echo "0hrep2"
time /data/results/tools/solid/saet/saet ../0hrep2/ugc_604_4_F3.csfasta ../0hrep2/ugc_604_4_F3.QV.qual    1700000 -fixdir 0hrep2 -qvupdate
echo "0hrep3"
time /data/results/tools/solid/saet/saet ../0hrep3/ugc_604_7_F3.csfasta ../0hrep3/ugc_604_7_F3.QV.qual    1700000 -fixdir 0hrep3 -qvupdate
echo "2hrep1"
time /data/results/tools/solid/saet/saet ../2hrep1/ugc_604_2_F3.csfasta ../2hrep1/ugc_604_2_F3.QV.qual    1700000 -fixdir 2hrep1 -qvupdate
echo "2hrep2"
time /data/results/tools/solid/saet/saet ../2hrep2/ugc_604_5_F3.csfasta ../2hrep2/ugc_604_5_F3.QV.qual    1700000 -fixdir 2hrep2 -qvupdate
echo "2hrep3"
time /data/results/tools/solid/saet/saet ../2hrep3/ugc_604_8_F3.csfasta ../2hrep3/ugc_604_8_F3.QV.qual    1700000 -fixdir 2hrep3 -qvupdate
echo "6hrep1"
time /data/results/tools/solid/saet/saet ../6hrep1/ugc_604_3_F3.csfasta ../6hrep1/ugc_604_3_F3.QV.qual    1700000 -fixdir 6hrep1 -qvupdate
echo "6hrep2"
time /data/results/tools/solid/saet/saet ../6hrep2/ugc_604_6_F3.csfasta ../6hrep2/ugc_604_6_F3.QV.qual    1700000 -fixdir 6hrep2 -qvupdate
echo "6hrep3"
time /data/results/tools/solid/saet/saet ../6hrep3/ugc_604_9_F3.csfasta ../6hrep3/ugc_604_9_F3.QV.qual    1700000 -fixdir 6hrep3 -qvupdate