2152_1412_F3	ENSMUST00000113126	-	2691	2714	2	25	50	170	1x6x5x12	
G:       2714    CCAGGTCGTATAAGATATCGGCTGTCAAAGAGAGACAAAACCAGATCAAA    2691      
                  |X|||||X||||X|||||||||||
T:               -CaGGTCGtATAAgATATCGGCTGT-------------------------
R:          2   T13.30123333301233323032110111120031123.203.3.20.12    25        
--
>890_2530_3243_F3	ENSMUST00000113126	-	2603	2625	15	37	50	190	2x6x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X|||||X||||||||||||||
T:               --------------GAcAGAGGtGTGGTGTGGTGTCA-------------
R:         15   T00.02010303111323122203111011110111210.333.0.01.12    37        
--
>890_2738_3368_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	1x5x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |X||||X|||||||||||||
T:               ----------------CaGAGGtGTGGTGTGGTGTC--------------
R:         17   T23.02013321303020322203111011110111203.333.0.22.33    36        
--
>890_2867_3568_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x3x5x1x2x12x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X|||||||||||X|||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAATC------------
R:          9   T00.33131111232232011110111232000313032.233.1.11.12    38        
--
>890_2913_976_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02.30201030310112312320111101112011121.003.2.21.22    38        
--
>891_795_64_F3	ENSMUST00000113126	-	2602	2629	11	38	50	160	4x1x1x3x3x7x9	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                           ||||XXX||X||X||||||X||||||||
T:               ----------TGTAgacAGaGGtGTGGTGtGGTGTCAG------------
R:         11   T23.12011333113033123203111011210111212.202.0.20312    38        
--
>892_854_4555_F3	ENSMUST00000113126	-	2590	2617	23	50	50	176	x12x4x3C8	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGGTAC    2590      
                                       X|||||||||||X|||X|| ||||||||
T:               ----------------------tGTGGTGTGGTGtCAGgGTCCTGGGTAC
R:         23   T23001010301301022213103111011110113212.21202100131    50        
--
>892_976_3286_F3	ENSMUST00000113126	-	2600	2620	21	41	50	180	15x6	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                     |||||||||||||||X|||||
T:               --------------------AGGTGTGGTGTGGTGtCAGGG---------
R:         21   T32130201030310112232320111101111011321.30211222333    41        
--
>892_3296_2581_F3	ENSMUST00000113126	-	2601	2620	21	40	50	170	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T30230201030310112332320111101112011121.23322223013    40        
--
>892_3378_1713_F3	ENSMUST00000113126	-	2600	2631	9	40	50	176	2x4x1G1x2x3x18	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                         ||X|||X |X|X||X|||||||||||||||||
T:               --------GGtGTAgGCaGaGGtGTGGTGTGGTGTCAGGG----------
R:          9   T31002010000113303223203111011110111212.13300030013    40        
--
>893_1171_1904_F3	ENSMUST00000113126	-	2601	2625	14	38	50	170	2x3x3x1x16	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                              ||X||X||XX|||||||||||||||
T:               -------------GAcAGaGGtgTGGTGTGGTGTCAGG------------
R:         14   T03.02013031311231232023110111101112120.0112322102.    38        
--
>895_986_3564_F3	ENSMUST00000113126	-	2602	2620	21	39	50	190	19	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||||||||||
T:               --------------------AGGTGTGGTGTGGTGTCAG-----------
R:         21   T02130201030310112312320111101111011121233332032030    39        
--
>895_1996_1416_F3	ENSMUST00000113126	-	2599	2620	21	42	50	160	11x6x1x4	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                     |||||||||||X|||||XX|||
T:               --------------------AGGTGTGGTGTgGTGTCagGGT--------
R:         21   T13130201032113312212320111101112011122300102020103    42        
--
>896_353_1816_F3	ENSMUST00000113126	-	2599	2626	14	41	50	176	1x8x10x4C4	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                              |X|||||||X|||||||||X||| ||||
T:               -------------AgACAGAGGtGTGGTGTGGtGTCCGGGT---------
R:         14   T10.02010333030021122203111011110311203.31320121102    41        
--
>896_1463_1722_F3	ENSMUST00000113126	+	2592	2620	10	38	50	156	2x7x1x2T10x2x4	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                          ||X||||||XX| ||||||||||X|X|||
T:               ---------ACcCAGCACccTTACACCACACCaCaCCT------------
R:         10   T13.02013301301231123203111011110013102.32113231223    38        
--
>896_1511_3206_F3	ENSMUST00000113126	-	2604	2625	16	37	50	180	2x14x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                ||X|||||||||||||X|||||
T:               ---------------GAcAGAGGTGTGGTGTgGTGTC-------------
R:         16   T02.30201030310112312220111101112011120.33301322032    37        
--
>896_3801_801_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T03.02010303131013123203111011110111220.33020223311    36        
--
>897_1620_1338_F3	ENSMUST00000113126	+	2383	2414	2	33	50	166	12x4x3x3G1x2x3x3	
G:       2383    CCTCATAGCAAGTATGATATGGTCAGCCTGCCTCTCTGACCTATCTCCAA    2414      
                  ||||||||||||X|||X||X|| |X|X||X||
T:               -CTCATAGCAAGTaTGAtATgGTGAgCcTGcCT-----------------
R:          2   T02221332310212312133301123312100212003.30313.00311    33        
--
>898_1853_5022_F3	ENSMUST00000113126	-	2596	2629	12	45	50	172	2x2x2T2x11x7C2x4	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                            ||X|X| ||X||||||||||X|||||| ||X|||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCACGGtGCT-----
R:         12   T02.30201030310302332320111101112011121130213223300    45        
--
>898_3864_3608_F3	ENSMUST00000113126	+	2596	2622	14	40	50	176	5x1x2T14x4	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                              |||||XX| ||||||||||||||X|||
T:               -------------AGCACccTTACACCACACCACACcTCT----------
R:         14   T13.10100221310231123203111011110111132223232122131    40        
--
>899_2050_3903_F3	ENSMUST00000113126	-	2600	2622	19	41	50	180	2x11x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGG---------
R:         19   T02.30201030310112332320111101112011121.30023.0221.    41        
--
>900_1004_3221_F3	ENSMUST00000113126	-	2601	2622	19	40	50	170	2x11x9	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                   ||X||||||||||X||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGG----------
R:         19   T00.30201330310212332320111101112011121.3231123312.    40        
--
>900_1783_4882_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	11x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||||||||||X||||||
T:               --------------------AGGTGTGGTGTgGTGTCA------------
R:         21   T02.30201230312012332320111101112011121.0033232310.    38        
--
>900_3350_1892_F3	ENSMUST00000113126	-	2606	2624	16	34	50	170	4x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                                ||||X||||||||||||||
T:               ---------------ACAGaGGTGTGGTGTGGTG----------------
R:         16   T33.02010303002311123201111011110112300.0332311232.    34        
--
>900_3384_3800_F3	ENSMUST00000113126	-	2604	2622	18	36	50	170	5x14	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  |||||X|||||||||||||
T:               -----------------AGAGGtGTGGTGTGGTGTC--------------
R:         18   T02.31202331300202322203111011110111201.1323002032.    36        
--
>900_3512_1381_F3	ENSMUST00000113126	-	2602	2625	14	37	50	180	2x3x3x16	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X|||||||||||||||
T:               -------------GAcAGaGGtGTGGTGTGGTGTCAG-------------
R:         14   T23.20102031310231232031110111101112123.3322322320.    37        
--
>900_3831_2346_F3	ENSMUST00000113126	-	2604	2623	17	36	50	200	20	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 ||||||||||||||||||||
T:               ----------------CAGAGGTGTGGTGTGGTGTC--------------
R:         17   T23.22010303101120122201111011110111203.2002302110.    36        
--
>901_1333_1548_F3	ENSMUST00000113126	-	2601	2620	21	40	50	170	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T02.30201030310002333320111101112011121.23210303331    40        
--
>901_3401_1812_F3	ENSMUST00000113126	-	2606	2629	11	34	50	180	2x2x5x15	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                           ||X|X||||X||||||||||||||
T:               ----------TGtAgACAGaGGTGTGGTGTGGTG----------------
R:         11   T23.02013303133321123201111011110112012.03113201331    34        
--
>903_2902_4447_F3	ENSMUST00000113126	+	1098	1118	9	29	50	170	9x7x5	
G:       1098    AGTTCTGCCTGGTTCGCGAGAACAGTTCAAGGGCAGACGGAGTTTTCGAG    1118      
                         |||||||||X||||||X||||
T:               --------CTGGTTCGCgAGAACAgTTCA---------------------
R:          9   T01.13222221010233222201111021103300130200221130323    29        
--
>903_4213_465_F3	ENSMUST00000113126	+	2591	2619	9	37	50	190	3x6x2x2x13x3	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                         |||X|||||X|X|X||||||||||||X||
T:               --------TACcCAGCAcCcTgACACCACACCACaCC-------------
R:          9   T23.02013031301231303202111011110112103013213021022    37        
--
>905_3664_2066_F3	ENSMUST00000113126	-	772	791	7	26	50	160	2x13x5	
G:        791    TGCATGCAGTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    772       
                       ||X||||||||||||X||||
T:               ------CAgTGGCGGAAAATCcGTGT------------------------
R:          7   T30.2101131103302000321311133123013123321120333.200    26        
--
>906_1737_3167_F3	ENSMUST00000113126	-	2601	2629	12	40	50	176	2x2x2T2x11x9	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                            ||X|X| ||X||||||||||X||||||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCAGG----------
R:         12   T02230201030310312332320111101112011121203033322132    40        
--
>906_2241_4035_F3	ENSMUST00000113126	-	2599	2626	15	42	50	166	1x2T2x11x2x9	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                               |X| ||X||||||||||X|X||||||||
T:               --------------AgATAGaGGTGTGGTGTgGtGTCAGGGT--------
R:         15   T02230201030310212332320111101112001121200100333233    42        
--
>908_3236_2125_F3	ENSMUST00000113126	-	2322	2336	1	15	50	150	15	
G:       2336    ACTGTCACACTATATAGGACGGGAGCCGAAGCTCAATGACAATGTCAGTG    2322      
                 |||||||||||||||
T:               ACTGTCACACTATAT-----------------------------------
R:          1   T31211211112333320203033311233232331110210110112312    15        
--
>908_3982_2195_F3	ENSMUST00000113126	-	2453	2478	9	34	50	166	x4x13x1A7	
G:       2478    GTTTGATGAGCAGCAGCAGCAGCGTCTGGCTCCAACTAAGAAGATCGACG    2453      
                         X|||X||||||||||||X |||||||
T:               --------aGCAgCAGCAGCAGCGTcAGGCTCCA----------------
R:          9   T31002010023133123123123310120322010002220323210003    34        
--
>909_2409_2764_F3	ENSMUST00000113126	-	2603	2629	12	38	50	176	2x2x2A2x18	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                            ||X|X| ||X|||||||||||||||||
T:               -----------TGtAgAAAGaGGTGTGGTGTGGTGTCA------------
R:         12   T02.20201030210302002020111101111011121.23020022002    38        
--
>909_2458_598_F3	ENSMUST00000113126	-	1695	1720	15	40	50	150	x3x10x7x2x4	
G:       1720    CTGTTACGAATCAGAGCAGCCTGTGCCTGCGGGTCTCGGCGCAGAAACCC    1695      
                               X||X|||||||||X||||||X|X|||
T:               --------------aGCaGCCTGTGCCtGCGGGTcTcGGC----------
R:         15   T33.02013303101223323021113031330011213.03231122011    40        
--
>910_1487_4643_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02120201030310312312320111101112011121.23313101001    38        
--
>910_2658_3042_F3	ENSMUST00000113126	+	1457	1478	15	36	50	160	2x1x4x15	
G:       1457    CTGTACTTCGAGTCCGACGCAGCCACAGTCAGTGAGATCGTGCTCAAGGT    1478      
                               ||XX|||X||||||||||||||
T:               --------------CGacGCAgCCACAGTCAGTGAG--------------
R:         15   T12000301131323233233113011121212112232.33203320202    36        
--
>910_3218_4737_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x8x10	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X|||||||X|||||||||
T:               ----------------CAGaGGTGTGGtGTGGTGTCA-------------
R:         17   T20322000303001002123201111001110111210.12200313222    37        
--
>911_1253_449_F3	ENSMUST00000113126	-	2382	2403	6	27	50	160	5x1x8x8	
G:       2403    CAGACCCATATCATACTTGCTATGAGGCATGGCCAGCGCCAGGGTGCAGG    2382      
                      |||||XX|||||||X|||||||
T:               -----CCATAtcATACTTGcTATGAGG-----------------------
R:          6   T02130201330313312012233122011210111130.20112331202    27        
--
>911_3679_4267_F3	ENSMUST00000113126	-	2593	2625	16	48	50	180	3x2x11x6x4x2x1x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                |||X|X||||||||||X|||||X|||X|XX|||
T:               ---------------GACaGaGGTGTGGTGTgGTGTCaGGGtGctGGG--
R:         16   T10130201030310112132320111101112011123.30211310032    48        
--
>912_1121_1084_F3	ENSMUST00000113126	-	2604	2623	18	37	50	160	1x2x17	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                  |X|X||||||||||||||||
T:               -----------------CaGaGGTGTGGTGTGGTGTC-------------
R:         18   T313302032300101123323201111011110111220230.3021021    37        
--
>912_1262_503_F3	ENSMUST00000113126	-	2595	2623	16	44	50	186	3x14T2x2x7	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATC    2595      
                                |||X||||||||||||| ||X|X||||||
T:               ---------------CAGaGGTGTGGTGTGGTTTCaGgGTGCTG------
R:         16   T130001012313132312320111101111010020230113.2320230    44        
--
>912_1699_2013_F3	ENSMUST00000113126	-	2603	2629	12	38	50	170	2x2x2x3x11x7	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                            ||X|X|X||X||||||||||X||||||
T:               -----------TGtAgAcAGaGGTGTGGTGTgGTGTCA------------
R:         12   T110302010303133123123201111011120111210203.0130232    38        
--
>912_3609_2075_F3	ENSMUST00000113126	+	2604	2623	22	41	50	160	14x2x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                      ||||||||||||||X|X|||
T:               ---------------------GACACCACACCACAcCtCTG---------
R:         22   T112020123203310221232021110111101113032213.0220232    41        
--
>915_1809_4750_F3	ENSMUST00000113126	-	2065	2098	15	48	50	200	3x8x9x1x2x6x5	
G:       2098    ATGGATTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTAG    2065      
                               |||X|||||||X||||||||XX|X|||||X||||
T:               --------------TGAgAGCTCCAaCCACAGCTttTgTAATCtGCCT--
R:         15   T23.00201030333312322322012101112323103.00320.30221    48        
--
>915_4071_2183_F3	ENSMUST00000113126	-	731	750	5	24	50	180	10x10	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    731       
                     ||||||||||X|||||||||
T:               ----CAATATGCAGgCAGTAGGCA--------------------------
R:          5   T13.20103331312231213203131011232112121.10120.33222    24        
--
>916_367_2868_F3	ENSMUST00000113126	+	2587	2620	5	38	50	166	x6x4x1x3G3x2x11x3	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                     X|||||X|||XX|| |||X|X||||||||||X||
T:               ----aAGGTAcCCAgcACGCTGaCaCCACACCACAcCT------------
R:          5   T23.32020133001311133211121011110111302323233131122    38        
--
>916_613_789_F3	ENSMUST00000113126	-	297	319	28	50	50	190	7x5x11	
G:        319    CATCCTTGGGCCAGGGCCACAGCCGATTCTAATCTTTGAGCTGTGTTTGA    297       
                                            |||||||X||||X||||||||||
T:               ---------------------------TCTAATCtTTGAgCTGTGTTTGA
R:         28   T30.31032303102312302313101112230323001233211110012    50        
--
>918_273_4613_F3	ENSMUST00000113126	-	2606	2629	12	35	50	160	2x2x8x8x4	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAA    2606      
                            ||X|X|||||||X|||||||X|||
T:               -----------TGtAgACAGAGGtGTGGTGTgGTG---------------
R:         12   T10.30201030310312112220311101113011310.00333232102    35        
--
>918_405_2755_F3	ENSMUST00000113126	-	2591	2625	14	48	50	206	2x6x14x2x5A2x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2591      
                              ||X|||||X|||||||||||||X|X|||| ||X||
T:               -------------GAcAGAGGtGTGGTGTGGTGTCaGgGTGCAGGgTA--
R:         14   T13.20103031300231222031110111101112021.01312011331    48        
--
>918_442_520_F3	ENSMUST00000113126	-	2066	2095	13	42	50	176	5T2x9x7x1x5	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATCTGCCGAGATCTT    2066      
                             ||||| ||X||||||||X||||||XX||||
T:               ------------GAGCTTCAaCCACAGCTtTTGTAAtcTGCC--------
R:         13   T00.33031111202232021110111232200113000.33010332123    42        
--
>919_769_3849_F3	ENSMUST00000113126	-	2601	2624	19	42	50	180	x6x9x9	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                   X|||||X||||||||X||||||||
T:               ------------------aCAGAGgTGTGGTGTgGTGTCAGG--------
R:         19   T121233022103031310311222311110111201112120.3332002    42        
--
>922_245_2744_F3	ENSMUST00000113126	-	2068	2099	9	40	50	176	1x3x6x2x8x4A7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X|||||X|X|||||||X||| |||||||
T:               --------CtGAgAGCTCcAaCCACAGCtTTTATAATCTG----------
R:          9   T00133031111202232211310111231000333032.120.2001233    40        
--
>922_3808_2876_F3	ENSMUST00000113126	+	2625	2641	7	23	50	150	13x4	
G:       2625    CTCTGTCTACACCAGATGCCTCTGCAGACCTCACCATGGTCCCGCCTGTG    2641      
                       |||||||||||||X|||
T:               ------CTACACCAGATGCcTCT---------------------------
R:          7   T23002012311101223133222223003133130100.101.1202210    23        
--
>923_1136_1687_F3	ENSMUST00000113126	-	1174	1199	5	30	50	160	x12x2x6x1x5	
G:       1199    GAGGCTTGTAATGGTGGCTGCTAAGCATATCTGCCTGGCAGTCCCAGCAA    1174      
                     X|||||||||||X|X|||||XX||||
T:               ----cTTGTAATGGTGgCtGCTAAgcATAT--------------------
R:          5   T02130201130310112331323011133312111122.212.3.02.10    30        
--
>923_2886_292_F3	ENSMUST00000113126	+	2598	2619	16	37	50	160	3x1x2x16	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                                |||XX|X|||||||||||||||
T:               ---------------CACccTgACACCACACCACACC-------------
R:         16   T23302010121303011123232111011110111103.120.2.13.03    37        
--
>924_1082_2543_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	11x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||||||||||X||||||
T:               --------------------AGGTGTGGTGTgGTGTCA------------
R:         21   T02130201030310312332320111101112011121.33203101311    38        
--
>924_2847_2013_F3	ENSMUST00000113126	-	2604	2628	12	36	50	170	2x3x3x3x14	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                            ||X||X||X||X|||||||||||||
T:               -----------GTaGAcAGaGGtGTGGTGTGGTGTC--------------
R:         12   T32102010303212222123203111011110111202.32203220131    36        
--
>925_3910_362_F3	ENSMUST00000113126	-	2071	2099	9	37	50	150	1x3x5x2x9x1x4x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||X|X||||||||XX|||X|||
T:               --------CtGAgAGCTcCaACCACAGCttTTGtAAT-------------
R:          9   T00133031111232232000010111233300133033.003.0332332    37        
--
>926_2203_2569_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	3x3x14x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGG----------
R:         17   T231020133002010201232031110111101112020021.2230.02    40        
--
>926_2376_1467_F3	ENSMUST00000113126	-	2602	2622	18	38	50	190	2x19	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||||||||||||||||||
T:               -----------------AGaGGTGTGGTGTGGTGTCAG------------
R:         18   T010020133030111232232011110111101112122002.0101.31    38        
--
>926_4189_1044_F3	ENSMUST00000113126	-	2599	2622	19	42	50	180	2x11x6x5	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                   ||X||||||||||X|||||X||||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGGGT--------
R:         19   T022302010303101123323201111011120111202001.3011.00    42        
--
>928_916_4509_F3	ENSMUST00000113126	+	2243	2264	10	31	50	160	1x4x9x8	
G:       2243    TGCGTGCGTGCGTGCGTGCGTGCGTGCGTAGCCTTCTAAGGCCTTCTCAA    2264      
                          |X|||X||||||||X|||||||
T:               ---------GcGTGcGTGCGTGCgTGCGTAG-------------------
R:         10   T203201000313112311331132113313223130022023.2112.10    31        
--
>928_4252_294_F3	ENSMUST00000113126	+	456	481	10	35	50	180	1x18x2x2x3	
G:        456    CCAAGTTCAGGCAAGCAGTCCATATTGTCTGTACGCCTGGAGCAGTGCCC    481       
                          |X|||||||||||||||||X|X|X||
T:               ---------GgCAAGCAGTCCATATTGTcTgTaCG---------------
R:         10   T130201030313102312120133301112010130232331.0011.10    35        
--
>929_3283_4372_F3	ENSMUST00000113126	-	2601	2620	21	40	50	170	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T02130201030310312332320111101112011121.232.1.32.13    40        
--
>929_4024_4888_F3	ENSMUST00000113126	-	2068	2099	9	40	50	170	1x3x5x1x2x13x3x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X||||||||||||X||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAtCTG----------
R:          9   T00133031111232232011110111232000103012.202.0.32.20    40        
--
>930_2248_2102_F3	ENSMUST00000113126	-	2600	2623	17	40	50	180	3x3x15x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X||||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAgGG----------
R:         17   T203020100000030301232031110111101112110002.2321.3.    40        
--
>931_2730_1646_F3	ENSMUST00000113126	-	2602	2625	16	39	50	180	3x13x1x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                |||X||||||||||||XX||||||
T:               ---------------GACaGAGGTGTGGTGTggTGTCAG-----------
R:         16   T023302010303100121322201111011121111212332.2232.31    39        
--
>931_3673_2579_F3	ENSMUST00000113126	+	2587	2628	5	46	50	182	x5x3G1x1x2x1G12x8x1x6	
G:       2587    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                     X||||X|| |XX|X ||||||||||||X|||||||XX|||||
T:               ----aAGGTaCCGAgcAcGCTGACACCACACcACACCTCtgTCTAC----
R:          5   T332330201010323112332121110111111111022021.2313.03    46        
--
>932_3501_3702_F3	ENSMUST00000113126	-	2592	2623	18	49	50	160	x3x11x7x3x3x1x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                                  X||X||||||||||X||||||X||X||XX|||
T:               -----------------cAGaGGTGTGGTGTgGTGTCAgGGtGCtgGGT-
R:         18   T02230201330310312212320111101112011121.202.2020012    49        
--
>933_325_391_F3	ENSMUST00000113126	-	281	305	23	47	50	170	6x2x3x1x13	
G:        305    CAGCCGATATCTTATACGACCTTGTGTTTGAGCGTCTTCTAATACCATGT    281       
                                       ||||||X|X||XX||||||||||||
T:               ----------------------TGTGTTtGaGCgtCTTCTAATACCA---
R:         23   T02330201030313112312320111102112303220223033101.00    47        
--
>933_3955_3931_F3	ENSMUST00000113126	-	928	961	12	45	50	186	2x5x14C3x2x1x1x5	
G:        961    TCTGTTCCCATAAGATCTCCTTCATGGTGACCTTTGTGTTGTCTAGCTCT    928       
                            ||X||||X||||||||||||| |||X|XXX||||
T:               -----------AAgATCTcCTTCATGGTGACCCTTGtGttgTCTA-----
R:         12   T30120103031301232230202131011210020101213122320.01    45        
--
>934_619_4563_F3	ENSMUST00000113126	-	2603	2629	12	38	50	156	2x2x2T2x11x7	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                            ||X|X| ||X||||||||||X||||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCA------------
R:         12   T02230201030310312332320111101112011121.30200013021    38        
--
>934_765_4768_F3	ENSMUST00000113126	-	731	754	1	24	50	160	x4x4x6x10	
G:        754    TCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    731       
                 X|||X|||X|||||X|||||||||
T:               tCAGcAATaTGCAGgCAGTAGGCA--------------------------
R:          1   T12120103031312231213203131011230121102.00102220123    24        
--
>934_1489_471_F3	ENSMUST00000113126	-	729	753	2	26	50	150	x3x8x2x6x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGCGCCTGTGATCTGAGAGACAGGT    729       
                  X||X|||||||X|X|||||X|||||
T:               -cAGcAATATGCaGgCAGTAgGCACT------------------------
R:          2   T11120103331332231213103112331210010202.01322212323    26        
--
>934_2558_313_F3	ENSMUST00000113126	-	1932	1950	16	34	50	170	3x16	
G:       1950    ACCTGGAGAGCACGCAGAGAAATGTACACTTTTGGGAGTTCTGCCTGGTT    1932      
                                |||X|||||||||||||||
T:               ---------------AGAgAAATGTACACTTTTG----------------
R:         16   T31020103031310232232003113111200012032.13010022322    34        
--
>934_3024_2941_F3	ENSMUST00000113126	-	2604	2629	12	37	50	166	2x2x2T2x17	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                            ||X|X| ||X||||||||||||||||
T:               -----------TGtAgATAGaGGTGTGGTGTGGTGTC-------------
R:         12   T02230201030310302332320111101111011123.20323322123    37        
--
>934_3186_3416_F3	ENSMUST00000113126	-	2594	2612	19	37	50	170	13x6	
G:       2612    ACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGAAATCCCTCAAAG    2594      
                                   |||||||||||||X|||||
T:               ------------------TGTGGTGTCAGGGtGCTGG-------------
R:         19   T02333031111222232031110111212000132103.30333333130    37        
--
>934_3504_2865_F3	ENSMUST00000113126	-	2601	2629	10	38	50	190	1x2x3x3x3x17	
G:       2629    AATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                          |X|X||X||X||X||||||||||||||||
T:               ---------TgTaGAcAGaGGtGTGGTGTGGTGTCAGG------------
R:         10   T23100210303122231232031110111101112120.30022012131    38        
--
>935_1764_4166_F3	ENSMUST00000113126	-	2602	2622	18	38	50	170	2x13x6	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                  ||X||||||||||||X|||||
T:               -----------------AGaGGTGTGGTGTGGtGTCAG------------
R:         18   T01002013300111323223201111011110011212.032.2221.3.    38        
--
>937_252_5051_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	2x2x17	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||X|X||||||||||||||||
T:               ---------------ACaGaGGTGTGGTGTGGTGTC--------------
R:         16   T23102010303102031223201111011110111201.302..013.0.    36        
--
>937_1418_3477_F3	ENSMUST00000113126	-	2604	2622	19	37	50	170	13x6	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                   |||||||||||||X|||||
T:               ------------------AGAGGTGTGGTGTgGTGTC-------------
R:         19   T02330201030313312332220111101112011120.331..333.3.    37        
--
>938_1269_4902_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x7x2x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||X|X||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAA--------------
R:          9   T00133031111222232031110111202100113001.200.2.11.32    36        
--
>938_3006_1584_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x11x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAA--------------
R:          9   T00133031111222232011110111232003133010.310.3.12.01    36        
--
>938_3645_3322_F3	ENSMUST00000113126	-	1433	1452	17	36	50	160	3x2x15	
G:       1452    CAAAGAAAACTGAACACGAAGTACAGGTGCTTGTAGCAGAAGGAGAAGAA    1433      
                                 |||X|X||||||||||||||
T:               ----------------CGAaGtACAGGTGCTTGTAG--------------
R:         17   T33032010003101023323203112011320113202.021.2.23.30    36        
--
>939_1005_4384_F3	ENSMUST00000113126	-	2601	2624	16	39	50	180	4x3x12x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                ||||X||X|||||||||||X||||
T:               ---------------ACAGaGGtGTGGTGTGGTGtCAGG-----------
R:         16   T2330221032102121112320311101111011221202332.212222    39        
--
>939_1114_1306_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||||||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T0013303111122223203111011123200013303302122.312330    37        
--
>939_1472_2474_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T2310201031010203312320311101111011110222222.231323    40        
--
>939_1778_1233_F3	ENSMUST00000113126	-	2592	2615	15	38	50	180	1x15x3x5	
G:       2615    CAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAGA    2592      
                               |X||||||||||||||X||X||||
T:               --------------TgGTGTGGTGTCAGGGtGCtGGGT------------
R:         15   T0103032111232232011110111212000130100110302.011322    38        
--
>939_1975_4271_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T2310201030323332312320311101111011110222313.300031    40        
--
>939_3588_758_F3	ENSMUST00000113126	-	1915	1937	18	40	50	170	3x7x9x4	
G:       1937    ACGCTGGAGAGCCAGAACTTTTGTTCTTTGTTTGCTTTAAGCGAGAACAG    1915      
                                  |||X||||||X||||||||X|||
T:               -----------------CTTtTGTTCTtTGTTTGCTtTAA----------
R:         18   T2330201030313112122010110223011001322030022.321221    40        
--
>939_3908_625_F3	ENSMUST00000113126	-	2601	2625	16	40	50	190	2x3x15x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                ||X||X||||||||||||||X||||
T:               ---------------GAcAGaGGTGTGGTGTGGTGtCAGG----------
R:         16   T0233020103031331231232011110111101102120300.311121    40        
--
>940_1504_980_F3	ENSMUST00000113126	-	2603	2620	20	37	50	160	x18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    X|||||||||||||||||
T:               -------------------aGGTGTGGTGTGGTGTCA-------------
R:         20   T01002013200013332223201111011110111211.331.3232.13    37        
--
>940_2618_1346_F3	ENSMUST00000113126	-	2602	2625	13	36	50	160	2x3x3x8x8	
G:       2625    ATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCC    2602      
                             ||X||X||X|||||||X|||||||
T:               ------------GAcAGaGGtGTGGTGTgGTGTCAG--------------
R:         13   T20211030013112312320311101113011121232.323.2221.32    36        
--
>940_3621_2234_F3	ENSMUST00000113126	-	2596	2617	21	42	50	170	16x2x4	
G:       2617    ATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTAAAAATCC    2596      
                                     ||||||||||||||||X|X|||
T:               --------------------TGTGGTGTGGTGTCAGgGtGCT--------
R:         21   T30301030313112312310311101111011121220.132.2321.32    42        
--
>941_670_3389_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T2330201030030112112320311101111011120233232.232...    36        
--
>941_1099_3927_F3	ENSMUST00000113126	+	617	656	7	46	50	162	1x4x2x1x2x6x10G2T3x1x6	
G:        617    CAGACTGCTGCCAATGACCGTGGTGACCATGGCCAGCGCCAGGGTGCAGG    656       
                       |X|||X|XX|X|||||X||||||||| || |||XX|||||
T:               ------GcTGCcAatGaCCGTGgTGACCATGGGCATCGCcaGGGTG----
R:          7   T0113130221331201010311311210131003132332220.310...    46        
--
>941_2380_3723_F3	ENSMUST00000113126	-	2604	2627	13	36	50	160	2x4x1x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X|||XX||X|||||||||||||
T:               ------------TAgACAgaGGtGTGGTGTGGTGTC--------------
R:         13   T2330201330010332111320311101111011120233303.222...    36        
--
>941_2833_792_F3	ENSMUST00000113126	-	2602	2623	18	39	50	180	3x11x8	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                  |||X||||||||||X|||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAG-----------
R:         18   T0233020103031311231232011110111201112123332.202...    39        
--
>942_986_3693_F3	ENSMUST00000113126	-	2596	2614	16	34	50	170	15x4	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTAAAAATCCCTCAAAGA    2596      
                                |||||||||||||||X|||
T:               ---------------GGTGTGGTGTCAGGGtGCT----------------
R:         16   T01030311112322320111101112120001323300303023123.2.    34        
--
>942_2807_1465_F3	ENSMUST00000113126	-	80	114	12	46	50	176	4x3x2x2x13x1G3x3x3	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    80        
                            ||||X||X|X|X||||||||||||X |||X||X||
T:               -----------CATCaCTgGtCaCGTGTGACTGTCgGATAtGAgCT----
R:         12   T23302010231313231230222131111212112102330120320.2.    46        
--
>943_668_878_F3	ENSMUST00000113126	-	2074	2095	12	33	50	180	5x3x14	
G:       2095    TCTCCCTTATCGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTTG    2074      
                            |||||X||X|||||||||||||
T:               -----------GAGCTcCAaCCACAGCTTTTGT-----------------
R:         12   T010303011123223200111011123200011033302232..313...    33        
--
>943_1755_4711_F3	ENSMUST00000113126	-	2601	2625	16	40	50	190	2x3x11x9	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                ||X||X||||||||||X||||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAGG----------
R:         16   T021302010303131123123201111011120111212033..303...    40        
--
>943_2238_1698_F3	ENSMUST00000113126	-	2063	2099	9	45	50	170	1x3x5x1x2x11x2x5x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTATCTT    2063      
                         |X||X||||XX|X||||||||||X|X||||X|X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAATCtGcCTGT-----
R:          9   T001330311112322320311101112320011330320120..212...    45        
--
>943_3603_606_F3	ENSMUST00000113126	-	718	746	9	37	50	170	6x10x1x2x2x3x5	
G:        746    CCTTCTAAATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                         ||||||X|||||||||XX|X|X||X||||
T:               --------ATGCAGgCAGTAGGCActGaCaTTgTCAT-------------
R:          9   T031201130313122312132031331112302121310131..222...    37        
--
>944_774_2771_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T010020130031121232232011110111101112022202..001.2.    36        
--
>944_779_1153_F3	ENSMUST00000113126	-	2067	2099	9	41	50	190	1x8x1x2x7x9x1x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCGGAGATCTT    2067      
                         |X|||||||XX|X||||||X||||||||XX|||
T:               --------CtGAGAGCTccAaCCACAGcTTTTGTAAtcTGC---------
R:          9   T001330311112222320311101112020001130212131..311.3.    41        
--
>944_872_1412_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x12x4	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X|||||||||||X|||
T:               ------------GAGCTccAaCCACAGCTTTTgTAA--------------
R:         13   T001330311112122320311101112320000130033303..300.3.    36        
--
>944_2250_3873_F3	ENSMUST00000113126	-	2606	2625	15	34	50	160	5x3x12	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||X|||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTG----------------
R:         15   T010020133031010211232031110111101122021101..232.3.    34        
--
>944_2350_3237_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T112020103031312131232031110111101112122031..332.2.    38        
--
>944_2634_4019_F3	ENSMUST00000113126	-	710	750	5	45	50	196	4x6x10x2x1x2x1x5T2x7	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCCAGGT    710       
                     ||||X|||||X|||||||||X|XX|XX|||| ||X||||||
T:               ----CAATaTGCAGgCAGTAGGCAcTgaCatTGTCTTTgAGCTTC-----
R:          5   T110201030313122312132031220112101122002223..000.3.    45        
--
>944_3113_2714_F3	ENSMUST00000113126	-	730	750	5	25	50	170	4x6x11	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||X|||||X||||||||||
T:               ----CAATaTGCAGgCAGTAGGCAC-------------------------
R:          5   T233001030313122312132031110123020133112232..323.1.    25        
--
>945_1101_2586_F3	ENSMUST00000113126	-	91	114	12	35	50	160	4x3x2x2x13	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                            ||||X||X|X|X||||||||||||
T:               -----------CATCaCTgGtCaCGTGTGACTGTC---------------
R:         12   T23302310131313231230223131111212112001.030...11.30    35        
--
>945_2620_3888_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	5x3x10x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||||X||X|||||||||X|X|||
T:               --------------GACAGaGGtGTGGTGTGGtGtCAG------------
R:         15   T23302010300333021123203111011110310212.302...21.32    38        
--
>945_2940_4437_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	1x4x3x10x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |X|||X||X|||||||||X|||||
T:               --------------GaCAGaGGtGTGGTGTGGtGTCAG------------
R:         15   T03102010001001031123203111011110011212.330...23.23    38        
--
>946_586_3185_F3	ENSMUST00000113126	-	2606	2625	15	34	50	160	5x3x12	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||X|||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTG----------------
R:         15   T21302010303333121123203111011110113222.231.300132.    34        
--
>946_4187_2190_F3	ENSMUST00000113126	-	2060	2099	9	48	50	186	1x3x5x1x2x12x5T3x3x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X|||||||||||X|||| |||X||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAATTTGCcTGtTCA--
R:          9   T00133031111232232031110111232000013030.233.120212.    48        
--
>947_708_2218_F3	ENSMUST00000113126	+	2591	2622	9	40	50	166	x3x8x1x1T10x2x6	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                         X||X|||||||XX ||||||||||X|X|||||
T:               --------tACcCAGCACCctTACACCACACCaCaCCTCT----------
R:          9   T12120103031301231103303111011110310102220301012133    40        
--
>948_2636_37_F3	ENSMUST00000113126	-	2068	2099	9	40	50	170	1x3x5x1x2x11x2x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X||X||||XX|X||||||||||X|X||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAATCTG----------
R:          9   T00133031111232232031110111232003123032.311...2222.    40        
--
>949_1433_3455_F3	ENSMUST00000113126	-	708	750	5	47	50	172	x14x2x5x2x2T2A3x4x2x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCGGGGT    708       
                     X|||||||||||||X|X||||X|X| || |||X|||X|X||||
T:               ----cAATATGCAGGCAGtAgGCACtGaCTTTATCAtTGAgCtTCGG---
R:          5   T10020103331312031223103111111200332120.303..2300..    47        
--
>950_2700_848_F3	ENSMUST00000113126	-	546	567	20	41	50	180	15x4x3	
G:        567    CCTCTTACCGGTGCCTGCTTTGCAGTTGTACCCACATGACCCTGCTGCTG    546       
                                    |||||||||||||||X|||X||
T:               -------------------TTGCAGTTGTACCCAcATGaCC---------
R:         20   T100201030313132312330131210113100121313103.3.323..    41        
--
>951_3564_4815_F3	ENSMUST00000113126	-	2599	2625	16	42	50	170	2x3x11x6x1x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||X||X||||||||||X|||||XX|||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCagGGT--------
R:         16   T023302010303133123121201111011120111200001..220...    42        
--
>952_2304_4601_F3	ENSMUST00000113126	-	2597	2622	18	43	50	160	2x3x8x8x2x3	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                  ||X||X|||||||X|||||||X|X||
T:               -----------------AGaGGtGTGGTGTgGTGTCAGgGtGC-------
R:         18   T23302010303131121323203111011120111212303133222.00    43        
--
>952_3734_562_F3	ENSMUST00000113126	-	2602	2621	19	38	50	160	1x3x16	
G:       2621    AAATTCTAAACAATCAGCGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                   |X||X|||||||||||||||
T:               ------------------GaGGtGTGGTGTGGTGTCAG------------
R:         19   T23302010300301023113203111011110111212302310230.03    38        
--
>953_250_2657_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||||X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T001330311112222320111101112320001030001202..3112..    36        
--
>953_2217_1793_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	x6x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              X|||||X||X|||||||||||||
T:               -------------aGACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T211020103012302211232031110111101112022203..3323..    36        
--
>954_592_1578_F3	ENSMUST00000113126	-	2073	2099	9	35	50	170	1x4x2x2x1x17	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                         |X|||X|X|XX||||||||||||||||
T:               --------CtGAGaGcTccAACCACAGCTTTTGTA---------------
R:          9   T00123131111223202011010111232000113101.000..3301..    35        
--
>954_957_2676_F3	ENSMUST00000113126	-	2072	2095	13	36	50	180	5x1x2x16	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X|||||||||||||||
T:               ------------GAGCTccAaCCACAGCTTTTGTAA--------------
R:         13   T00133031111212232031110111232000113003.203..3022..    36        
--
>954_2944_1682_F3	ENSMUST00000113126	-	2597	2620	19	42	50	170	3x10x6x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||||X|||||X||||
T:               ------------------AGGtGTGGTGTGGtGTCAGgGTGC--------
R:         19   T13020103031310231232031110111102112123.213..1031..    42        
--
>954_3866_2538_F3	ENSMUST00000113126	-	2602	2623	16	37	50	160	3x3x12x4	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||X|||||||||||X|||
T:               ---------------CAGaGGtGTGGTGTGGTGtCAG-------------
R:         16   T10320103031311231232031110111101122121.333..2112..    37        
--
>954_4083_1582_F3	ENSMUST00000113126	+	2672	2693	7	28	50	160	1x3x11x7	
G:       2672    GTGGCAGCATCCTTGGGCCAGGGCCACAGCCGATATCTTATACGACCTGT    2693      
                       |X||X||||||||||X||||||
T:               ------GcATcCTTGGGCCAGgGCCACA----------------------
R:          7   T31223331131020100301220301111031110112.322..3020..    28        
--
>955_455_3749_F3	ENSMUST00000113126	+	2622	2644	28	50	50	170	3x11x2x7	
G:       2622    CAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGCCTCTGCA    2644      
                                            |||X||||||||||X|X||||||
T:               ---------------------------TGTcTACACCAGATgCcTCTGCA
R:         28   T31130201030313132311223311311132311101223333222131    50        
--
>955_1016_1822_F3	ENSMUST00000113126	+	2596	2617	14	35	50	166	6x2T13	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2617      
                              ||||||X| |||||||||||||
T:               -------------AGCACCcTTACACCACACCACA---------------
R:         14   T33120103031312231103203111011110111303200102223320    35        
--
>955_1097_3186_F3	ENSMUST00000113126	-	1594	1619	23	48	50	186	4x5G6x10	
G:       1619    AGGAGAAGAGCCCCAGTCACGCGTGTCACTGCTGCCCTGATTTCTTCTGC    1594      
                                       ||||X|||| ||||||X|||||||||
T:               ----------------------GTGTcACTGGTGCCCTgATTTCTTCT--
R:         23   T20102010000303300113203111011210113002323002202201    48        
--
>955_1727_3993_F3	ENSMUST00000113126	+	2602	2628	20	46	50	190	7x11x3x1x5	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                    |||||||X||||||||||X||XX||||
T:               -------------------CTGACACcACACCACACCtCTgtCTAC----
R:         20   T00303031111202233311212111211110111103220322312322    46        
--
>955_2867_2080_F3	ENSMUST00000113126	-	1431	1463	6	38	50	162	2x2G3x3x1x2T1x17	
G:       1463    CAAAGTGCGTCGGACTCGAAGTACAGGTGCTTGTAGTCGAAGGAGAAGAA    1431      
                      ||X| |||X||XX| |X||||||||||||||||
T:               -----TGcGGCGGaCTcgATGtACAGGTGCTTGTAGTC------------
R:          6   T23302010303303121123103112011320113212003332222133    38        
--
>955_2989_1564_F3	ENSMUST00000113126	-	2602	2620	25	43	50	170	11x8	
G:       2620    GAAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAA    2602      
                                         |||||||||||X|||||||
T:               ------------------------AGGTGTGGTGTgGTGTCAG-------
R:         25   T33123233020103031013231232011110111201112122333222    43        
--
>955_3777_1155_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02330201030313312312320111101112011121330321330122    38        
--
>956_531_4863_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	x8x1x2x12x4	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          X|||||||XX|X|||||||||||X|||
T:               ---------tGAGAGCTccAaCCACAGCTTTTgTAA--------------
R:         10   T00133231111222232031110111232000313002.003...300..    36        
--
>956_795_4177_F3	ENSMUST00000113126	-	2602	2625	15	38	50	166	3x1T12x7	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               |||X ||||||||||||X||||||
T:               --------------GACaTAGGTGTGGTGTGgTGTCAG------------
R:         15   T01002013303111121233201111011112111212.333...012..    38        
--
>956_1015_3035_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	2x5x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X||||X||X|||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T23302010301303021123203111011110111230.202...321..    36        
--
>956_2113_3952_F3	ENSMUST00000113126	-	2604	2631	9	36	50	166	3T2x5x3x2x12	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                         ||| ||X||||X||X|X|||||||||||
T:               --------GGTTTAgACAGaGGtGtGGTGTGGTGTC--------------
R:          9   T13302010301003121123203101011110111201.332...212..    36        
--
>957_1077_4630_F3	ENSMUST00000113126	-	2059	2089	19	49	50	170	2x9x8x1x1x6x4	
G:       2089    TTCTCCCTTATCCAAGTACAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2059      
                                   ||X||||||||X|||||||XXX|||||X|||
T:               ------------------CAaCCACAGCTtTTGTAATctgCCTGTtCAA-
R:         19   T001330311112312320311101112323001130310230..01210.    49        
--
>957_2015_1880_F3	ENSMUST00000113126	-	721	750	5	34	50	160	x4x6x10x1x2x2x5	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    721       
                     X|||X|||||X|||||||||XX|X|X||||
T:               ----cAATaTGCAGgCAGTAGGCActGaCaTTGT----------------
R:          5   T112201030313122312132031331112301131012210..33310.    34        
--
>957_2201_1097_F3	ENSMUST00000113126	-	2591	2626	13	48	50	220	x3x3x3x8x8x11	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2591      
                             X||X||X||X|||||||X|||||||X||||||||||
T:               ------------aGAcAGaGGtGTGGTGTgGTGTCAGgGTGCTGGGTA--
R:         13   T130201030313122312320311101112011121210113..30130.    48        
--
>957_2344_862_F3	ENSMUST00000113126	-	2602	2631	9	38	50	180	2x3x1x5x3x8x8	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                         ||X||XX||||X||X|||||||X|||||||
T:               --------GGtGTagACAGaGGtGTGGTGTgGTGTCAG------------
R:          9   T010020103031111211212031110111201112122031..21203.    38        
--
>957_2499_950_F3	ENSMUST00000113126	+	2586	2616	4	34	50	168	1x4x5C4G2T12	
G:       2586    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                    |X|||X|||| |||| || ||||||||||||
T:               ---CaAGGtACCCCGCACGCTTACACCACACCAC----------------
R:          4   T310030203310003311332031110111101121323200..03232.    34        
--
>957_3143_3923_F3	ENSMUST00000113126	-	2600	2624	16	40	50	170	1x3x3x13x5	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                |X||X||X||||||||||||X||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTcAGGG----------
R:         16   T231020103023010321232031110111101113120033..20111.    40        
--
>957_3470_2304_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	3x3x13x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X||||||||||||X||
T:               ----------------CAGaGGtGTGGTGTGGTGTcAG------------
R:         17   T233023103203010031232031110111101113122310..02313.    38        
--
>957_3639_2802_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	3x11x7	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||X||||||||||X||||||
T:               -------------------AGGtGTGGTGTGGTgTCAGGG----------
R:         20   T331020103333003011132021110111101012120002..33023.    40        
--
>958_1891_3479_F3	ENSMUST00000113126	-	2595	2620	20	45	50	180	14x2x3x7	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                    ||||||||||||||X|X||X||||||
T:               -------------------AGGTGTGGTGTGGTgTcAGgGTGCTG-----
R:         20   T013303131123223201132011110111101011122011..1203..    45        
--
>958_2202_1428_F3	ENSMUST00000113126	+	2605	2623	23	41	50	170	13x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||X|||||
T:               ----------------------ACACCACACCACAcCTCTG---------
R:         23   T333020103030032101232231110111101110022213..3311..    41        
--
>959_2639_2651_F3	ENSMUST00000113126	-	2601	2623	19	41	50	170	3x3x8x9	
G:       2623    AGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAA    2601      
                                   |||X||X|||||||X||||||||
T:               ------------------CAGaGGtGTGGTGTgGTGTCAGG---------
R:         19   T332330201030313112312320311101110011121202...10...    41        
--
>959_3012_356_F3	ENSMUST00000113126	-	2603	2625	15	37	50	156	2x2T3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X| |||X||||||||||||||
T:               --------------GAcATAGGtGTGGTGTGGTGTCA-------------
R:         15   T233020323031230231332031110111101112103030...13...    37        
--
>960_630_3874_F3	ENSMUST00000113126	-	2593	2624	16	47	50	170	1x3x3x14x3x2x6	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                |X||X||X|||||||||||||X||X|X|||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTCaGGgTgCTGGG---
R:         16   T231020122213010131232031110111101112020112...30...    47        
--
>960_1718_3161_F3	ENSMUST00000113126	-	2608	2629	11	32	50	160	4x2x6x10	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGCACTGTTTGAAAAAAAAT    2608      
                           ||||X|X|||||X|||||||||
T:               ----------TGTAgAcAGAGGtGTGGTGTGG------------------
R:         11   T233320101031133231222031110111103203112020...00...    32        
--
>960_1721_3231_F3	ENSMUST00000113126	-	2605	2625	16	36	50	170	2x14x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAA    2605      
                                ||X|||||||||||||X||||
T:               ---------------GAcAGAGGTGTGGTGTgGTGT--------------
R:         16   T021302010303131123122201111011120111113020...33...    36        
--
>960_2295_2822_F3	ENSMUST00000113126	+	2594	2621	12	39	50	172	x7G2T10x7	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                            X|||||| || ||||||||||X||||||
T:               -----------cCAGCACGCTTACACCACACCaCACCTC-----------
R:         12   T233020103032012311332031110111100111022302...23...    39        
--
>960_2845_257_F3	ENSMUST00000113126	-	2599	2620	20	41	50	200	13x9	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                    |||||||||||||X||||||||
T:               -------------------AGGTGTGGTGTGGtGTCAGGGT---------
R:         20   T233020103031021111232011110111103112120010...03...    41        
--
>960_3070_2677_F3	ENSMUST00000113126	-	719	752	3	36	50	180	2x4x6x11x1x1x2x1x6	
G:        752    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                   ||X|||X|||||X||||||||||XXX|XX|||||
T:               --AGcAATaTGCAGgCAGTAGGCACtgaCatTGTCA--------------
R:          3   T012201030313122312132031110112101121111212...22...    36        
--
>961_3200_1052_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T331020103030330211232031110111101112012011.2.21.02    36        
--
>962_828_3458_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23302010301000302123203111011110111202.133...22011    36        
--
>962_900_3544_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23202010320203121123203111011110111201.232...01331    36        
--
>962_1779_3406_F3	ENSMUST00000113126	-	2600	2625	17	42	50	170	2x3x3x14x4	
G:       2625    AGAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAA    2600      
                                 ||X||X||X|||||||||||||X|||
T:               ----------------GAcAGaGGtGTGGTGTGGTGTCaGGG--------
R:         17   T31233022133030311231232031110111101112.300...30133    42        
--
>962_1981_1901_F3	ENSMUST00000113126	-	2593	2619	21	47	50	170	15x3x3x6	
G:       2619    AAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                     |||||||||||||||X||X||X|||||
T:               --------------------GGTGTGGTGTGGTGTcAGgGTgCTGGG---
R:         21   T33302010300101030313001111011110111012.012...30030    47        
--
>962_2407_1351_F3	ENSMUST00000113126	-	2604	2626	14	36	50	190	6x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              ||||||X||X|||||||||||||
T:               -------------AGACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T20102010201000221123203111011110111201.200...22210    36        
--
>962_2470_2942_F3	ENSMUST00000113126	+	2596	2629	14	47	50	200	5x1x1x2x12x13	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2629      
                              |||||XXX|X|||||||||||X||||||||||||
T:               -------------AGCACcctGaCACCACACCACaCCTCTGTCTACA---
R:         14   T23101010031313231113013111011110112102.211...01200    47        
--
>962_2628_1954_F3	ENSMUST00000113126	-	2600	2627	13	40	50	176	3x4x3x13A4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                             |||X|||X||X|||||||||||| ||||
T:               ------------TAGaCAGaGGtGTGGTGTGGTGTAAGGG----------
R:         13   T23102010300003201123203111011110111302.000...13110    40        
--
>962_2888_1468_F3	ENSMUST00000113126	-	2591	2617	23	49	50	176	14x1T11	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGGTAT    2591      
                                       ||||||||||||||X |||||||||||
T:               ----------------------TGTGGTGTGGTGTCaTGGTGCTGGGTA-
R:         23   T02300013300303012013203111011110111203.011...00132    49        
--
>962_4251_4645_F3	ENSMUST00000113126	-	2604	2623	18	37	50	160	3x11x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                  |||X||||||||||X|||||
T:               -----------------CAGaGGTGTGGTGTgGTGTC-------------
R:         18   T02330201030313112312120111101112011120.300...22301    37        
--
>963_3379_1028_F3	ENSMUST00000113126	-	2600	2623	17	40	50	170	3x3x12x6	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||X|||||
T:               ----------------CAGaGGtGTGGTGTGGTGtCAGGG----------
R:         17   T31002010301033032123203111011110113212.030..332..3    40        
--
>963_3481_4292_F3	ENSMUST00000113126	-	719	753	2	36	50	216	3x4x5A11x2x5x4	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |||X|||X|||| |||||||||||X|X||||X|||
T:               -CAGcAATaTGCAAGCAGTAGGCACtGaCATTgTCA--------------
R:          2   T20120103031310231213203113111130012113.130..113..0    36        
--
>964_377_3218_F3	ENSMUST00000113126	-	2605	2624	16	35	50	180	4x16	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                                ||||X|||||||||||||||
T:               ---------------ACAGaGGTGTGGTGTGGTGT---------------
R:         16   T323010103223010011232011110111101111022332...32.31    35        
--
>964_483_1681_F3	ENSMUST00000113126	+	2597	2620	15	38	50	160	5x1x2x12x4	
G:       2597    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                               |||||XX|X|||||||||||X|||
T:               --------------GCACCctGaCACCACACCACaCCT------------
R:         15   T233020133013031311033131110111101131023011...22.01    38        
--
>964_1262_2482_F3	ENSMUST00000113126	-	2602	2625	16	39	50	160	x5x3x8x8	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                X||||X||X|||||||X|||||||
T:               ---------------gACAGaGGtGTGGTGTgGTGTCAG-----------
R:         16   T023302010303131121123203111011120111212233...13.32    39        
--
>964_1482_4771_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T231020203202031211232031110111101112002000...22.03    36        
--
>964_2347_1636_F3	ENSMUST00000113126	-	2600	2627	13	40	50	160	2x2x3x3x13x2x3	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                             ||X|X||X||X||||||||||||X|X||
T:               ------------TAgAcAGaGGtGTGGTGTGGTGTcAgGG----------
R:         13   T100300103333333231232031110111101113100023...31.32    40        
--
>964_2416_4838_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	1x2x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |X|X||X|||||||||||||||
T:               ----------------CaGaGGtGTGGTGTGGTGTCAG------------
R:         17   T233020303031033333232031110111101112123033...32.22    38        
--
>964_3490_3635_F3	ENSMUST00000113126	+	2696	2721	25	50	50	180	1x14x11	
G:       2696    GCATCCTTGGGCCAGGGCCACAGCCGATATCTTATACGACCTGTGTTTAG    2721      
                                         |X|||||||||||||X||||||||||
T:               ------------------------CgATATCTTATACGAcCTGTGTTTAG
R:         25   T233023103211313201223331102333220333132202...00.32    50        
--
>965_602_2646_F3	ENSMUST00000113126	-	2603	2629	12	38	50	170	2x2x2x3x10x8	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                            ||X|X|X||X|||||||||X|||||||
T:               -----------TGtAgAcAGaGGTGTGGTGtGGTGTCA------------
R:         12   T02230201030313312312120111101131011121.131...122.2    38        
--
>965_1022_2438_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302032300321123123203111011110111212.020...132.2    38        
--
>965_2372_4746_F3	ENSMUST00000113126	-	2600	2620	20	40	50	180	13x8	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||||||||||||X|||||||
T:               -------------------AGGTGTGGTGTGGtGTCAGGG----------
R:         20   T10101013003201022123201111011110011212.003...333.2    40        
--
>965_2874_1052_F3	ENSMUST00000113126	-	2603	2627	13	37	50	170	2x2x3x3x15	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                             ||X|X||X||X||||||||||||||
T:               ------------TAgAcAGaGGtGTGGTGTGGTGTCA-------------
R:         13   T33102010003103323123203111011110111211.003...300.3    37        
--
>965_3130_4185_F3	ENSMUST00000113126	-	2603	2627	14	38	50	170	2x2x6x12x3	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X|X|||||X|||||||||||X||
T:               -------------TAgAcAGAGGtGTGGTGTGGTGtCA------------
R:         14   T02330201030310312312220311101111011221.330...023.0    38        
--
>965_3402_2686_F3	ENSMUST00000113126	-	713	753	2	42	50	180	2x1x10x7x3x1x2x4x3x2x2x4	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCAGACAGGT    713       
                  ||XX|||||||||X||||||X||XX|X|||X||X|X|X|||
T:               -CAgcAATATGCAGgCAGTAGgCActGaCATtGTcAtTgAGC--------
R:          2   T13130103331312231213233133131132110110.323...323.2    42        
--
>965_3647_4517_F3	ENSMUST00000113126	-	2606	2626	15	35	50	170	1x16x4	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAA    2606      
                               |X|||||||||||||||X|||
T:               --------------AgACAGAGGTGTGGTGTgGTG---------------
R:         15   T03230201030313012112220111101112011330.223...032.1    35        
--
>966_742_2352_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23302010300201021123203111011110111201.223...22023    36        
--
>966_2046_2660_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x7x2x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||X|X|||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAAT-------------
R:          9   T00133031111222232011110111212200113031.212...32320    37        
--
>966_2251_1908_F3	ENSMUST00000113126	-	2600	2622	18	40	50	200	16x7	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                  ||||||||||||||||X||||||
T:               -----------------AGAGGTGTGGTGTGGTgTCAGGG----------
R:         18   T01002013303111023222201111011110121212.233...31233    40        
--
>966_2399_36_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T33102010301001310123203111011110111212.203...31323    38        
--
>966_3349_873_F3	ENSMUST00000113126	-	1175	1199	5	29	50	176	4x8x8C4	
G:       1199    GAGGCTTGTAATGGTGGCTGCTAAGCATACCTGCCTGGCAGTCCCAGCAA    1175      
                     ||||X|||||||X||||||| ||||
T:               ----CTTGtAATGGTGgCTGCTAACCATA---------------------
R:          5   T02330201030310112321323010133112331323.303...10021    29        
--
>968_1810_371_F3	ENSMUST00000113126	+	2724	2741	12	29	50	180	18	
G:       2724    TGTGTTTAGGACATTTTTTAAATCATTGTGTCTAAGCATCTCAGAGTCAA    2741      
                            ||||||||||||||||||
T:               -----------CATTTTTTAAATCATTGT---------------------
R:         12   T10330332122013000003003213011200311011.112...02..2    29        
--
>968_2928_5036_F3	ENSMUST00000113126	-	2603	2629	12	38	50	156	2x2x2T2x11x7	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                            ||X|X| ||X||||||||||X||||||
T:               -----------TGtAgATAGaGGTGTGGTGTgGTGTCA------------
R:         12   T02230201030310312332320111101112011121.233...20..1    38        
--
>969_2388_3527_F3	ENSMUST00000113126	-	2597	2625	15	43	50	200	8x8x2x4x7	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                               ||||||||X|||||||X|X|||X||||||
T:               --------------GACAGAGGtGTGGTGTgGtGTCaGGGTGC-------
R:         15   T02002010303231021122203111011120311202.3113.233132    43        
--
>969_2645_1139_F3	ENSMUST00000113126	-	2595	2622	18	45	50	186	2x17T3x5	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                  ||X|||||||||||||||| |||X||||
T:               -----------------AGaGGTGTGGTGTGGTGTCTGGGtGCTG-----
R:         18   T01002013303111023223201111011110111221.0313.223113    45        
--
>969_2667_369_F3	ENSMUST00000113126	-	2595	2620	20	45	50	200	3x18x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                    |||X|||||||||||||||||X||||
T:               -------------------AGGtGTGGTGTGGTGTCAGGGtGCTG-----
R:         20   T23122011300003030213203111011110111212.3013.232213    45        
--
>969_3086_2226_F3	ENSMUST00000113126	-	772	797	1	26	50	152	4x2A1T9x8	
G:        797    GGAATCCAGTGGCGGAAAATCCGTGTCGTGCGTGCGTGCGTAGCCTTCTA    772       
                 ||||X| | |||||||||X|||||||
T:               GGAAtCAATTGGCGGAAAaTCCGTGT------------------------
R:          1   T10202210301033020023203111311120313001.0333.113322    26        
--
>969_3452_3859_F3	ENSMUST00000113126	-	2604	2627	14	37	50	166	2x2T13x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                              ||X| |||||||||||||X|||||
T:               -------------TAgATAGAGGTGTGGTGTgGTGTC-------------
R:         14   T02330201030310312332220111101112011120.2333.222122    37        
--
>970_675_4396_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	3x3x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |||X||X||X|||||||||||||
T:               -------------AGAcAGaGGtGTGGTGTGGTGTC--------------
R:         14   T330002303313112221232031110111101112012321.1202.33    36        
--
>970_2209_1650_F3	ENSMUST00000113126	+	759	784	14	39	50	200	2x3x1x20	
G:        759    TATTGCTGAGGATGATGGGGAGGTCGACACGGATTTTCCGCCACTGGATT    784       
                              ||X||XX|||||||||||||||||||
T:               -------------GAtGGggAGGTCGACACGGATTTTCC-----------
R:         14   T001330311112322010132201232111302300020201.2310.10    39        
--
>970_2396_1553_F3	ENSMUST00000113126	-	2596	2614	16	34	50	170	12x7	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTAAAAATCCCTCAAAGA    2596      
                                ||||||||||||X||||||
T:               ---------------GGTGTGGTGTCAgGGTGCT----------------
R:         16   T010303111123223201111011121100113223310001.3211.33    34        
--
>971_673_285_F3	ENSMUST00000113126	-	2602	2623	16	37	50	160	3x3x11x5	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||X||||||||||X||||
T:               ---------------CAGaGGtGTGGTGTGGTgTCAG-------------
R:         16   T112201030313112312320311101111012121210001...130.0    37        
--
>971_1666_3260_F3	ENSMUST00000113126	-	2602	2626	14	38	50	170	1x2x3x3x16	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                              |X|X||X||X|||||||||||||||
T:               -------------AgAcAGaGGtGTGGTGTGGTGTCAG------------
R:         14   T301020103030313231232031110111101112121033...230.3    38        
--
>971_2160_4322_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	1x2x13x7	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |X|X||||||||||||X||||||
T:               ----------------CaGaGGTGTGGTGTGGtGTCAGG-----------
R:         17   T233020103001023333232011110111103112120103...103.2    39        
--
>971_2245_1201_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x11x7	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||||||||||X||||||
T:               ----------------CAGaGGTGTGGTGTgGTGTCA-------------
R:         17   T233020103021020231232011110111301112112330...113.1    37        
--
>971_2472_2148_F3	ENSMUST00000113126	-	2602	2624	19	41	50	170	1x3x3x16	
G:       2624    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                   |X||X||X|||||||||||||||
T:               ------------------AcAGaGGtGTGGTGTGGTGTCAG---------
R:         19   T121233020103003311331232031110111101112123...122.2    41        
--
>971_2602_2910_F3	ENSMUST00000113126	-	2604	2623	15	34	50	160	3x3x14	
G:       2623    ATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAATCC    2604      
                               |||X||X|||||||||||||
T:               --------------CAGaGGtGTGGTGTGGTGTC----------------
R:         15   T312210300131133123203111011110111223312133...222.3    34        
--
>971_2950_2769_F3	ENSMUST00000113126	-	2604	2626	15	37	50	170	1x2x14x6	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                               |X|X|||||||||||||X|||||
T:               --------------AgAcAGAGGTGTGGTGTgGTGTC-------------
R:         15   T021302010303101123122201111011120111203203...002.3    37        
--
>972_117_4639_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02230201030310112312320111101112011121.202..110312    38        
--
>972_2950_4574_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	3x3x5x11	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X||||X||||||||||
T:               ----------------CAGaGGtGTGGtGTGGTGTCAG------------
R:         17   T23102210300103323123203111031110111212.310..233220    38        
--
>973_495_2056_F3	ENSMUST00000113126	-	2604	2622	19	37	50	170	13x6	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                   |||||||||||||X|||||
T:               ------------------AGAGGTGTGGTGTgGTGTC-------------
R:         19   T31130201030310112302220111101112011123.130...122.3    37        
--
>973_526_1130_F3	ENSMUST00000113126	-	2605	2629	11	35	50	170	2x5x2x13x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                           ||X||||X|X||||||||||||X||
T:               ----------TGtAGACaGaGGTGTGGTGTGGtGT---------------
R:         11   T03302013303103221323201111011110311301.011...311.1    35        
--
>973_2834_527_F3	ENSMUST00000113126	-	2604	2627	13	36	50	160	1x6x1x2x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             |X|||||XX|X|||||||||||||
T:               ------------TaGACAGagGtGTGGTGTGGTGTC--------------
R:         13   T33302010303001221123003111011110111201.200...330.0    36        
--
>974_1851_3193_F3	ENSMUST00000113126	-	2593	2623	18	48	50	190	3x11x7x3x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAA    2593      
                                  |||X||||||||||X||||||X||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGGtGCTGGG--
R:         18   T10030201030313112312320111101112011121.003...200.2    48        
--
>974_3562_3868_F3	ENSMUST00000113126	-	2602	2632	8	38	50	170	1x6x1x1x3x3x13x3	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                        |X|||||XXX||X||X||||||||||||X||
T:               -------TgGTGTAgacAGaGGtGTGGTGTGGTGTcAG------------
R:          8   T03222010301113033123203111011110111112.000...103.2    38        
--
>974_3597_1737_F3	ENSMUST00000113126	-	2213	2234	12	33	50	180	5x10x7	
G:       2234    ACGGATTTTCCACCCACGCATGCACTTACGCTGATTCATAAGTTTGGCTT    2213      
                            |||||X|||||||||X||||||
T:               -----------ACCCAcGCATGCACTtACGCTG-----------------
R:         12   T23300200330310012331313112231332132303.110...223.2    33        
--
>974_4236_3327_F3	ENSMUST00000113126	-	1174	1199	5	30	50	186	4x8x8C5	
G:       1199    GAGGCTTGTAATGGTGGCTGCTAAGCATATCTGCCTGGCAGTCCCAGCAA    1174      
                     ||||X|||||||X||||||| |||||
T:               ----CTTGtAATGGTGgCTGCTAACCATAT--------------------
R:          5   T31110201330310112321323010133312123010.033...322.2    30        
--
>975_3538_1752_F3	ENSMUST00000113126	-	2605	2626	14	35	50	160	1x5x3x13	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              |X||||X||X||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGT---------------
R:         14   T23002010303302321123203111011110111301.302...313.2    35        
--
>976_2667_2465_F3	ENSMUST00000113126	-	2077	2095	16	34	50	150	6x2x11	
G:       2095    GGATTCTCCCTTATCGAGCTCCAACCACAGCTTTTCACCATGAAGGAGAT    2077      
                                ||||||X|X||||||||||
T:               ---------------GAGCTCcAaCCACAGCTTT----------------
R:         16   T23102103031310232232231110111232002121.331..0.0..0    34        
--
>977_859_2007_F3	ENSMUST00000113126	-	2597	2620	20	43	50	190	3x18x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAAT    2597      
                                    |||X|||||||||||||||||X||
T:               -------------------AGGtGTGGTGTGGTGTCAGGGtGC-------
R:         20   T03102013301201101123203111011110111212.3313.3333.0    43        
--
>977_1241_1233_F3	ENSMUST00000113126	-	2599	2623	14	38	50	170	3x3x12x4x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                              |||X||X|||||||||||X|||X||
T:               -------------CAGaGGtGTGGTGTGGTGtCAGgGT------------
R:         14   T22010303131123123203111011110113212301.1302.3211.2    38        
--
>977_2798_1029_F3	ENSMUST00000113126	-	2604	2622	18	36	50	190	19	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                  |||||||||||||||||||
T:               -----------------AGAGGTGTGGTGTGGTGTC--------------
R:         18   T33302010300303113322201111011110111200.0222.2221.3    36        
--
>977_2921_1003_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T23302010303101023113201111011110111232.2203.0333.2    36        
--
>977_3531_2039_F3	ENSMUST00000113126	-	2603	2628	12	37	50	166	3T1x3x3x15	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                            ||| |X||X||X||||||||||||||
T:               -----------GTATAcAGaGGtGTGGTGTGGTGTCA-------------
R:         12   T33002010303213333123203111011110111211.3030.2121.2    37        
--
>977_3646_1568_F3	ENSMUST00000113126	-	2603	2623	17	37	50	150	1x2x3x15	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |X|X||X||||||||||||||
T:               ----------------CaGaGGtGTGGTGTGGTGTCA-------------
R:         17   T23322010300203030323203111011110111213.3101.1123.2    37        
--
>978_800_2662_F3	ENSMUST00000113126	+	457	479	9	31	50	170	3x8x2x10	
G:        457    AAGTTCAGGCAAGCAGTCCATATTGTCTGTACGCCTGGAGCAGTGCCCTC    479       
                         |||X|||||||X|X|||||||||
T:               --------GCAaGCAGTCCaTaTTGTCTGTA-------------------
R:          9   T2201030.131123121203313011221133323112031332223211    31        
--
>979_1581_3210_F3	ENSMUST00000113126	-	90	125	1	36	50	166	1x5x1x1G2x2x2x2x3x16	
G:        125    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATTG    90        
                 |X||||XX ||X|X|X|X||X|||||||||||||||
T:               CaTTCCtgGGTcAtCaCtGGtCACGTGTGACTGTCG--------------
R:          1   T23302013001310231310221131111212112301.233...12..3    36        
--
>979_2390_4256_F3	ENSMUST00000113126	-	2604	2622	19	37	50	170	14x5	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                   ||||||||||||||X||||
T:               ------------------AGAGGTGTGGTGTGgTGTC-------------
R:         19   T02330201330212312032220111101111111120.023...10..0    37        
--
>980_2091_22_F3	ENSMUST00000113126	-	2599	2622	19	42	50	170	2x11x7x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                   ||X||||||||||X||||||X|||
T:               ------------------AGaGGTGTGGTGTgGTGTCAgGGT--------
R:         19   T02130201000310112332320111101112011121.001...223.0    42        
--
>980_2316_2163_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	x5x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               X||||X||X||||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T23122011300031121123203111011110111211.211...320.3    37        
--
>980_3165_976_F3	ENSMUST00000113126	-	708	750	5	47	50	216	4x6x11x1C3x2x4x1x10	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCGGGGT    708       
                     ||||X|||||X||||||||||X |||X|X|||XX|||||||||
T:               ----CAATaTGCAGgCAGTAGGCACtCACAtTgTCAttGAGCTTCGG---
R:          5   T20202103031312231213203111211100212101.323...100.0    47        
--
>980_4195_1660_F3	ENSMUST00000113126	-	2442	2469	21	48	50	166	1x14x6C6	
G:       2469    CAAGTTTGATGGCAAGGGTCAGCAGCGTCTGGCTCCACAGCAGGCACCCG    2442      
                                     |X|||||||||||||X||||| ||||||
T:               --------------------AgCAGCGTCTGGCTCcACAGCCGGCACC--
R:         21   T13021030311312312133303123312210322111.230...010.3    48        
--
>981_2520_4305_F3	ENSMUST00000113126	+	2141	2169	14	42	50	156	3x4x3G1x1x5x11	
G:       2141    TTAACTGTGCCATTTGTTTAAATAAGTGATTTGCTTTGAGAATAGCATCT    2169      
                              |||X|||X|| |XX||||X||||||||||
T:               -------------TTGtTTAaATGAgtGATTtGCTTTGAGAA--------
R:         14   T3233322221330301000320312101230113200122202..120.3    42        
--
>982_1699_2871_F3	ENSMUST00000113126	-	2597	2620	23	46	50	160	3x14x2x5	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAA    2597      
                                       |||X|||||||||||||X|X||||
T:               ----------------------AGGtGTGGTGTGGTGTCaGgGTGC----
R:         23   T122230020103001310331232031110111101112223..3302.2    46        
--
>982_2366_238_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	2x5x3x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||X||||X||X|||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGTC--------------
R:         13   T201020103030030211232031110111101112030131..3320.2    36        
--
>982_3428_4642_F3	ENSMUST00000113126	-	79	110	16	47	50	180	3x2x2x13x2x5x5	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    79        
                                |||X|X|X||||||||||||X|X||||X||||
T:               ---------------ACTgGtCaCGTGTGACTGTCgAaTATGaGCTA---
R:         16   T130131030313102312300231311112121121213331..3230.0    47        
--
>982_3440_3482_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T021302013303101123123201111011120111211323..0120.2    38        
--
>983_2096_2792_F3	ENSMUST00000113126	-	719	754	1	36	50	200	4x4x6x11x1x1x3x2x4	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                 ||||X|||X|||||X||||||||||XXX||X|X|||
T:               TCAGcAATaTGCAGgCAGTAGGCACtgaCAtTgTCA--------------
R:          1   T02120103031312231213203111311110212101.103..222..1    36        
--
>983_3625_1679_F3	ENSMUST00000113126	-	2600	2623	17	40	50	170	3x3x13x5	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X||||||||||||X||||
T:               ----------------CAGaGGtGTGGTGTGGTGTcAGGG----------
R:         17   T23302110321331113123203111011110111312.322..233..1    40        
--
>984_1324_1516_F3	ENSMUST00000113126	-	88	114	12	38	50	170	4x3x2x2x13x3	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    88        
                            ||||X||X|X|X||||||||||||X||
T:               -----------CATCaCTgGtCaCGTGTGACTGTCgAA------------
R:         12   T02000010031313231230222131111212112020.203..3302.2    38        
--
>984_1444_1644_F3	ENSMUST00000113126	+	919	945	12	38	50	176	7x3C11x2x3	
G:        919    TGGATTCTCCCTTATCCAAGTAGACAACACAAAGGTCACCATGAAGGAGA    945       
                            |||||||X|| |||||||||||X|X||
T:               -----------TTATCCAaGTCGACAACACAAAgGtCA------------
R:         12   T03302010300003320122123211011110010221.121..3231.2    38        
--
>984_3298_3770_F3	ENSMUST00000113126	-	2071	2095	13	37	50	170	5x1x2x10x7	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                             |||||XX|X|||||||||X||||||
T:               ------------GAGCTccAaCCACAGCTTtTGTAAT-------------
R:         13   T00133031111212232011110111232030113030.202..0211.0    37        
--
>984_3994_1526_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x13x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||||||||||||X|||
T:               --------------GACAGaGGTGTGGTGTGGtGTC--------------
R:         15   T23122013321201021123201111011110311201.233..2322.3    36        
--
>986_3016_125_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T32122010300103321123203111011110111203.033.3211..0    36        
--
>986_3936_1081_F3	ENSMUST00000113126	-	2600	2631	5	36	50	166	2x3x1x2G2x11x2x8	
G:       2631    TCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCCT    2600      
                     ||X||XX| ||X||||||||||X|X|||||||
T:               ----GGtGTagAGAGaGGTGTGGTGTgGtGTCAGGG--------------
R:          5   T00133031111222232011110111200112120023.330.2000..1    36        
--
>987_198_2431_F3	ENSMUST00000113126	-	2601	2623	18	40	50	160	1x2x11x9	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  |X|X||||||||||X||||||||
T:               -----------------CaGaGGTGTGGTGTgGTGTCAGG----------
R:         18   T13030201030310112332320111101112011121.130...330.0    40        
--
>987_1674_1861_F3	ENSMUST00000113126	+	918	941	14	37	50	180	5x1x8x10	
G:        918    TCATGGATTCTCCCTTATCCAAGTAGACAACACAAAGGTCACCATGAAGG    941       
                              |||||XX|||||||X|||||||||
T:               -------------CTTATccAAGTAGAcAACACAAAG-------------
R:         14   T33103331231203203333102132221011110023.202...210.3    37        
--
>987_2526_2305_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T03230201330310112312320111101112011121.033...330.2    38        
--
>987_2527_2303_F3	ENSMUST00000113126	-	2600	2625	16	41	50	170	x5x11x4x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                X||||X||||||||||X|||X|||||
T:               ---------------gACAGaGGTGTGGTGTgGTGtCAGGG---------
R:         16   T03130201330310112112320111101112011021.303...000.3    41        
--
>987_2618_3369_F3	ENSMUST00000113126	-	2604	2629	11	36	50	180	1x5x1x2x17	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           |X||||XX|X||||||||||||||||
T:               ----------TgTAGAcaGaGGTGTGGTGTGGTGTC--------------
R:         11   T01002013313213223223201111011110111232.210...233.2    36        
--
>987_2770_795_F3	ENSMUST00000113126	-	2604	2626	15	37	50	170	1x7x9x6	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                               |X||||||X||||||||X|||||
T:               --------------AgACAGAGgTGTGGTGTgGTGTC-------------
R:         15   T02330201330310012112223111101112011120.330...212.2    37        
--
>987_3205_3377_F3	ENSMUST00000113126	-	2593	2614	16	37	50	180	16x1x5	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAGA    2593      
                                ||||||||||||||||XX||||
T:               ---------------GGTGTGGTGTCAGGGTgcTGGG-------------
R:         16   T01030311112322320111101112120012121000.232...213.0    37        
--
>988_1674_4954_F3	ENSMUST00000113126	-	2596	2627	14	45	50	176	2x2T2x11x6x4x4	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                              ||X| ||X||||||||||X|||||X|||X|||
T:               -------------TAgATAGaGGTGTGGTGTgGTGTCaGGGtGCT-----
R:         14   T0233020103031031233232011110111201112020031.2220.3    45        
--
>988_1692_2299_F3	ENSMUST00000113126	+	2594	2622	12	40	50	176	3x1x3x1x2T18	
G:       2594    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                            |||XX||XX| ||||||||||||||||||
T:               -----------CCAgcACccTTACACCACACCACACCTCT----------
R:         12   T2332201030310112112320311101111011110222231.2322.3    40        
--
>988_2123_186_F3	ENSMUST00000113126	-	2601	2625	14	38	50	170	2x3x3x10x7	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                              ||X||X||X|||||||||X||||||
T:               -------------GAcAGaGGtGTGGTGTGGtGTCAGG------------
R:         14   T2330110303131023123203111011110211212012012.2233.1    38        
--
>988_3143_1924_F3	ENSMUST00000113126	-	2606	2627	13	34	50	180	4x3x15	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                             ||||X||X||||||||||||||
T:               ------------TAGAcAGaGGTGTGGTGTGGTG----------------
R:         13   T3210201030330322312320111101111011320011001.2322.0    34        
--
>988_4102_695_F3	ENSMUST00000113126	+	2591	2616	9	34	50	160	3x11x2x3x2x5	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2616      
                         |||X||||||||||X|X||X|X||||
T:               --------TACcCAGCACCCTGaCaCCaCaCCAC----------------
R:          9   T0330201303130123110021310100121011212333210.3022.2    34        
--
>989_660_3244_F3	ENSMUST00000113126	-	2605	2622	18	35	50	180	18	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                                  ||||||||||||||||||
T:               -----------------AGAGGTGTGGTGTGGTGT---------------
R:         18   T23100010301001012222201111011110111103.223..1023.0    35        
--
>989_897_4971_F3	ENSMUST00000113126	-	2600	2622	15	37	50	170	2x3x12x6	
G:       2622    TTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCC    2600      
                               ||X||X|||||||||||X|||||
T:               --------------AGaGGtGTGGTGTGGTGtCAGGG-------------
R:         15   T22010300131123223203111011110113212000.123..3323.1    37        
--
>989_2375_1899_F3	ENSMUST00000113126	-	2601	2622	19	40	50	170	2x11x9	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                   ||X||||||||||X||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGG----------
R:         19   T03230201330310112132320111101112011121.330..3121.3    40        
--
>989_2822_370_F3	ENSMUST00000113126	-	2600	2628	12	40	50	186	3x3T1x15x6	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                            |||X|| |X||||||||||||||X|||||
T:               -----------GTAgACTGaGGTGTGGTGTGGTGtCAGGG----------
R:         12   T01002013303013321213201111011110112212.203..3113.2    40        
--
>989_2862_2638_F3	ENSMUST00000113126	-	2606	2624	16	34	50	170	4x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                                ||||X||||||||||||||
T:               ---------------ACAGaGGTGTGGTGTGGTG----------------
R:         16   T23102010301101201123201111011110113222.332..3133.1    34        
--
>989_3018_424_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	2x16	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     ||X|||||||||||||||
T:               --------------------AGgTGTGGTGTGGTGTCA------------
R:         21   T02130201030310312332323111101111011121.133..2222.1    38        
--
>989_3179_3109_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	1x3x17	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                |X||X||||||||||||||||
T:               ---------------AcAGaGGTGTGGTGTGGTGTC--------------
R:         16   T23102010300201332123201111011110111201.023..2211.2    36        
--
>989_3383_2603_F3	ENSMUST00000113126	-	2600	2624	16	40	50	180	4x2x6x13	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                ||||X|X|||||X||||||||||||
T:               ---------------ACAGaGgTGTGGtGTGGTGTCAGGG----------
R:         16   T23302010003101231123211111021110111212.222..0312.2    40        
--
>990_574_2634_F3	ENSMUST00000113126	-	2602	2625	13	36	50	160	2x4x2x8x8	
G:       2625    ATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCC    2602      
                             ||X|||X|X|||||||X|||||||
T:               ------------GAcAGAgGtGTGGTGTgGTGTCAG--------------
R:         13   T101210303131123122303111011120111212123230..1002.2    36        
--
>990_2119_3201_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	3x8x10	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||X|||||||X|||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGG-----------
R:         19   T310201030313102312320311101112011121200311..2302.3    39        
--
>990_2212_2175_F3	ENSMUST00000113126	-	2603	2624	16	37	50	160	2x2x3x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                ||X|X||X||||||||||||||
T:               ---------------ACaGaGGtGTGGTGTGGTGTCA-------------
R:         16   T223020103013032313232031110111101112102020..3330.1    37        
--
>990_2307_2456_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	16x2x3	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    ||||||||||||||||X|X||
T:               -------------------AGGTGTGGTGTGGTGTcAgGG----------
R:         20   T233020103013003001232011110111101113130031..1032.2    40        
--
>990_2641_360_F3	ENSMUST00000113126	-	79	110	16	47	50	166	3x2x2x15T1x3x5	
G:        110    CTCTGTATTTGAATTACTGGTCACGTGTGACTGTCGAATATGAGCTATTG    79        
                                |||X|X|X|||||||||||||| |X||X||||
T:               ---------------ACTgGtCaCGTGTGACTGTCGATTaTGaGCTA---
R:         16   T200201030313102312302221311112121123230231..3231.1    47        
--
>990_3549_188_F3	ENSMUST00000113126	+	2323	2341	20	38	50	170	2x17	
G:       2323    GAGAGACAGGTGCTGGTAATATAGTGTGACAGTGTCTCCAAGTGGTGCTG    2341      
                                    ||X||||||||||||||||
T:               -------------------TAtAGTGTGACAGTGTCTC------------
R:         20   T313302010303101123323232111121121112222313..2312.3    38        
--
>990_3861_288_F3	ENSMUST00000113126	-	2595	2620	21	46	50	180	2x9x10x5	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                     ||X||||||||X|||||||||X||||
T:               --------------------AGgTGTGGTGTgGTGTCAGGGtGCTG----
R:         21   T123302010303100123323211111011120111212000..3130.2    46        
--
>990_4077_1811_F3	ENSMUST00000113126	-	2244	2269	5	30	50	180	3x3x9x2x9	
G:       2269    TATTGAAGGCTACGCACGCACGCACGCACGGGATTTTCCGCCACTGGATT    2244      
                     |||X||X||||||||X|X||||||||
T:               ----GAAgGCtACGCACGCaCgCACGCACG--------------------
R:          5   T020302010303133113331131133113001133102330..1123.2    30        
--
>991_552_2621_F3	ENSMUST00000113126	-	2594	2629	12	47	50	160	2x2x2x1x2x11x7x3x1x5	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                            ||X|X|XX|X||||||||||X||||||X||XX||||
T:               -----------TGtAgAcaGaGGTGTGGTGTgGTGTCAgGGtgCTGG---
R:         12   T02130201330310312232320111101112011121.20203.00320    47        
--
>991_1706_4083_F3	ENSMUST00000113126	+	2595	2624	13	42	50	176	5x2x2x13x3C4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                             |||||X|X|X||||||||||||X|| ||||
T:               ------------CAGCAcCcTgACACCACACCACaCCCCTGT--------
R:         13   T10212103031311231203202111011110113100.31132.22112    42        
--
>991_2318_586_F3	ENSMUST00000113126	-	2596	2620	19	43	50	160	3x8x8x3x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||||||X|||||||X||X||
T:               ------------------AGGtGTGGTGTgGTGTCAGgGTgCT-------
R:         19   T13310103031310231232031110111201112121.03320.10102    43        
--
>991_2534_225_F3	ENSMUST00000113126	-	2605	2625	16	36	50	170	3x13x5	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAA    2605      
                                |||X||||||||||||X||||
T:               ---------------GACaGAGGTGTGGTGTgGTGT--------------
R:         16   T33130201130310112132220111101112011111.20302.12013    36        
--
>991_2730_448_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	x3x3x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 X||X||X|||||||||||||||
T:               ----------------cAGaGGtGTGGTGTGGTGTCAG------------
R:         17   T23302012100021122123203111011110111212.31322.30010    38        
--
>991_3354_937_F3	ENSMUST00000113126	-	2603	2623	17	37	50	170	3x11x7	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                 |||X||||||||||X||||||
T:               ----------------CAGaGGTGTGGTGTgGTGTCA-------------
R:         17   T32302010303131123123201111011120111213.20331.32231    37        
--
>991_3392_2360_F3	ENSMUST00000113126	-	2600	2619	21	40	50	190	20	
G:       2619    AAATTCTAAACAATCAGCCCGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                     ||||||||||||||||||||
T:               --------------------GGTGTGGTGTGGTGTCAGGG----------
R:         21   T21102010303131121023001111011110111212.13223.02002    40        
--
>991_3574_3561_F3	ENSMUST00000113126	-	2603	2634	7	38	50	160	1x2x2x2x2x2x3x11x7	
G:       2634    GAAATTTCTGGTGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                       |X|X|X|X|X|X||X||||||||||X||||||
T:               ------TcTgGtGtAgAcAGaGGTGTGGTGTgGTGTCA------------
R:          7   T02330201230310312212320111101112011121.23231.02332    38        
--
>991_3891_4783_F3	ENSMUST00000113126	-	2600	2627	14	41	50	190	2x3x13x4x6	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X||X||||||||||||X|||X|||||
T:               -------------TAgACaGAGGTGTGGTGTgGTGtCAGGG---------
R:         14   T03230201030310312132220111101112011221.00201.11330    41        
--
>992_798_642_F3	ENSMUST00000113126	-	2593	2620	20	47	50	200	1x18x3x6	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                                    |X|||||||||||||||||X||X|||||
T:               -------------------AgGTGTGGTGTGGTGTCAGgGTgCTGGG---
R:         20   T23101013303203000313001111011110111212.1133.3002.0    47        
--
>992_1233_2051_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T30102010303131320123203111011110111203.3321.3033.0    36        
--
>992_1300_2171_F3	ENSMUST00000113126	-	2600	2623	14	37	50	180	6x12x2x4	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCC    2600      
                              ||||||X|||||||||||X|X|||
T:               -------------CAGAGGtGTGGTGTGGTGtCaGGG-------------
R:         14   T22010303131123122203111011110113202000.1000.2313.0    37        
--
>992_2321_1774_F3	ENSMUST00000113126	-	2596	2620	19	43	50	166	3x12x4T5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                                   |||X|||||||||||X||| |||||
T:               ------------------AGGtGTGGTGTGGTGtCAGTGTGCT-------
R:         19   T13020103031310231232031110111101132121.0132.3311.0    43        
--
>992_4054_931_F3	ENSMUST00000113126	+	2589	2619	7	37	50	176	2x1x5x1x2x4T15	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                       ||XX||||XX|X||| |||||||||||||||
T:               ------GGtaCCCAgcAcCCTTACACCACACCACACC-------------
R:          7   T23302010321001021300203111011110111103.2010.3212.1    37        
--
>992_4104_2553_F3	ENSMUST00000113126	-	1426	1455	11	40	50	170	6x2x8x3x4x3x4	
G:       1455    AGAAAACTGAACTCGAAGTACAGGTGCTTGTAGTCATGGCAGAAGAAATC    1426      
                           ||||||X|X|||||||X||X|||X||X|||
T:               ----------ACTCGAaGtACAGGTGcTTgTAGtCAtGGC----------
R:         11   T22010302131122322233112011220013232111.2303.1010.1    40        
--
>993_1008_4028_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x6x13	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||X|||||X||||||||||||
T:               -------------------CTgACACCaCACCACACCTCT----------
R:         20   T233020103120033301232021110311101111022200..3003.0    40        
--
>993_2655_991_F3	ENSMUST00000113126	-	2597	2620	19	42	50	166	3x8x8T4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||X|||||||X||||||| ||||
T:               ------------------AGGtGTGGTGTgGTGTCAGTGTGC--------
R:         19   T130201030313102312320311101112011121211113..3201.3    42        
--
>993_2786_4573_F3	ENSMUST00000113126	-	2604	2625	15	36	50	166	4T3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||| |||X|||||||||||||
T:               --------------GACATAGGtGTGGTGTGGTGTC--------------
R:         15   T211020103221310211332001110111101112330231..1022.0    36        
--
>993_2955_4490_F3	ENSMUST00000113126	-	720	753	2	35	50	206	3x3A4x12x2x3x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                  |||X|| ||||X|||||||||||X|X||X|||||
T:               -CAGcAAAATGCaGGCAGTAGGCAcTgACaTTGTC---------------
R:          2   T201201000313020312132031320212301120010321..2302.3    35        
--
>994_406_2885_F3	ENSMUST00000113126	-	2603	2625	15	37	50	190	5x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               |||||X||X||||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T323210103302333211232021110111101112112312..230031    37        
--
>994_960_3573_F3	ENSMUST00000113126	-	2604	2625	14	35	50	160	2x3x3x14	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAATC    2604      
                              ||X||X||X|||||||||||||
T:               -------------GAcAGaGGtGTGGTGTGGTGTC---------------
R:         14   T020201030323102312320311101111011120213203..323222    35        
--
>994_1752_2925_F3	ENSMUST00000113126	-	2603	2623	18	38	50	190	3x18	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X|||||||||||||||||
T:               -----------------CAGaGGTGTGGTGTGGTGTCA------------
R:         18   T122302010303101120123201111011110111210212..233013    38        
--
>994_3258_4145_F3	ENSMUST00000113126	-	719	754	1	36	50	180	x4x4x5x1x4x2x5x2x9	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                 X|||X|||X||||XX|||X|X||||X|X||||||||
T:               tCAGcAATaTGCAggCAGtAgGCACtGaCATTGTCA--------------
R:          1   T121201030313132312331031131311301121022203..302002    36        
--
>995_514_2685_F3	ENSMUST00000113126	-	2603	2627	18	42	50	170	2x2x2x1x18	
G:       2627    GAAAGAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAA    2603      
                                  ||X|X|XX|||||||||||||||||
T:               -----------------TAgAcAgaGGTGTGGTGTGGTGTCA--------
R:         18   T111232330201000313312311320111101111011121032110.0    42        
--
>997_923_4319_F3	ENSMUST00000113126	-	2589	2615	16	42	50	160	1x13x2x3x4x4	
G:       2615    ACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTACCCCTCAAAG    2589      
                                |X||||||||||||X|X||X|||X|||
T:               ---------------TgGTGTGGTGTCAGgGtGCtGGGtACC--------
R:         16   T00133031111232232011110111212300133100.0101.1003.2    42        
--
>997_1987_2489_F3	ENSMUST00000113126	+	2605	2623	20	38	50	170	8x11	
G:       2605    CAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGAT    2623      
                                    ||||||||X||||||||||
T:               -------------------ACACCACAcCACACCTCTG------------
R:         20   T22010303131123123203111011130111102221.1303.3210.0    38        
--
>998_1072_1452_F3	ENSMUST00000113126	-	503	524	7	28	50	166	4G13x4	
G:        524    CTGCTGCTCATTAAAGGGGTTATTCAGCTGCTGCTGCTGCTGCTGCTGCT    503       
                       |||| |||||||||||||X|||
T:               ------CTCAGTAAAGGGGTTATTcAGC----------------------
R:          7   T31321222212130020001033011233332331110.1121.222333    28        
--
>998_3258_4917_F3	ENSMUST00000113126	+	1873	1892	13	32	50	160	2x3x15	
G:       1873    AGCAAGACTGTACATAGCCATGCCAGACATCTCCTTGCAACTTGATCAAA    1892      
                             ||X||X||||||||||||||
T:               ------------CAtAGcCATGCCAGACATCT------------------
R:         13   T02310200030301132201313012211322331322.1033.032111    32        
--
>999_2614_2397_F3	ENSMUST00000113126	+	2598	2622	16	40	50	166	3G3x10x8	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                ||| |||X|||||||||X|||||||
T:               ---------------CACGCTGaCACCACACCaCACCTCT----------
R:         16   T30133020332031311133213111011110311102.320..3322.1    40        
--
>1000_1095_512_F3	ENSMUST00000113126	-	2596	2620	23	47	50	180	3x13x9	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTAAA    2596      
                                       |||X||||||||||||X||||||||
T:               ----------------------AGGtGTGGTGTGGTGTcAGGGTGCT---
R:         23   T12323302010303131133123203111011110111.320..1320.3    47        
--
>1000_1491_1752_F3	ENSMUST00000113126	-	2605	2625	15	35	50	170	2x3x16	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                               ||X||X|||||||||||||||
T:               --------------GAcAGaGGTGTGGTGTGGTGT---------------
R:         15   T10210010330031020123201111011110111311.010..2333.2    35        
--
>1000_1801_4087_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	3x15	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||X||||||||||||||
T:               --------------------AGGtGTGGTGTGGTGTCA------------
R:         21   T31030201130310312002320311101111011121.033..0123.3    38        
--
>1000_1850_2174_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	2x16	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     ||X|||||||||||||||
T:               --------------------AGgTGTGGTGTGGTGTCA------------
R:         21   T02130201330310113332322111101111011121.232..1001.0    38        
--
>1000_3066_2832_F3	ENSMUST00000113126	-	2600	2623	14	37	50	160	3x3x12x2x4	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCC    2600      
                              |||X||X|||||||||||X|X|||
T:               -------------CAGaGGtGTGGTGTGGTGtCaGGG-------------
R:         14   T21310303131123123203111011110113232003.100..3113.0    37        
--
>1000_3518_1026_F3	ENSMUST00000113126	-	2600	2622	19	41	50	180	2x17x4	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||||||||X|||
T:               ------------------AGaGGTGTGGTGTGGTGTCaGGG---------
R:         19   T02130201330310112332320111101111011120.102..2203.1    41        
--
>1001_410_3923_F3	ENSMUST00000113126	+	2589	2620	7	38	50	166	2x3x2x4x2x2T11x5	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                       ||X||X|X|||X|X| |||||||||||X||||
T:               ------GGtACcCaGCAcCcTTACACCACACCAcACCT------------
R:          7   T233020103313032313012031110111101311020323..2123.2    38        
--
>1001_473_829_F3	ENSMUST00000113126	-	2602	2627	13	38	50	200	2x2x3x19	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                             ||X|X||X||||||||||||||||||
T:               ------------TAgAcAGaGGTGTGGTGTGGTGTCAG------------
R:         13   T233020203001030221202011110111101112123303..1233.3    38        
--
>1001_1354_4530_F3	ENSMUST00000113126	-	2600	2620	19	39	50	170	3x10x8	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                   |||X|||||||||X|||||||
T:               ------------------AGGtGTGGTGTGGtGTCAGGG-----------
R:         19   T211201030313102312320311101111021121200301..3201.3    39        
--
>1001_2747_3918_F3	ENSMUST00000113126	-	2595	2624	16	45	50	160	2x1x4x13x1x2x7	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                ||XX|||X||||||||||||XX|X||||||
T:               ---------------ACagAGGtGTGGTGTGGTGTcaGgGTGCTG-----
R:         16   T233020130013030013122031110111101110023011..2223.0    45        
--
>1001_3122_4546_F3	ENSMUST00000113126	-	2601	2620	26	45	50	160	11x9	
G:       2620    AGAAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAA    2601      
                                          |||||||||||X||||||||
T:               -------------------------AGGTGTGGTGTgGTGTCAGG-----
R:         26   T101133233020103001331221232011110111201112..2220.0    45        
--
>1001_3410_3262_F3	ENSMUST00000113126	+	2602	2617	20	35	50	160	16	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2617      
                                    ||||||||||||||||
T:               -------------------CTGACACCACACCACA---------------
R:         20   T232020130213010311212121110111101110033030..1103.2    35        
--
>1001_3469_3831_F3	ENSMUST00000113126	-	2599	2620	17	38	50	160	3x2x14x3	
G:       2620    TTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                                 |||X|X|||||||||||||X||
T:               ----------------AGGtGtGGTGTGGTGTCAGgGT------------
R:         17   T220103031311221232001210111101112121012100..2201.1    38        
--
>1001_3598_4695_F3	ENSMUST00000113126	-	2605	2629	11	35	50	190	8x12x2x3	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                           ||||||||X|||||||||||X|X||
T:               ----------TGTAGACAgAGGTGTGGTGTgGtGT---------------
R:         11   T233020120031132211322011110111200113021120..2000.2    35        
--
>1002_1056_3884_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	6x2x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 ||||||X|X|||||||||||||
T:               ----------------CAGAGGtGtGGTGTGGTGTCAG------------
R:         17   T10302010303301023122203121011110111212.332..2123.1    38        
--
>1002_1256_3022_F3	ENSMUST00000113126	+	2591	2620	9	38	50	166	x3x8x1x1T7x9	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                         X||X|||||||XX |||||||X||||||||
T:               --------tACcCAGCACCctTACACCACaCCACACCT------------
R:          9   T20020103031301231103303111011010111102.003..2123.3    38        
--
>1002_1362_4446_F3	ENSMUST00000113126	+	2595	2620	13	38	50	160	1x4x3x1x13x4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                             |X|||X||XX||||||||||||X|||
T:               ------------CaGCAcCCtgACACCACACCACaCCT------------
R:         13   T23302013031313231300102111011110113102.220..1301.2    38        
--
>1002_2685_575_F3	ENSMUST00000113126	-	2597	2625	13	41	50	200	2x3x3x12x9	
G:       2625    ATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCC    2597      
                             ||X||X||X|||||||||||X||||||||
T:               ------------GAcAGaGGtGTGGTGTGGTGtCAGGGTGC---------
R:         13   T20221030010112312020311101111011021200.230..1231.0    41        
--
>1002_3015_2198_F3	ENSMUST00000113126	-	2601	2620	21	40	50	170	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T11130201030310112332320111101112011121.230..3122.3    40        
--
>1002_3136_1863_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T03102010300301001323201111011110111202.220..2023.2    36        
--
>1002_3141_105_F3	ENSMUST00000113126	-	2600	2627	13	40	50	190	1x4x2x17x4	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                             |X|||X|X||||||||||||||||X|||
T:               ------------TaGACaGaGGTGTGGTGTGGTGTCaGGG----------
R:         13   T23102013300301221323201111011110111202.133..2232.0    40        
--
>1002_3191_575_F3	ENSMUST00000113126	-	2604	2629	11	36	50	200	4x5x3x14	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||||X||||X||X|||||||||||||
T:               ----------TGTAgACAGaGGtGTGGTGTGGTGTC--------------
R:         11   T23120010300113021123202111011110111203.231..0103.2    36        
--
>1002_3217_2988_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23102010300101121123203111011110111203.200..3002.3    36        
--
>1002_3389_3716_F3	ENSMUST00000113126	+	2595	2620	13	38	50	186	12x5x4G4	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                             ||||||||||||X||||X||| ||||
T:               ------------CAGCACCCTGACaCCACaCCAGACCT------------
R:         13   T10320103031311231100212101011210122102.031..0332.1    38        
--
>1003_1902_2596_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T222020103031030231232031110111101112323230..322232    36        
--
>1003_2032_3936_F3	ENSMUST00000113126	-	2604	2626	14	36	50	190	1x5x17	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||||||||||||||||
T:               -------------AgACAGaGGTGTGGTGTGGTGTC--------------
R:         14   T233020103000013211232011110111101112022322..331232    36        
--
>1003_2297_1192_F3	ENSMUST00000113126	-	2590	2620	19	49	50	202	15x5T5T4	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTACC    2590      
                                   |||||||||||||||X|||| ||||| ||||
T:               ------------------AGGTGTGGTGTGGTGtCAGGTTGCTGTGTAC-
R:         19   T201020103313112312320111101111011221201013..311312    49        
--
>1003_3338_4815_F3	ENSMUST00000113126	-	2589	2620	19	50	50	186	3x8x10C5x2x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTACC    2589      
                                   |||X|||||||X||||||||| |||||X|X||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGCGCTGGgTaCC
R:         19   T130201030313102312320311101112011121200333..021010    50        
--
>1003_3417_1247_F3	ENSMUST00000113126	-	2593	2620	19	46	50	180	3x6x2x12x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGAATC    2593      
                                   |||X|||||X|X|||||||||||X||||
T:               ------------------AGGtGTGGTgTgGTGTCAGGGTGcTGGG----
R:         19   T130131030313102312320311101212011121200110..000203    46        
--
>1003_4013_2069_F3	ENSMUST00000113126	-	2597	2620	19	42	50	180	7x10x4x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATC    2597      
                                   |||||||X|||||||||X|||X||
T:               ------------------AGGTGTGgTGTGGTGTCaGGGtGC--------
R:         19   T121201030313102312320111131111011120200313..320022    42        
--
>1003_4248_3491_F3	ENSMUST00000113126	-	2600	2618	23	41	50	170	15x4	
G:       2618    GAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                       |||||||||||||||X|||
T:               ----------------------GTGTGGTGTGGTGTCaGGG---------
R:         23   T023302013303103123323211111011110111222002..231332    41        
--
>1004_545_4706_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T30102010300131020123203111011110111222.232..033232    36        
--
>1004_1263_3902_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	3x2x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||X|X||X|||||||||||||
T:               --------------GACaGaGGtGTGGTGTGGTGTC--------------
R:         15   T23122011203003321323203111011110111203.032..000230    36        
--
>1004_1310_1854_F3	ENSMUST00000113126	-	2599	2625	12	38	50	190	2x3x3x16x3	
G:       2625    TTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                            ||X||X||X|||||||||||||||X||
T:               -----------GAcAGaGGtGTGGTGTGGTGTCAGgGT------------
R:         12   T22010300131023123203111011110111212201.232..220320    38        
--
>1004_1404_1554_F3	ENSMUST00000113126	-	2595	2623	14	42	50	166	3x3x12x4x2G4	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAATCCC    2595      
                              |||X||X|||||||||||X|||X| ||||
T:               -------------CAGaGGtGTGGTGTGGTGtCAGgGGGCTG--------
R:         14   T22010303131123123203111011110112212300.121..230200    42        
--
>1004_2068_4012_F3	ENSMUST00000113126	-	2603	2622	19	38	50	160	x13x7	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                   X||||||||||||X||||||
T:               ------------------aGAGGTGTGGTGTgGTGTCA------------
R:         19   T02130201030310312332220111101112011121.233..322220    38        
--
>1004_2622_4159_F3	ENSMUST00000113126	-	2603	2627	14	38	50	190	2x3x13x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X||X||||||||||||X||||||
T:               -------------TAgACaGAGGTGTGGTGTgGTGTCA------------
R:         14   T02130201230310312132220111101113011121.103..323233    38        
--
>1004_2625_2647_F3	ENSMUST00000113126	-	2602	2626	11	35	50	170	3x3x3x13x3	
G:       2626    TTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCCC    2602      
                           |||X||X||X||||||||||||X||
T:               ----------AGAcAGaGGtGTGGTGTGGTGTcAG---------------
R:         11   T22010302131223123203111011110111012100.130..223033    35        
--
>1004_2873_1624_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	2x5x3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             ||X||||X||X||||||||||||
T:               ------------TAgACAGaGGtGTGGTGTGGTGT---------------
R:         13   T23302010301303021123203111011110111100.230..312202    35        
--
>1004_3099_848_F3	ENSMUST00000113126	-	2591	2622	19	50	50	170	2x11x6x4x4x2x3	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2591      
                                   ||X||||||||||X|||||X|||X|||X|X||
T:               ------------------AGaGGTGTGGTGTgGTGTCaGGGtGCTgGgTA
R:         19   T00130201330310112132320111101112011120.202..000313    50        
--
>1004_3145_5042_F3	ENSMUST00000113126	+	2599	2619	11	31	50	170	4x8x9	
G:       2599    GGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGCC    2619      
                           ||||X|||||||X||||||||
T:               ----------ACCCtGACACCAcACCACACC-------------------
R:         11   T13322200330100012111012110111100111302.222..033002    31        
--
>1004_3870_3161_F3	ENSMUST00000113126	-	2603	2622	19	38	50	180	2x18	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                   ||X|||||||||||||||||
T:               ------------------AGaGGTGTGGTGTGGTGTCA------------
R:         19   T02100201133010112322320111101111011121.202..300221    38        
--
>1005_1904_2928_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T12102010303131123123203111011110111231.222...232.3    36        
--
>1005_2153_2317_F3	ENSMUST00000113126	-	2601	2620	19	38	50	160	3x14x3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATC    2601      
                                   |||X|||||||||||||X||
T:               ------------------AGGtGTGGTGTGGTGTCaGG------------
R:         19   T32320103031310231232031110111101112020.230...222.3    38        
--
>1005_2832_1425_F3	ENSMUST00000113126	+	2598	2620	16	38	50	170	3x1x2x17	
G:       2598    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                |||XX|X||||||||||||||||
T:               ---------------CACccTgACACCACACCACACCT------------
R:         16   T23302010300302011113222111011110111102.330...022.1    38        
--
>1005_3237_2025_F3	ENSMUST00000113126	-	2603	2620	20	37	50	180	18	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    ||||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTCA-------------
R:         20   T01002013003211123223201111011110111211.300...101.3    37        
--
>1006_656_827_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	3x1x2x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||XX|X|||||||||||||||
T:               ----------------CAGagGtGTGGTGTGGTGTCAG------------
R:         17   T211020103000312331230031110111101112121230..0112.0    38        
--
>1006_1952_2488_F3	ENSMUST00000113126	-	2601	2617	26	42	50	150	x17	
G:       2617    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                          X||||||||||||||||
T:               -------------------------tGTGGTGTGGTGTCAGG--------
R:         26   T121233020103003310331232331110111101112120..3301.0    42        
--
>1006_2498_3646_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T233022303023213231232031110111101112023113..3202.3    36        
--
>1006_2748_2483_F3	ENSMUST00000113126	-	1927	1950	18	41	50	180	1x16x2x5	
G:       1950    GGACCTGGAGAGCACGCAGAGAAATGTACACTTTTGTTCTTTCTGCCTGG    1927      
                                  |X|||||||||||||||X|X||||
T:               -----------------AgAGAAATGTACACTTTtGtTCTT---------
R:         18   T023302012303101123322200311311120011002202..3320.2    41        
--
>1006_2873_746_F3	ENSMUST00000113126	-	2603	2622	19	38	50	200	20	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                   ||||||||||||||||||||
T:               ------------------AGAGGTGTGGTGTGGTGTCA------------
R:         19   T023302013303103123322201111011110111211230..3023.1    38        
--
>1006_3141_3208_F3	ENSMUST00000113126	-	718	753	2	37	50	166	1x2x4x5A4x2x1x4x2x10	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                  |X|X|||X|||| ||||X|XX|||X|X|||||||||
T:               -CaGcAATaTGCAAGCAGtAggCACtGaCATTGTCAT-------------
R:          2   T130201032313102312330331111111301121333303..3223.0    37        
--
>1006_3156_1009_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T231020133233030110030131110111101111022230..0333.1    40        
--
>1007_196_1065_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	x7x3x13	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             X||||||X||X||||||||||||
T:               ------------tAGACAGaGGtGTGGTGTGGTGT---------------
R:         13   T233020103033032211232031110111101111311003..3333.3    35        
--
>1007_682_768_F3	ENSMUST00000113126	-	2604	2620	25	41	50	170	17	
G:       2620    GAAAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAA    2604      
                                         |||||||||||||||||
T:               ------------------------AGGTGTGGTGTGGTGTC---------
R:         25   T201122330201030313132021320111101111011120..2331.3    41        
--
>1007_1079_719_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T233020103010010303232011110111101112010303..2302.0    36        
--
>1007_1962_4071_F3	ENSMUST00000113126	-	2600	2623	16	39	50	180	3x3x8x10	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                                |||X||X|||||||X|||||||||
T:               ---------------CAGaGGtGTGGTGTgGTGTCAGGG-----------
R:         16   T211201030313112312320311101112011121200002..1102.3    39        
--
>1007_1975_3949_F3	ENSMUST00000113126	+	2222	2251	21	50	50	170	7x11x1x2x4x5	
G:       2222    TAGCATGTGCCCAGCGTAAGTGCATGCGTGGGTGCGTGCGTGCGTGCGTG    2251      
                                     |||||||X||||||||||XX|X|||X||||
T:               --------------------TGCATGCgTGGGTGCGTGcgTgCGTgCGTG
R:         21   T331133233311030003032131313111001133112012..3233.1    50        
--
>1007_2173_3985_F3	ENSMUST00000113126	+	2602	2622	20	40	50	170	2x13x6	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||X||||||||||||X|||||
T:               -------------------CTgACACCACACCACaCCTCT----------
R:         20   T233020133001010233232021110111101121022233..2203.3    40        
--
>1007_2239_3438_F3	ENSMUST00000113126	+	2602	2620	20	38	50	170	2x17	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                    ||X||||||||||||||||
T:               -------------------CTgACACCACACCACACCT------------
R:         20   T231020133022013001132021110111101111020333..2123.1    38        
--
>1007_2819_613_F3	ENSMUST00000113126	-	2603	2622	19	38	50	160	2x11x7	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                   ||X||||||||||X||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCA------------
R:         19   T021302010303103023323201111011120111213302..3012.2    38        
--
>1007_3470_1348_F3	ENSMUST00000113126	-	2602	2617	26	41	50	160	16	
G:       2617    AAGAAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                          ||||||||||||||||
T:               -------------------------TGTGGTGTGGTGTCAG---------
R:         26   T122233020103033310331232031110111101112122..2121.0    41        
--
>1007_3510_4584_F3	ENSMUST00000113126	-	2967	2984	16	33	50	160	4x14	
G:       2984    CTTTTAAAGAGACTGTTGAATATGTGACAAGATCTTCTTGGACAATCCAA    2967      
                                ||||X|||||||||||||
T:               ---------------TTGAaTATGTGACAAGAT-----------------
R:         16   T103020103001111201233331112110223330212331..0102.1    33        
--
>1007_3549_1343_F3	ENSMUST00000113126	-	2604	2629	11	36	50	166	2x2A4x3x14	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           ||X| ||||X||X|||||||||||||
T:               ----------TGtAAACAGaGGtGTGGTGTGGTGTC--------------
R:         11   T223020103031030011232031110111101112013010..3313.3    36        
--
>1007_3664_1171_F3	ENSMUST00000113126	+	2605	2622	23	40	50	180	18	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCT----------
R:         23   T301020103000312221232031110111101111022202..3321.2    40        
--
>1008_2581_413_F3	ENSMUST00000113126	-	2602	2626	11	35	50	190	1x2x6x16	
G:       2626    TTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATCCC    2602      
                           |X|X|||||X|||||||||||||||
T:               ----------AgAcAGAGGtGTGGTGTGGTGTCAG---------------
R:         11   T22010302131123122203111011110111212130.332..330.21    35        
--
>1009_1551_1575_F3	ENSMUST00000113126	-	1175	1199	5	29	50	176	4x8x8C4	
G:       1199    GAGGCTTGTAATGGTGGCTGCTAAGCATACCTGCCTGGCAGTCCCAGCAA    1175      
                     ||||X|||||||X||||||| ||||
T:               ----CTTGtAATGGTGgCTGCTAACCATA---------------------
R:          5   T12230201030310112321323010133112212102.303..222..3    29        
--
>1010_1080_888_F3	ENSMUST00000113126	-	2603	2622	19	38	50	160	2x11x7	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                   ||X||||||||||X||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCA------------
R:         19   T11330201030310212332320111101112011121.000..2110.0    38        
--
>1010_1635_1816_F3	ENSMUST00000113126	-	2595	2634	6	45	50	170	1x5x1x1x1x5x3x12x2x4x5	
G:       2634    AAATTTCTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                      |X||||XXXX||||X||X|||||||||||X|X|||X||||
T:               -----TcTGGTgtagACAGaGGtGTGGTGTGGTGtCaGGGtGCTG-----
R:          6   T23302012101021321123203111011110112232.131..3203.3    45        
--
>1010_1958_382_F3	ENSMUST00000113126	-	2597	2623	20	46	50	160	x6x13x3x5	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAA    2597      
                                    X|||||X||||||||||||X||X||||
T:               -------------------cAGAGGtGTGGTGTGGTGTcAGgGTGC----
R:         20   T00023302210300131033122203111011110111.322..3301.2    46        
--
>1010_4160_2691_F3	ENSMUST00000113126	-	2604	2625	16	37	50	180	16x2x4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                ||||||||||||||||X|X|||
T:               ---------------GACAGAGGTGTGGTGTgGtGTC-------------
R:         16   T02130201130310312112220111101112021122.332..0312.2    37        
--
>1011_410_3066_F3	ENSMUST00000113126	-	2600	2625	15	40	50	190	x5x17x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               X||||X||||||||||||||||X|||
T:               --------------gACAGaGGTGTGGTGTGGTGTCaGGG----------
R:         15   T23302010303201021123201111011110111202.231...312.1    40        
--
>1011_1020_1161_F3	ENSMUST00000113126	-	2605	2628	12	35	50	160	1x3x4x3x13	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                            |X||X|||X||X||||||||||||
T:               -----------GtAGaCAGaGGtGTGGTGTGGTGT---------------
R:         12   T23102010301003201123203111011110111003.332...201.0    35        
--
>1011_1807_4452_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010323003031121203111011110111222.233...210.3    36        
--
>1011_2523_3673_F3	ENSMUST00000113126	-	2600	2624	16	40	50	180	1x6x14x4	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                |X|||||X|||||||||||||X|||
T:               ---------------AcAGAGGtGTGGTGTGGTGTCaGGG----------
R:         16   T23102013300201030122203111011110111202.333...232.2    40        
--
>1011_2753_1437_F3	ENSMUST00000113126	+	2585	2619	3	37	50	162	2x4A1x4x1x2G1x8x10	
G:       2585    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                   ||X||| |X|||XX| |X|||||||X|||||||||
T:               --GCaAGGAAcCCAgcAGCcTGACACCaCACCACACC-------------
R:          3   T33133020203001311231212111031110111103.303...113.3    37        
--
>1011_3168_2751_F3	ENSMUST00000113126	-	2604	2625	16	37	50	160	3x2x11x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                |||X|X||||||||||X|||||
T:               ---------------GACaGaGGTGTGGTGTgGTGTC-------------
R:         16   T02130201330310112132320111101112011120.200...221.0    37        
--
>1011_3967_4601_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	11x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||||||||||X||||||
T:               --------------------AGGTGTGGTGTgGTGTCA------------
R:         21   T02130201030310312332320111101112011121.303...110.1    38        
--
>1012_605_1009_F3	ENSMUST00000113126	-	2598	2623	17	42	50	180	3x14x3x2x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                 |||X|||||||||||||X||X|X|||
T:               ----------------CAGaGGTGTGGTGTGGTgTCaGgGTG--------
R:         17   T103020103020311231232011110111101312023011.2130.32    42        
--
>1012_636_3777_F3	ENSMUST00000113126	-	2599	2625	15	41	50	170	5x1x2x13x3x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                               |||||XX|X||||||||||||X||X||
T:               --------------GACAGagGtGTGGTGTGGTGTcAGgGT---------
R:         15   T233020103213030211230031110111101110122010.2122.12    41        
--
>1012_1471_1554_F3	ENSMUST00000113126	+	2591	2619	9	37	50	170	3x2x4x3x2x12x3	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                         |||X|X|||X||X|X|||||||||||X||
T:               --------TACcCaGCAcCCtGaCACCACACCACaCC-------------
R:          9   T231201030313002313003131110111101121030131.0310.23    37        
--
>1012_1809_2720_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T233020103003310211232031110111101112032323.2110.03    36        
--
>1012_1994_3240_F3	ENSMUST00000113126	+	2593	2622	11	40	50	160	1x3x4x1x2x13x3x3	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                           |X||X|||XX|X||||||||||||X||X||
T:               ----------CcCAgCACccTgACACCACACCACaCCtCT----------
R:         11   T233020103003010311132021110111101121032223.1133.22    40        
--
>1012_2307_2787_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T031220103201310211232031110111101112021302.3030.22    36        
--
>1012_2455_1575_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |||||X||X|||||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T231020103001000211232031110111101112012031.0220.03    36        
--
>1012_2931_2872_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T203020103001013111232031110111101112003300.2032.22    36        
--
>1012_3168_2179_F3	ENSMUST00000113126	+	2605	2620	23	38	50	160	16	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                                       ||||||||||||||||
T:               ----------------------ACACCACACCACACCT------------
R:         23   T233020103003010021232031110111101111020230.2221.10    38        
--
>1012_3198_1569_F3	ENSMUST00000113126	-	2604	2629	12	37	50	180	2x2x7x9x6	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                            ||X|X||||||X||||||||X|||||
T:               -----------TGtAgACAGAGgTGTGGTGTgGTGTC-------------
R:         12   T021302013303103121122231111011120111230201.1303.31    37        
--
>1013_1526_1594_F3	ENSMUST00000113126	-	2600	2617	21	38	50	160	11x7	
G:       2617    ATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGGAAAAAAAATCC    2600      
                                     |||||||||||X||||||
T:               --------------------TGTGGTGTGGTgTCAGGG------------
R:         21   T20201030011112312333311101111010121200.213..1203.1    38        
--
>1013_2269_2060_F3	ENSMUST00000113126	-	2603	2620	18	35	50	160	3x15	
G:       2620    ATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAATCC    2603      
                                  |||X||||||||||||||
T:               -----------------AGGtGTGGTGTGGTGTCA---------------
R:         18   T20221030013112312320311101111011121301.132..3232.3    35        
--
>1013_3264_1881_F3	ENSMUST00000113126	-	2604	2627	14	37	50	166	2x2T2x17	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                              ||X| ||X||||||||||||||||
T:               -------------TAgATAGaGGTGTGGTGTGGTGTC-------------
R:         14   T31130201230310302332320111101111011120.203..3113.2    37        
--
>1013_3391_370_F3	ENSMUST00000113126	+	2602	2622	20	40	50	160	2x11x8	
G:       2602    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                    ||X||||||||||X|||||||
T:               -------------------CTgACACCACACCaCACCTCT----------
R:         20   T11102013301301331233202111011110311102.320..2021.3    40        
--
>1013_3692_2463_F3	ENSMUST00000113126	-	2603	2626	14	37	50	160	x3x3x3x15	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                              X||X||X||X||||||||||||||
T:               -------------aGAcAGaGGtGTGGTGTGGTGTCA-------------
R:         14   T23302310321231222123203111011110111211.233..3123.2    37        
--
>1013_3911_2428_F3	ENSMUST00000113126	-	2604	2629	12	37	50	180	2x2x3x13x6	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                            ||X|X||X||||||||||||X|||||
T:               -----------TGtAgACaGAGGTGTGGTGTgGTGTC-------------
R:         12   T03230201130310312132220111101112011120.330..2230.0    37        
--
>1013_4299_416_F3	ENSMUST00000113126	+	2592	2619	10	37	50	200	1x4x5x2x16	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                          |X|||X||||X|X|||||||||||||||
T:               ---------AcCCAgCACCcTgACACCACACCACACC-------------
R:         10   T23312010300001031103202111011110111103.030..1220.0    37        
--
>1014_1176_5076_F3	ENSMUST00000113126	-	2599	2625	16	42	50	200	2x1x13x11	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                ||XX||||||||||||X||||||||||
T:               ---------------GAcaGAGGTGTGGTGTgGTGTCAGGGT--------
R:         16   T02330201030310012232220111101112011121.301.2223202    42        
--
>1014_1422_3031_F3	ENSMUST00000113126	-	2605	2626	14	35	50	180	1x8x13	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              |X|||||||X||||||||||||
T:               -------------AgACAGAGGtGTGGTGTGGTGT---------------
R:         14   T32302010300001021122202111011110111313.123.2323331    35        
--
>1016_524_624_F3	ENSMUST00000113126	-	2601	2620	21	40	50	170	12x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     ||||||||||||X|||||||
T:               --------------------AGGTGTGGTGTGgTGTCAGG----------
R:         21   T31330201230310312332320111101111211121.311..022213    40        
--
>1016_1041_2819_F3	ENSMUST00000113126	-	2599	2620	19	40	50	170	3x14x5	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X|||||||||||||X||||
T:               ------------------AGGtGTGGTGTGGTGTCaGGGT----------
R:         19   T10320103031310231232031110111101112020.300..320300    40        
--
>1016_1177_2015_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	2x3x3x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||X||X||X||||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTCA-------------
R:         15   T23302010300301120123203111011110111213.023..332103    37        
--
>1016_1623_2021_F3	ENSMUST00000113126	-	2600	2622	19	41	50	180	2x11x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGG---------
R:         19   T02130201030310112032320111101112011121.302..312011    41        
--
>1016_1776_4412_F3	ENSMUST00000113126	-	2600	2626	15	41	50	166	1x2T2x11x10	
G:       2626    GAAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                               |X| ||X||||||||||X|||||||||
T:               --------------AgATAGaGGTGTGGTGTgGTGTCAGGG---------
R:         15   T02130201030310112332320111101112011121.000..210212    41        
--
>1016_1986_1046_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23302010301301210123203111011110111200.030..333231    36        
--
>1016_2189_2473_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T23103013320101010323201111011110111202.200..220333    36        
--
>1016_2237_3018_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23303010321201021123203111011110111202.220..033221    36        
--
>1016_2634_3264_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T23122023302103301123203111011110111200.333..230222    36        
--
>1016_2669_1700_F3	ENSMUST00000113126	-	2596	2623	18	45	50	170	1x2x17x1x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                  |X|X||||||||||||||||XX||||||
T:               -----------------CaGaGGTGTGGTGTGGTGTCagGGTGCT-----
R:         18   T02330201030310312232320111101111011123.301..223232    45        
--
>1016_3827_2597_F3	ENSMUST00000113126	-	2604	2620	20	36	50	170	17	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                    |||||||||||||||||
T:               -------------------AGGTGTGGTGTGGTGTC--------------
R:         20   T23102010310001000223201111011110111201.320..113231    36        
--
>1018_1303_2193_F3	ENSMUST00000113126	-	2600	2631	5	36	50	180	2x3x1x3x2x11x5x5	
G:       2631    TCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATCCCT    2600      
                     ||X||XX||X|X||||||||||X||||X||||
T:               ----GGtGTagACaGaGGTGTGGTGTgGTGTcAGGG--------------
R:          5   T00133031111212232011110111201110120003.132..3121.2    36        
--
>1018_2205_1018_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	11x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||||||||||X||||||
T:               --------------------AGGTGTGGTGTgGTGTCA------------
R:         21   T02130201030310312332320111101112011121.132..0003.2    38        
--
>1018_2689_3597_F3	ENSMUST00000113126	-	2599	2623	14	38	50	150	1x2x3x14x2x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                              |X|X||X|||||||||||||X|X||
T:               -------------CaGaGGtGTGGTGTGGTGTCaGgGT------------
R:         14   T22010303131123323203111011110111232101.230..3212.1    38        
--
>1018_2770_121_F3	ENSMUST00000113126	-	2603	2626	13	36	50	160	x3x3x3x15	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                             X||X||X||X||||||||||||||
T:               ------------aGAcAGaGGtGTGGTGTGGTGTCA--------------
R:         13   T13020103031312231232031110111101112102.302..0202.0    36        
--
>1018_2865_494_F3	ENSMUST00000113126	+	2605	2623	23	41	50	180	19	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       |||||||||||||||||||
T:               ----------------------ACACCACACCACACCTCTG---------
R:         23   T23102010032303010313203111011110111102.013..2223.2    41        
--
>1018_2875_2192_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	11x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||||||||||X||||||
T:               --------------------AGGTGTGGTGTgGTGTCA------------
R:         21   T00130201330310212332320111101112011121.303..2320.1    38        
--
>1018_3211_2871_F3	ENSMUST00000113126	-	1822	1843	4	25	50	180	2x8x12	
G:       1843    GATCACACGGCTGAGCAGCACTCAGAGTCATTCAAAGTCAGCATGATCCA    1822      
                    ||X|||||||X|||||||||||
T:               ---CAcACGGCTGaGCAGCACTCAG-------------------------
R:          4   T23301011303211231231122120112331103000.202..0233.2    25        
--
>1019_618_1973_F3	ENSMUST00000113126	+	1965	1992	5	32	50	160	x5x6x1x1x2x13	
G:       1965    TTAATAAACAGGTATACTCTTTATCGTGGTTGGTATGATGGACCATTCTT    1992      
                     X||||X|||||XXX|X||||||||||||
T:               ----tAAACaGGTATactCtTTATCGTGGTTG------------------
R:          5   T20311300132013300020003323110101221120.130..2203.1    32        
--
>1019_1795_1459_F3	ENSMUST00000113126	-	720	754	1	35	50	170	2x2x8x2x6x1x5x1x2x6	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                 ||X|X|||||||X|X|||||XX||||XX|X|||||
T:               TCaGcAATATGCaGgCAGTAggCACTgaCaTTGTC---------------
R:          1   T02020103331302231213123112311330112203.011..3002.2    35        
--
>1019_3264_1833_F3	ENSMUST00000113126	-	2602	2620	19	37	50	170	7x12	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                   |||||||X|||||||||||
T:               ------------------AGGTGTGgTGTGGTGTCAG-------------
R:         19   T31020103031310231232011111111101112122.020..0320.3    37        
--
>1019_3749_4306_F3	ENSMUST00000113126	-	2591	2625	16	50	50	176	2x1x2x18x3x4A4	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2591      
                                ||XX|X|||||||||||||||||X||X||| ||||
T:               ---------------GAcaGaGGTGTGGTGTGGTGTCAgGGtGCTAGGTA
R:         16   T02130201330310112322020111101111011121.303..0320.3    50        
--
>1019_3800_418_F3	ENSMUST00000113126	-	2601	2620	21	40	50	170	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T02130201030310112312320111101112011121.222..0311.0    40        
--
>1020_1180_670_F3	ENSMUST00000113126	-	2606	2624	16	34	50	170	4x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                                ||||X||||||||||||||
T:               ---------------ACAGaGGTGTGGTGTGGTG----------------
R:         16   T01002013301311301123201111011110110311.020..0330.2    34        
--
>1020_1830_2021_F3	ENSMUST00000113126	+	2598	2632	11	45	50	180	1x5x3x14x1x2x4x5	
G:       2598    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2632      
                           |X||||X||X|||||||||||||XX|X|||X||||
T:               ----------CaCCCTgACaCCACACCACACCTctGtCTAcACCA-----
R:         11   T01000013331010020213101111011110213102.201..3312.2    45        
--
>1020_2224_1734_F3	ENSMUST00000113126	-	2604	2624	16	36	50	170	4x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                ||||X||X|||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTC--------------
R:         16   T10032010303301001123203111011110111200.130..2331.1    36        
--
>1020_3214_4118_F3	ENSMUST00000113126	-	2601	2620	21	40	50	170	11x9	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                     |||||||||||X||||||||
T:               --------------------AGGTGTGGTGTgGTGTCAGG----------
R:         21   T02330201030310112332320111101112011121.222..3022.2    40        
--
>1021_1735_3406_F3	ENSMUST00000113126	-	2600	2622	19	41	50	180	2x11x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGG---------
R:         19   T02330201330310312332320111101112011121.302..333.13    41        
--
>1021_2729_1062_F3	ENSMUST00000113126	-	2061	2099	9	47	50	180	1x3x5x1x2x7x9x2x4x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X||X||||XX|X||||||X||||||||X|X|||X||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAAtCtGCCtGTTC---
R:          9   T02333031111232232031110111222000113002.330..302.22    47        
--
>1021_2872_2067_F3	ENSMUST00000113126	+	2589	2620	7	38	50	160	2x3x1x5x2x2x1x12x4	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2620      
                       ||X||XX||||X|X|XX|||||||||||X|||
T:               ------GGtACccAGCAcCcTgaCACCACACCACaCCT------------
R:          7   T33220100031311231203233111011110112102.100..221.31    38        
--
>1021_3998_4410_F3	ENSMUST00000113126	-	2604	2629	12	37	50	166	2x2x2T2x17	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                            ||X|X| ||X||||||||||||||||
T:               -----------TGtAgATAGaGGTGTGGTGTGGTGTC-------------
R:         12   T02230201030310312332320111101111011122.332..223.21    37        
--
>1022_903_1483_F3	ENSMUST00000113126	-	2600	2623	17	40	50	170	3x3x14x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGG----------
R:         17   T33102013302001300123203111011110111202.303..1210.2    40        
--
>1022_2041_1644_F3	ENSMUST00000113126	-	2600	2623	17	40	50	170	3x3x14x4	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                 |||X||X|||||||||||||X|||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGGG----------
R:         17   T20302010301300302123203111011110111202.300..2303.2    40        
--
>1022_2175_1594_F3	ENSMUST00000113126	-	2600	2627	14	41	50	170	2x2x2x1x11x10	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                              ||X|X|XX||||||||||X|||||||||
T:               -------------TAgAcAgaGGTGTGGTGTgGTGTCAGGG---------
R:         14   T02330201030310312311320111101112011121.100..1212.0    41        
--
>1022_2365_1635_F3	ENSMUST00000113126	-	2604	2623	16	35	50	160	3x3x14	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAATC    2604      
                                |||X||X|||||||||||||
T:               ---------------CAGaGGtGTGGTGTGGTGTC---------------
R:         16   T20020102031310231232031110111101112000.113..3203.3    35        
--
>1022_2772_4747_F3	ENSMUST00000113126	-	2600	2622	19	41	50	180	2x11x10	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                   ||X||||||||||X|||||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGGG---------
R:         19   T02320201030310212302320111101112011121.303..2210.3    41        
--
>1022_2783_3105_F3	ENSMUST00000113126	+	639	657	15	33	50	170	11x8	
G:        639    TGACCGTGGTGACCATGGCCAGCGCCAGGGTGCAGGACCTCATCGGGCTC    657       
                               |||||||||||X|||||||
T:               --------------ATGGCCAGCGCcAGGGTGC-----------------
R:         15   T20133302010300331030123333120011323103.123..2302.2    33        
--
>1022_2951_4603_F3	ENSMUST00000113126	-	2599	2620	19	40	50	170	3x13x6	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X||||||||||||X|||||
T:               ------------------AGGtGTGGTGTGGTGTcAGGGT----------
R:         19   T31020103031310231232021110111101113120.201..3320.1    40        
--
>1022_3262_3610_F3	ENSMUST00000113126	-	2601	2629	12	40	50	166	2x2x2T2x14x6	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                            ||X|X| ||X|||||||||||||X|||||
T:               -----------TGtAgATAGaGGTGTGGTGTGGTgTCAGG----------
R:         12   T02130201330310312332320111101111012121.112..0011.3    40        
--
>1022_3407_3463_F3	ENSMUST00000113126	-	2604	2623	16	35	50	180	3x17	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAATC    2604      
                                |||X||||||||||||||||
T:               ---------------CAGaGGTGTGGTGTGGTGTC---------------
R:         16   T31020102031310231232011110111101112003.100..2222.1    35        
--
>1022_3464_299_F3	ENSMUST00000113126	-	2599	2620	19	40	50	170	3x8x11	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAATC    2599      
                                   |||X|||||||X||||||||||
T:               ------------------AGGtGTGGTGTgGTGTCAGGGT----------
R:         19   T02020103031310231232031110111201112120.103..2102.1    40        
--
>1022_3637_4541_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T02330201330310112312320111101112011121.230..1222.3    38        
--
>1022_4012_2022_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T02330201330310312312320111101112011121.002..0310.2    38        
--
>1022_4109_3744_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23202213300001021123203111011110111202.020..1322.3    36        
--
>1023_3896_1970_F3	ENSMUST00000113126	-	2605	2626	14	35	50	160	3x3x3x13	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              |||X||X||X||||||||||||
T:               -------------AGAcAGaGGtGTGGTGTGGTGT---------------
R:         14   T30102010301231222123203111011110111013.030..301..3    35        
--
>1024_2067_3097_F3	ENSMUST00000113126	-	2602	2629	12	39	50	180	2x2x3x2x8x11	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                            ||X|X||X|X|||||||X||||||||||
T:               -----------TGtAgACaGaGGTGTGGtGTGGTGTCAG-----------
R:         12   T0213020133031031212202011110011101112121232.010..2    39        
--
>1024_2774_52_F3	ENSMUST00000113126	-	2603	2627	14	38	50	170	2x2x3x11x7	
G:       2627    GAAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                              ||X|X||X||||||||||X||||||
T:               -------------TAgAcAGaGGTGTGGTGTgGTGTCA------------
R:         14   T0233020103031031231232011110111201112133311.323..1    38        
--
>1024_3113_4199_F3	ENSMUST00000113126	-	2601	2629	12	40	50	176	2x2x2T2x8x12	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                            ||X|X| ||X|||||||X|||||||||||
T:               -----------TGtAgATAGaGGTGTGGtGTGGTGTCAGG----------
R:         12   T0223020103031031233212011110311101112120122.203..3    40        
--
>1024_3303_2674_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T2330201030020101132320311101111011110222031.011..2    40        
--
>1024_3464_4446_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223201111011123200013200301120.220..3    33        
--
>1024_3758_1217_F3	ENSMUST00000113126	-	2591	2622	19	50	50	176	2x11x8x2A3x5	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2591      
                                   ||X||||||||||X|||||||X| |||X||||
T:               ------------------AGaGGTGTGGTGTgGTGTCAGgGAGCTgGGTA
R:         19   T0233020103031011223232011110111201112121022.320..3    50        
--
>1025_979_2360_F3	ENSMUST00000113126	-	2600	2625	15	40	50	170	1x4x3x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |X|||X||X|||||||||||||X|||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCaGGG----------
R:         15   T23212010310301001123203111011110111202.103..0222.1    40        
--
>1025_2946_4587_F3	ENSMUST00000113126	-	2602	2623	16	37	50	160	3x3x10x6	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||X|||||||||X|||||
T:               ---------------CAGaGGtGTGGTGTGGtGTCAG-------------
R:         16   T13020102031323231232031110111100112121.223..2233.1    37        
--
>1025_3048_2083_F3	ENSMUST00000113126	-	2600	2622	18	40	50	180	2x17x4	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                  ||X||||||||||||||||X|||
T:               -----------------AGaGGTGTGGTGTGGTGTCaGGG----------
R:         18   T01022013303211123223201111011110111222.302..1312.3    40        
--
>1025_3353_2798_F3	ENSMUST00000113126	+	2601	2632	19	50	50	172	1x2T18x1G8	
G:       2601    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                   |X| ||||||||||||||||||X ||||||||
T:               ------------------CcTTACACCACACCACACCTCTgGCTACACCA
R:         19   T13102210301303302123203111011110111102.330..2111.2    50        
--
>1026_1047_2556_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x11x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||||||||||X|||||
T:               --------------gACAGaGGTGTGGTGTgGTGTC--------------
R:         15   T23302010300201321123201111011100111202.203..031..1    36        
--
>1026_1412_2555_F3	ENSMUST00000113126	-	719	750	5	36	50	200	9x11x2x1x2x1x6	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     |||||||||X||||||||||X|XX|XX|||||
T:               ----CAATATGCAgGCAGTAGGCAcTgaCatTGTCA--------------
R:          5   T02000103331311031213203122011300112111.022..111..3    36        
--
>1026_2024_3479_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23302010300331121123203111011110111202.203..310..3    36        
--
>1026_2071_2600_F3	ENSMUST00000113126	-	2594	2623	18	47	50	190	3x11x7x3x6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAA    2594      
                                  |||X||||||||||X||||||X||X|||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCAgGGtGCTGG---
R:         18   T02330201030310312212320111101112011121.003..310..2    47        
--
>1026_4074_2043_F3	ENSMUST00000113126	-	2604	2626	14	36	50	170	1x5x3x14	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                              |X||||X||X|||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGTC--------------
R:         14   T23102213300301121123203111011110111202.330..100..1    36        
--
>1026_4076_346_F3	ENSMUST00000113126	+	622	644	15	37	50	170	11x6x1x5	
G:        622    GGACAGACTGCTGCCAATGACCGTGGTGACCATGGCCAGCGCCAGGGTGC    644       
                               |||||||||||X|||||XX||||
T:               --------------CAATGACCGTGgTGACCatGGCC-------------
R:         15   T10330201030220310312103112112100110300.122..320..1    37        
--
>1027_3219_1806_F3	ENSMUST00000113126	-	2601	2620	23	42	50	160	3x12x5	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGTGAAAAAA    2601      
                                       |||X|||||||||||X||||
T:               ----------------------AGGtGTGGTGTGGTGtCAGG--------
R:         23   T303233020103031310231232031110111101132120..022..2    42        
--
>1027_3585_1406_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320111101112320001000023100..312..1    33        
--
>1027_3688_4065_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x3x11x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X||X||||||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCA------------
R:         16   T100302010303203123123201111011120111213332..200..1    38        
--
>1027_3892_2719_F3	ENSMUST00000113126	+	2605	2628	23	46	50	180	7x11x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2628      
                                       |||||||X||||||||||X|||||
T:               ----------------------ACACCACaCCACACCTCTgTCTAC----
R:         23   T231020103013001312333031110112101111022231..212..3    46        
--
>1028_3118_1996_F3	ENSMUST00000113126	-	2599	2617	20	38	50	170	13x6	
G:       2617    TTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTAAAAAAAATCCC    2599      
                                    |||||||||||||X|||||
T:               -------------------TGTGGTGTGGTGTcAGGGT------------
R:         20   T22010300131123123203111011110111012001.132...23.32    38        
--
>1029_1918_1259_F3	ENSMUST00000113126	-	719	753	2	36	50	196	1x2x4x5A11x2x5x4	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                  |X|X|||X|||| |||||||||||X|X||||X|||
T:               -CaGcAATaTGCAAGCAGTAGGCACtGaCATTgTCA--------------
R:          2   T13020103031310231213203111111130312101.210..320.01    36        
--
>1030_1220_2403_F3	ENSMUST00000113126	-	2214	2231	15	32	50	160	1x17	
G:       2231    ACGGATTTTCCGCCCACGCATGCACTTACGCTCATTCATAAGTTTGGCTT    2214      
                               |X||||||||||||||||
T:               --------------CaCGCATGCACTTACGCT------------------
R:         15   T0101003111130020133131311203133220233..2223.112..1    32        
--
>1030_2838_4354_F3	ENSMUST00000113126	-	2601	2623	14	36	50	170	3x3x14x3	
G:       2623    TTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAATCCC    2601      
                              |||X||X|||||||||||||X||
T:               -------------CAGaGGtGTGGTGTGGTGTCaGG--------------
R:         14   T2201030313112312320311101111011123203..3132.022..0    36        
--
>1030_3569_847_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223201111011123200013201..3020.210..0    33        
--
>1031_1904_624_F3	ENSMUST00000113126	-	2594	2633	7	46	50	170	1x7x1x4x1x2x2x12x1x1x3x5	
G:       2633    AAATTCCTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                       |X||||||XX|||XX|X|X|||||||||||XXX||X||||
T:               ------CtGGTGTAgaCAGagGtGtGGTGTGGTGTCaggGTgCTGG----
R:          7   T1300231310111313112300312101111011123320133.302..0    46        
--
>1031_1941_384_F3	ENSMUST00000113126	-	2602	2624	16	38	50	170	3x1x3x16	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                |||XX||X|||||||||||||||
T:               ---------------ACAgaGGtGTGGTGTGGTGTCAG------------
R:         16   T2310201030030303111320311101111011121221333.111..3    38        
--
>1031_3704_3860_F3	ENSMUST00000113126	-	2603	2625	15	37	50	170	3x2x14x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               |||X|X|||||||||||||X|||
T:               --------------GACaGaGGTGTGGTGTGGTgTCA-------------
R:         15   T0103201333301102122320111101111010121132333.232..1    37        
--
>1032_1623_896_F3	ENSMUST00000113126	+	2605	2623	23	41	50	160	12x7	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                                       ||||||||||||X||||||
T:               ----------------------ACACCACACCACaCCTCTG---------
R:         23   T23102010301301132323103111011110113102.213..201331    41        
--
>1032_2462_3913_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	2x3x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               ||X||X||X|||||||||||||
T:               --------------GAcAGaGGtGTGGTGTGGTGTC--------------
R:         15   T10302010300231320123203111011110111202.330..201132    36        
--
>1032_3243_1561_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x8x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X|||||||X|||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAG-------------
R:         14   T13020103031313231232031110111201112121.333..332213    37        
--
>1032_3286_4150_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x11x2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||||||X|X|||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGtAAT-------------
R:          9   T00133031111222232011110111232002123033.310..203331    37        
--
>1033_2269_4107_F3	ENSMUST00000113126	-	2604	2625	16	37	50	180	x16x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                X|||||||||||||||X|||||
T:               ---------------gACAGAGGTGTGGTGTgGTGTC-------------
R:         16   T00130201030313112112220111101112011123.020..222322    37        
--
>1034_1598_2481_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23302032321320013123203111011110111202.003...03330    36        
--
>1034_2546_2059_F3	ENSMUST00000113126	-	729	753	2	26	50	170	1x2x4x6x12	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGCGCCTGTGATCTGAGAGACAGGT    729       
                  |X|X|||X|||||X|||||||||||
T:               -CaGcAATaTGCAGgCAGTAGGCACT------------------------
R:          2   T13020103031312231213203112231302322302.303...22333    26        
--
>1034_3794_4400_F3	ENSMUST00000113126	-	2602	2623	16	37	50	180	3x11x8	
G:       2623    AATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                                |||X||||||||||X|||||||
T:               ---------------CAGaGGTGTGGTGTgGTGTCAG-------------
R:         16   T12120103032312231232011110111201112123.002...13112    37        
--
>1036_688_4721_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111232232031110111232000123003.332...02.23    36        
--
>1036_2480_1067_F3	ENSMUST00000113126	-	2604	2623	18	37	50	180	3x17	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                  |||X||||||||||||||||
T:               -----------------CAGaGGTGTGGTGTGGTGTC-------------
R:         18   T31230201030310312312320111101111011120.231...22.13    37        
--
>1037_3188_2362_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T233022103210300021232031110111101111022332..1122.3    39        
--
>1037_3336_1106_F3	ENSMUST00000113126	-	2604	2631	9	36	50	180	4x1x1x5x3x14	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                         ||||XXX||||X||X|||||||||||||
T:               --------GGTGtagACAGaGGtGTGGTGTGGTGTC--------------
R:          9   T333220103011013211232031110111101112012330..0331.1    36        
--
>1038_1307_61_F3	ENSMUST00000113126	-	2600	2629	12	41	50	170	2x2x2x3x11x6x4	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                            ||X|X|X||X||||||||||X|||||X|||
T:               -----------TGtAgAcAGaGGTGTGGTGTgGTGTCaGGG---------
R:         12   T02230201030313312312120111101112011120.3020..203.0    41        
--
>1038_3396_1723_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000131003.3021..122.2    33        
--
>1041_906_1248_F3	ENSMUST00000113126	+	2721	2738	5	22	50	160	7x11	
G:       2721    TTTAGGACATTTTTTAAATCATTGTGTCTAAGCATCTCAGAGTCAAGTGT    2738      
                     |||||||X||||||||||
T:               ----GGACATTtTTTAAATCAT----------------------------
R:          5   T13003021130200030032132032013311231111.223...0000.    22        
--
>1041_4250_559_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x9x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||||X|||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAAT-------------
R:          9   T00133031111222232031110111232200113031.032...0133.    37        
--
>1042_52_3858_F3	ENSMUST00000113126	-	2594	2618	22	46	50	160	1x15x1x8	
G:       2618    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                                      |X||||||||||||||XX|||||||
T:               ---------------------GtGTGGTGTGGTGTCAggGTGCTGG----
R:         22   T23302010300131111123233111011110111210.011..00102.    46        
--
>1043_1265_4023_F3	ENSMUST00000113126	-	2073	2095	13	35	50	170	5x1x2x15	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                             |||||XX|X||||||||||||||
T:               ------------GAGCTccAaCCACAGCTTTTGTA---------------
R:         13   T00133031111212232031110111232000113312.300...30..3    35        
--
>1043_2237_4568_F3	ENSMUST00000113126	+	2596	2615	14	33	50	160	4x5x11	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2615      
                              ||||X||||X||||||||||
T:               -------------AGCAcCCTGaCACCACACCA-----------------
R:         14   T11200103031313231200213111011110132331.112...12..0    33        
--
>1045_2468_3163_F3	ENSMUST00000113126	-	2604	2625	16	37	50	160	2x3x11x6	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAA    2604      
                                ||X||X||||||||||X|||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTC-------------
R:         16   T2330020103031331231232011110111201112..2333.232.23    37        
--
>1048_1810_2135_F3	ENSMUST00000113126	-	2600	2623	18	41	50	200	14x6x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  ||||||||||||||X|||||X|||
T:               -----------------CAGAGGTGTGGTGTgGTGTCaGGG---------
R:         18   T313302010303131123122201111011120111202003..33022.    41        
--
>1048_3322_361_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x11x5	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X||||||||||X||||
T:               -------------GAcAGaGGtGTGGTGTGGTgTCAG-------------
R:         14   T130201030313132312320311101111010121212110..20322.    37        
--
>1048_3643_2826_F3	ENSMUST00000113126	-	2061	2099	9	47	50	190	1x3x5x1x2x9x7x1x3x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X||X||||XX|X||||||||X||||||XX||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAAtcTGcCTGTTC---
R:          9   T001330311112322320311101112323001130002100..30233.    47        
--
>1049_197_3634_F3	ENSMUST00000113126	-	2073	2099	9	35	50	170	1x3x5x1x2x15	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTACATGAAGGAGATCTT    2073      
                         |X||X||||XX|X||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTA---------------
R:          9   T00133031111232232031110111232000113330.101..21103.    35        
--
>1049_2456_185_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111232232031110111232000103003.103..10301.    36        
--
>1049_2632_2456_F3	ENSMUST00000113126	-	2596	2625	16	45	50	190	2x3x11x7x7	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAA    2596      
                                ||X||X||||||||||X||||||X||||||
T:               ---------------GAcAGaGGTGTGGTGTgGTGTCAgGGTGCT-----
R:         16   T02330201030313312312320111101112011121.201..30302.    45        
--
>1050_2543_2461_F3	ENSMUST00000113126	+	216	245	8	37	50	152	4T1x3T1x1x6x12	
G:        216    TCAGGGAAGCAGTGGTGAGACGCAGGGCTACATATACGCCCAGTCTGTTG    245       
                        |||| |X|| |XX|||||X|||||||||||
T:               -------AGCATTgGTTAgaCGCAGgGCTACATATAC-------------
R:          8   T10013303231303010303133123032311333311.222...2222.    37        
--
>1050_2707_2532_F3	ENSMUST00000113126	-	91	124	2	35	50	186	4G3x2x4x3x2x2x13	
G:        124    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                  |||| |||X|X|||X||X|X|X||||||||||||
T:               -ATTCGTGTgTcATCaCTgGtCaCGTGTGACTGTC---------------
R:          2   T03302311131313231230223131111212112123.333...0233.    35        
--
>1050_3179_758_F3	ENSMUST00000113126	-	720	752	3	35	50	190	2x4x6x11x2x2x3x3	
G:        752    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                   ||X|||X|||||X||||||||||X|X|X||X||
T:               --AGcAATaTGCAGgCAGTAGGCACtGaCaTTgTC---------------
R:          3   T10220103031312231213203113111230012001.313...1023.    35        
--
>1052_643_3878_F3	ENSMUST00000113126	-	2604	2630	10	36	50	170	1x4x2x3x3x14	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                          |X|||X|X||X||X|||||||||||||
T:               ---------GtGTAgAcAGaGGtGTGGTGTGGTGTC--------------
R:         10   T233020113231133231232031110111101112322302.0.202..    36        
--
>1052_3449_5022_F3	ENSMUST00000113126	-	2429	2453	15	39	50	170	15x2x3x2x3	
G:       2453    GTGGGTACAACTGCACAGCAGGCACCGGTAAGAGGATTGCCCCTGCACTC    2429      
                               |||||||||||||||X|X||X|X||
T:               --------------ACAGCAGGCACCGGTaAgAGgAtTG-----------
R:         15   T002330201330013112312031103010012222001130.2.322..    39        
--
>1054_1325_1245_F3	ENSMUST00000113126	-	2224	2250	8	34	50	156	x4x1x5T3x13	
G:       2250    GGGGAGGACGCACGCACGCACGCACCCACGCATGCCAATGAGCCCATTCA    2224      
                        X|||XX|||| |||X||||||||||||
T:               -------aCGCacGCACTCACgCACCCACGCATG----------------
R:          8   T112330201330233112211131100113313123002001.03221..    34        
--
>1054_2214_1805_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T023302010303131123123201111011120111213203.13002..    38        
--
>1054_3836_4290_F3	ENSMUST00000113126	-	2606	2625	15	34	50	180	5x15	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||||||||||||||
T:               --------------GACAGaGGTGTGGTGTGGTG----------------
R:         15   T230320103030033211232011110111101101021013.33323..    34        
--
>1055_1986_2833_F3	ENSMUST00000113126	-	2591	2614	17	40	50	160	2x9x2x6x5	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCAAAG    2591      
                                 ||X||||||||X|X|||||X||||
T:               ----------------GGtGTGGTGTCaGgGTGCTgGGTA----------
R:         17   T001330311112022320311101112322011320001302...11...    40        
--
>1055_3065_2639_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T023302010303131123123201111011120111210302...02...    38        
--
>1056_3060_635_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T0013303111120223203111011123230011301011002.301...    36        
--
>1057_1481_3943_F3	ENSMUST00000113126	-	2602	2623	20	41	50	180	1x18x3	
G:       2623    AAGAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                    |X|||||||||||||||||X||
T:               -------------------CaGAGGTGTGGTGTGGTGTcAG---------
R:         20   T10033300030020100033022201111011110111012230.0233.    41        
--
>1057_3895_1410_F3	ENSMUST00000113126	+	2596	2619	14	37	50	180	4x5x12x3	
G:       2596    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                              ||||X||||X|||||||||||X||
T:               -------------AGCAcCCTGaCACCACACCACaCC-------------
R:         14   T20020101031313231300213111011110113103322320.2331.    37        
--
>1058_626_3279_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T00133031111232232031110111232300113000.2113312223.    36        
--
>1058_2249_942_F3	ENSMUST00000113126	+	766	788	5	27	50	156	4x2G2x14	
G:        766    GGGGAGGTCGACACGGATTTTCCGCCACTGGATTCCAATGAGCCCATTCA    788       
                     ||||X| ||X|||||||||||||
T:               ----AGGTcGGCAcGGATTTTCCGCCA-----------------------
R:          5   T00030201030313302300020330100101111200.1023320122.    27        
--
>1058_2843_4634_F3	ENSMUST00000113126	+	1836	1854	23	41	50	160	2x17	
G:       1836    TGGAGGGGCTGAGTGCTGCTCAGCCGTGTGTCCTGCCTGGCAGTCCCAGC    1854      
                                       ||X||||||||||||||||
T:               ----------------------GCcGTGTGTCCTGCCTGGC---------
R:         23   T20110201030313312312323313111112021302.0331322202.    41        
--
>1059_2374_1012_F3	ENSMUST00000113126	-	2600	2629	11	40	50	170	4x2x3x3x8x2x8	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                           ||||X|X||X||X|||||||X|X|||||||
T:               ----------TGTAgAcAGaGGtGTGGTGTgGtGTCAGGG----------
R:         11   T23302011303113023121203111011120211212.000.222313.    40        
--
>1059_2845_1455_F3	ENSMUST00000113126	+	532	557	8	33	50	160	3x1x5x4x2x11	
G:        532    TACTCCAAGTTTGATGGCAAGGGTCATGTGGGTACAACTGCAACTAAGAA    557       
                        |||XX||||X|||X|X||||||||||
T:               -------AGTttGATGgCAAgGgTCATGTGGGT-----------------
R:          8   T30000231213112312310303121311100110301.202.221320.    33        
--
>1060_574_336_F3	ENSMUST00000113126	-	731	754	1	24	50	160	x3x5x6x10	
G:        754    TCAGCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    731       
                 X||X||||X|||||X|||||||||
T:               tCAgCAATaTGCAGgCAGTAGGCA--------------------------
R:          1   T1211310303131233121320313121111131302..112...0321.    24        
--
>1060_3168_2940_F3	ENSMUST00000113126	+	2593	2619	11	37	50	170	1x3x4x1x3x15	
G:       2593    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                           |X||X|||XX||X||||||||||||||
T:               ----------CcCAgCACccTGaCACCACACCACACC-------------
R:         11   T3110201033210103112321311101111011110..231...0312.    37        
--
>1060_3749_155_F3	ENSMUST00000113126	-	2606	2623	18	35	50	160	3x15	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAA    2606      
                                  |||X||||||||||||||
T:               -----------------CAGaGGTGTGGTGTGGTG---------------
R:         18   T2123020103031311231232011110111101103..032...2003.    35        
--
>1060_3759_2180_F3	ENSMUST00000113126	+	2591	2622	9	40	50	172	x4A4G1x3x18	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                         X||| |||| |X||X|||||||||||||||||
T:               --------tACCAAGCAGCcTGaCACCACACCACACCTCT----------
R:          9   T1302010303101023123221311101111011110..102...3012.    40        
--
>1061_549_4929_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T00133031111202232031110111232003113000.1032..0232.    36        
--
>1061_598_1650_F3	ENSMUST00000113126	+	2382	2401	3	22	50	160	3x2x15	
G:       2382    CTCCTCATAGCAAGTATGATATGGTCAGCCTGCCTCTCTGACCTATCTCC    2401      
                   |||X|X||||||||||||||
T:               --CCTcAtAGCAAGTATGATAT----------------------------
R:          3   T10302010323102133123333131011123011212.2003..2332.    22        
--
>1061_1670_1809_F3	ENSMUST00000113126	-	2603	2625	14	36	50	170	2x3x3x15	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                              ||X||X||X||||||||||||||
T:               -------------GAcAGaGGtGTGGTGTGGTGTCA--------------
R:         14   T02020103032310231232031110111101112101.3022..0002.    36        
--
>1061_2120_2199_F3	ENSMUST00000113126	+	2066	2082	15	31	50	150	1x16	
G:       2066    TCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAA    2082      
                               |X|||||||||||||||
T:               --------------GgCAGATTACAAAAGCT-------------------
R:         15   T01302010303331133122303110002320003013.1332..2000.    31        
--
>1061_2537_4308_F3	ENSMUST00000113126	-	2068	2099	9	40	50	190	1x8x1x2x10x6x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAGATCTT    2068      
                         |X|||||||XX|X|||||||||X|||||X|||
T:               --------CtGAGAGCTccAaCCACAGCTTtTGTAAtCTG----------
R:          9   T00133031111222232031110111232030113002.2030..2233.    40        
--
>1061_3713_1299_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x8x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X|||||||X|||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAG-------------
R:         14   T23302103032310231232031110111201112121.0333..0103.    37        
--
>1062_1906_1487_F3	ENSMUST00000113126	+	2028	2044	3	19	50	150	11x6	
G:       2028    ACTATATTATCTTCCTTAAAATCTGTTCCCATATTGAACAGGCAGATTAC    2044      
                   |||||||||||X|||||
T:               --TATATTATCTTcCTTAA-------------------------------
R:          3   T30333330332203020303233111211211030022.312.332322.    19        
--
>1062_2193_4343_F3	ENSMUST00000113126	-	2603	2625	16	38	50	170	2x14x4x3	
G:       2625    GAAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                ||X|||||||||||||X|||X||
T:               ---------------GAcAGAGGTGTGGTGTgGTGtCA------------
R:         16   T01230201030313112312220111101112011221.200.032133.    38        
--
>1062_2275_388_F3	ENSMUST00000113126	-	2604	2629	11	36	50	160	x5x2x2x13x4	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                           X||||X|X|X||||||||||||X|||
T:               ----------tGTAGaCaGaGGTGTGGTGTGGtGTC--------------
R:         11   T23302010303113211223201111011110311203.123.232322.    36        
--
>1062_2706_838_F3	ENSMUST00000113126	-	2604	2625	14	35	50	160	2x3x3x14	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAATC    2604      
                              ||X||X||X|||||||||||||
T:               -------------GAcAGaGGtGTGGTGTGGTGTC---------------
R:         14   T13302010331310231232031110111101112321.333.203300.    35        
--
>1063_2605_4075_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T00133031111222232031110111232000111112.303...00.3.    34        
--
>1063_2655_2484_F3	ENSMUST00000113126	-	2605	2628	12	35	50	160	1x10x2x8x3	
G:       2628    AAATTCTAAACGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                            |X|||||||||X|X|||||||X||
T:               -----------GtAGACAGAGGtGtGGTGTGGtGT---------------
R:         12   T23102010303203221122203101011110311103.220...23.3.    35        
--
>1063_2714_2700_F3	ENSMUST00000113126	-	1400	1417	20	37	50	160	10x8	
G:       1417    CTTCCAGAAGGAGAAGAAATACGTGAGCTTAAACACCTGGCCTCTAGTCT    1400      
                                    ||||||||||X|||||||
T:               -------------------TACGTGAGCTtAAACACC-------------
R:         20   T31230333022330201030313112232330011101.120...22.0.    37        
--
>1063_4252_2917_F3	ENSMUST00000113126	-	2594	2614	16	36	50	170	2x2x17	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGAAATCCCTCAAAGA    2594      
                                ||X|X||||||||||||||||
T:               ---------------GGtGtGGTGTCAGGGTGCTGG--------------
R:         16   T01030321112312320310101112120011321012.033...20.0.    36        
--
>1064_2362_3380_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23302010300303022123203111011110111202.023...30...    36        
--
>1064_2712_2551_F3	ENSMUST00000113126	-	2603	2625	14	36	50	170	2x3x3x15	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAATC    2603      
                              ||X||X||X||||||||||||||
T:               -------------GAcAGaGGtGTGGTGTGGTGTCA--------------
R:         14   T03302210313230231232031110111101112131.311...01...    36        
--
>1064_3598_957_F3	ENSMUST00000113126	-	2602	2623	17	38	50	160	3x3x8x8	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 |||X||X|||||||X|||||||
T:               ----------------CAGaGGtGTGGTGTgGTGTCAG------------
R:         17   T23302010303133323123203111011100111212.033...30...    38        
--
>1065_2391_1580_F3	ENSMUST00000113126	-	707	753	2	48	50	196	2x1x4x6x10x1A5x4x1x3x1x2x6	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCGGCGT    707       
                  ||XX|||X|||||X|||||||||X |||||X|||XX||XX|X|||||
T:               -CAgcAATaTGCAGgCAGTAGGCAcAGACATtGTCatTGagCtTCGGC--
R:          2   T131301030313122312132031312211321120001313..03033.    48        
--
>1065_4217_2937_F3	ENSMUST00000113126	-	917	935	16	34	50	170	x19	
G:        935    AGATTACAAAAGCTGGTTGTCTACTTGGATAAGGCAATGTTTAGGGCTTA    917       
                                X||||||||||||||||||
T:               ---------------gTTGTCTACTTGGATAAGG----------------
R:         16   T021211302023130010112231201023302010303131..31222.    34        
--
>1066_415_1968_F3	ENSMUST00000113126	+	2282	2309	21	48	50	186	x7x13A7	
G:       2282    TAGCCTTCTAAGGCCTTCTCAACATGTCAGCGCCTGTGATCTGAGAGACA    2309      
                                     X||||||X|||||||||||| |||||||
T:               --------------------aACATGTcAGCGCCTGTGATATGAGAGA--
R:         21   T130201030313132312302011311112333021112333..3222..    48        
--
>1066_646_1115_F3	ENSMUST00000113126	-	2600	2625	15	40	50	180	10x6x2x5x3	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               ||||||||||X|||||X|X||||X||
T:               --------------GACAGAGGTGtGGTGTgGtGTCAgGG----------
R:         15   T233020103033311211222011010111202112130000..2313..    40        
--
>1066_1403_3263_F3	ENSMUST00000113126	+	1684	1706	19	41	50	156	2x4C13x3	
G:       1684    TGGACCGGAGTCCACCAGCATCCTGTAGTGCCGAGACCCGCAGGCACAGG    1706      
                                   ||X||| |||||||||||||X||
T:               ------------------CAtCCTCTAGTGCCGAGACCcGC---------
R:         19   T200201030313132312111202223211303222103332..2122..    41        
--
>1066_1904_4173_F3	ENSMUST00000113126	-	2069	2098	10	39	50	180	x8x1x2x12x4x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTAAGGAGATCTT    2069      
                          X|||||||XX|X|||||||||||X|||X||
T:               ---------tGAGAGCTccAaCCACAGCTTTTgTAAtCT-----------
R:         10   T001331311112222320311101112320003130022302..2033..    39        
--
>1067_3183_1269_F3	ENSMUST00000113126	-	2601	2629	12	40	50	170	2x2x2x3x11x2x7	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                            ||X|X|X||X||||||||||X|X||||||
T:               -----------TGtAgAcAGaGGTGTGGTGTgGtGTCAGG----------
R:         12   T132302010303133123123201111011120211212030.1332221    40        
--
>1067_3584_788_F3	ENSMUST00000113126	-	2604	2625	15	36	50	180	1x4x17	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||||||||||||||||
T:               --------------GaCAGaGGTGTGGTGTGGTGTC--------------
R:         15   T233020103013010311232011110111101112023123.1231132    36        
--
>1067_4256_551_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T001330311112022320311101112320000130021302.3003223    36        
--
>1068_933_3601_F3	ENSMUST00000113126	-	90	115	12	37	50	160	2x3x3x2x13x3	
G:        115    GCTCTGTATTTTCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATT    90        
                            ||X||X||X|X||||||||||||X||
T:               -----------TCaTCaCTgGtCACGTGTGACTGtCG-------------
R:         12   T2330201030022332312302211311112121223.3001..210.3.    37        
--
>1068_2087_4533_F3	ENSMUST00000113126	-	2593	2614	16	37	50	180	2x16x4	
G:       2614    CAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAGA    2593      
                                ||X|||||||||||||||X|||
T:               ---------------GGtGTGGTGTCAGGGTGCtGGG-------------
R:         16   T0103030311231232031110111212001130100.2030..101.1.    37        
--
>1068_2737_2743_F3	ENSMUST00000113126	-	2600	2623	18	41	50	170	3x11x6x4	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAA    2600      
                                  |||X||||||||||X|||||X|||
T:               -----------------CAGaGGTGTGGTGTgGTGTCaGGG---------
R:         18   T0233020103031311231232011110111201112.2002..230.2.    41        
--
>1069_587_803_F3	ENSMUST00000113126	-	2070	2098	10	38	50	190	3x5x1x2x7x11	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                          |||X||||XX|X||||||X||||||||||
T:               ---------TGAgAGCTccAaCCACAGcTTTTGTAATC------------
R:         10   T001333311112022320311101112020001130321001...3223.    38        
--
>1069_1003_2093_F3	ENSMUST00000113126	-	2590	2625	14	49	50	170	2x3x3x8x2x8x2x5x3	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTACC    2590      
                              ||X||X||X|||||||X|X|||||||X|X||||X||
T:               -------------GAcAGaGGtGTGGTGTgGtGTCAGGGtGcTGGGtAC-
R:         14   T230321030313132312320311101112021121200210...0031.    49        
--
>1069_3184_2264_F3	ENSMUST00000113126	-	2603	2620	21	38	50	160	11x7	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                     |||||||||||X||||||
T:               --------------------AGGTGTGGTGTgGTGTCA------------
R:         21   T302302010303130123123201111011120111213201...2022.    38        
--
>1069_4280_2642_F3	ENSMUST00000113126	+	2603	2622	21	40	50	160	2x12x6	
G:       2603    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                     ||X|||||||||||X|||||
T:               --------------------TGaCACCACACCACaCCTCT----------
R:         21   T120103001313233002133131110111101131022233...0211.    40        
--
>1070_2062_3722_F3	ENSMUST00000113126	-	2602	2634	6	38	50	170	1x4x4x2x3x2x1x2x14	
G:       2634    AAATTTCTGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                      |X|||X|||X|X||X|XX|X|||||||||||||
T:               -----TcTGGtGTAgAcAGaGgtGtGGTGTGGTGTCAG------------
R:          6   T23122012103113023123233131011110111212.020..23122.    38        
--
>1070_2312_2702_F3	ENSMUST00000113126	-	2604	2624	16	36	50	150	1x3x3x14	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                |X||X||X|||||||||||||
T:               ---------------AcAGaGGtGTGGTGTGGTGTC--------------
R:         16   T23302010302003332123203111011110111203.031..32031.    36        
--
>1070_3852_4146_F3	ENSMUST00000113126	+	2604	2624	22	42	50	160	1x16x4	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                                      |X|||||||||||||||X|||
T:               ---------------------GaCACCACACCACACCTcTGT--------
R:         22   T23302010322303300323203111011110111102.211..00031.    42        
--
>1071_3478_4341_F3	ENSMUST00000113126	-	721	746	9	34	50	160	6x11x1x1x2x5	
G:        746    CCTTCTAAATGCAGGCAGTAGGCACTGACATTGTGATCTGAGAGACAGGT    721       
                         ||||||X||||||||||XXX|X||||
T:               --------ATGCAGgCAGTAGGCACtgaCaTTGT----------------
R:          9   T3330201303131223121320311101123011300.2331...32.2.    34        
--
>1072_3000_3745_F3	ENSMUST00000113126	-	2602	2626	13	37	50	176	3x3C2x16	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                             |||X|| ||X|||||||||||||||
T:               ------------AGAcAGCGGtGTGGTGTGGTGTCAG-------------
R:         13   T23211010323122231233031110111101112123.111.2.0220.    37        
--
>1072_3844_1586_F3	ENSMUST00000113126	-	2601	2623	18	40	50	200	14x9	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  ||||||||||||||X||||||||
T:               -----------------CAGAGGTGTGGTGTgGTGTCAGG----------
R:         18   T02330201030313112312220111101112011121.223.3.1111.    40        
--
>1073_291_2676_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x11x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||||X||||
T:               --------CtGAGAGCTccAaCCACAGCTTTtGTAA--------------
R:          9   T0013303111122223203111011123200111300..102...0213.    36        
--
>1073_1233_4261_F3	ENSMUST00000113126	-	2071	2099	9	37	50	150	1x3x5x1x2x11x2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||X|X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAAT-------------
R:          9   T0013303111120223203111011123200310303..303...1221.    37        
--
>1073_1441_2418_F3	ENSMUST00000113126	-	2066	2099	9	42	50	200	1x8x1x2x10x6x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCGAGATCTT    2066      
                         |X|||||||XX|X|||||||||X|||||X|||||
T:               --------CtGAGAGCTccAaCCACAGCTTtTGTAAtCTGCC--------
R:          9   T0013303111122223203111011123203011300..230...0313.    42        
--
>1073_2101_1150_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223203111011123200010101..210...1213.    33        
--
>1073_2862_4231_F3	ENSMUST00000113126	-	2599	2623	18	42	50	190	14x6x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                  ||||||||||||||X|||||X||||
T:               -----------------CAGAGGTGTGGTGTgGTGTCaGGGT--------
R:         18   T0233020103031311231222011110111201112..301...1230.    42        
--
>1073_3178_3303_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T0013303111122223203111011123200013211..102...1222.    33        
--
>1074_2678_713_F3	ENSMUST00000113126	+	2223	2252	9	38	50	180	1x4x3x1x3x9x9	
G:       2223    GCGTAAGTGCATGCGTGGGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTAG    2252      
                         |X|||X||XX||X||||||||X||||||||
T:               --------GcATGcGTggGTgCGTGCGTGcGTGCGTGC------------
R:          9   T13201130201312310301233113311031133113.3311..22.20    38        
--
>1075_2151_3005_F3	ENSMUST00000113126	-	2590	2612	18	40	50	170	x13x10	
G:       2612    CAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCCCTCAAAGA    2590      
                                  X||||||||||||X|||||||||
T:               -----------------tGTGGTGTCAGGGtGCTGGGTAC----------
R:         18   T0103031311231232031110111212000132100..033...0132.    40        
--
>1075_2731_2434_F3	ENSMUST00000113126	-	2391	2412	15	36	50	160	6x2x9x5	
G:       2412    CCTGCACTCCAGCCGCAGGCTGACCATATCATACTTCGTGGTGACCATGG    2391      
                               ||||||X|X||||||||X||||
T:               --------------GCAGGCtGaCCATATCAtACTT--------------
R:         15   T0201030303132323120331010133321031202..300...3132.    36        
--
>1076_2471_723_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x12x2x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X|||||||||||X|X||
T:               --------CtGAGAGCTccAaCCACAGCTTTTgTaAT-------------
R:          9   T0013303111122223203111011123200021103..100...3302.    37        
--
>1076_2576_1731_F3	ENSMUST00000113126	-	2592	2623	18	49	50	190	14x4x6x5x3	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTA    2592      
                                  ||||||||||||||X|||X|||||X||||X||
T:               -----------------CAGAGGTGTGGTGTgGTGtCAGGGtGCTGgGT-
R:         18   T0233020103031311231222011110111201132..002...3201.    49        
--
>1076_3875_2807_F3	ENSMUST00000113126	-	164	186	15	37	50	170	3x8x8x4	
G:        186    TCAGCCAACAGGAGGCACTGACGGAGGATGAGTCTTCTCCTATCTCCCCC    164       
                               |||X|||||||X|||||||X|||
T:               --------------GCAcTGACGGAgGATGAGTcTTC-------------
R:         15   T1313010303131123122121302002312213202..103...0202.    37        
--
>1077_2007_1324_F3	ENSMUST00000113126	-	2587	2615	19	47	50	170	1x2x13x1x6x6	
G:       2615    TAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTGCTGGGTACCTTTCA    2587      
                                   |X|X||||||||||||XX|||||X|||||
T:               ------------------TgGtGTGGTGTCAGGGtgCTGGGtACCTT---
R:         19   T130201030313132312320311101112120020321003.3.10.0.    47        
--
>1077_2769_148_F3	ENSMUST00000113126	-	2601	2623	17	39	50	176	5A8x9	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 ||||| ||||||||X||||||||
T:               ----------------CAGAGATGTGGTGTgGTGTCAGG-----------
R:         17   T333020103002311331222231110111301112120232.1.22.2.    39        
--
>1078_1102_3675_F3	ENSMUST00000113126	-	2592	2612	22	42	50	160	15x2x4	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2592      
                                      |||||||||||||||X|X|||
T:               ---------------------TGTGGTGTCAGGGTGcTgGGT--------
R:         22   T22220113031313231232031110111212001102.001...03.1.    42        
--
>1078_2459_3621_F3	ENSMUST00000113126	-	2603	2620	20	37	50	160	2x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    ||X|||||||||||||||
T:               -------------------AGgTGTGGTGTGGTGTCA-------------
R:         20   T02330201030313302313221111011110111210.213...21.2.    37        
--
>1078_2872_456_F3	ENSMUST00000113126	-	2071	2099	9	37	50	190	1x8x1x2x10x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X|||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTTtTGTAAT-------------
R:          9   T00133031111222232031110111232010113030.303...12.3.    37        
--
>1078_3239_901_F3	ENSMUST00000113126	-	2602	2625	14	37	50	160	2x3x3x8x8	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAATC    2602      
                              ||X||X||X|||||||X|||||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAG-------------
R:         14   T13302013031310231232031110111301112122.000...21.2.    37        
--
>1078_4299_464_F3	ENSMUST00000113126	-	2059	2099	9	49	50	180	1x3x5x1x2x13x3x4x1x8	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCAAT    2059      
                         |X||X||||XX|X||||||||||||X||X|||XX|||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAtCTGccTGTTCAA-
R:          9   T00133031111202232011110111232000133002.301...02.3.    49        
--
>1079_842_1982_F3	ENSMUST00000113126	-	718	753	2	37	50	166	1x2x4x6x11x1x1x2T2x5	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                  |X|X|||X|||||X||||||||||XXX| ||X||||
T:               -CaGcAATaTGCAGgCAGTAGGCACtgaCTTTgTCAT-------------
R:          2   T13320103031312231213203111001200012133.331...2222.    37        
--
>1079_977_3467_F3	ENSMUST00000113126	-	2066	2098	10	42	50	200	x4x4x1x9x11x4	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCGAGATCTT    2066      
                          X|||X|||XX||||||||X||||||||||X|||
T:               ---------tGAGaGCTccAACCACAGcTTTTGTAATCtGCC--------
R:         10   T22013331011223232031010111202000113032.230...2132.    42        
--
>1079_1512_629_F3	ENSMUST00000113126	-	2070	2099	9	38	50	160	1x3x5x1x2x11x2x5	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||||||X|X||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAATC------------
R:          9   T00133031111202232031110111232003123032.203...3202.    38        
--
>1079_1696_1236_F3	ENSMUST00000113126	-	2060	2099	9	48	50	166	1x3x5x1x2x11x2x4x4G6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X||X||||XX|X||||||||||X|X|||X||| ||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGtAATcTGCGTGTTCA--
R:          9   T00133031111202232031110111232001133033.233...3213.    48        
--
>1079_1994_4497_F3	ENSMUST00000113126	-	2595	2623	18	46	50	176	6x10x6A6	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAA    2595      
                                  ||||||X|||||||||X||||| ||||||
T:               -----------------CAGAGGtGTGGTGTGGtGTCAGAGTGCTG----
R:         18   T32030201030313112312220311101111021121.221...0221.    46        
--
>1079_3902_4233_F3	ENSMUST00000113126	-	2061	2099	9	47	50	190	1x3x5x1x2x7x9x2x9	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCCTT    2061      
                         |X||X||||XX|X||||||X||||||||X|X||||||||
T:               --------CtGAgAGCTccAaCCACAGcTTTTGTAAtCtGCCTGTTC---
R:          9   T00133031111202232031110111222000113002.330...2233.    47        
--
>1080_80_3351_F3	ENSMUST00000113126	-	91	116	11	36	50	160	2x2x2x3x2x15	
G:        116    GCTCTGTATTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATT    91        
                           ||X|X|X||X|X||||||||||||||
T:               ----------GTcAtCaCTgGtCACGTGTGACTGTC--------------
R:         11   T2330201030313112312302211311112121121.2230...11.3.    36        
--
>1080_294_3575_F3	ENSMUST00000113126	-	2597	2612	22	37	50	160	16	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCAAAAAATCCCTCA    2597      
                                      ||||||||||||||||
T:               ---------------------TGTGGTGTCAGGGTGC-------------
R:         22   T1102010303131323123233111011121200113.2221...33.3.    37        
--
>1081_1414_522_F3	ENSMUST00000113126	-	719	750	5	36	50	200	4x6x11x2x2x4x3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     ||||X|||||X||||||||||X|X|X|||X||
T:               ----CAATaTGCAGgCAGTAGGCACtGaCaTTGtCA--------------
R:          5   T000201030313122312132031131113301321002330.3.2122.    36        
--
>1081_2465_4724_F3	ENSMUST00000113126	+	2605	2621	23	39	50	170	17	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2621      
                                       |||||||||||||||||
T:               ----------------------ACACCACACCACACCTC-----------
R:         23   T200331231310133112332031110111101111022122.2.2010.    39        
--
>1081_3118_2887_F3	ENSMUST00000113126	-	2604	2632	8	36	50	170	1x2x4x2x3x3x14	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                        |X|X|||X|X||X||X|||||||||||||
T:               -------TgGtGTAgAcAGaGGtGTGGTGTGGTGTC--------------
R:          8   T333020100031130231232031110111101112022233.2.0222.    36        
--
>1082_2152_1275_F3	ENSMUST00000113126	-	719	750	5	36	50	186	x4x6x11x2x5T3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     X|||X|||||X||||||||||X|X|||| |||
T:               ----cAATaTGCAGgCAGTAGGCACtGaCATTTTCA--------------
R:          5   T212201030313122312132031131111300021220123.3031...    36        
--
>1083_4153_3007_F3	ENSMUST00000113126	-	719	750	5	36	50	200	4x6x11x2x2x3x4	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                     ||||X|||||X||||||||||X|X|X||X|||
T:               ----CAATaTGCAGgCAGTAGGCACtGaCaTTgTCA--------------
R:          5   T1322010303131223121320311111123001210..331...22232    36        
--
>1084_1724_1161_F3	ENSMUST00000113126	+	669	697	7	35	50	156	1x4x4x2x1A11x5	
G:        669    CTCATCGGGCTCATCTGTTGGCAGTACACGAGTGAAGGACGGGAGCCGAA    697       
                       |X|||X|||X|X |||||||||||X||||
T:               ------GgGCTcATCtGtAGGCAGTACACGaGTGA---------------
R:          7   T2323010303231323123203121311133211220.3000...22.2.    35        
--
>1085_2627_1183_F3	ENSMUST00000113126	-	2591	2631	7	47	50	176	2x2C1x2x3x2x1x10x7x1x9	
G:       2631    ATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATCC    2591      
                       ||X| |X|X||X|XX|||||||||X||||||XX||||||||
T:               ------GGtGCAgAcAGaGgtGTGGTGTGGtGTCAGGgtGCTGGGTA---
R:          7   T10201030313112312323311101111021121203.33210.23.2.    47        
--
>1088_1238_322_F3	ENSMUST00000113126	-	2602	2620	23	41	50	170	4x15	
G:       2620    AAGAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAA    2602      
                                       ||||X||||||||||||||
T:               ----------------------AGGTgTGGTGTGGTGTCAG---------
R:         23   T102101011320201000330132012110111101112122..330.11    41        
--
>1088_3260_3892_F3	ENSMUST00000113126	-	1923	1950	14	41	50	180	3x3x1x11x6x4	
G:       1950    CTGGAGAGCACGCAGAGAAATGTACACTTTTGTTCTTTGTTCCTGGTTCG    1923      
                              |||X||XX||||||||||X|||||X|||
T:               -------------AGAgAAatGTACACTTTTgTTCTTtGTT---------
R:         14   T120103031313232232031113111200001022021102..031.01    41        
--
>1089_3741_2852_F3	ENSMUST00000113126	-	2597	2627	6	36	50	170	3x4x2x2x1x3x9x7	
G:       2627    AAACATAGACAGAGGTGTGGTGTGGTGTCAGGGTGCAAAAAATCCCTCAA    2597      
                      |||X|||X|X|XX||X||||||||X||||||
T:               -----TAGaCAGaGgTgtGGtGTGGTGTCaGGGTGC--------------
R:          6   T102210320112123123103111011120200113023212223201.2    36        
--
>1090_856_2626_F3	ENSMUST00000113126	+	336	357	25	46	50	170	7x15	
G:        336    AGATTAGAACGACTCCGCAAAGAGAGACAAAACCAGATCAAATGCAAAAA    357       
                                         |||||||X||||||||||||||
T:               ------------------------AGACAAAaCCAGATCAAATGCA----
R:         25   T233020131131123122320231322110031012232100...02...    46        
--
>1091_1598_518_F3	ENSMUST00000113126	+	2201	2220	13	32	50	160	2x4x14	
G:       2201    GGAATTGAGGACCTAGCATGTGCCCAGCGTAAGTGCATGCGTGGGTGCGT    2220      
                             ||X|||X|||||||||||||
T:               ------------CTaGCAtGTGCCCAGCGTAA------------------
R:         13   T01000210301312123111113001233130110210231313.03.2.    32        
--
>1091_2720_3915_F3	ENSMUST00000113126	-	2592	2614	20	42	50	170	2x13x2x6	
G:       2614    TAAACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2592      
                                    ||X||||||||||||X|X|||||
T:               -------------------GGtGTGGTGTCAGGGtGcTGGGT--------
R:         20   T13111103031313231232031110111212002122100112.02.1.    42        
--
>1091_3474_3561_F3	ENSMUST00000113126	-	2599	2620	21	42	50	160	2x9x8x3	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                     ||X||||||||X|||||||X||
T:               --------------------AGgTGTGGTGTgGTGTCAGgGT--------
R:         21   T02330201030313012312323111101112011121230131.11.3.    42        
--
>1092_291_478_F3	ENSMUST00000113126	-	91	124	2	35	50	166	3x2x2C2x4x3x2x2x13	
G:        124    CATTCCTGTGTCATCACTGGTCACGTGTGACTGTCATATCTTTGAAATTG    91        
                  |||X|X| ||X|||X||X|X|X||||||||||||
T:               -ATTcCtGCGTcATCaCTgGtCaCGTGTGACTGTC---------------
R:          2   T0330101133131323123022313111121211200.11013.33003.    35        
--
>1093_3165_360_F3	ENSMUST00000113126	+	1419	1455	2	38	50	182	1x4x2x3G1A6x1x14x3	
G:       1419    TCTAAGCAGCCATGACTACAAGCACCTGTACTTCGAGTCCGACGCAGCCA    1455      
                  |X|||X|X|| | ||||||XX|||||||||||||X||
T:               -CtAAGcAgCCGTAACTACAagCACCTGTACTTCGaGT------------
R:          2   T313302013303130123113031102113120230213331.3.03...    38        
--
>1095_1919_2982_F3	ENSMUST00000113126	-	90	116	10	36	50	170	2x4x3x2x2x14	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGTATCTTTGAAATTG    90        
                          ||X|||X||X|X|X|||||||||||||
T:               ---------GTcATCaCTgGtCaCGTGTGACTGTCG--------------
R:         10   T1302010303131323123022213111121211233.2312.3231...    36        
--
>1097_2621_803_F3	ENSMUST00000113126	-	2602	2625	15	38	50	160	x5x3x10x6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                               X||||X||X|||||||||X|||||
T:               --------------gACAGaGGtGTGGTGTGGtGTCAG------------
R:         15   T233020103033310211232031110111102112123033.3223...    38        
--
>1098_1244_4833_F3	ENSMUST00000113126	+	1612	1637	22	47	50	176	1x16x2T6	
G:       1612    AGGAGAAGAAATCAGGGCAGCAGTGACACTGGCCTCTAGTCTGGTGCCAC    1637      
                                      |X|||||||||||||||X| ||||||
T:               ---------------------AgTGACACTGGCCTCTAgTTTGGTGC---
R:         22   T311201030313132312310331121112103022230100.2113..2    47        
--
>1099_1557_3034_F3	ENSMUST00000113126	-	272	295	11	34	50	180	7x6x2x9	
G:        295    GTGTTTAGGACGTCTTCTAATACCAAAGTCCCAGGCATCTCAGAGTCAAG    272       
                           |||||||X|||||X|X||||||||
T:               ----------CGTCTTCtAATACcAaAGTCCCAG----------------
R:         11   T010333131123122023303311120212001213030131...31...    34        
--
>1100_486_1982_F3	ENSMUST00000113126	+	939	968	19	48	50	206	4x1x16A2x6	
G:        939    ATCCAAGTAGACAACACAAAGGTCACCATGAAGGAGATCTTGCTCAAGGC    968       
                                   ||||XX||||||||||||||| ||X|||||
T:               ------------------AAGGtcACCATGAAGGAGATCATGcTCAAG--
R:         19   T10331010303113123320203111013120202223213112210223    48        
--
>1100_2512_1924_F3	ENSMUST00000113126	+	1034	1072	12	50	50	196	2x3x2G1x3x3x3x2x12x7	
G:       1034    GAGAAGCAGAGTGAGCCTAACATCGCTGTGGACCTGGAGAGCACGCTGGA    1072      
                            ||X||X| |X||X||X||X|X|||||||||||X||||||
T:               -----------TGaGCcTGAcATcGCtGTgGaCCTGGAGAGCAcGCTGGA
R:         12   T03322212031313231212213033111200102102222313332102    50        
--
>1100_3757_1441_F3	ENSMUST00000113126	-	731	750	5	24	50	160	4x6x10	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    731       
                     ||||X|||||X|||||||||
T:               ----CAATaTGCAGgCAGTAGGCA--------------------------
R:          5   T03122103031312231213203131211230332313002103230312    24        
--
>1103_1375_2248_F3	ENSMUST00000113126	-	88	114	12	38	50	170	2x2x3x2x2x16	
G:        114    CTCTGTATTTGCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    88        
                            ||X|X||X|X|X|||||||||||||||
T:               -----------CAtCaCTgGtCaCGTGTGACTGTCGAA------------
R:         12   T233021103313122312302221311112121123200131...13...    38        
--
>1105_2529_2982_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	3x11x7	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  |||X||||||||||X||||||
T:               -----------------CAGaGGTGTGGTGTgGTGTCA------------
R:         18   T02033201030313112312320111101112011121330220232120    38        
--
>1105_3661_2095_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x8x1x2x10x2x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X|||||||||X|X|||
T:               --------CtGAGAGCTccAaCCACAGCTTtTgTAA--------------
R:          9   T00133031111222232031110111232030013000333223100320    36        
--
>1106_321_3903_F3	ENSMUST00000113126	-	2592	2612	22	42	50	170	13x5x3	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTATCCCTCA    2592      
                                      |||||||||||||X||||X||
T:               ---------------------TGTGGTGTCAGGGtGCTGgGT--------
R:         22   T132301030313112312320311101112120021321201..113...    42        
--
>1106_1524_895_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T323020103031333231232031110111101112322300..223...    36        
--
>1107_44_1409_F3	ENSMUST00000113126	+	660	677	22	39	50	170	18	
G:        660    ATGGCCAGCGCCAGGGTGCAGGACCTCATCGGGCTCATCTGTTGGCAGTA    677       
                                      ||||||||||||||||||
T:               ---------------------GACCTCATCGGGCTCATC-----------
R:         22   T1312001103031312231111210221323003221.2310...33...    39        
--
>1107_853_2922_F3	ENSMUST00000113126	+	786	804	22	40	50	160	3x16	
G:        786    GAGGTCGACACGGATTTTCCGCCACTGGATTCCAATGAGCCCATTCATAA    804       
                                      |||X|||||||||||||||
T:               ---------------------CCAcTGGATTCCAATGAGC----------
R:         22   T2033020103031333231212012210230201031.2312...30...    40        
--
>1107_3031_4533_F3	ENSMUST00000113126	-	2603	2618	22	37	50	160	16	
G:       2618    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                      ||||||||||||||||
T:               ---------------------GTGTGGTGTGGTGTCA-------------
R:         22   T1112323302020303131123111101111011121.2333...21...    37        
--
>1108_4088_2900_F3	ENSMUST00000113126	-	2601	2622	18	39	50	180	2x3x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  ||X||X||||||||||||||||
T:               -----------------AGaGGtGTGGTGTGGTGTCAGG-----------
R:         18   T3321201032311332302320311101111011121202330.11030.    39        
--
>1109_152_2490_F3	ENSMUST00000113126	-	2605	2626	14	35	50	160	1x5x3x13	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                              |X||||X||X||||||||||||
T:               -------------AgACAGaGGtGTGGTGTGGTGT---------------
R:         14   T03302010323301021123203111011110111102.323..1320..    35        
--
>1109_1756_881_F3	ENSMUST00000113126	-	720	750	5	35	50	190	x4x10x6x1x1x9	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                     X|||X|||||||||X|||||XXX||||||||
T:               ----cAATaTGCAGGCAGtAGGCActgACATTGTC---------------
R:          5   T11220103031312031233203133221130112322.121..3301..    35        
--
>1109_2452_2252_F3	ENSMUST00000113126	-	2593	2614	17	38	50	160	2x13x2x5	
G:       2614    ACAATCAGCCCAGGAGGGTGTGGTGTCAGGGTGCTGGGAATCCCTCAAAG    2593      
                                 ||X||||||||||||X|X||||
T:               ----------------GGtGTGGTGTCAGGGtGcTGGG------------
R:         17   T02233031111212232031110111212003102100.132..3223..    38        
--
>1110_3740_1606_F3	ENSMUST00000113126	-	930	959	14	43	50	200	3x2x4x4x6x11	
G:        959    TCTGTTCCCATATGATCTCCTTCATGGTGACCTTTGTGTTGTCGAGCTCT    930       
                              |||X|X|||X|||X|||||X||||||||||
T:               -------------GATcTcCTTcATGgTGACCtTTGTGTTGTC-------
R:         14   T2311201303131023121020113111121010011110112.110..0    43        
--
>1110_3868_1831_F3	ENSMUST00000113126	-	2603	2625	15	37	50	176	8x10A4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                               ||||||||X||||||||| ||||
T:               --------------GACAGAGGtGTGGTGTGGAGTCA-------------
R:         15   T2333101030333112112220311101111022121330232.230..2    37        
--
>1110_4037_1569_F3	ENSMUST00000113126	+	2595	2622	13	40	50	166	5x1G2x3x8x8	
G:       2595    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                             |||||X ||X||X|||||||X|||||||
T:               ------------CAGCAcGCTgACaCCACACCaCACCTCT----------
R:         13   T1302010303131123103320213101111031110222030.032..2    40        
--
>1111_2099_1722_F3	ENSMUST00000113126	-	2603	2617	23	37	50	150	15	
G:       2617    AAATTCTAAACAATCAGCCCAGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                       |||||||||||||||
T:               ----------------------TGTGGTGTGGTGTCA-------------
R:         23   T2330102030020100003320311101111011121.00033..122..    37        
--
>1112_930_1570_F3	ENSMUST00000113126	+	112	135	14	37	50	160	4x2x1x4x13	
G:        112    CACGTGACCAGTGATGACACAGGAATGTGTGAGATGGTTCTCATTGATCA    135       
                              ||||X|XX|||X||||||||||||
T:               -------------ATGAcAcaGGAaTGTGTGAGATGG-------------
R:         14   T02330201030313312313020213111112223103302023333...    37        
--
>1112_1353_2181_F3	ENSMUST00000113126	-	2072	2095	13	36	50	160	5x1x2x9x7	
G:       2095    TTCTCCCTTATCGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                             |||||XX|X||||||||X||||||
T:               ------------GAGCTccAaCCACAGCTtTTGTAA--------------
R:         13   T00133031111212232031110111232300113003230313012...    36        
--
>1112_3337_4936_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111232232031110111232000313000132203202...    36        
--
>1113_1755_2792_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	7x11	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       |||||||X||||||||||
T:               ----------------------ACACCACaCCACACCTCT----------
R:         23   T2330201030333211112320311101131011110222201.0322..    40        
--
>1113_2702_4207_F3	ENSMUST00000113126	-	2599	2629	11	41	50	210	x4x2x3x3x19	
G:       2629    AAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                           X|||X|X||X||X||||||||||||||||||
T:               ----------tGTAgAcAGaGGtGTGGTGTGGTGTCAGGGT---------
R:         11   T2031201230311302312320311101111011121200101.3212..    41        
--
>1113_2849_3672_F3	ENSMUST00000113126	-	2601	2623	17	39	50	170	3x3x10x7	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                 |||X||X|||||||||X||||||
T:               ----------------CAGaGGtGTGGTGTGGtGTCAGG-----------
R:         17   T2330201030333300012320311101111021121203222.0330..    39        
--
>1113_2923_3771_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T0013303111123223203111011123230011300123033.2112..    36        
--
>1114_81_3257_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T001330311112022320311101112320001030303212..213...    37        
--
>1114_1314_4381_F3	ENSMUST00000113126	-	718	751	4	37	50	180	1x4x6x11x2x3x2x1x4	
G:        751    CCTGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                    |X|||X|||||X||||||||||X|X||X|XX|||
T:               ---GcAATaTGCAGgCAGTAGGCACtGaCAtTgtCAT-------------
R:          4   T200311030313123312132031131111202021332230..311...    37        
--
>1114_2342_2822_F3	ENSMUST00000113126	+	2665	2684	23	42	50	160	3x2x15	
G:       2665    CAGACCTCACCATGGTCCCGCCTGTGGCAGCATCCTTGGGCCAGGGCCAC    2684      
                                       |||X|X||||||||||||||
T:               ----------------------TGTgGcAGCATCCTTGGGCC--------
R:         23   T330303131123123311123331120112313202010030..202...    42        
--
>1115_3682_667_F3	ENSMUST00000113126	-	1433	1464	5	36	50	166	1x3x4x5x1x1x1A15	
G:       1464    CAAACTGCGTCGGACTCGAAGTACAGGTGCTTGTAGCAGAAGGAGAAGAA    1433      
                     |X||X|||X||||XXX |||||||||||||||
T:               ----CtGCgTCGgACTCgaaATACAGGTGCTTGTAG--------------
R:          5   T010303131123121221330331120113201132233012..223...    36        
--
>1115_4018_3793_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T001330311112222320311101112320001010101110..330...    33        
--
>1115_4035_3717_F3	ENSMUST00000113126	-	725	750	5	30	50	166	4x5A11x2x3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACACTGTGATCTGAGAGACAGGT    725       
                     ||||X|||| |||||||||||X|X||
T:               ----CAATaTGCAAGCAGTAGGCACtGaCA--------------------
R:          5   T130221030313102312132031131111100203122033..033...    30        
--
>1116_2585_4303_F3	ENSMUST00000113126	-	2594	2612	22	40	50	170	11x8	
G:       2612    TAAACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGAAATCCCTCA    2594      
                                      |||||||||||X|||||||
T:               ---------------------TGTGGTGTCAGgGTGCTGG----------
R:         22   T101201030323132312320311101112123011321023..030..1    40        
--
>1118_217_3064_F3	ENSMUST00000113126	-	2060	2099	9	48	50	166	1x8x1x2x7x2x7x1x3A7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGCCTGTTCATT    2060      
                         |X|||||||XX|X||||||X|X||||||XX|| |||||||
T:               --------CtGAGAGCTccAaCCACAGcTtTTGTAAtcTGACTGTTCA--
R:          9   T0013303111122223203111011120230011300..3212..221.1    48        
--
>1118_233_1420_F3	ENSMUST00000113126	-	2594	2625	15	46	50	166	1x4x3x14x3A6	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGAAAT    2594      
                               |X|||X||X|||||||||||||X|| ||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTCaGGATGCTGG----
R:         15   T1330201031033103112320311101111011122..2313..023.1    46        
--
>1118_1067_3117_F3	ENSMUST00000113126	+	1460	1482	19	41	50	170	10x7x6	
G:       1460    CCTGTACTTCGAGTCCGACGCAGCCACAGTCAGTGAGATCGTGCTCAAGG    1482      
                                   ||||||||||X||||||X|||||
T:               ------------------CGCAGCCACAgTCAGTGaGATCG---------
R:         19   T1320103031313231232331230111112121132..0323..133.1    41        
--
>1118_1359_3415_F3	ENSMUST00000113126	-	2250	2266	12	28	50	150	8x9	
G:       2266    TGCATATTGCTGGCTACGCACGCACGCACGACACGGATTTTCCGCCACTG    2250      
                            ||||||||X||||||||
T:               -----------GGCTACGCaCGCACGCA----------------------
R:         12   T1202330201030323133313311331000232213..2020..233.2    28        
--
>1118_1917_1012_F3	ENSMUST00000113126	-	753	795	5	47	50	182	x15x3A1x6T3x2x1x4x6	
G:        795    AGTGAATCCAGTGGCGGAAAATCCGTGTCGACCTCCCCATCATCCTCTTC    753       
                     X||||||||||||||X|| |X||||| |||X|XX|||X|||||
T:               ----aATCCAGTGGCGGAAaATACgTGTCGTCCTcCccATCaTCCTC---
R:          5   T2112103201211033020103311111231202103..3203..223.3    47        
--
>1118_2734_1916_F3	ENSMUST00000113126	-	2605	2627	13	35	50	170	4x3x5x11	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                             ||||X||X||||X||||||||||
T:               ------------TAGAcAGaGGTGtGGTGTGGTGT---------------
R:         13   T2330202030313322312320113101111011130..3101..232.3    35        
--
>1118_2784_2683_F3	ENSMUST00000113126	-	2212	2244	14	46	50	176	4x15x2x1x1G9	
G:       2244    GGGGAGGTCGACAGCACGCACGCACCCACGCATGCACTTACGCTGGTTCA    2212      
                              ||||X||||||||||||||X|XX |||||||||
T:               -------------GCACgCACGCACCCACGCAtGcaGTTACGCTGG----
R:         14   T0033201030303131123113311001133121222..1133..312.3    46        
--
>1118_3949_4690_F3	ENSMUST00000113126	-	2603	2630	10	37	50	160	2x1x2x3x2x3x15	
G:       2630    AAATTCTAAGTGTAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                          ||XX|X||X|X||X||||||||||||||
T:               ---------GTgtAgACaGaGGtGTGGTGTGGTGTCA-------------
R:         10   T1201032013102312122120311101111011121..1232..113.3    37        
--
>1119_2206_1576_F3	ENSMUST00000113126	-	2603	2626	14	37	50	166	3x2T3x15	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                              |||X| |||X||||||||||||||
T:               -------------AGAcATAGGtGTGGTGTGGTGTCA-------------
R:         14   T033020132033102231332031110111101112131200..03023.    37        
--
>1119_2616_3479_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T001330311112022320311101112321001130113303..32022.    36        
--
>1119_2780_1416_F3	ENSMUST00000113126	-	2603	2623	18	38	50	170	14x2x5	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                  ||||||||||||||X|X||||
T:               -----------------CAGAGGTGTGGTGTgGtGTCA------------
R:         18   T022302010303130123122201111011120211213321..13212.    38        
--
>1119_3123_696_F3	ENSMUST00000113126	-	87	116	10	39	50	180	2x2x2x3x2x2x17	
G:        116    CTCTGTATTGTCATCACTGGTCACGTGTGACTGTCGAATCTTTGAAATTG    87        
                          ||X|X|X||X|X|X||||||||||||||||
T:               ---------GTcAtCaCTgGtCaCGTGTGACTGTCGAAT-----------
R:         10   T112201030313112312302231311112121123203113..32033.    39        
--
>1119_3293_1701_F3	ENSMUST00000113126	-	86	113	14	41	50	180	3x3x2x10x7x3	
G:        113    GCTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATATTTGAAATT    86        
                              |||X||X|X|||||||||X||||||X||
T:               -------------ATCaCTgGtCACGTGTGAcTGTCGAaTA---------
R:         14   T233020103001333231230221131111222112322330..32222.    41        
--
>1119_3489_4672_F3	ENSMUST00000113126	-	2599	2615	26	42	50	170	17	
G:       2615    GAAATTCTAAACAATCAGCCCAGGATGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                                          |||||||||||||||||
T:               -------------------------TGGTGTGGTGTCAGGGT--------
R:         26   T020302010303132323120212131011110111212001..22101.    42        
--
>1120_1185_486_F3	ENSMUST00000113126	+	120	137	20	37	50	160	14x4	
G:        120    CGTGACCAGTGATGACACAGGAATGTGTGAGATGGTTCTCATTGATCATG    137       
                                    ||||||||||||||X|||
T:               -------------------GGAATGTGTGAGATgGTT-------------
R:         20   T10320103032312231233020311111222330103.202..30233.    37        
--
>1120_1257_74_F3	ENSMUST00000113126	-	2075	2099	9	33	50	170	1x8x1x2x13	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                         |X|||||||XX|X||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTG-----------------
R:          9   T00133031111222232031110111232000120313.230..13300.    33        
--
>1120_3252_3006_F3	ENSMUST00000113126	+	2594	2625	7	38	50	180	5x7x1x1x2x11x2x3	
G:       2594    AGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCAGATGC    2625      
                       |||||X||||||XXX|X||||||||||X|X||
T:               ------CCAGCaCCCTGAcacCaCACCACACCTcTgTC------------
R:          7   T01002010123310021223203111011110212212.302..21122.    38        
--
>1121_1250_1224_F3	ENSMUST00000113126	-	2604	2627	13	36	50	180	2x1x7x14	
G:       2627    AAATTCTAAACATAGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                             ||XX||||||X|||||||||||||
T:               ------------TAgaCAGAGGtGTGGTGTGGTGTC--------------
R:         13   T333020103101333111222031110111101112010301...313..    36        
--
>1121_2506_4161_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x8x1x2x9x2x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X|||||||XX|X||||||||X|X|||||
T:               --------CtGAGAGCTccAaCCACAGCTtTtGTAAT-------------
R:          9   T001330311112222320311101112321031130313103...120..    37        
--
>1121_3044_3103_F3	ENSMUST00000113126	-	2600	2620	20	40	50	170	11x6x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                                    |||||||||||X|||||X|||
T:               -------------------AGGTGTGGTGTgGTGTCaGGG----------
R:         20   T133320323031000233232011110111201112320002...311..    40        
--
>1121_3987_400_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T001330311112222320311101112323001130102202...122..    36        
--
>1122_1001_1978_F3	ENSMUST00000113126	-	2596	2625	14	43	50	200	2x3x3x8x8x6	
G:       2625    AATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTAAAAATC    2596      
                              ||X||X||X|||||||X|||||||X|||||
T:               -------------GAcAGaGGtGTGGTGTgGTGTCAGgGTGCT-------
R:         14   T2333210303131023123203111011120111212201132.2032..    43        
--
>1122_3898_4504_F3	ENSMUST00000113126	+	2064	2091	13	40	50	166	3x12x4x3C1x4	
G:       2064    TCCCATATTGAACAGGCAGATTACAAAAGCTGTGGTTGGAGCTCTCAGAA    2091      
                             |||X|||||||||||X|||X|| |X|||
T:               ------------CAGgCAGATTACAAAaGCTgTGCTtGGA----------
R:         13   T2030201020310122312230311003232011322102113.2320..    40        
--
>1123_534_1453_F3	ENSMUST00000113126	-	2595	2625	15	45	50	190	x5x3x1x17x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                               X||||X||XX||||||||||||||||X||||
T:               --------------gACAGaGGtgTGGTGTGGTGTCAGGGtGCTG-----
R:         15   T233020103203010211232030110111101112120031..223...    45        
--
>1123_2267_2545_F3	ENSMUST00000113126	-	2606	2625	15	34	50	160	5x3x12	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGCTGTTTGAAAAAAAAT    2606      
                               |||||X||X|||||||||||
T:               --------------GACAGaGGtGTGGTGTGGTG----------------
R:         15   T233320103202033211232031110111101102022332..333...    34        
--
>1123_2589_3115_F3	ENSMUST00000113126	-	2599	2623	17	41	50	170	3x3x14x2x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAAT    2599      
                                 |||X||X|||||||||||||X|X||
T:               ----------------CAGaGGtGTGGTGTGGTGTCaGgGT---------
R:         17   T103310101203333221232031110111101112022013..200...    41        
--
>1123_3425_2600_F3	ENSMUST00000113126	-	2068	2099	14	45	50	180	x5x4x3x9x2x9	
G:       2099    ATGGATTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCTGAGGAG    2068      
                              X||||X|||X||X||||||||X|X||||||||
T:               -------------cTGAGaGCTcCAaCCACAGCTtTtGTAATCTG-----
R:         14   T122222010303132122123200121011123210211303..322...    45        
--
>1124_898_3900_F3	ENSMUST00000113126	-	718	750	5	37	50	176	x4x6x10x1G1x2x8	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    718       
                     X|||X|||||X|||||||||X |X|X|||||||
T:               ----cAATaTGCAGgCAGTAGGCAcGGaCaTTGTCAT-------------
R:          5   T122101030313122312132031330113301121322332..2221..    37        
--
>1124_2025_1532_F3	ENSMUST00000113126	-	2591	2620	19	48	50	166	3x8x2x6x7A3	
G:       2620    AATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGGGTATC    2591      
                                   |||X|||||||X|X|||||X|||||| |||
T:               ------------------AGGtGTGGTGTgGtGTCAGgGTGCTGAGTA--
R:         19   T130201030313102312320311101112021121220113..3213..    48        
--
>1124_2172_2951_F3	ENSMUST00000113126	-	2590	2616	20	46	50	170	x15x2x1x9	
G:       2616    TCTAAACAATCAGCCCAGGGTGGTGTGGTGTCAGGGTGCTGGGTACCCCT    2590      
                                    X||||||||||||||X|XX||||||||
T:               -------------------gTGGTGTGGTGTCAGgGtgCTGGGTAC----
R:         20   T023302010303133123121101111011121210023210..2110..    46        
--
>1124_2269_2787_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T233030103012010131232031110111101112122233..3211..    38        
--
>1124_2703_575_F3	ENSMUST00000113126	+	2604	2622	22	40	50	170	1x18	
G:       2604    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                      |X|||||||||||||||||
T:               ---------------------GaCACCACACCACACCTCT----------
R:         22   T233020103003003101232031110111101111022232..3210..    40        
--
>1124_3082_3581_F3	ENSMUST00000113126	+	1432	1452	15	35	50	170	5x7x9	
G:       1432    TCTAAGCAGCCATGACTACAAGCACCTGTACTTCGAGTCCGACGCAGCCA    1452      
                               |||||X||||||X||||||||
T:               --------------ACTACaAGCACCtGTACTTCG---------------
R:         15   T102110102033030123130231101113120233233200..2232..    35        
--
>1125_3710_1241_F3	ENSMUST00000113126	-	2608	2638	2	32	50	176	3x1A1x3x4x13x5	
G:       2638    AGGCATCTGGTGTAGACAGAGGTGTGGTGTGGCACTGTTTGAAAAAAAAT    2608      
                  |||X |X||X|||X||||||||||||X||||
T:               -GGCaACtGGtGTAgACAGAGGTGTGGtGTGG------------------
R:          2   T1003001010311332112220111100111030221332210.00003.    32        
--
>1126_2635_3327_F3	ENSMUST00000113126	-	709	750	5	46	50	198	x4x6x10x1A4x7G1G3x3	
G:        750    CCTTCAATATGCAGGCAGTAGGCACTGACATTGTCATTGAGCTTCGAGGT    709       
                     X|||X|||||X|||||||||X ||||X|||||| | |||X||
T:               ----cAATaTGCAGgCAGTAGGCAcAGACAtTGTCATGGGGCTtCG----
R:          5   T31200103031312231213203131221100112131000322232203    46        
--
>1126_2978_775_F3	ENSMUST00000113126	-	2601	2623	18	40	50	170	3x3x8x9	
G:       2623    GAAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAA    2601      
                                  |||X||X|||||||X||||||||
T:               -----------------CAGaGGtGTGGTGTgGTGTCAGG----------
R:         18   T31330201030313112312320311101112011121203232313133    40        
--
>1126_4287_3639_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x8x1x2x9x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X|||||||XX|X||||||||X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTTGTAA--------------
R:          9   T02333031111222232031110111232100113011130221232202    36        
--
>1127_1469_1826_F3	ENSMUST00000113126	+	2994	3013	27	46	50	180	20	
G:       2994    TCTTGTCACATATTCAATATTAAAATACTAAAATAAAAGTCATAAATACC    3013      
                                           ||||||||||||||||||||
T:               --------------------------ACTAAAATAAAAGTCATAAA----
R:         27   T001330311112322320311101112123000330002121..3022..    46        
--
>1127_3273_4044_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T001330311112022320311101112320001130110202..3322..    36        
--
>1128_1137_3268_F3	ENSMUST00000113126	-	2598	2625	15	42	50	200	5x16x1x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                               |||||X|||||||||||||||XX|X|||
T:               --------------GACAGaGGTGTGGTGTGGTGTcaGgGTG--------
R:         15   T333020103011013211232011110111101111022011..22033.    42        
--
>1128_1137_3268_F3	ENSMUST00000113126	+	2592	2624	10	42	50	176	2x3T3x1x2x1x17x3	
G:       2592    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2624      
                          ||X|| |||XX|XX||||||||||||||||X||
T:               ---------ACcCATCACccTgaCACCACACCACACCTCtGT--------
R:         10   T333020103011013211232011110111101111022011..22033.    42        
--
>1128_2061_1300_F3	ENSMUST00000113126	-	2600	2626	13	39	50	170	3x3x3x8x2x8	
G:       2626    AATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAATC    2600      
                             |||X||X||X|||||||X|X|||||||
T:               ------------AGAcAGaGGtGTGGTGTgGtGTCAGGG-----------
R:         13   T323121030313122312320311101112021121200330..31222.    39        
--
>1128_2375_3867_F3	ENSMUST00000113126	+	457	474	10	27	50	160	3x15	
G:        457    CAAGTTCAGGCAAGCAGTCCATATTGTCTGTACGCCTGGAGCAGTGCCCT    474       
                          |||X||||||||||||||
T:               ---------GCAaGCAGTCCATATTGT-----------------------
R:         10   T302010303131323121201333011113010233323112..23012.    27        
--
>1128_3357_585_F3	ENSMUST00000113126	-	2595	2620	20	45	50	160	11x6x2x2x5	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGCTGAAAAT    2595      
                                    |||||||||||X|||||X|X|X||||
T:               -------------------AGGTGTGGTGTgGTGTCaGgGtGCTG-----
R:         20   T301220103032311213232011110111301112323031..01221.    45        
--
>1128_3370_1073_F3	ENSMUST00000113126	+	2605	2622	23	40	50	160	12x6	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2622      
                                       ||||||||||||X|||||
T:               ----------------------ACACCACACCACaCCTCT----------
R:         23   T233020103001333201232031110111101131022231..00013.    40        
--
>1128_3460_3445_F3	ENSMUST00000113126	-	2601	2622	18	39	50	180	2x3x17	
G:       2622    AAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCAGGTGAAAAAAAAT    2601      
                                  ||X||X||||||||||||||||
T:               -----------------AGaGGtGTGGTGTGGTGTCAGG-----------
R:         18   T233320103021003323232031110111101112120223..33230.    39        
--
>1128_3848_3523_F3	ENSMUST00000113126	+	2589	2623	7	41	50	176	2x1x5x1x3x1x2T13x6	
G:       2589    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2623      
                       ||XX||||XX||XX| |||||||||||||X|||||
T:               ------GGtaCCCAgcACccTTACACCACACCACAcCTCTG---------
R:          7   T233020103210010211232031110111101112022212..03122.    41        
--
>1129_262_2048_F3	ENSMUST00000113126	-	2598	2620	20	42	50	170	3x12x4x4	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                                    |||X|||||||||||X|||X|||
T:               -------------------AGGtGTGGTGTGGTGtCAGgGTG--------
R:         20   T2330201032100300211320311101111011021230111.1321..    42        
--
>1129_972_3747_F3	ENSMUST00000113126	+	171	200	12	41	50	166	4x2x1A4x3x4x11	
G:        171    TAGAGAAGACTCATCCTCCGTCAGTGCCTGGAGACAGTGGGTCAGAAGTT    200       
                            ||||X|X ||||X||X|||X||||||||||
T:               -----------CATCcTcAGTCAgTGcCTGgAGACAGTGGG---------
R:         12   T3103020103031321231212131110211222112110032.2220..    41        
--
>1129_3612_3308_F3	ENSMUST00000113126	-	2072	2098	10	36	50	170	3x5x1x2x13x3	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                          |||X||||XX|X||||||||||||X||
T:               ---------TGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:         10   T0013333111121223203111011123200010300311022.2102..    36        
--
>1130_792_2900_F3	ENSMUST00000113126	+	1100	1126	21	47	50	166	9x8x3C6	
G:       1100    AACGCCTGGGAGTTCTGCCTGGTTCGCGAGAACAGTTCAAGGGCAGACGG    1126      
                                     |||||||||X|||||||X|| ||||||
T:               --------------------GGTTCGCGAgAACAGTTcAACGGCAGA---
R:         21   T22120130313012312133301023332020112100.313..32232.    47        
--
>1130_1522_2475_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	3x16	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    |||X|||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCAG------------
R:         20   T23302010300101322323203111011110111212.130..00223.    38        
--
>1130_1924_233_F3	ENSMUST00000113126	-	765	786	13	34	50	166	16C2x3	
G:        786    GTGCATGCGTGGGCGGAAAATCCGTGTCGACCTCGCGTGCGTAGCCTTCT    765       
                             |||||||||||||||| ||X||
T:               ------------GCGGAAAATCCGTGTCCACcTC----------------
R:         13   T30330201030313302000320311120111222021.231..21333.    34        
--
>1130_2167_1479_F3	ENSMUST00000113126	-	2603	2626	14	37	50	180	6x2x1x15	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                              ||||||X|XX||||||||||||||
T:               -------------AGACAGaGgtGTGGTGTGGTGTCA-------------
R:         14   T23302010323101221121213111011110111211.223..31033.    37        
--
>1130_3102_2159_F3	ENSMUST00000113126	-	2603	2622	19	38	50	160	2x11x7	
G:       2622    GAAATTCTAAACAATCAGAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAA    2603      
                                   ||X||||||||||X||||||
T:               ------------------AGaGGTGTGGTGTgGTGTCA------------
R:         19   T02330201030313312332320111101112011121.231..20221.    38        
--
>1130_3199_1161_F3	ENSMUST00000113126	-	2600	2625	15	40	50	170	5x3x12x2x4	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGGAAAAAAAAT    2600      
                               |||||X||X|||||||||||X|X|||
T:               --------------GACAGaGGtGTGGTGTGGTGtCaGGG----------
R:         15   T23302010323103021123203111011110113202.103..33202.    40        
--
>1130_3445_1375_F3	ENSMUST00000113126	-	2605	2631	9	35	50	162	4C1T4x3x13	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTTGTTTGAAAAAAAAT    2605      
                         |||| | ||||X||X||||||||||||
T:               --------GGTGCATACAGaGGtGTGGTGTGGTGT---------------
R:          9   T13302010301131331123203111011110111302.012..13323.    35        
--
>1131_694_1685_F3	ENSMUST00000113126	-	2074	2099	9	34	50	180	1x8x1x2x14	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTCCATGAAGGAGATCTT    2074      
                         |X|||||||XX|X|||||||||||||
T:               --------CtGAGAGCTccAaCCACAGCTTTTGT----------------
R:          9   T001330311112222320311101112320001120211000..31223.    34        
--
>1131_1358_2422_F3	ENSMUST00000113126	-	2593	2626	14	47	50	186	x6x3x14x3x2C5	
G:       2626    AAATTCTAAACAAAGACAGAGGTGTGGTGTGGTGTCAGGGTGCTGGGAAT    2593      
                              X|||||X||X|||||||||||||X||X| |||||
T:               -------------aGACAGaGGtGTGGTGTGGTGTCaGGgTCCTGGG---
R:         14   T233020103030002211232031110111101112020212..30020.    47        
--
>1131_2049_2409_F3	ENSMUST00000113126	-	2070	2099	9	38	50	180	1x8x1x2x9x2x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X|||||||XX|X||||||||X|X||||||
T:               --------CtGAGAGCTccAaCCACAGCTtTtGTAATC------------
R:          9   T001330311112222320311101112323021130321102..32223.    38        
--
>1131_2256_3913_F3	ENSMUST00000113126	+	2256	2272	1	17	50	150	14x3	
G:       2256    CGTGCGTAGCCTTCTAAGGCCTTCTCAACATGTCAGCGCCTGTGATCTGA    2272      
                 ||||||||||||||X||
T:               CGTGCGTAGCCTTCtAA---------------------------------
R:          1   T231133132302020303101133103303113011103230..22223.    17        
--
>1131_2544_1593_F3	ENSMUST00000113126	-	2602	2631	9	38	50	172	3x1x1G5x2A16	
G:       2631    AAATTCTAGGTGTAGACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                         |||XX |||||X| ||||||||||||||||
T:               --------GGTgtGGACAGaGATGTGGTGTGGTGTCAG------------
R:          9   T133020103013010211232231110111101112122032..30023.    38        
--
>1131_3051_1290_F3	ENSMUST00000113126	-	2599	2629	12	42	50	170	2x2x2x14x4x1x3x3	
G:       2629    GAAATTCTAAATGTAGACAGAGGTGTGGTGTGGTGTCAGGGTAAAAAAAA    2599      
                            ||X|X|X|||||||||||||X|||XX||X||
T:               -----------TGtAgAcAGAGGTGTGGTGTgGTGtcAGgGT--------
R:         12   T312302010303133123122201111011120113312301..30232.    42        
--
>1131_3266_1152_F3	ENSMUST00000113126	-	2194	2213	20	39	50	160	2x5x13	
G:       2213    CACTGGATTCCAATGAGCCGGGCACATGCTAGGTCCTCAGTACTTTGGCC    2194      
                                    ||X||||X||||||||||||
T:               -------------------GGgCACAtGCTAGGTCCTCA-----------
R:         20   T020231310112012302320331112132320120221211..23022.    39        
--
>1132_2718_1336_F3	ENSMUST00000113126	-	2602	2623	17	38	50	166	3C2x16	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 ||| ||X|||||||||||||||
T:               ----------------CAGCGGtGTGGTGTGGTGTCAG------------
R:         17   T22302010303131320123303111011110111212.0132.2311..    38        
--
>1132_4135_21_F3	ENSMUST00000113126	-	2603	2624	16	37	50	180	4x3x15	
G:       2624    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                ||||X||X||||||||||||||
T:               ---------------ACAGaGGtGTGGTGTGGTGTCA-------------
R:         16   T13102010303001131121203111011110111210.0301.2303..    37        
--
>1133_1524_393_F3	ENSMUST00000113126	-	2604	2623	17	36	50	160	3x3x14	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                                 |||X||X|||||||||||||
T:               ----------------CAGaGGtGTGGTGTGGTGTC--------------
R:         17   T23311110223133323123203111011110111203.302..22333.    36        
--
>1133_3709_2390_F3	ENSMUST00000113126	-	2598	2625	15	42	50	170	4x1x3x14x1x5	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCAGGGTGAAAAAAAT    2598      
                               ||||XX||X|||||||||||||XX||||
T:               --------------GACAgaGGtGTGGTGTGGTGTCagGGTG--------
R:         15   T23102010300001021113203111011110111200.211..12222.    42        
--
>1133_3799_1628_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x13x3	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X||||||||||||X||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAA--------------
R:          9   T00133031111232232031110111232000103001.002..32232.    36        
--
>1133_3974_1319_F3	ENSMUST00000113126	-	719	754	1	36	50	180	x4x4x5x1x11x2x3x3x3	
G:        754    TCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    719       
                 X|||X|||X||||XX||||||||||X|X||X||X||
T:               tCAGcAATaTGCAggCAGTAGGCACtGaCAtTGtCA--------------
R:          1   T12120103031313231213203111111110122112.300..03233.    36        
--
>1133_4048_1907_F3	ENSMUST00000113126	-	2072	2099	9	36	50	180	1x3x5x1x2x16	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||||||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGTAA--------------
R:          9   T00133031111202232031110111232000113010.113..31222.    36        
--
>1133_4203_1908_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x13x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTGtAAT-------------
R:          9   T00133031111232232031110111232000133033.302..23202.    37        
--
>1134_764_688_F3	ENSMUST00000113126	-	2603	2620	20	37	50	160	3x15	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCATTTGAAAAAAAAT    2603      
                                    |||X||||||||||||||
T:               -------------------AGGtGTGGTGTGGTGTCA-------------
R:         20   T233010101000013031332031110111101112133012...2131.    37        
--
>1134_1049_3407_F3	ENSMUST00000113126	-	2070	2099	9	38	50	160	1x3x5x1x2x9x2x7	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATCGAAGGAGATCTT    2070      
                         |X||X||||XX|X||||||||X|X||||||
T:               --------CtGAgAGCTccAaCCACAGCTtTtGTAATC------------
R:          9   T001330311112022320311101112323031130321303...1110.    38        
--
>1134_2783_1040_F3	ENSMUST00000113126	-	2075	2098	10	33	50	180	8x1x2x13	
G:       2098    TTCTCCCTTTGAGAGCTCCAACCACAGCTTTTGACCATGAAGGAGATCTT    2075      
                          ||||||||XX|X||||||||||||
T:               ---------TGAGAGCTccAaCCACAGCTTTTG-----------------
R:         10   T001333311112222320311101112320001233031202...3223.    33        
--
>1134_3603_1185_F3	ENSMUST00000113126	-	2602	2620	21	39	50	170	11x8	
G:       2620    GAAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAA    2602      
                                     |||||||||||X|||||||
T:               --------------------AGGTGTGGTGTgGTGTCAG-----------
R:         21   T021332010303131123123201111011120111212323...1202.    39        
--
>1135_853_434_F3	ENSMUST00000113126	+	2591	2619	9	37	50	170	3x2x9x2x5x5x3	
G:       2591    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2619      
                         |||X|X||||||||X|X||||X||||X||
T:               --------TACcCaGCACCCTGaCaCCACaCCACaCC-------------
R:          9   T23102011231300231100213101011210113103302120302..0    37        
--
>1135_1460_1944_F3	ENSMUST00000113126	-	2602	2623	17	38	50	180	6x13x3	
G:       2623    AAATTCTAAACAATCACAGAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                 ||||||X||||||||||||X||
T:               ----------------CAGAGGtGTGGTGTGGTGTcAG------------
R:         17   T23302010121231320122203111011110111312233212023..2    38        
--
>1135_1934_1675_F3	ENSMUST00000113126	+	2605	2632	23	50	50	186	15x3A4x5	
G:       2605    AGGCAAGGTACCCAGCACCCTGACACCACACCACACCTCTGTCTACACCA    2632      
                                       |||||||||||||||X|| ||||X||||
T:               ----------------------ACACCACACCACACCtCTATCTAcACCA
R:         23   T23102310321321312103203111011110111103223322301..3    50        
--
>1135_2924_67_F3	ENSMUST00000113126	-	2071	2099	9	37	50	170	1x3x5x1x2x11x6	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAATTGAAGGAGATCTT    2071      
                         |X||X||||XX|X||||||||||X|||||
T:               --------CtGAgAGCTccAaCCACAGCTTTtGTAAT-------------
R:          9   T00133031111232232031110111232003113030300212330..3    37        
--
>1136_642_3282_F3	ENSMUST00000113126	+	1149	1169	28	48	50	170	15x6	
G:       1149    GCAGACGGAGTTTTCGAGGAGGATTCACAAATTGACATCGCTACAGTACA    1169      
                                            |||||||||||||||X|||||
T:               ---------------------------CAAATTGACATCGCTaCAGTA--
R:         28   T120103031311231232031110111210030121132332..2213..    48        
--
>1136_1364_1181_F3	ENSMUST00000113126	-	2590	2612	19	41	50	170	13x1x6x3	
G:       2612    ACAATCAGCCCAGGAGTTTGTGGTGTCAGGGTGCTGGGTACCCCTCAAAG    2590      
                                   |||||||||||||XX|||||X||
T:               ------------------TGTGGTGTCAGGGtgCTGGGtAC---------
R:         19   T001330311112222320311101112120003321003311..2220..    41        
--
>1136_2323_3607_F3	ENSMUST00000113126	-	2602	2620	20	38	50	170	10x9	
G:       2620    AAATTCTAAACAATCAGCCAGGTGTGGTGTGGTGTCAGTTGAAAAAAAAT    2602      
                                    ||||||||||X||||||||
T:               -------------------AGGTGTGGTGtGGTGTCAG------------
R:         20   T010020133112113332132011110113101112122301..2300..    38        
--
>1136_2482_2427_F3	ENSMUST00000113126	-	86	112	14	40	50	170	5x2x1x7x9x3	
G:        112    CTCTGTATTTGAATCACTGGTCACGTGTGACTGTCGAATATTTGAAATTG    86        
                              |||||X|XX||||||X||||||||X||
T:               -------------TCACTgGtcACGTGTgACTGTCGAaTA----------
R:         14   T112201030313122112302311311102121123233311..1122..    40        
--
>1137_297_2413_F3	ENSMUST00000113126	-	2072	2099	9	36	50	160	1x3x5x1x2x12x4	
G:       2099    TTCTCCCTCTGAGAGCTCCAACCACAGCTTTTGTAAATGAAGGAGATCTT    2072      
                         |X||X||||XX|X|||||||||||X|||
T:               --------CtGAgAGCTccAaCCACAGCTTTTgTAA--------------
R:          9   T00133031111232232031110111232000313001.100...1113.    36        
--
>1137_2203_317_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	1x4x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               |X|||X||X|||||||||||||
T:               --------------GaCAGaGGtGTGGTGTGGTGTC--------------
R:         15   T33102010321303331123203111011110111230.301...1003.    36        
--
>1137_3995_3850_F3	ENSMUST00000113126	-	2604	2625	15	36	50	160	x5x3x14	
G:       2625    AAATTCTAAACAATGACAGAGGTGTGGTGTGGTGTCGTTTGAAAAAAAAT    2604      
                               X||||X||X|||||||||||||
T:               --------------gACAGaGGtGTGGTGTGGTGTC--------------
R:         15   T33202010303232021120203111011110111233.231...3332.    36        
--
>1138_2630_2879_F3	ENSMUST00000113126	-	720	753	2	35	50	160	1x2x4x6x10x1x1x3x2x4	
G:        753    CCAGCAATATGCAGGCAGTAGGCACTGACATTGTCATCTGAGAGACAGGT    720       
                  |X|X|||X|||||X|||||||||XXX||X|X|||
T:               -CaGcAATaTGCAGgCAGTAGGCActgACaTtGTC---------------
R:          2   T130201030313122312132031332212321123213120...30...    35        
--
>1139_3256_3853_F3	ENSMUST00000113126	+	782	804	1	23	50	176	3x7T12	
G:        782    TCCGCCACTGGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAGTACTT    804       
                 |||X|||||| ||||||||||||
T:               TCCgCCACTGTATTCCAATGAGC---------------------------
R:          1   T020130112113302010312231033123203111031121..012...    23        
--
>1140_1356_1054_F3	ENSMUST00000113126	-	730	750	5	25	50	170	4x6x11	
G:        750    CCTTCAATATGCAGGCAGTAGGCACAGCGCCTGTGATCTGAGAGACAGGT    730       
                     ||||X|||||X||||||||||
T:               ----CAATaTGCAGgCAGTAGGCAC-------------------------
R:          5   T23120103031312231213203113211200132201000302322...    25        
--
>1140_3115_1824_F3	ENSMUST00000113126	-	2608	2632	8	32	50	170	3x4x2x6x10	
G:       2632    AAATTCTTGGTGTAGACAGAGGTGTGGTGTGGCACTGTTTGAAAAAAAAT    2608      
                        |||X|||X|X|||||X|||||||||
T:               -------TGGtGTAgAcAGAGGtGTGGTGTGG------------------
R:          8   T23101010103113123122202111011110301130333323231...    32        
