chr11	100715818	100715837	G1002.1	3'utr,Rab5c,G1002.1,TCACTTTTTTAATATATATG,7,100715824,0.569708235024523,3,5,72,HAVANA	-
chr11	100715845	100715868	G1003.1	3'utr,Rab5c,G1003.1,TACAAATACTAATTCAATTTTAAG,26,100715845,0.7298226093092148,6,28,198,HAVANA	-
chr11	101645845	101645867	G1005.1	snRNA,Gm23971,G1005.1,ATACGTCCTCTATCCGAGGACAA,12,101645845,0.6454551860802399,4,14,46,ENSEMBL	-
chr11	102163501	102163532	G1006.1	3'utr,Lsm12,G1006.1,TTTTATTTTTCTTAACTTTAAATATATATATG,17,102163518,0.6462854713744386,11,17,243,HAVANA	-
chr11	102380632	102380651	G1007.1	NoAnnotation,,G1007.1,TTCCTTGGAACAGGATGTTA,28,102380638,0.8577115493647918,2,55,141,	-
chr11	109011645	109011840	G1017.1	repeat,L1M1,G1017.1,AGGGCGCCCTGGAATGGGTTCGCCCTGAGAGAGGGGCACGTGCCTTGGAAAGCGTCATGGTTCCGGCGGCATCCGGTGAGCTCTCGCTGGCCCTTGAAAATCCGGGGGAGAGCTTGTAAATCTCCGGGCCGTACCCATATCCGCAGCAGGTCTCCAAGGTGAACAGCCTCTGGCATGTTGGAACAATGTAGGTAAA,8384,109011808,0.998084544444262,26,228,33599,RepeatMasker	-
chr11	109011949	109012049	G1018.1	repeat,L1M1,G1018.1,AACATGGGTCAGTCAGTCCTGAGAGATGGGTGAGTGCCGTTCCGAAGGGATGGGCGATGGCCTCCGTTGCCCTCGGCCGATTGAAGGGGAGTCGGGTTCAG,564,109012001,0.997373491795383,9,558,2199,RepeatMasker	-
chr1	121816288	121816310	G102.1	NoAnnotation,,G102.1,ATGTCTGATCAGGCAGTGCTGTG,17,121816310,0.9239096033921741,2,18,86,	+
chr11	116022887	116022920	G1022.1	3'utr,H3f3b,G1022.1,CATTTATAATAGCTATTTTATATATTGTAGTGTT,10,116022904,0.6793318069955673,6,9,114,HAVANA	-
chr1	121850843	121850863	G103.1	NoAnnotation,,G103.1,ACATTGGCTGCTGAGTTCAAT,23,121850846,0.8002408859486112,2,24,136,	+
chr12	8750236	8750257	G1044.1	3'utr,Pum2,G1044.1,CATAAATATTATTAATATTTTA,8,8750257,0.6352269107267255,4,7,80,HAVANA	+
chr12	11317911	11317932	G1049.1	3'utr,Smc6,G1049.1,AGGGGAATTGTGAGGGGATAAC,1898,11317932,0.8811957316558398,2,16,7576,ENSEMBL	+
chr12	12353427	12353453	G1052.1	intron,Fam49a,G1052.1,TGCGGGTGTAGCTCAGTTGGTAGAGGG,190,12353427,0.7677824848560568,3,22,1120,ENSEMBL	+
chr12	15811551	15811570	G1054.1	NoAnnotation,,G1054.1,ACCTCTGTCGCCCTTCGCTT,7,15811559,0.6863765828307616,2,14,35,	+
chr12	32752152	32752176	G1063.1	repeat,AluY,G1063.1,AGTTACTGTTGAAGGATATGTATTA,79,32752161,0.7749269953012273,2,80,581,RepeatMasker	+
chr12	52568117	52568150	G1080.1	NoAnnotation,,G1080.1,TCTTGTAATCTTAATCTAATATATTTTAGATATT,19,52568145,0.7097497718937339,9,20,212,	+
chr12	52569111	52569136	G1081.1	NoAnnotation,,G1081.1,TTCTATATTACTTATACCTATTGTCT,26,52569124,0.6707578244821284,8,25,285,	+
chr12	54135144	54135194	G1084.1	NoAnnotation,,G1084.1,AGGTGGAACACGAGCGTACGCGTTAGGACCTGAAAGATGGTGAACTATGAC,18,54135153,0.9978617916706246,2,18,45,	+
chr12	54226134	54226155	G1086.1	NoAnnotation,,G1086.1,AAGAGGTCATTGGTTTGATCCC,5,54226145,0.5677459111088795,2,10,25,	+
chr12	62752285	62752305	G1092.1	repeat,AluSq2,G1092.1,TATAATTATTCCATTATATAT,5,62752285,0.7561308350042737,2,3,52,RepeatMasker	+
chr12	69159371	69159392	G1099.1	misc_RNA,Metazoa_SRP,G1099.1,TTCTGGGCTGTAGTGCGCTATG,17,69159371,0.8197221109030542,3,11,115,ENSEMBL	+
chr12	69159505	69159543	G1099.2	misc_RNA,Metazoa_SRP,G1099.2,TCAAAACTCCCGTGCTGATCAGTAGTGGGATCGCGCCTG,18,69159528,0.6749308906316696,3,5,79,ENSEMBL	+
chr12	69159549	69159595	G1099.3	misc_RNA,Metazoa_SRP,G1099.3,AGCCACTGCACTCCAGCCTGGGCAACATAGCGAGACCCCGTCTCTTT,38,69159577,0.8010538972031229,4,12,155,ENSEMBL	+
chr12	69361206	69361227	G1100.1	NoAnnotation,,G1100.1,CCCAGGCTGGAGTGCAGTGGCT,5,69361206,0.6071501033545473,3,3,14,	+
chr12	78350878	78350921	G1111.1	intron,Gphn,G1111.1,ACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAA,361,78350910,0.8895668340087893,7,123,1700,ENSEMBL	+
chr12	78350930	78350962	G1112.1	intron,Gphn,G1112.1,GCAGGTGTCCTAAGGCGAGCTCAGGGAGGACAG,1333,78350933,0.6002085065218608,4,44,5159,ENSEMBL	+
chr12	78350979	78351063	G1112.2	intron,Gphn,G1112.2,AGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCCGACCTTTTG,381,78351038,0.8088302403138081,8,25,2925,ENSEMBL	+
chr12	78351066	78351118	G1112.3	intron,Gphn,G1112.3,TTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCG,429,78351107,0.68887181515648,8,14,2300,ENSEMBL	+
chr12	78351131	78351173	G1112.4	intron,Gphn,G1112.4,TAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTAT,338,78351155,0.5942076959926386,6,13,3033,ENSEMBL	+
chr12	85273418	85273438	G1116.1	NoAnnotation,,G1116.1,CATTTTTTTCTTCTCCTAATC,5,85273438,0.8169431317088017,2,2,58,	+
chr1	128201613	128201632	G112.1	intron,R3hdm1,G112.1,TTTTAACCTTTAATTTATTT,27,128201626,0.7216087031525107,2,25,326,ENSEMBL	+
chr12	99645060	99645080	G1124.1	NoAnnotation,,G1124.1,TACACGGACCAAGGAGTCTAA,128,99645065,0.8408493972533768,2,4,287,	+
chr12	99645156	99645180	G1126.1	NoAnnotation,,G1126.1,AGGTGGGATCCCGAGGCCTCTCCAG,548,99645156,0.7339723762014452,3,13,1910,	+
chr12	99645219	99645258	G1127.1	NoAnnotation,,G1127.1,CGCCGGGGAGGTGGAGCACGAGCGTATGCGTTAGGACCCG,122,99645240,0.9665846891197408,2,15,139,	+
chr12	99645269	99645322	G1128.1	NoAnnotation,,G1128.1,AACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGAAGCG,259,99645291,0.973112375642026,4,8,857,	+
chr12	99645464	99645496	G1129.1	NoAnnotation,,G1129.1,TAAAGCGAATGATTAGAGGTCTTGGGGCTGAAA,294,99645482,0.895886192829553,2,64,847,	+
chr12	99645563	99645597	G1130.1	NoAnnotation,,G1130.1,TAGAATGCGAGTGCCTAGTGGGCCACTTTTGGTAA,91,99645577,0.7770456223778313,2,4,708,	+
chr12	99645613	99645639	G1130.2	NoAnnotation,,G1130.2,CGGGATGAACCGAACGCCGGGTTAAGG,213,99645626,0.627153487876021,2,3,431,	+
chr12	106596472	106596493	G1140.1	repeat,THE1D,G1140.1,CAAAGGTTGGTTTGTGTATTCA,5,106596487,0.7139133583613181,2,8,37,RepeatMasker	+
chr12	108816012	108816032	G1144.1	3'utr,Yy1,G1144.1,CTTACAATTTTTTTAATTTTG,9,108816032,0.7029608550705139,5,8,109,HAVANA	+
chr12	108816033	108816055	G1145.1	3'utr,Yy1,G1145.1,TATTTTCCAAGTGTGCATATTGT,8,108816050,0.6761918966250693,4,8,73,HAVANA	+
chr12	109618305	109618326	G1147.1	miRNA,Mir370,G1147.1,GCCTGCTGGGGTGGAACCTGGT,90,109618316,0.6971256547372012,3,5,445,ENSEMBL	+
chr1	131573835	131573871	G115.1	NoAnnotation,,G115.1,ATCGAGGCCCAGCCCGTGGACGGTGTGAGGCTGGTAG,86,131573867,0.9661370857039396,3,16,180,	+
chr12	114216459	114216479	G1152.1	NoAnnotation,,G1152.1,CTCACTATATATTTAATATTT,14,114216472,0.5930230102507693,9,12,141,	+
chr12	114616671	114616695	G1153.1	repeat,HERV4_I-int,G1153.1,TGATGATGATGATGATGATGGAAAA,5,114616671,0.7376842320417086,2,2,28,RepeatMasker	+
chr12	115099701	115099725	G1154.1	NoAnnotation,,G1154.1,TCAACAATGGATAAAAGGTACCTCA,7,115099701,0.9882854309958605,2,8,20,	+
chr1	131573931	131573956	G116.1	NoAnnotation,,G116.1,TAAACTCCATCTAAGGCTAAATACCG,260,131573931,0.6583519552061653,6,14,1490,	+
chr12	5020286	5020307	G1160.1	NoAnnotation,,G1160.1,CAACTAATTATAATTTTTATTT,5,5020296,0.6612612344006628,2,2,58,	-
chr12	11317908	11317931	G1164.1	repeat,L1MCc,G1164.1,TTATCCCCTCACAATTCCCCTTCA,320,11317908,0.8914585535619877,3,96,1949,RepeatMasker	-
chr12	11326911	11326930	G1165.1	intron,Vsnl1,G1165.1,CTGGAGGTCTGAACTGACTA,6,11326917,0.8068982977375474,2,11,19,ENSEMBL	-
chr12	14735978	14736009	G1169.1	repeat,Tigger3,G1169.1,AAGTTGGAATCTGCTAAGGAGTGTGTAACAAC,10,14735999,0.7075472257806712,3,9,53,RepeatMasker	-
chr1	131574004	131574035	G117.1	NoAnnotation,,G117.1,AGTTCAAGAGGGCGTGAAACCGTTAAGAGGTT,1640,131574035,0.9312290146390159,7,48,7196,	+
chr1	131598284	131598304	G118.1	NoAnnotation,,G118.1,ACTTTCTCAGGGCCAGGTGGT,5,131598298,0.8710272158249219,2,10,20,	+
chr12	35156893	35156915	G1181.1	NoAnnotation,,G1181.1,CAGTTGCTGTATGGCTGTTGTCA,5,35156906,0.6438341996142377,2,9,36,	-
chr12	37231921	37231943	G1185.1	NoAnnotation,,G1185.1,AGCTAACCAGTACTAATTGCTCA,16,37231924,0.7249842860701871,2,13,77,	-
chr12	43561333	43561354	G1189.1	repeat,MIR,G1189.1,TATTTTATTTTTATTTATCACG,5,43561354,0.8168496545717008,3,8,62,RepeatMasker	-
chr1	131634919	131634940	G119.1	NoAnnotation,,G119.1,CATACATATATATTCGCAAGTT,9,131634919,0.7646553748998186,2,2,62,	+
chr12	46697919	46697951	G1194.1	3'utr,Nova1,G1194.1,CTATTATATTTACTCATTTTATCATTATAAATG,5,46697919,0.9599606616398595,2,6,63,ENSEMBL	-
chr12	50232793	50232814	G1196.1	NoAnnotation,,G1196.1,CTTCACATGTCATATAATGGTC,13,50232807,0.6558637356588217,2,26,78,	-
chr12	51609158	51609180	G1199.1	3'utr,Strn3,G1199.1,CCTATTATTTATTTTACTTTTTG,18,51609158,0.6995068805374317,6,31,230,ENSEMBL	-
chr12	51609578	51609607	G1200.1	3'utr,Strn3,G1200.1,AAAATTTAACTTAAAATATTTTAGCATTAG,8,51609586,0.7002331310506619,3,10,77,ENSEMBL	-
chr12	51743788	51743811	G1201.1	3'utr,Hectd1,G1201.1,TATATTATAAACATTTATTTAACT,8,51743800,0.6401754009682104,3,4,85,ENSEMBL	-
chr12	53046706	53046733	G1205.1	rRNA,n-R5s58,G1205.1,CTTGGGAATACCAGGTGCTGTAGGCTTA,8,53046733,0.7922506643282928,3,4,54,ENSEMBL	-
chr12	54401250	54401274	G1209.1	NoAnnotation,,G1209.1,ATTTAAGTAACTGTAGGAAAAGAAA,11,54401255,0.9151796161271967,2,20,28,	-
chr12	61698431	61698456	G1214.1	NoAnnotation,,G1214.1,TCTTCTTAATTTTATTTATTTATTTA,23,61698431,0.6146290342009489,9,21,374,	-
chr12	66979637	66979656	G1218.1	intron,Mdga2,G1218.1,CATCCTTTATTTTTAATATT,24,66979644,0.6153858035476014,4,21,263,HAVANA	-
chr12	68638632	68638654	G1219.1	NoAnnotation,,G1219.1,AAATTTAACTGTGATAAATTCAA,39,68638634,0.8391797256119067,2,37,275,	-
chr12	69159549	69159575	G1220.1	NoAnnotation,,G1220.1,TGTTGCCCAGGCTGGAGTGCAGTGGCT,18,69159571,0.7815507865451085,3,15,61,	-
chr12	69361181	69361205	G1221.1	misc_RNA,Metazoa_SRP,G1221.1,CAACATAGCGAGACCCCGTCTCTTT,15,69361181,0.7099250917186685,5,10,48,ENSEMBL	-
chr12	69361384	69361407	G1223.1	misc_RNA,Metazoa_SRP,G1223.1,AGTTCTGGGCTGTAGTGCGCTATG,22,69361407,0.8178680626603562,4,11,133,ENSEMBL	-
chr12	71267293	71267322	G1226.1	NoAnnotation,,G1226.1,GGGTGTTTAGCTCAGTTGGTAGAGCACCTG,14,71267293,0.8661138924376313,3,6,99,	-
chr12	71674958	71674979	G1228.1	NoAnnotation,,G1228.1,TCACTTATTTATTTATTTTTTG,6,71674958,0.8914332613326286,2,2,69,	-
chr1	133033962	133033987	G123.1	NoAnnotation,,G123.1,GCCCGGATAGCTCAGTCGGTAGAGCA,132,133033962,0.7836685320303989,2,8,515,	+
chr12	74084930	74084951	G1230.1	NoAnnotation,,G1230.1,TGTGTGTGATGGCCCATGGTAA,14,74084951,0.8936556748706374,3,3,60,	-
chr12	74423688	74423708	G1232.1	NoAnnotation,,G1232.1,TGTTCCAGTAAATAGCCCCAC,13,74423688,0.8527288889811684,2,2,63,	-
chr12	80108161	80108200	G1235.1	3'utr,Zfp36l1,G1235.1,CAAAAAACTGTTGGATTATTTATTTTAGAAATTCTCCCCT,6,80108161,0.982084405452334,6,8,58,ENSEMBL	-
chr12	80441371	80441418	G1236.1	NoAnnotation,,G1236.1,AATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCCT,89,80441371,0.9999680363616762,2,2,244,	-
chr12	80441438	80441478	G1236.2	NoAnnotation,,G1236.2,ATTCCCACTGTCCCTACCTACTATCCAGCGAAACCACAGCC,68,80441440,0.9998420933154529,2,3,424,	-
chr12	88359006	88359025	G1241.1	repeat,L1MEe,G1241.1,TATTCTCCATATTTTGGAGT,5,88359017,0.7128087488363988,2,5,45,RepeatMasker	-
chr12	89208133	89208153	G1243.1	NoAnnotation,,G1243.1,TGTATGCCCTTGTAGCTTGAG,88,89208149,0.8246584644468332,2,89,541,	-
chr12	97756867	97756891	G1250.1	NoAnnotation,,G1250.1,AGTTCGATCTTGGGTCATGCCACCA,16,97756867,0.9733662473934899,2,32,75,	-
chr12	99249979	99250000	G1252.1	intron,Foxn3,G1252.1,TGGTGTCCGAGTTGTAGTTTGT,20,99250000,0.8014152506004085,3,36,142,HAVANA	-
chr12	102692545	102692568	G1257.1	intron,Itpk1,G1257.1,TGATGTGTGCTGGATGTTGGGGAT,6,102692568,0.8056130056172092,2,11,37,HAVANA	-
chr12	102780973	102781000	G1258.1	repeat,MER33,G1258.1,AAATATATAGTATTTTTATTTAGGTACC,7,102780973,0.9088013676085436,5,8,81,RepeatMasker	-
chr12	102876787	102876812	G1259.1	intron,Btbd7,G1259.1,ACACCATATTTAATAAAATTTAGTAA,26,102876794,0.7411111807370416,4,28,197,ENSEMBL	-
chr12	104471255	104471281	G1261.1	3'utr,Gsc,G1261.1,CCCCCACCGTAGTATTTATAGTTAAGT,13,104471265,0.6407360253760002,3,15,82,HAVANA	-
chr1	136364930	136364966	G129.1	NoAnnotation,,G129.1,GGCGAAGCTACCATCTGTGGGATTATGACTGAACGCC,18262,136364964,0.676708829672986,8,334,144521,	+
chr13	20247514	20247537	G1295.1	intron,Elmo1,G1295.1,AGGTCCCTCTGCACAGGTGCTGCC,378,20247514,0.805830396601126,2,14,1869,HAVANA	+
chr13	21172362	21172390	G1298.1	NoAnnotation,,G1298.1,GTAATGGTTAGCACTCTGGACTCTGAATC,5,21172362,0.9876815058809703,2,2,21,	+
chr13	21919273	21919299	G1305.1	NoAnnotation,,G1305.1,CAGGTTCGAATCCTGCCGACTACGTCA,13,21919299,0.9752347247241444,2,13,49,	+
chr13	23463535	23463579	G1317.1	repeat,LTR2B,G1317.1,TCCCACATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCCAGGCG,28,23463578,0.868909437999715,3,4,192,RepeatMasker	+
chr13	26069176	26069195	G1329.1	NoAnnotation,,G1329.1,CTTAGCATTGTGATGGTCAG,10,26069186,0.6929637430462254,2,11,59,	+
chr13	28952255	28952275	G1332.1	NoAnnotation,,G1332.1,GGGTGTTTGGCTGGGGTGGCC,8,28952275,0.9911881253935542,2,12,36,	+
chr13	31809353	31809377	G1338.1	3'utr,Foxc1,G1338.1,CAACATAGTAATTTATTTTTAATTT,51,31809373,0.6403893888882802,9,60,573,HAVANA	+
chr13	35873551	35873577	G1341.1	3'utr,Cdyl,G1341.1,TAGGTTCACTTAGAATATATTTTATTT,16,35873560,0.8455586321831785,2,15,177,ENSEMBL	+
chr13	38227434	38227456	G1343.1	3'utr,Snrnp48,G1343.1,TTAAAGGGGAATTGTGAGCGGTA,16,38227434,0.8868769090032673,3,7,60,ENSEMBL	+
chr13	45411841	45411868	G1354.1	3'utr,Mylip,G1354.1,TCAGATATTAAAACTCTACTTTTTTATG,14,45411868,0.6648277236151166,6,7,152,ENSEMBL	+
chr13	51152382	51152408	G1363.1	3'utr,Spin1,G1363.1,AATTCATTTTTAATTTTAATTTTATTT,8,51152391,0.6230075981617336,8,10,111,ENSEMBL	+
chr13	63300760	63300780	G1379.1	miRNA,Mir27b,G1379.1,TTCACAGTGGCTAAGTTCTGC,36,63300761,0.7146234834958769,2,3,249,ENSEMBL	+
chr13	75161328	75161350	G1384.1	NoAnnotation,,G1384.1,AACTGAAGAGTGCAATCATGGGC,8,75161328,0.9927038123066662,2,16,16,	+
chr13	75648111	75648132	G1385.1	NoAnnotation,,G1385.1,CATTTTCATATTCTTTATTTAT,10,75648111,0.723450400037514,4,6,131,	+
chr13	83663661	83663681	G1390.1	3'utr,Mef2c,G1390.1,CTTTCTAATATATATAATATT,6,83663672,0.6582225751409458,5,6,59,ENSEMBL	+
chr13	88429856	88429880	G1397.1	NoAnnotation,,G1397.1,TAACAATGTAGGTAAGGTAAGTTTG,1411,88429880,0.9706513306716583,3,88,5782,	+
chr13	104910945	104910970	G1417.1	NoAnnotation,,G1417.1,GGTGGGGGTAGCTCAGTTGGTAGAGT,10,104910945,0.6767643036363569,3,4,57,	+
chr1	147887045	147887067	G142.1	NoAnnotation,,G142.1,TTATTTTTAAATCAATATTATCT,6,147887052,0.7269835411416148,2,7,63,	+
chr13	107121701	107121725	G1422.1	NoAnnotation,,G1422.1,AGGTGGGATCCCGAGGCCTCTCCAG,273,107121701,0.6691234195453026,3,23,1051,	+
chr13	107121906	107121928	G1425.1	NoAnnotation,,G1425.1,GCACGCAGTTTTATCCGGTAAAG,367,107121928,0.7904896600529243,2,3,2199,	+
chr1	148874134	148874153	G143.1	NoAnnotation,,G143.1,TATATTTAATTCTCTACTCT,8,148874145,0.688279630407476,2,2,86,	+
chr13	111717405	111717429	G1433.1	3'utr,Mier3,G1433.1,TAAATTCTTCATATCTTTTTAGACC,6,111717426,0.7334412621895611,3,6,65,HAVANA	+
chr13	111718351	111718372	G1434.1	3'utr,Mier3,G1434.1,ATATTAATATTCCTCTTAGATG,16,111718367,0.7649082922693234,3,19,141,HAVANA	+
chr13	119457262	119457281	G1447.1	3'utr,Paip1,G1447.1,CCAAAATAAACTTTATTCCC,5,119457280,0.697041097303661,2,4,26,HAVANA	+
chr13	6531965	6531986	G1454.1	NoAnnotation,,G1454.1,ATTTCTAAACTAATATTATTTC,55,6531973,0.6494010458341899,5,12,565,	-
chr13	9834331	9834353	G1458.1	NoAnnotation,,G1458.1,CTCCCTCGCTGCGATCTATTGAA,29,9834353,0.9686697677659377,2,2,146,	-
chr13	9834382	9834409	G1458.2	NoAnnotation,,G1458.2,CTAAACCATTCGTAGACGACCTGCTTCT,788,9834388,0.963315647377186,2,3,2599,	-
chr1	151363865	151363887	G146.1	3'utr,Ivns1abp,G146.1,CCTACCAATATTTAGTCTTTTAT,5,151363886,0.7281680922135129,2,5,50,ENSEMBL	+
chr13	9834466	9834495	G1460.1	miRNA,Gm24187,G1460.1,GTTCGTCTTGGGAAACGGGGTGCGGCCGGA,331,9834470,0.9880170267168491,2,655,672,ENSEMBL	-
chr13	16129364	16129385	G1465.1	NoAnnotation,,G1465.1,ATATTGCTTTATGTTAGTATCT,121,16129371,0.7497905125977226,2,122,1210,	-
chr13	17882324	17882345	G1467.1	3'utr,Rala,G1467.1,ACCATACTAATAAATATAATTT,5,17882345,0.7867107919466653,2,5,34,HAVANA	-
chr13	18215267	18215299	G1468.1	processed_transcript,Pou6f2,G1468.1,TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT,106,18215296,0.7057012277837729,3,4,1034,HAVANA	-
chr13	19288792	19288823	G1469.1	NoAnnotation,,G1469.1,TCATCATCATCATCATCATCATCACAGTAGTA,13,19288792,0.9348178575159276,2,6,103,	-
chr13	21160824	21160856	G1471.1	NoAnnotation,,G1471.1,TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT,44,21160824,0.6977980428552827,6,11,406,	-
chr13	21937151	21937173	G1475.1	NoAnnotation,,G1475.1,AGTCGTGGCCGAGTGGTTAAGGC,9,21937173,0.7047198876805858,2,3,40,	-
chr13	22015822	22015863	G1477.1	repeat,AluY,G1477.1,GTTTCCGTAGTGTAGTGGTTATCACATTCGCCTAACACGCGA,14,22015849,0.7624841061433765,4,9,123,RepeatMasker	-
chr13	23192132	23192153	G1479.1	NoAnnotation,,G1479.1,GATGTCGGCTCATTTCCTCCTG,8,23192140,0.6982358471686704,2,9,55,	-
chr13	23446163	23446214	G1481.1	NoAnnotation,,G1481.1,GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCG,42,23446163,0.9989999079792528,6,11,329,	-
chr13	28949420	28949445	G1488.1	3'utr,Sox4,G1488.1,ACTATTTAATCCTTTCTACTTGTCGC,22,28949421,0.7587969856324532,5,18,226,HAVANA	-
chr13	28949991	28950031	G1489.1	3'utr,Sox4,G1489.1,AAGGGCTAGAGTTTTAACTTTTAATTTTTTATATTTAAATG,77,28950010,0.6103717931260124,13,84,1204,HAVANA	-
chr13	31174014	31174037	G1491.1	NoAnnotation,,G1491.1,AAGTTATGGTTAAGTGGGAAAGGA,6,31174037,0.7625139438002358,2,6,30,	-
chr13	35885092	35885113	G1494.1	NoAnnotation,,G1494.1,ATTGGCTCTGAGGGTTGGGCAT,6,35885099,0.7527500803179,2,5,33,	-
chr13	38227434	38227453	G1495.1	NoAnnotation,,G1495.1,CGCTCACAATTCCCCTTTAA,44,38227437,0.6579879928446938,2,3,261,	-
chr13	40678840	40678860	G1497.1	NoAnnotation,,G1497.1,TGGCTGGATAACCTCTTTTCT,14,40678860,0.8122247281858002,2,15,111,	-
chr13	44869572	44869600	G1503.1	repeat,MIRb,G1503.1,ACCCCAGAAAAGGTGTTGGTTGATATAGA,2307,44869600,0.9651111092262247,7,38,16044,RepeatMasker	-
chr13	44869603	44869643	G1503.2	repeat,MIRb,G1503.2,AACCGAACGCCGGGTTAAGGCGCCCGATGTCGACGCTCATC,319,44869610,0.9951073493682643,3,74,586,RepeatMasker	-
chr13	44869686	44869711	G1503.3	NoAnnotation,,G1503.3,TGGAGCCGGGCGTGGAATGCGAGTGC,124,44869711,0.8494324786090927,4,9,370,	-
chr13	44869926	44869968	G1504.1	NoAnnotation,,G1504.1,AGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAA,158,44869949,0.772120960074828,4,58,677,	-
chr13	44869995	44870024	G1504.2	NoAnnotation,,G1504.2,GAGCGTACGCGTTAGGACCCGAAAGATGGT,112,44870024,0.9991862120451805,3,44,294,	-
chr13	46680510	46680531	G1509.1	3'utr,Nup153,G1509.1,CCTTTTTCATTATTTTATTATG,8,46680516,0.6878998642338625,4,7,104,HAVANA	-
chr13	46680545	46680565	G1510.1	3'utr,Nup153,G1510.1,CTATTTCTATATTTTCATTCT,5,46680553,0.5994480045298207,3,5,59,HAVANA	-
chr13	54189996	54190048	G1517.1	repeat,L1M5,G1517.1,ATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGCGTTGGATTGTT,66,54190022,0.8907987776006652,7,14,494,RepeatMasker	-
chr13	54190081	54190129	G1518.1	repeat,L1M4,G1518.1,GAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAG,120,54190123,0.9207186759318537,6,12,632,RepeatMasker	-
chr13	54190146	54190186	G1519.1	repeat,L1M4,G1519.1,AAGAGAGGGGCCCGTGCCTTGGAAAGTGTCGCGGTTCCGGC,206,54190161,0.82576120558118,3,209,827,RepeatMasker	-
chr13	54679459	54679481	G1520.1	3'utr,Rnf44,G1520.1,CAATCATTATTTTTTTTAATATT,6,54679465,0.7113209789083226,2,5,75,HAVANA	-
chr13	56670774	56670793	G1522.1	NoAnnotation,,G1522.1,TTCTCTTGGGGACACGTGCG,6,56670774,0.9573526723378507,2,6,30,	-
chr13	58127187	58127211	G1525.1	3'utr,Hnrnpa0,G1525.1,ACTCTATTTTTTTATTATTACTTGG,69,58127189,0.7475350712691382,14,77,901,ENSEMBL	-
chr13	78189082	78189102	G1536.1	3'utr,Nr2f1,G1536.1,ATTCTATACTAATAATTTTTG,14,78189086,0.6581603166635807,5,10,144,HAVANA	-
chr13	81799089	81799114	G1541.1	repeat,L1MCb,G1541.1,AATGATAATAATTCCCCTCTAGACAA,1126,81799107,0.7610006208713241,3,1131,5681,RepeatMasker	-
chr13	90854535	90854557	G1547.1	repeat,LTR38,G1547.1,TTGGGAACTGCATTTGTGACTGT,25,90854557,0.9259335861745246,2,11,180,RepeatMasker	-
chr13	97190593	97190633	G1549.1	intron,Hexb,G1549.1,GATATTCAAATGAGAACTTTGAAGGCCGAAGTGGAGAAGGG,1055,97190623,0.8711978690010078,7,47,4696,ENSEMBL	-
chr13	97241127	97241148	G1551.1	NoAnnotation,,G1551.1,GCCTCCGTCGCGCCGCTGGCTC,60,97241138,0.6443074523762311,2,3,205,	-
chr13	102313566	102313589	G1554.1	repeat,L1MEd,G1554.1,AGAAGGTTGTCATATGTGAGAGGA,112,102313585,0.7347371593753413,2,113,559,RepeatMasker	-
chr13	107725729	107725752	G1559.1	3'utr,Zswim6,G1559.1,AAAATATAACATTAACTAATTTAT,6,107725740,0.7244088791265239,3,4,46,ENSEMBL	-
chr13	112578175	112578228	G1566.1	intron,Il31ra,G1566.1,AAGACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGACATGAAAGGTA,284,112578175,0.9553644196433493,5,14,1027,ENSEMBL	-
chr13	112578274	112578305	G1566.2	intron,Il31ra,G1566.2,AGATTCCCACTGTCCCTACCTACTATCCAGCG,56,112578283,0.8634007663721525,4,4,295,ENSEMBL	-
chr13	112578644	112578691	G1567.1	intron,Il31ra,G1567.1,CAAAGTGAAGAAATTCAATGAAGCGTGGGTAAACGGCGGGAGTAACTA,78,112578678,0.9993907372701608,2,2,125,ENSEMBL	-
chr13	112578693	112578725	G1567.2	intron,Il31ra,G1567.2,ACGCGATGTGATTTCTGCCCAGTGCTCTGAATG,129,112578721,0.7071045732819816,3,3,855,ENSEMBL	-
chr14	11271246	11271267	G1574.1	NoAnnotation,,G1574.1,TCTTAATTTTATTCTCTCTATT,5,11271257,0.651558833826282,3,5,64,	+
chr14	13855996	13856016	G1577.1	NoAnnotation,,G1577.1,TTTGAAGCCAGTTTCCTTTGA,5,13856016,0.7809465030882428,2,6,31,	+
chr14	19119220	19119239	G1579.1	NoAnnotation,,G1579.1,ATCTAATAAACTTTATTTTT,7,19119231,0.7017264738339907,3,7,70,	+
chr14	19278162	19278238	G1580.1	NoAnnotation,,G1580.1,AGAAAAGGTGTTGGTTGATATAGACAGCAGGATGTTGGCCATGGAAGTAGGAATTCGCTAAGGAGTGTGTAACAACT,1908,19278191,0.9869708020547726,13,479,12828,	+
chr14	19279304	19279328	G1582.1	NoAnnotation,,G1582.1,CAGGTTCAGACATTTGGTGTATGTG,292,19279322,0.6308350413103968,5,8,2434,	+
chr14	21798644	21798669	G1585.1	repeat,AluSg,G1585.1,ATTTAACTAATATATATTATTTTATA,18,21798659,0.6740639089351541,8,17,207,RepeatMasker	+
chr14	30556195	30556219	G1594.1	intron,Tkt,G1594.1,TGGTATCCGCTCATAATTCCATACG,58,30556207,0.7489717885516218,2,65,339,HAVANA	+
chr14	39498298	39498320	G1602.1	NoAnnotation,,G1602.1,TGATGATCTGTGTCAAGCAAGTT,74,39498298,0.8593097793733232,3,6,474,	+
chr14	50062198	50062235	G1609.1	repeat,AluJr,G1609.1,CACCACGACTGGCTCCGGGATGGCTGGGAAGGCCCGGT,11,50062199,0.8914801138980871,3,13,28,RepeatMasker	+
chr14	50062400	50062430	G1610.1	NoAnnotation,,G1610.1,CCCTCCCATGGCGCGACCGCTCTCCCATCCC,61,50062411,0.9779411067124579,3,69,149,	+
chr14	50466034	50466073	G1611.1	NoAnnotation,,G1611.1,TAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGA,268,50466034,0.9998434328256497,3,3,1126,	+
chr14	50466094	50466119	G1612.1	NoAnnotation,,G1612.1,GGTCCGTAGCGGTCCTGACGTGCAAA,4,50466105,0.7635183466805852,2,2,12,	+
chr1	165723468	165723490	G162.1	NoAnnotation,,G162.1,ACTGGCTTAGTGAGGCCTCTGGA,41,165723490,0.8045270229754197,2,10,236,	+
chr14	58110228	58110260	G1628.1	NoAnnotation,,G1628.1,CAACATTTTATTTATTTTATATATTTATTTATT,43,58110236,0.6003656068836154,13,44,651,	+
chr1	167346347	167346369	G163.1	NoAnnotation,,G163.1,TGTGGAAGCTGCCTGCAGTCTCT,10,167346369,0.874132102816525,2,5,54,	+
chr14	64590709	64590729	G1638.1	miRNA,Mir124a-1,G1638.1,TAAGGCACGCGGTGAATGCCA,99,64590717,0.6395723695707259,2,3,288,ENSEMBL	+
chr1	167971044	167971063	G164.1	NoAnnotation,,G164.1,GGGTCCATAGCTCAGTGGTA,14,167971057,0.6510647902083717,2,2,66,	+
chr14	66868659	66868678	G1641.1	NoAnnotation,,G1641.1,CCTCGATCGCGCCTGCGCCG,33,66868678,0.658691086282255,2,2,97,	+
chr14	70989933	70989952	G1646.1	NoAnnotation,,G1646.1,GTGGGTAGAATCCTTTGCAG,8,70989933,0.9562926323659587,2,9,39,	+
chr14	76152774	76152816	G1652.1	NoAnnotation,,G1652.1,TCCCACATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCCAGG,53,76152816,0.7819774372993841,4,5,430,	+
chr14	101951410	101951432	G1677.1	NoAnnotation,,G1677.1,TAAAACGTCTGTGACCTGAGCCA,10,101951422,0.6893811242601027,2,12,30,	+
chr14	115044048	115044069	G1689.1	miRNA,Mir19a,G1689.1,TGTGCAAATCTATGCAAAACTG,48,115044062,0.7261915961163309,2,8,278,ENSEMBL	+
chr14	115044358	115044380	G1691.1	miRNA,Mir19b-1,G1691.1,TGTGCAAATCCATGCAAAACTGA,19,115044372,0.7990935418905538,2,10,85,ENSEMBL	+
chr14	115044476	115044497	G1692.1	miRNA,Mir92-1,G1692.1,TATTGCACTTGTCCCGGCCTGT,54,115044484,0.6540370579062246,2,3,425,ENSEMBL	+
chr1	171066631	171066660	G170.1	NoAnnotation,,G170.1,GCATGGGTGGTTCAGTGGTAGAATTCTCGC,71,171066636,0.7390094599789782,4,8,600,	+
chr14	120507158	120507185	G1702.1	3'utr,Rap2a,G1702.1,TTAAATTATTTTAACAAATAAATTTATT,5,120507171,0.7660793869404043,3,5,61,ENSEMBL	+
chr14	8799707	8799734	G1708.1	pseudogene,Gm9800,G1708.1,TATTTTTTATTTACATTTTATATTTTTG,14,8799707,0.7426134022715699,9,16,233,ENSEMBL	-
chr1	171074302	171074334	G171.1	repeat,L1M5,G171.1,GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTG,199,171074302,0.6803269734008114,7,8,1742,RepeatMasker	+
chr14	9655177	9655198	G1710.1	intron,Fhit,G1710.1,TTTTGCCATCTCTGACTTGAGA,7,9655192,0.7699802193561597,2,14,47,HAVANA	-
chr14	21984076	21984102	G1715.1	3'utr,Zfp503,G1715.1,AACACTTAACTATTTTTAATTTTTAAG,29,21984076,0.5664818902402301,9,25,311,HAVANA	-
chr14	30129740	30129759	G1723.1	intron,Cacna1d,G1723.1,TTTGGTATCTGTGCTTTGAA,6,30129746,0.73499461311564,2,11,49,ENSEMBL	-
chr14	30352965	30352990	G1724.1	start_codon,Cacna1d,G1724.1,TGATGATGATGATGATGATGAAAAAA,443,30352988,0.6899645674736502,3,6,2907,ENSEMBL	-
chr1	171081876	171081907	G173.1	NoAnnotation,,G173.1,GCATGGGTGGTTCAGTGGTAGAATTCTCGCCT,128,171081876,0.8389935467615427,5,12,1128,	+
chr14	51082846	51082867	G1740.1	repeat,AluJo,G1740.1,TCTCTTCGGAGGCGTGGGTTCG,17,51082855,0.9056269339649592,2,15,94,RepeatMasker	-
chr14	54642207	54642242	G1744.1	3'utr,Acin1,G1744.1,TTCAATTTTTATTTTTATTTTTTTTATTATTAAATG,8,54642220,0.6433000003583068,8,9,165,HAVANA	-
chr14	56694003	56694055	G1748.1	NoAnnotation,,G1748.1,AGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGAC,1376,56694022,0.8260345314488191,4,15,4110,	-
chr14	56694075	56694120	G1748.2	NoAnnotation,,G1748.2,ACGCGCATGAATGGATGAACGAGATTCCCTCTGTTCCTACCTACTA,51,56694090,0.9798874926639874,4,7,172,	-
chr14	59441546	59441569	G1749.1	repeat,MLT1D,G1749.1,GAATGAATGCTGGCGGCATGCTTA,27,59441564,0.7902935634190864,3,35,108,RepeatMasker	-
chr1	171103042	171103078	G175.1	NoAnnotation,,G175.1,CTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTC,352,171103078,0.9349068529837641,6,25,3484,	+
chr14	61366581	61366604	G1751.1	3'utr,Kpna3,G1751.1,TCTTAAAATATTTTTTACTTAGTA,8,61366586,0.7906226904431534,3,9,88,ENSEMBL	-
chr14	61631931	61631957	G1752.1	miRNA,Mir16-1,G1752.1,TAGCAGCACGTAAATATTGGCGTTAAG,9,61631940,0.646384284839535,2,7,40,ENSEMBL	-
chr1	171111443	171111473	G176.1	NoAnnotation,,G176.1,GTTTCCGTAGTGTAGTGGTTATCACGTTCGC,45,171111473,0.6155091747853549,4,4,499,	+
chr14	99352085	99352106	G1778.1	snRNA,Gm22984,G1778.1,ACACGTCCTCTATCCGAGGACA,11,99352085,0.8079911533793964,3,5,37,ENSEMBL	-
chr14	104715801	104715831	G1784.1	NoAnnotation,,G1784.1,TAAGCAGAACTGGCGCTGCGGGATGAACCGA,176,104715829,0.8358758842770259,3,7,518,	-
chr14	104715833	104715873	G1784.2	NoAnnotation,,G1784.2,GAGCCGGGCGTGGAATGCGAGTGCCTAGTGGGCCACTTTTG,471,104715833,0.7003908513870832,6,23,1958,	-
chr14	109727107	109727130	G1788.1	NoAnnotation,,G1788.1,ATATTTTTCTTAACTCTAAATATC,8,109727119,0.7272799839984702,3,5,86,	-
chr14	118089563	118089585	G1794.1	NoAnnotation,,G1794.1,CAGTTGGGAGAGCGTTAGACTGA,10,118089572,0.9733265616649561,2,20,30,	-
chr14	122459160	122459182	G1796.1	3'utr,Zic5,G1796.1,TACATTTAATTAATTTAATTAAG,14,122459161,0.67647674526051,4,10,139,HAVANA	-
chr15	6373377	6373401	G1798.1	NoAnnotation,,G1798.1,CATATATATAAAACCATTTTTATTA,21,6373391,0.7461763961155439,4,14,199,	+
chr15	11025033	11025054	G1802.1	intron,Slc45a2,G1802.1,TATATTTTATTCCTACTTTTTA,5,11025033,0.8118224796437573,2,7,61,ENSEMBL	+
chr15	20721317	20721337	G1807.1	NoAnnotation,,G1807.1,CACCCAATAAATTTATTATTT,6,20721317,0.7778353686123843,2,2,51,	+
chr15	29387059	29387094	G1815.1	repeat,AluJb,G1815.1,ATGATGACGATGATGATGATGATGGCCCTTGGAACT,2335,29387087,0.707922474551079,7,108,14630,RepeatMasker	+
chr15	47540015	47540069	G1834.1	NoAnnotation,,G1834.1,AACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGG,363,47540060,0.8874191562279767,5,57,1208,	+
chr15	49933414	49933436	G1838.1	NoAnnotation,,G1838.1,ACATATTTAAACTAGACTATTTA,5,49933427,0.7304890940687213,2,2,41,	+
chr1	177449614	177449643	G184.1	3'utr,Zbtb18,G184.1,TTTTTATTTTTATTTTATATAATTTAAATT,6,177449628,0.6897795033777772,3,4,107,ENSEMBL	+
chr15	52515202	52515223	G1846.1	repeat,AluSg,G1846.1,CTATCTACTTATTTATTTATTG,13,52515207,0.7088537432307961,2,3,166,RepeatMasker	+
chr15	66493418	66493437	G1859.1	NoAnnotation,,G1859.1,GTAGCCTTTGGGTTGTATGA,7,66493418,0.942005142748393,2,14,42,	+
chr1	178300303	178300328	G186.1	NoAnnotation,,G186.1,CATTTATAATAGCTATTTTATATATT,20,178300318,0.6202665487810857,6,9,210,	+
chr15	70178588	70178607	G1861.1	NoAnnotation,,G1861.1,AGGATGCCATAGCTGTGGAA,175,70178607,0.675006845864265,2,3,697,	+
chr15	71795392	71795426	G1863.1	NoAnnotation,,G1863.1,TATTAGATGTTCTCTATCATTTAATAATATACTTG,26,71795420,0.606626141379346,10,27,261,	+
chr15	81651297	81651321	G1879.1	3'utr,Ep300,G1879.1,TTTTATTATTTTTTTTAAATTAATG,8,81651321,0.7710542359163386,5,8,124,ENSEMBL	+
chr1	179960804	179960829	G188.1	repeat,(TG)n,G188.1,TACTTTTAATTATTATTTTATTTAAA,16,179960816,0.6362608273917959,7,13,231,RepeatMasker	+
chr15	85177749	85177785	G1881.1	NoAnnotation,,G1881.1,GTTAAGGGAAGTCGGCAAGCCGGATCCGTAACTTCGG,487,85177750,0.9518428923263267,6,13,1901,	+
chr15	85670351	85670370	G1885.1	repeat,AluJb,G1885.1,GCGCCCCTTGCTCCGTTGGA,12,85670357,0.6883378931742244,2,12,48,RepeatMasker	+
chr15	86194748	86194771	G1887.1	NoAnnotation,,G1887.1,CCCAAGGAGTCTAACGCGTGCGCG,40,86194748,0.8900443781933478,2,2,118,	+
chr15	86194812	86194837	G1888.1	NoAnnotation,,G1888.1,AGGTGGGATCCCGAGGCCTCTCCAGT,955,86194837,0.768735583202013,4,9,3777,	+
chr15	86194841	86194866	G1889.1	NoAnnotation,,G1889.1,CCGAGGGCGCACCACCGGCCCGTCTC,234,86194841,0.8878789940398715,2,4,452,	+
chr15	86194877	86194924	G1889.2	NoAnnotation,,G1889.2,CCGGGGAGGTGGAGCACGAGCGTACGCGTTAGGACCCGAAAGATGGTG,3175,86194895,0.9902577917031237,4,3028,7395,	+
chr15	86195209	86195240	G1890.1	NoAnnotation,,G1890.1,GAGCCGGGCGTGGAATGCGAGTGCCTAGTGGG,1270,86195229,0.6582311100888218,5,26,3907,	+
chr15	92423594	92423616	G1897.1	intron,Pdzrn4,G1897.1,AGTTCTGGGGGGAGTCTGGTTGG,9,92423602,0.7065671278019486,2,7,55,ENSEMBL	+
chr1	180690630	180690653	G190.1	NoAnnotation,,G190.1,CATAAATCTTTTATTCTTAATATT,7,180690639,0.6934558711251612,5,14,77,	+
chr15	96402471	96402492	G1901.1	3'utr,Arid2,G1901.1,CATTAAATATTTTTATCTATAT,5,96402477,0.6229314744530208,3,4,56,HAVANA	+
chr15	96402654	96402677	G1902.1	3'utr,Arid2,G1902.1,CCAATATATTTTCACTTATTTATT,19,96402665,0.7005847860624707,7,17,215,HAVANA	+
chr15	96403275	96403297	G1903.1	3'utr,Arid2,G1903.1,ATATTTTCTTCACTACTTTTTCT,5,96403294,0.6764772557541192,3,7,62,HAVANA	+
chr15	97609757	97609777	G1905.1	repeat,L1MC3,G1905.1,CAGAACGTCGTGAGACTGTTT,9,97609777,0.7293289667732406,2,8,45,RepeatMasker	+
chr15	100012598	100012624	G1908.1	3'utr,Larp4,G1908.1,AAATTACTTTTTTTAATCTATTTAAAG,10,100012614,0.6504624431071862,6,11,126,ENSEMBL	+
chr15	101274749	101274769	G1909.1	3'utr,Nr4a1,G1909.1,ATTAATATATTTAATATATTG,6,101274754,0.615392109088196,3,6,60,ENSEMBL	+
chr15	102434607	102434634	G1914.1	NoAnnotation,,G1914.1,ATTTATTTCTACTATATACATATATTTT,13,102434615,0.6186020951115463,7,11,161,	+
chr15	102498634	102498658	G1915.1	3'utr,Pcbp2,G1915.1,TTTCTACACACTTTATCATCCACTC,6,102498654,0.7424988528239301,2,3,47,ENSEMBL	+
chr15	103014969	103014989	G1917.1	miRNA,Mir615,G1917.1,TCCGAGCCTGGGTCTCCCTCT,5,103014982,0.6708408239767326,2,2,28,ENSEMBL	+
chr15	3438978	3439000	G1921.1	intron,Ghr,G1921.1,TTTAAATTATACTTAAATAGTAT,14,3438978,0.9234602702794295,2,8,138,HAVANA	-
chr15	6704793	6704812	G1922.1	NoAnnotation,,G1922.1,CATATATTTACCATTTTATT,7,6704801,0.6652118136666991,2,3,74,	-
chr15	14757128	14757151	G1927.1	NoAnnotation,,G1927.1,TTATTATTTATATTATATATTCCT,7,14757149,0.6182102204971652,3,4,97,	-
chr15	17858786	17858809	G1931.1	NoAnnotation,,G1931.1,TACATATATATATTTCTTAATTTG,34,17858786,0.7273112863348925,7,9,402,	-
chr15	23957103	23957124	G1936.1	NoAnnotation,,G1936.1,TGAAGCCAGTTATCTTTCATGA,6,23957103,0.671197689881257,2,9,39,	-
chr15	29188495	29188515	G1942.1	NoAnnotation,,G1942.1,CCATAAGGTAGGTATTGTATC,31,29188496,0.7390275433497809,2,31,186,	-
chr15	29387066	29387089	G1943.1	NoAnnotation,,G1943.1,CAAGGGCCATCATCATCATCATCG,662,29387066,0.7763183324136573,4,8,2938,	-
chr15	34267708	34267730	G1950.1	NoAnnotation,,G1950.1,TTCTCTATCATTTAATAATATAC,8,34267719,0.6482787592651201,4,6,79,	-
chr15	35443630	35443651	G1954.1	NoAnnotation,,G1954.1,ACCTTTTTATTTATTTATTTCT,7,35443638,0.6673273331884879,2,3,94,	-
chr15	37581346	37581366	G1960.1	intron,Ncald,G1960.1,GTGCTCACTGCCTGCTTTCCA,6,37581366,0.8501785839980807,2,12,30,HAVANA	-
chr15	45522617	45522639	G1968.1	NoAnnotation,,G1968.1,TACATATATATATTCTTTAATTT,14,45522619,0.7369394522533146,3,5,165,	-
chr15	48887972	48888000	G1971.1	NoAnnotation,,G1971.1,TTTTAAATTTATAATTCCATATTTATAAT,25,48887989,0.6581373007790765,11,26,323,	-
chr15	56417977	56417997	G1977.1	NoAnnotation,,G1977.1,TTGAAGACTAACTACTGTGAT,38,56417978,0.8395572561955619,2,39,204,	-
chr1	21706486	21706509	G20.1	NoAnnotation,,G20.1,TATTGGCCATCATCATCATCACCA,2580,21706486,0.8639535081399319,2,21,15520,	+
chr15	79824345	79824369	G2006.1	3'utr,Cbx6,G2006.1,TATCTTATAATTTTTTTAATTTTTA,6,79824355,0.7106551828948208,3,5,88,HAVANA	-
chr1	191120952	191121008	G201.1	repeat,LTR12C,G201.1,AAGTGAAGAAATTCAATGAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTA,656,191120970,0.910162819350416,7,40,2149,RepeatMasker	+
chr1	191121064	191121129	G201.2	repeat,LTR12C,G201.2,ATTCCCACTGTCCCCACCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAG,154,191121102,0.9964222961772947,3,8,433,RepeatMasker	+
chr15	95054241	95054260	G2021.1	NoAnnotation,,G2021.1,CTTTGGTATCTGTGCTTTTA,5,95054247,0.7271608409205509,2,9,46,	-
chr15	96687895	96687918	G2022.1	3'utr,Slc38a2,G2022.1,CTAACCTATTTTTCAATATTTATG,128,96687906,0.6447760881831929,12,111,1355,ENSEMBL	-
chr15	98127467	98127486	G2024.1	repeat,L1PA10,G2024.1,CTTGGTTATGTTGGCACTGA,15,98127474,0.8409634643064313,2,30,90,RepeatMasker	-
chr15	98538724	98538744	G2026.1	3'utr,Ccnt1,G2026.1,TTTCTCAATCTGTATTTATCC,7,98538736,0.7945190211579515,2,7,62,HAVANA	-
chr15	98733270	98733298	G2028.1	NoAnnotation,,G2028.1,GGGGCTATAGCTCAGTTGGTAGAGTGCTT,7,98733274,0.8031892888246066,2,12,46,	-
chr15	98833282	98833313	G2029.1	3'utr,Kmt2d,G2029.1,TGGGGGGTATTTATCTATTTATACATGGGATT,7,98833282,0.9832803393058083,2,7,73,ENSEMBL	-
chr16	10550905	10550930	G2037.1	intron,Clec16a,G2037.1,GGTGATGAACCTCTGGTGTACTGGTT,90,10550905,0.9939051011514116,2,171,533,HAVANA	+
chr16	11143919	11144013	G2041.1	NoAnnotation,,G2041.1,GTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCCAGGCGGAACGATACG,19907,11143925,0.9392790619446939,15,261,148566,	+
chr16	11144153	11144183	G2043.1	miRNA,Gm23935,G2043.1,CCGTTCGTCTTGGGAAACGGGGTGCGGCCGG,174,11144179,0.9948830693575098,3,321,379,ENSEMBL	+
chr16	11144220	11144297	G2045.1	NoAnnotation,,G2045.1,ACGTTCGTGTGGAACCTGGCGCTAAACCATTCGTAGACGACCTGCTTCTGGGTCGGGGTTTCGTACGTAGCAGAGCAG,1272,11144235,0.8317964889630035,14,49,8359,	+
chr1	193632891	193632930	G205.1	NoAnnotation,,G205.1,CTCCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACA,453,193632929,0.8154645038217497,5,9,2991,	+
chr16	16597589	16597615	G2050.1	repeat,THE1B,G2050.1,ACTCTATTTCTTTTTTTATTATTATTT,5,16597594,0.7515693617031765,3,7,81,RepeatMasker	+
chr16	17222220	17222242	G2052.1	NoAnnotation,,G2052.1,ATCGTTTTTTCACTGACCCGGTG,1523,17222242,0.8219984326944382,8,78,13583,	+
chr16	17222333	17222386	G2053.1	NoAnnotation,,G2053.1,CTCGGGGACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAAAG,883,17222371,0.9141405203345877,9,133,3904,	+
chr16	17222388	17222423	G2053.2	NoAnnotation,,G2053.2,TAACGCAGGTGTCCTAAGGCGAGCTCAGGGAGGACA,4149,17222388,0.5756580326039167,5,147,17940,	+
chr16	17222458	17222479	G2054.1	NoAnnotation,,G2054.1,TTGATCTTGATTTTCAGTACGA,93,17222463,0.8622720779397605,2,3,190,	+
chr16	23113605	23113629	G2061.1	3'utr,Eif4a2,G2061.1,TTCTCTATCATTTAATAATATACTT,14,23113617,0.6344261717764147,8,13,137,HAVANA	+
chr16	26076218	26076240	G2067.1	NoAnnotation,,G2067.1,TATTTCTAAATTAATATTACTTC,44,26076227,0.578132820914406,5,9,493,	+
chr16	29937785	29937806	G2072.1	NoAnnotation,,G2072.1,TGGTACCCAGAGAAGAAGCCCC,7,29937785,0.6771080319878309,2,5,6,	+
chr16	32386713	32386737	G2076.1	3'utr,Ubxn7,G2076.1,TATAAATATTTATAAATATATTTAT,8,32386733,0.6317470371501381,4,8,94,ENSEMBL	+
chr16	32631131	32631156	G2077.1	3'utr,Tfrc,G2077.1,TCATTTTGGCACTGAGATATTTATTG,6,32631156,0.7126351506490843,2,3,67,HAVANA	+
chr16	35981584	35981642	G2081.1	retained_intron,Kpna1,G2081.1,AACTGGCGCTGCGGGATGAACCGAACGCTGGGTTAAGGCGCCCGATGCCGACGCTCATC,1142,35981607,0.9817567558379421,8,514,3403,HAVANA	+
chr16	43642310	43642333	G2088.1	3'utr,Zbtb20,G2088.1,CTTCATTATACTATTATATTATTA,6,43642317,0.6915264648882053,6,9,69,HAVANA	+
chr1	5170620	5170643	G209.1	NoAnnotation,,G209.1,TGGATCGCCTCAGCTGCGGTGGGC,5,5170634,0.7665772385744463,2,5,16,	-
chr16	49289613	49289632	G2092.1	repeat,L1MCa,G2092.1,TCAACTATTTTAATAAACTG,11,49289632,0.8076122955333571,3,4,84,RepeatMasker	+
chr16	50194802	50194822	G2094.1	NoAnnotation,,G2094.1,GGTGCTTGCTGGCGGATCGCA,52,50194802,0.6939711699180392,2,2,258,	+
chr16	56536749	56536770	G2097.1	intron,Abi3bp,G2097.1,TAATTTTTCTCTTTTTATATTT,5,56536769,0.7722520939319132,2,5,71,ENSEMBL	+
chr16	63181690	63181712	G2105.1	repeat,L1PA3,G2105.1,TGAAAGGTTTTGTGCCATTCAGT,186,63181703,0.7251506452883226,2,194,1117,RepeatMasker	+
chr1	6758423	6758444	G212.1	NoAnnotation,,G212.1,AAAGTAGTATTTATAAATTAAT,10,6758433,0.6852231010836507,2,10,79,	-
chr16	79367740	79367762	G2124.1	NoAnnotation,,G2124.1,TCCAATTTATTTACCTATTTATT,5,79367750,0.6344221263771164,3,3,55,	+
chr16	83555388	83555409	G2130.1	repeat,MIRb,G2130.1,ATTCAGAGTGGTGAATGTGAAT,19,83555409,0.8350934252701006,2,2,114,RepeatMasker	+
chr16	94693445	94693467	G2143.1	3'utr,Dyrk1a,G2143.1,AATTTTACAAAAATTTATTTTCT,5,94693467,0.7067084685335812,3,3,52,HAVANA	+
chr16	4083514	4083539	G2147.1	repeat,AluSc,G2147.1,TTCATTATATTCATATTTTTTATTTG,7,4083514,0.5394485653988159,7,8,102,RepeatMasker	-
chr16	4590343	4590377	G2149.1	repeat,L2a,G2149.1,AGTTCAAGAGGGTGTGAAACCGTTAAGAGGAAAAA,18,4590368,0.796244504304433,2,12,72,RepeatMasker	-
chr16	4590409	4590436	G2150.1	repeat,L2a,G2150.1,CATGAGACCGATAGTCAACAAGTACCGT,32,4590436,0.9351746992769083,2,27,79,RepeatMasker	-
chr1	13390587	13390610	G216.1	NoAnnotation,,G216.1,CAAAATGGTAAAAGTTCATTTGAT,8,13390597,0.7656225999408838,2,9,51,	-
chr16	18533192	18533333	G2163.1	repeat,L2a,G2163.1,ATTTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGTCGCTCGCTCCTCTCC,8320,18533205,0.8275219000971886,33,252,54200,RepeatMasker	-
chr16	22061862	22061891	G2164.1	coding,Igf2bp2,G2164.1,TCAGAATTATCGGGCATTTTTTTGCTAGCC,8,22061862,0.9146088963260186,2,11,45,HAVANA	-
chr16	35981674	35981806	G2177.1	antisense,Gm15564,G2177.1,TTGTGAAGCAGAATTCACCAAGCGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGATAATCCTGCTCAG,3729,35981801,0.9919603286311893,31,219,28522,HAVANA	-
chr1	14831223	14831242	G218.1	NoAnnotation,,G218.1,CTTGGAACTGCATTGGTGAC,411,14831242,0.6219599021381524,2,2,2464,	-
chr16	50197048	50197072	G2183.1	3'utr,Bbx,G2183.1,TTATACCTACATTTATATTGTAGAA,16,50197058,0.6327673054841522,2,12,152,HAVANA	-
chr16	50559022	50559043	G2185.1	NoAnnotation,,G2185.1,TGGCTGAGAAGAAACTAACCAG,21,50559043,0.8852159064632114,2,21,40,	-
chr16	52211055	52211074	G2188.1	NoAnnotation,,G2188.1,CTTGCTGAAAGACCAAGGGT,5,52211066,0.6579177398277326,2,8,12,	-
chr16	57391117	57391185	G2192.1	intron,Cmss1,G2192.1,GAGCCGGGCGTGGAATGCGAGTGCCTAGTGGGCCACTTTTGGTAAGCAGAACTGGCGCTGCGGGATGAA,229,57391126,0.8647719771182287,10,49,906,ENSEMBL	-
chr16	57391412	57391446	G2193.1	intron,Cmss1,G2193.1,CAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCT,183,57391426,0.6617640230073917,5,74,799,ENSEMBL	-
chr16	57391471	57391520	G2193.2	intron,Cmss1,G2193.2,CGCCGGGGAGGTGGAGCACGAGCGTACGCGTTAGGACCCGAAAGATGGTG,892,57391499,0.9964639395945921,3,808,1978,ENSEMBL	-
chr16	57391606	57391663	G2194.1	intron,Cmss1,G2194.1,TCTAACGCGTGCGCGAGTCAGGGGCTCGTCCGAAAGCCGCCGTGGCGCAATGAAGGTG,6377,57391632,0.9969305745835689,9,1523,17776,ENSEMBL	-
chr16	61056446	61056469	G2198.1	NoAnnotation,,G2198.1,ATCGTTTTTTCACTGACCCGGTGA,935,61056465,0.5566970176018823,8,30,8240,	-
chr1	16428300	16428322	G220.1	intron,Stau2,G220.1,ATATACAAAGTTTTTTCTATTTA,28,16428307,0.6131689844829611,4,9,311,HAVANA	-
chr16	69103179	69103203	G2207.1	NoAnnotation,,G2207.1,TCTTTATTTAACCTTTTATTTATTT,5,69103179,0.8168591717159517,5,9,70,	-
chr16	72277789	72277813	G2211.1	NoAnnotation,,G2211.1,TATTATTTTATCATAAATTACTTGC,6,72277796,0.8396741363635535,2,6,67,	-
chr16	75821427	75821450	G2214.1	repeat,L1MEc,G2214.1,TATACATTCTAATCATATTACTTT,13,75821439,0.6280081519079725,4,5,130,RepeatMasker	-
chr1	16570342	16570367	G222.1	3'utr,Ube2w,G222.1,CCTAAACACTATTTCATTTATTTATG,13,16570356,0.6536259534732859,7,13,140,ENSEMBL	-
chr16	85794287	85794319	G2225.1	3'utr,Adamts1,G2225.1,CCTATAATAACATATTTATTTTTATACATTTAT,65,85794287,0.7449249569036523,14,52,703,HAVANA	-
chr16	90228958	90228979	G2229.1	3'utr,Scaf4,G2229.1,TTTTTAATAAACTCTATTTTCG,7,90228958,0.700190077264578,2,6,76,ENSEMBL	-
chr1	18566995	18567016	G224.1	NoAnnotation,,G224.1,ATCTGGTTGATTCTGTCAGAAG,8,18566995,0.8362343050515231,3,8,56,	-
chr17	6941885	6941942	G2246.1	NoAnnotation,,G2246.1,AGTGAAGAAATTCAATGAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAG,1255,6941903,0.8909104882521549,7,55,4490,	+
chr17	6941994	6942034	G2247.1	NoAnnotation,,G2247.1,AGATTCCCACTGTCCCTACCTACTATCCAGCGAAACCACAG,375,6942033,0.9991741058439143,4,8,2325,	+
chr17	15124172	15124192	G2251.1	repeat,L1MEg,G2251.1,TAGAAGCCTGCCTGACTGCGA,8,15124176,0.7675283242513802,2,6,23,RepeatMasker	+
chr17	22876469	22876505	G2255.1	NoAnnotation,,G2255.1,TATCTTCTGGATAAGGATTGGCTCTAAGGGCTGGGTC,780,22876501,0.8328409589938542,10,102,4879,	+
chr17	22877378	22877429	G2256.1	NoAnnotation,,G2256.1,CGGACCTGGGGAATCTGTCTGTTTAATTAAAACAAAGCACCGTGAAGGCCTC,14,22877378,0.9686683183720513,4,14,95,	+
chr17	23625086	23625105	G2264.1	NoAnnotation,,G2264.1,TCAACTATTTTAATAAATTG,14,23625095,0.624903529637099,5,13,113,	+
chr17	24666014	24666050	G2269.1	NoAnnotation,,G2269.1,CTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGT,122,24666018,0.8788022162173996,6,12,797,	+
chr17	27396401	27396420	G2276.1	NoAnnotation,,G2276.1,AACGACTTTTGGCAACGGAT,9,27396413,0.6412712359232039,2,18,27,	+
chr17	39846353	39846537	G2290.1	NoAnnotation,,G2290.1,TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGTCGCTCGCTCCTCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCCACGGG,11840,39846503,0.8916323359907586,51,673,84687,	+
chr17	39846577	39846609	G2291.1	NoAnnotation,,G2291.1,ATTTATCAGATCAAAACCAACCCGGTGAGCTCC,50,39846609,0.9981604424531895,2,4,183,	+
chr17	39846650	39846688	G2292.1	NoAnnotation,,G2292.1,TGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCGTG,2387,39846688,0.9950039155114819,7,71,7588,	+
chr17	39846743	39846839	G2292.2	NoAnnotation,,G2292.2,TGCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCG,2751,39846757,0.7072635974827038,11,67,6873,	+
chr17	39846867	39847128	G2292.3	lincRNA_exon,Gm26924,G2292.3,AGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTCCGCCGCGAGGCGAGTCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGATGCTCT,4733,39847079,0.9997358697051345,41,193,25218,HAVANA	+
chr17	39847159	39847195	G2292.4	lincRNA_exon,Gm26924,G2292.4,TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCG,116,39847187,0.8901560561177746,4,8,362,HAVANA	+
chr17	39847234	39847320	G2292.5	lincRNA_exon,Gm26924,G2292.5,ACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTG,917,39847297,0.914014804018403,15,52,7551,HAVANA	+
chr17	39847321	39847349	G2292.6	lincRNA_exon,Gm26924,G2292.6,AAATTCTTGGACCGGCGCAAGACGGACCA,526,39847345,0.9978996163793178,2,3,747,HAVANA	+
chr17	39847352	39847396	G2292.7	lincRNA_exon,Gm26924,G2292.7,GCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAG,427,39847369,0.9569165147314915,3,55,1566,HAVANA	+
chr17	39847406	39847479	G2293.1	lincRNA_exon,Gm26924,G2293.1,CGAAGACGATCAGATACCGTTGTAGTTCCAACCATAAACGATGCCGACTGGCAATGCGGCGGCGTTATTCCCAT,539,39847456,0.9992300342018263,5,461,1369,HAVANA	+
chr17	39847509	39847576	G2293.2	lincRNA_exon,Gm26924,G2293.2,AGTCTTTGGGTTCCGGGGGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCA,3436,39847540,0.9578767820778697,14,866,15522,HAVANA	+
chr17	39847578	39847637	G2293.3	lincRNA_exon,Gm26924,G2293.3,CAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCTCACCCGGCCCGGACA,3875,39847612,0.9507935240292865,9,123,14505,HAVANA	+
chr17	39847721	39847773	G2293.4	lincRNA_exon,Gm26924,G2293.4,TCTGGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACTAGTTACGCGA,2165,39847744,0.6097931812430508,11,104,11158,HAVANA	+
chr17	39847860	39847909	G2293.5	lincRNA_exon,Gm26924,G2293.5,CCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTG,2471,39847879,0.8413835247909955,10,199,8084,HAVANA	+
chr17	39847977	39848055	G2293.6	lincRNA_exon,Gm26924,G2293.6,CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGCCATAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTAC,5901,39848026,0.6208478703042395,17,279,21023,HAVANA	+
chr17	39848057	39848201	G2293.7	lincRNA_exon,Gm26924,G2293.7,CACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGGCCCACGGCCCTGGTGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTA,5915,39848110,0.9860821287269929,25,391,20351,HAVANA	+
chr17	44894803	44894823	G2300.1	intron,Supt3,G2300.1,GCTTGGTACTGAGCTTGGATC,5,44894813,0.7526268435792461,2,9,26,HAVANA	+
chr17	47611065	47611084	G2307.1	NoAnnotation,,G2307.1,TTTTCTCGGGTCCCCGCGCG,43,47611067,0.5989118399282917,2,44,214,	+
chr17	50799401	50799422	G2314.1	NoAnnotation,,G2314.1,TGACACAGGTGGGTGAGATGAG,8,50799401,0.9837254336388683,2,12,16,	+
chr1	34434848	34434883	G232.1	NoAnnotation,,G232.1,TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTTC,40,34434848,0.9346203171958367,2,2,361,	-
chr17	66817399	66817419	G2328.1	repeat,LTR16A1,G2328.1,CTCATTTTAATTTATTAATTG,5,66817410,0.7089203576121996,2,4,56,RepeatMasker	+
chr17	70963669	70963733	G2334.1	lincRNA_intron,Gm26561,G2334.1,TGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCAGTACGAG,4006,70963669,0.8276361466111846,22,302,38538,ENSEMBL	+
chr17	70963734	70963775	G2334.2	lincRNA_intron,Gm26561,G2334.2,AGGAACCAAAGGTTCAGACATTTGGTGTATGTGCTTGGCTGA,263,70963735,0.8035455605017224,8,14,2414,ENSEMBL	+
chr17	70963794	70963835	G2334.3	lincRNA_intron,Gm26561,G2334.3,CTACTATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAA,140,70963832,0.9637648392499941,5,15,951,ENSEMBL	+
chr17	74702990	74703016	G2340.1	3'utr,Birc6,G2340.1,AATTTATTACATTCAACATATTTAATT,9,74703003,0.7812071793114795,3,9,92,HAVANA	+
chr17	6760622	6760643	G2368.1	intron,Ezr,G2368.1,ATTTATTATACAAATATATATT,6,6760634,0.7472375748874299,2,2,63,HAVANA	-
chr17	7952374	7952421	G2372.1	NoAnnotation,,G2372.1,AAGTGAAGAAATTCAATGAAGCGCGGGTAAACGGCGGGAGTAACTATG,215,7952403,0.9538275279389906,3,24,516,	-
chr17	15250971	15250991	G2376.1	NoAnnotation,,G2376.1,ATCTTTTATTTTCTATTATTT,12,15250982,0.62989303359999,3,6,174,	-
chr17	15806827	15806857	G2377.1	3'utr,Rgmb,G2377.1,CACTTTATTTTTTATATATTAAATATTTATG,63,15806844,0.5897229364000661,14,65,908,ENSEMBL	-
chr17	23584121	23584145	G2382.1	intron,Zfp13,G2382.1,TCTTTTTTACTTATTTTTATTTATA,6,23584138,0.6393985776514027,5,5,101,ENSEMBL	-
chr17	24139008	24139030	G2383.1	intron,Pdpk1,G2383.1,TGTCAGGGAAAGTTGAAAAGCAT,11,24139030,0.8558007218259611,2,5,33,HAVANA	-
chr17	26294607	26294627	G2385.1	repeat,MER103C,G2385.1,GCCTCAGTAGCTCAGCTGGCT,6,26294607,0.6998834737081605,2,2,24,RepeatMasker	-
chr17	46017362	46017394	G2397.1	3'utr,Vegfa,G2397.1,TTTCAATATACATTTACATACTATATATATATT,7,46017381,0.6507440465286418,5,14,75,ENSEMBL	-
chr17	46017605	46017630	G2398.1	3'utr,Vegfa,G2398.1,TTAATATTTAATTTCAACTATTTATG,26,46017617,0.6466863818797443,9,31,309,ENSEMBL	-
chr17	46017682	46017711	G2399.1	3'utr,Vegfa,G2399.1,TACTTATTTAATAGCCCTTTTTAATTAGAA,10,46017685,0.801901193984766,4,9,119,HAVANA	-
chr1	38981513	38981534	G240.1	repeat,L1PB,G240.1,GCATCCTTGGCTCAGCTGGATA,17,38981526,0.645439691934011,3,6,93,RepeatMasker	-
chr17	50420135	50420178	G2409.1	repeat,L1MA1,G2409.1,CACCTAGCAGCTGACTTAGAACTGGTGCGGACCAGGGGAATCCT,482,50420169,0.9602405872011538,6,91,1776,RepeatMasker	-
chr17	54598145	54598166	G2414.1	repeat,MIRc,G2414.1,TCACATATTTCATTTTAAATGT,33,54598145,0.8011715374887364,6,20,312,RepeatMasker	-
chr17	55133127	55133149	G2415.1	NoAnnotation,,G2415.1,AAAAGGAGTTGGTTGATATAGAA,31,55133149,0.8166906056345316,2,2,184,	-
chr17	55534732	55534755	G2416.1	NoAnnotation,,G2416.1,TACTTACATAATTTTAGAATAGTG,5,55534741,0.6535687698106443,2,5,42,	-
chr17	61122926	61122945	G2420.1	repeat,L1ME3E,G2420.1,ATTATTCTAGCTATTTATTT,26,61122945,0.7753413711236687,2,2,310,RepeatMasker	-
chr17	64281329	64281354	G2422.1	3'utr,Pja2,G2422.1,CATTTATCTTATTTCTCTATTTTATG,24,64281340,0.6272329377401842,8,26,309,HAVANA	-
chr17	65953694	65953714	G2425.1	NoAnnotation,,G2425.1,TTACTATTACTTATTATTATC,9,65953698,0.6609300139923234,4,4,103,	-
chr17	65969624	65969651	G2426.1	3'utr,Ankrd12,G2426.1,TCTTCCTTTTTAATAACTTATTTTATAC,7,65969639,0.7530350579950162,3,7,92,HAVANA	-
chr17	67718887	67718907	G2429.1	NoAnnotation,,G2429.1,TTTAACTGTGATAAACTATAG,23,67718887,0.9238168430426158,2,21,163,	-
chr17	71273179	71273205	G2430.1	intron,Emilin2,G2430.1,GCGGATGTAGCTCAGCTGGTAGAGTGC,10,71273205,0.7429275857660768,3,8,43,ENSEMBL	-
chr17	73992061	73992089	G2433.1	NoAnnotation,,G2433.1,GCGAATGTAGCTCAGTTGGTAGAGCATGA,5,73992061,0.7883345126006248,2,5,27,	-
chr17	81838405	81838432	G2441.1	NoAnnotation,,G2441.1,TTCCCACTGTCCCTACCTACTATCTAGC,69,81838432,0.8205184268607741,2,2,499,	-
chr17	81838543	81838582	G2443.1	NoAnnotation,,G2443.1,GACTCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAG,640,81838581,0.913090088167722,7,15,5592,	-
chr17	84184673	84184700	G2444.1	NoAnnotation,,G2444.1,TAATATTTATTTCATTAATTTCTTTCCT,29,84184685,0.723518968289214,7,26,370,	-
chr17	84184836	84184855	G2445.1	NoAnnotation,,G2445.1,ATATATATTCTTTTATTATG,18,84184844,0.6582209814156461,3,17,199,	-
chr17	84184918	84184945	G2446.1	NoAnnotation,,G2446.1,AAAACTATTTAACTTATTTATTATCTTG,100,84184927,0.6176235122613021,11,89,1056,	-
chr17	84930855	84930874	G2448.1	NoAnnotation,,G2448.1,CTCTCCCCGTGCGTTTGCCG,11,84930866,0.834677813534933,2,12,54,	-
chr17	87433857	87433881	G2452.1	3'utr,Calm2,G2452.1,TTCTTCCCTTATCTTACTGTCATTG,7,87433867,0.7505368068053108,2,4,69,HAVANA	-
chr18	5146883	5146907	G2460.1	NoAnnotation,,G2460.1,CTTTGGGACCTGAAAGATGGTGAAC,9,5146893,0.8819779049800024,2,6,29,	+
chr18	5774355	5774383	G2461.1	3'utr,Zeb1,G2461.1,TCTTATTTTTATATTTCTTTATTTATTAC,38,5774364,0.5918117822432248,14,44,679,HAVANA	+
chr18	5774412	5774439	G2462.1	3'utr,Zeb1,G2462.1,TATTAATACAATAATATATTTTAGTATG,37,5774433,0.6812417349126383,9,52,407,HAVANA	+
chr18	7030146	7030174	G2464.1	repeat,L1MC4a,G2464.1,TTCCTGTGGAACCTGGCGCTAAACCATTC,328,7030165,0.5777923436605844,3,9,1491,RepeatMasker	+
chr18	7030218	7030241	G2465.1	repeat,L1MC4a,G2465.1,CAGATCCCTCGCTGCGATCTATTG,19,7030226,0.6476415343076698,2,2,127,RepeatMasker	+
chr18	7913877	7913898	G2466.1	intron,Wac,G2466.1,ATTTCTCCATTTTATTATCTTT,9,7913881,0.5749332307677993,4,9,113,HAVANA	+
chr18	10103493	10103513	G2467.1	NoAnnotation,,G2467.1,TGAAGGCAGTTATCTTTGGAA,5,10103513,0.6791914388279613,2,6,29,	+
chr18	11808404	11808425	G2469.1	NoAnnotation,,G2469.1,TATAATAACCCTTTTATTATTA,5,11808410,0.5972522679221841,4,5,50,	+
chr18	34533589	34533610	G2482.1	NoAnnotation,,G2482.1,AATTTTTCTTTAACTTATTTTG,8,34533610,0.7356666846381843,3,8,99,	+
chr18	36344849	36344868	G2484.1	repeat,L1PB1,G2484.1,TTTGGAGATGGGGTCTTATG,13,36344851,0.875534012468317,2,26,78,RepeatMasker	+
chr18	36456066	36456089	G2485.1	repeat,L1MC4,G2485.1,AACTATAAACTCTAATTTTTTTTA,5,36456075,0.8531640534475564,2,6,53,RepeatMasker	+
chr18	36591138	36591159	G2486.1	nonsense_mediated_decay,Ankhd1,G2486.1,TATCAACATTTTTAAATTAAAT,43,36591156,0.6310514384510463,10,43,381,HAVANA	+
chr18	37841800	37841825	G2488.1	3'utr,Pcdhga9,G2488.1,CAAGTTTTATACTCTAATATTTATAT,13,37841817,0.6242299190518781,6,11,153,ENSEMBL	+
chr18	41129223	41129242	G2492.1	NoAnnotation,,G2492.1,TTTGGTGTCAAGAGGGAAAC,12,41129223,0.69235974193874,2,24,36,	+
chr18	42341334	42341354	G2495.1	3'utr,Rbm27,G2495.1,TTTATACATTTAAATTCATAT,5,42341348,0.7229198231188975,3,4,51,ENSEMBL	+
chr18	46872388	46872410	G2502.1	intron,4833403I15Rik,G2502.1,ACAACCTCTACTTTTTTCTTTTG,7,46872410,0.569924044631484,6,6,73,ENSEMBL	+
chr18	47005408	47005428	G2503.1	intron,Commd10,G2503.1,ATGGCAGCTGCTGTGATGATG,99,47005423,0.6390786494432877,2,2,592,ENSEMBL	+
chr18	53198739	53198766	G2509.1	intron,Snx2,G2509.1,GGGGGTGTAGCTCAGTTGGTTAGAGTGA,89,53198766,0.8983785098624602,5,41,601,ENSEMBL	+
chr1	46075938	46075981	G251.1	NoAnnotation,,G251.1,CAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCA,29,46075938,0.9990265179791759,2,3,95,	-
chr1	46076070	46076093	G251.2	NoAnnotation,,G251.2,CCAAATGCCTCGTCATCTAATTAG,55,46076090,0.7272088154166655,2,5,323,	-
chr1	46076111	46076158	G251.3	NoAnnotation,,G251.3,CAAAGTGAAGAAATTCAATGAAGCGCGGGTAAACGGCGGGAGTAACTA,207,46076138,0.9804472813497592,2,35,415,	-
chr18	54342866	54342887	G2511.1	NoAnnotation,,G2511.1,GTCTTGGGTGCTTGCTCGTGGA,9,54342887,0.9336083289933398,2,12,59,	+
chr18	58435595	58435616	G2517.1	NoAnnotation,,G2517.1,TGTTCTAGCATTCTAGGTCCCA,19,58435595,0.8460726666488498,2,8,132,	+
chr18	64393689	64393711	G2523.1	3'utr,Onecut2,G2523.1,TAACTTATTTATTTAACTTATTC,11,64393692,0.5730597603345916,6,10,128,ENSEMBL	+
chr18	64965701	64965722	G2524.1	intron,Nedd4l,G2524.1,CTCAAGTCTTTGGTGAATTTGC,5,64965714,0.6593030085675078,2,6,27,ENSEMBL	+
chr18	65640262	65640281	G2525.1	intron,Zfp532,G2525.1,TGGGAATTGTGAGCGGATTC,12,65640262,0.819508944860014,2,3,68,HAVANA	+
chr18	66430103	66430123	G2528.1	repeat,MER44C,G2528.1,GTCGGTTTAGCTCAGTTGGTA,14,66430103,0.944077412570146,2,20,92,RepeatMasker	+
chr18	68692243	68692286	G2531.1	repeat,LTR8,G2531.1,TGGAGCCGGGCGTGGAATGCGAGTGCCTAGTGGGCCACTTTTGG,1688,68692243,0.8642965852752769,7,49,6448,RepeatMasker	+
chr18	68692291	68692317	G2531.2	repeat,LTR8,G2531.2,CAGAACTGGCGCTGCGGGATGAACTGG,146,68692317,0.9534621295055314,2,5,431,RepeatMasker	+
chr18	70691549	70691569	G2534.1	repeat,L1MCa,G2534.1,TACAGAATTGAAGCCCTGGTA,9,70691549,0.7894824578794969,2,9,30,RepeatMasker	+
chr1	52144545	52144567	G255.1	NoAnnotation,,G255.1,GACTGAAGTGGGGAATGGTTTCC,11,52144545,0.7861475850009958,2,6,51,	-
chr18	86375548	86375569	G2552.1	NoAnnotation,,G2552.1,TATTTTAGTCTAACATATTTAT,5,86375556,0.7623870898285842,2,10,50,	+
chr18	10052132	10052154	G2560.1	NoAnnotation,,G2560.1,CGCGGCGCCTCGCCTCGGCCGCC,254,10052154,0.7079310615116102,2,4,504,	-
chr18	14582159	14582179	G2566.1	NoAnnotation,,G2566.1,TCATATATTTCATTTTAAACT,10,14582159,0.7517343014544997,3,5,99,	-
chr18	24780152	24780173	G2572.1	NoAnnotation,,G2572.1,AACTCTGGTCTCTTCTCTTCAG,5,24780161,0.7390411636980687,2,10,35,	-
chr18	27407191	27407213	G2575.1	NoAnnotation,,G2575.1,ATACATTTTTATTTCATAATTTT,5,27407207,0.6907446017137823,2,2,61,	-
chr18	27546647	27546668	G2576.1	NoAnnotation,,G2576.1,ACTACATTAATTATTTTAACTG,7,27546663,0.6809961218936061,5,14,56,	-
chr18	34938180	34938205	G2579.1	3'utr,Hspa9,G2579.1,TATTCTATATATAATTTCCTTAATAT,8,34938189,0.7133510353910183,4,7,92,HAVANA	-
chr18	36505697	36505723	G2580.1	3'utr,Hbegf,G2580.1,TTTTTAACAATCTAACAATAATATTTC,5,36505718,0.6726223360583877,4,7,53,ENSEMBL	-
chr18	36505745	36505772	G2581.1	3'utr,Hbegf,G2581.1,CCTTTTAAATTATATATTTATTTTATTC,8,36505769,0.7284099242657088,6,13,110,ENSEMBL	-
chr18	38586370	38586397	G2583.1	3'utr,Spry4,G2583.1,CTCTATTTTAATAGTATTTATTTTAGAA,24,38586371,0.8076896228902724,6,29,328,ENSEMBL	-
chr18	39413000	39413025	G2584.1	3'utr,Nr3c1,G2584.1,AACTTCTAATATATTTTTATATTTAG,7,39413007,0.6543264937919182,5,9,82,HAVANA	-
chr18	42899056	42899076	G2586.1	intron,Ppp2r2b,G2586.1,TCGTTGGGAATTGGAGCTGAA,183,42899065,0.9321902669074806,2,366,732,HAVANA	-
chr18	49184500	49184520	G2590.1	repeat,LTR36,G2590.1,CTTTCACAATTCCTCTCTAGA,7,49184507,0.7145118179831521,2,8,48,RepeatMasker	-
chr18	54698977	54699005	G2595.1	NoAnnotation,,G2595.1,CGGGCCGCCGGTGAAATACCACTACTCTC,106,54699005,0.9711179992166555,4,4,505,	-
chr18	54699078	54699119	G2596.1	NoAnnotation,,G2596.1,CTTGACTCTAGTCTGGCACGGTGAAGAGACATGAGAGGTGTA,1023,54699079,0.7248132774931714,5,22,4496,	-
chr18	54699174	54699226	G2596.2	NoAnnotation,,G2596.2,CATGAATGGATGAACGAGATTCCCACTGTCCCTACCTACTATCCAGCGAAACC,202,54699184,0.9089255207675354,7,10,1034,	-
chr18	54699276	54699350	G2597.1	NoAnnotation,,G2597.1,TGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAAACGGTGGGAGTAACT,2445,54699301,0.9952903802844997,10,40,13314,	-
chr1	56782102	56782131	G260.1	repeat,L2a,G260.1,CCCGGGGCTGCACGCGCGCTACACTGACTG,179,56782124,0.9510633765392817,3,116,398,RepeatMasker	-
chr1	56782262	56782384	G261.1	repeat,L2a,G261.1,AAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATGGCCATTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAAC,1013,56782367,0.8898833757719581,19,47,6872,RepeatMasker	-
chr18	65427766	65427791	G2618.1	NoAnnotation,,G2618.1,GTTTCCCAGGCTGGAGTGCAGTGGCT,26,65427775,0.7119219176195359,4,22,93,	-
chr1	56794884	56794915	G262.1	3'utr,Satb2,G262.1,TAATATAACTGTTAATACTATTTATATATTTG,8,56794900,0.6863441571351333,5,9,88,HAVANA	-
chr18	73533433	73533507	G2623.1	rRNA,n-R5-8s1,G2623.1,CTAGCTGTCAGAATTAATGTGAACTGCAGGACACATTGATCATTGACACTTCAAATGCACTTGCAGCCCCGGGTT,1318,73533463,0.9299592833171328,8,1232,7741,ENSEMBL	-
chr18	75168509	75168536	G2627.1	repeat,LOR1-int,G2627.1,GGGGCCGTAGCTCAGTTGGTAGAGCACT,14,75168520,0.6741945339434734,2,12,59,RepeatMasker	-
chr1	63052459	63052483	G264.1	3'utr,Ino80d,G264.1,CTATTAACATCACCTCATAAATTAT,6,63052459,0.8130444324330768,3,3,39,ENSEMBL	-
chr18	84012460	84012482	G2641.1	3'utr,Tshz1,G2641.1,ACACAAAACTTATTTAATAATTA,7,84012482,0.7787722677339107,4,5,49,HAVANA	-
chr18	85697945	85697994	G2642.1	NoAnnotation,,G2642.1,CCTGGGTGGAGCCTCCACAGGTGCAGATCTTGGTGGTAGTAGCAAATATT,199,85697994,0.9999414888929549,7,11,1305,	-
chr18	85698017	85698049	G2643.1	NoAnnotation,,G2643.1,CCATGAGTAGGAGGGCCACTGCGGTGAGCCTTG,281,85698049,0.9805489885698089,4,26,1064,	-
chr18	85698223	85698267	G2645.1	NoAnnotation,,G2645.1,TGTGTAACAACTCACCTGCCGAATCAACTAGCCCTGAAAATGGAT,369,85698232,0.6346330868938785,7,29,1501,	-
chr19	12011949	12011974	G2655.1	NoAnnotation,,G2655.1,TTATCACGTCTGCTTTACACGCAGAA,11,12011972,0.9268644259329453,2,2,56,	+
chr19	13054777	13054834	G2657.1	NoAnnotation,,G2657.1,AATCCATTGGAGGGCAAGTCTGGTGCCAGCACCTGCGGTAATTCCAGCTCCAGTAGCG,240,13054810,0.9972571316998031,4,8,1127,	+
chr19	13529995	13530018	G2658.1	coding,Olfr1480,G2658.1,TATTACGGAGAGTTTTATCCTGGC,9,13529995,0.8330109607857306,2,2,61,ENSEMBL	+
chr19	22852046	22852080	G2669.1	intron,Trpm3,G2669.1,TGACGCGCATGAATGGATGAACGAGATTCCCACTG,439,22852047,0.8358018381091956,5,10,1789,ENSEMBL	+
chr19	22852117	22852145	G2669.2	intron,Trpm3,G2669.2,AACAGGCTTGGCGGAATCAGTGGGGAAAG,46,22852142,0.998254320601595,2,15,77,ENSEMBL	+
chr1	65307190	65307213	G267.1	NoAnnotation,,G267.1,TCATACTTTCTAGTTTTATTATTT,31,65307200,0.6036861291572962,4,5,413,	-
chr19	30093695	30093714	G2677.1	3'utr,Uhrf2,G2677.1,TATACCTTAATAAATATTTT,10,30093714,0.6838496033196998,5,7,92,HAVANA	+
chr19	35991033	35991055	G2681.1	NoAnnotation,,G2681.1,TATTTTTAAACTAATACTATTTA,6,35991039,0.7344462508725069,2,7,61,	+
chr19	39976027	39976047	G2685.1	NoAnnotation,,G2685.1,ATTCTTATATTTATTTATTAT,6,39976041,0.6769039236516333,3,6,78,	+
chr19	40119762	40119820	G2687.1	NoAnnotation,,G2687.1,CAAGCGTTCATAGCGACATCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGT,339,40119762,0.9377358309321784,11,22,3078,	+
chr19	40119832	40119888	G2687.2	NoAnnotation,,G2687.2,CACCAAGCGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGT,870,40119857,0.7819344614678583,11,50,5729,	+
chr19	53354633	53354657	G2695.1	intron,Mxi1,G2695.1,TATATATATAATTTATTTAATATTT,15,53354649,0.5703273594662428,8,13,194,ENSEMBL	+
chr1	72858002	72858027	G271.1	3'utr,Igfbp5,G271.1,TATTCTATTTATTCAACTTATAATTT,5,72858010,0.7957656978042279,3,5,67,HAVANA	-
chr19	4287044	4287068	G2712.1	3'utr,Adrbk1,G2712.1,CCTTTTATAAACCTCTAATTTATTT,10,4287052,0.6589225198371619,6,10,112,HAVANA	-
chr19	5507519	5507566	G2716.1	intron,Snx32,G2716.1,TAACATTTTATTTTATTTTATTTTATTTTATTTATCTATTTATTTATT,6,5507519,0.6867534589639086,4,7,112,ENSEMBL	-
chr19	7472775	7472795	G2717.1	intron,Rtn3,G2717.1,CTTACTGGTACTAATCCTTCA,10,7472790,0.6381230479430035,2,19,61,ENSEMBL	-
chr19	8252434	8252462	G2720.1	NoAnnotation,,G2720.1,CCACGACTGGCTCCTGGACGGCTGGAAAG,118,8252462,0.9937605755948172,2,119,353,	-
chr19	12009741	12009768	G2724.1	repeat,L1MC2,G2724.1,GCCCGGATAGCTCAGTCGGTAGAGCATC,28,12009768,0.8095879135914136,2,2,122,RepeatMasker	-
chr19	19759498	19759518	G2731.1	NoAnnotation,,G2731.1,CATACAATGGTCAGAACAGAG,102,19759498,0.9615601493225175,2,2,304,	-
chr19	21591489	21591509	G2732.1	NoAnnotation,,G2732.1,CCTGAGCTGGGTTTAGAACGT,13,21591509,0.8861535617132178,2,11,65,	-
chr19	37575382	37575407	G2751.1	repeat,L1MCc,G2751.1,AGCTCAGCTGGGAGAGCATTAGACTG,6,37575397,0.7579682051201442,2,3,23,RepeatMasker	-
chr19	46861531	46861554	G2755.1	repeat,MER21-int,G2755.1,TTTCTAGATGAGGTCTCTCACCGG,6,46861531,0.8459361941540278,2,2,33,RepeatMasker	-
chr19	49685687	49685719	G2759.1	NoAnnotation,,G2759.1,TTTAATTAAAACAAAGCATTGTGAAGGCCTGCG,14,49685687,0.9996383931275729,4,12,86,	-
chr19	49685741	49685770	G2760.1	NoAnnotation,,G2760.1,GGGCGCCTAGCAGCTGACTTAGAACTGGTA,126,49685757,0.8854097814651192,2,126,579,	-
chr19	51142472	51142514	G2763.1	NoAnnotation,,G2763.1,AGCCGAACGCCGGGTTAAGGCGCCCGTTGCCGACGCTCATCAG,48,51142514,0.8531326688636593,2,45,145,	-
chr19	51142541	51142569	G2764.1	NoAnnotation,,G2764.1,GAATGCGAGTGCCTAGTGGGCCACTTTTG,174,51142566,0.7858647436847048,2,3,1322,	-
chr19	59408839	59408861	G2773.1	NoAnnotation,,G2773.1,TGGCTGGTGAAATTGGTAGACAC,5,59408848,0.6566495950812923,2,4,23,	-
chr19	59559610	59559634	G2774.1	NoAnnotation,,G2774.1,ATATTTGCTCACAATTCCCCCAAAA,23,59559629,0.6896716558661288,2,34,127,	-
chr19	59904206	59904225	G2775.1	3'utr,Rab11fip2,G2775.1,TACATAATTAAACTATTTCT,5,59904206,0.6709689629720812,2,3,40,HAVANA	-
chr19	60429949	60429972	G2777.1	NoAnnotation,,G2777.1,GGGGATTTAGCTTAGTTGGTAGAG,17,60429972,0.8915111829425176,2,18,118,	-
chr19	61198609	61198662	G2779.1	NoAnnotation,,G2779.1,CTCCGGGGACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAAC,1128,61198623,0.7938860779991755,9,143,4610,	-
chr2	4907812	4907838	G2781.1	3'utr,Sephs1,G2781.1,TTATTCAAATAAATATTTAATTTTTTT,15,4907821,0.5807116372095233,7,10,192,HAVANA	+
chr2	13878766	13878804	G2789.1	NoAnnotation,,G2789.1,TGACCAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGTCC,70,13878803,0.9125519168617559,3,19,231,	+
chr1	78386180	78386202	G279.1	NoAnnotation,,G279.1,TTAACTATGGGTGACCAGGATGC,26,78386180,0.9996721886489065,2,21,110,	-
chr2	19136508	19136530	G2793.1	NoAnnotation,,G2793.1,TGTTGTGAGGTTAAGTGACTAGA,2054,19136524,0.8386758971270118,6,2064,12318,	+
chr2	20899846	20899909	G2797.1	NoAnnotation,,G2797.1,ATGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGA,156,20899870,0.9417681147777657,7,18,680,	+
chr2	20900134	20900177	G2798.1	NoAnnotation,,G2798.1,GAGCCGGGCGTGGAATGCGAGTGCCTAGTGGGCCACTTTTGGTA,1338,20900175,0.8307893085518535,7,23,5220,	+
chr2	25182586	25182608	G2804.1	3'utr,Nrarp,G2804.1,TACCCATATTTATATTTTTATAA,11,25182605,0.7291653991341315,4,10,117,HAVANA	+
chr2	25308336	25308355	G2806.1	NoAnnotation,,G2806.1,GCATCCGTAGTTCATCTGGA,13,25308345,0.665953181658064,2,12,66,	+
chr2	27121274	27121303	G2814.1	NoAnnotation,,G2814.1,TCCCCCAACTTCTTAGAGGGACAAGTGGCG,38,27121275,0.8185659872010478,2,2,188,	+
chr1	80282652	80282672	G282.1	coding,Cul3,G282.1,AATACCTCTCATTATTTATTG,11,80282663,0.6840394140737883,3,8,102,HAVANA	-
chr2	40697653	40697674	G2828.1	repeat,L1ME4a,G2828.1,TATACTTTAAATTATCTTGATT,5,40697674,0.890053363071836,2,5,53,RepeatMasker	+
chr2	43011695	43011716	G2830.1	NoAnnotation,,G2830.1,GTCAAGTGACTAAGTGAATGTG,72,43011716,0.5885336991818212,3,3,407,	+
chr2	46496717	46496736	G2835.1	NoAnnotation,,G2835.1,CAATCAGCAATGATTGTTTG,7,46496726,0.8545582030396669,2,14,35,	+
chr2	47709751	47709773	G2836.1	repeat,FLAM_A,G2836.1,TTCAAGGAGTCTAACATCTATGC,32,47709751,0.9855818198745768,2,10,163,RepeatMasker	+
chr2	62499425	62499449	G2846.1	NoAnnotation,,G2846.1,AGTGTGTAGAGATGTGGAGGAATAT,62,62499428,0.736233982965165,3,73,266,	+
chr2	67810356	67810376	G2850.1	repeat,L1PA15-16,G2850.1,TATTTATTTTCTATTCCATAC,7,67810376,0.9467300447902145,2,6,78,RepeatMasker	+
chr2	71876874	71876893	G2856.1	intron,Pdk1,G2856.1,CATCCTTTATTTCTAATATT,26,71876893,0.8384880403634737,2,3,283,HAVANA	+
chr1	85864533	85864565	G286.1	NoAnnotation,,G286.1,TTTAATTAAAACAAAGCATCATGAAGGCCCGTG,65,85864533,0.9781127913024396,3,59,388,	-
chr2	73278363	73278393	G2861.1	processed_transcript,Sp9,G2861.1,AAACTTTATTTATTTTAACTCTAATCTTATT,5,73278380,0.7537633289336637,3,5,67,HAVANA	+
chr2	73867942	73867978	G2863.1	repeat,MLT1J2,G2863.1,ACGACCTGCTTCTGGGTCGGGGTTTCGTACGTAGCAG,589,73867978,0.7754364057573709,6,22,4833,RepeatMasker	+
chr2	78920357	78920378	G2869.1	3'utr,Ube2e3,G2869.1,CATTTTAGCCTAATTCATTATC,6,78920360,0.7530128497720516,2,5,55,HAVANA	+
chr1	86352060	86352087	G287.1	snoRNA,Gm24148,G287.1,TGGATATGATGACTGATTACCTGAGAAA,9,86352084,0.5982294094692437,2,2,53,ENSEMBL	-
chr2	84582601	84582622	G2874.1	repeat,L1PA7,G2874.1,TTTTGGTATCTGCACTCTGCTA,18,84582622,0.9181124744756541,2,11,152,RepeatMasker	+
chr2	91015311	91015344	G2876.1	3'utr,Celf1,G2876.1,CTCCGGGGTGGAGAATATTTATTACCTAAATTAT,5,91015311,0.9852676874636834,4,5,43,HAVANA	+
chr2	103790240	103790260	G2888.1	NoAnnotation,,G2888.1,TGAGTTCAGTCAGAGGAGCCA,30,103790240,0.7435847487056606,2,47,60,	+
chr2	104982262	104982287	G2890.1	intron,Ccdc73,G2890.1,CTTGTATTATAACATTAATATTATTG,7,104982276,0.7415527612943338,2,5,69,HAVANA	+
chr2	109449441	109449460	G2896.1	repeat,L1MC2,G2896.1,AAATTGGACATAGCACTCCA,9,109449441,0.9955761415227409,2,18,18,RepeatMasker	+
chr2	122377968	122378000	G2906.1	NoAnnotation,,G2906.1,GCCGTGATCGTATAGTGGTTAGTACTCTGCGTT,40,122377968,0.7119427196083906,5,8,389,	+
chr2	135271542	135271563	G2915.1	intron,Plcb1,G2915.1,AAAGTCCAAGGGTTTCTGTGCA,5,135271563,0.8282301116957383,2,10,20,HAVANA	+
chr2	138287148	138287169	G2917.1	3'utr,Btbd3,G2917.1,TCTAATTTCTACATAATTATTG,11,138287157,0.6389365322820453,7,11,108,HAVANA	+
chr2	142366273	142366297	G2922.1	intron,Macrod2,G2922.1,TCTTCCATAGTATTTATTTTATTAG,9,142366295,0.795955860660128,2,7,95,HAVANA	+
chr2	149642944	149642963	G2925.1	NoAnnotation,,G2925.1,TTATTTAATCTCCATTTATT,19,149642944,0.7265597588025133,2,3,225,	+
chr2	158813797	158813820	G2938.1	intron,Dhx35,G2938.1,ACTTTGAGGTTGTGCCCTTGAGGC,134,158813800,0.6527866878920299,3,4,1065,HAVANA	+
chr2	164229232	164229253	G2944.1	NoAnnotation,,G2944.1,ATTTCATAATAAATTTATATTT,6,164229251,0.6343439867542845,2,2,68,	+
chr2	170518802	170518823	G2948.1	stop_codon,Pfdn4,G2948.1,TAAACATTTTATAATACTTTTT,7,170518812,0.7397163106286531,3,3,80,HAVANA	+
chr2	178462924	178462947	G2954.1	intron,Cdh26,G2954.1,GCCCTTTGTCTAGAGGCCAAGGAC,7,178462947,0.9335012419535428,2,7,28,HAVANA	+
chr2	180585993	180586014	G2957.1	repeat,L1ME3D,G2957.1,TATTTCACTATTTAATTTTTAA,11,180586014,0.7253994332211477,5,12,131,RepeatMasker	+
chr2	180894083	180894103	G2958.1	miRNA,Mir124a-3,G2958.1,TAAGGCACGCGGTGAATGCCA,11,180894103,0.5702197482094941,2,2,29,ENSEMBL	+
chr2	5379039	5379082	G2963.1	intron,Camk1d,G2963.1,ACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGACATT,112,5379039,0.752075122322466,6,9,690,HAVANA	-
chr2	5379179	5379209	G2963.2	intron,Camk1d,G2963.2,CCAAATGCCTCGTCATCTAATTAGTGACGCG,75,5379209,0.8597932285023234,3,3,310,HAVANA	-
chr2	5379246	5379367	G2964.1	intron,Camk1d,G2964.1,ACCAGGGGAATCCGACTGTTTAATTAAAACAAAGCTTCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCG,8898,5379252,0.9929752827587501,22,320,59205,HAVANA	-
chr2	9745253	9745273	G2969.1	repeat,AluJb,G2969.1,TATCTGCTCACAATGCCTCTA,5,9745268,0.7046736049978358,2,6,29,RepeatMasker	-
chr2	9915156	9915177	G2970.1	3'utr,Taf3,G2970.1,TATCACAAAACTTTATTATATT,7,9915167,0.7115617673047374,2,5,56,HAVANA	-
chr2	13672650	13672669	G2978.1	intron,St8sia6,G2978.1,TCGTTGTCGTCTTCTGCTTA,8,13672663,0.7145604659377985,3,11,69,HAVANA	-
chr2	15427861	15427881	G2981.1	NoAnnotation,,G2981.1,AAGGGTTGGTTTGAGCATTCA,104,15427881,0.5662692920477085,3,4,724,	-
chr2	19512411	19512434	G2984.1	intron,4921504E06Rik,G2984.1,ATTGAGTTGAACAAAGGAGGTCTA,13,19512411,0.9156050462633212,2,6,59,HAVANA	-
chr2	34747469	34747490	G3007.1	intron,Gapvd1,G3007.1,ATTACTAAATAATAACTATTAT,17,34747479,0.6741210475536906,3,5,140,HAVANA	-
chr2	35798764	35798786	G3009.1	intron,Ttll11,G3009.1,TAAATACTTTTATTATCTAAAAC,10,35798776,0.6358438008810895,3,6,94,HAVANA	-
chr1	100180172	100180240	G301.1	repeat,L2a,G301.1,TTGTTGCCACGGTAATCTTGCTCAGTACGAGAGGAATCGCAGGTTCAGACATTTGGTGTATGTGATTGG,1666,100180208,0.9993453295120847,11,1630,10598,RepeatMasker	-
chr2	37372715	37372739	G3012.1	3'utr,Rc3h2,G3012.1,TATTTAACCTTATCTTTTTAATTTT,10,37372715,0.7712455021209992,7,11,128,ENSEMBL	-
chr2	38237881	38237902	G3014.1	intron,Dennd1a,G3014.1,CATGATCAGATGGTGCTGGGCA,14,38237902,0.8376929766606798,2,28,42,HAVANA	-
chr2	38642179	38642210	G3015.1	coding,Psmb7,G3015.1,TTCAAAAATTCACTTCATATCTCCTAATATTT,8,38642210,0.7636304003629346,3,3,90,HAVANA	-
chr2	42081855	42081875	G3019.1	repeat,MIRb,G3019.1,ATTTAACTGTGATAAACTTTA,12,42081855,0.820981641137362,2,7,100,RepeatMasker	-
chr2	43403425	43403445	G3020.1	repeat,AluSc5,G3020.1,ATTTGGTATCTGTGCTTACTT,6,43403433,0.751984417469264,2,7,56,RepeatMasker	-
chr2	44987549	44987579	G3023.1	3'utr,Zeb2,G3023.1,CTCATTTTATATTTCCTAATTTTATTTATTT,19,44987559,0.6638348518772399,10,24,282,HAVANA	-
chr2	44987583	44987603	G3024.1	3'utr,Zeb2,G3024.1,TCAAATAACATTTTATTTATG,8,44987598,0.6585865133840699,4,7,73,HAVANA	-
chr2	45848514	45848536	G3026.1	repeat,LTR33,G3026.1,AAATTCATATTATTATTATTATT,19,45848521,0.6977060199351935,3,10,214,RepeatMasker	-
chr1	100180350	100180395	G303.1	repeat,L2a,G303.1,TCATAGCGATGTTGCTTTTTGATCCTTTGATGTCAGCTCTTCCTAT,39,100180389,0.8854915278941389,4,38,354,RepeatMasker	-
chr2	48640046	48640068	G3031.1	NoAnnotation,,G3031.1,GATCAGATACTGTCTTAGTCTTG,14,48640059,0.7561565459223641,2,17,106,	-
chr2	72936881	72936906	G3051.1	3'utr,Sp3,G3051.1,TATTTTCTTTTTATTTTTTAATTATT,7,72936897,0.5860686618490976,4,4,131,HAVANA	-
chr2	72938042	72938068	G3052.1	stop_codon,Sp3,G3052.1,TAAATATTACACAAATACTTATTCATT,5,72938052,0.7582621016457446,3,6,41,HAVANA	-
chr2	73012738	73012769	G3053.1	repeat,THE1A-int,G3053.1,CTAGCAGCCGACTTAGAACTGGTGCGGACCAG,339,73012738,0.7156237241202487,3,9,1481,RepeatMasker	-
chr2	73012882	73012922	G3054.1	repeat,THE1A-int,G3054.1,CGGTGGCGACTCTGGACGCGAGCTGGGCCCTTCCCATGGAT,177,73012901,0.9835307723998211,3,192,450,RepeatMasker	-
chr1	102628205	102628234	G306.1	NoAnnotation,,G306.1,GCGAAGCTACCATCTGTGGGATTATGACTA,342,102628214,0.5987312012100514,6,27,2164,	-
chr1	102628253	102628327	G306.2	NoAnnotation,,G306.2,ATGATGTGTTGTTGCCATGGTAATCCTGCTCAGTATGAGAGGAACCGCAGGTTCAGACATTTGCTGTATGTGCTT,3561,102628288,0.9759247831182681,24,317,27761,	-
chr2	90395128	90395172	G3076.1	repeat,L1MEg,G3076.1,GACCCGCTCCGGGGACAGTGCCAGGTGGGGAGTTTGACTGGGCAT,510,90395128,0.8962621365833013,5,6,1508,RepeatMasker	-
chr1	104986060	104986086	G308.1	repeat,L1MEc,G308.1,CTTCTCTCTTATTATTTATTTATTTAT,8,104986067,0.713128214118929,4,5,128,RepeatMasker	-
chr2	102829370	102829460	G3086.1	intron,Cd44,G3086.1,TGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCAGTATGAGAGGAACCGCAGGTTCAGACATTTGTA,1663,102829394,0.932512493484785,25,187,14250,HAVANA	-
chr2	119741491	119741517	G3106.1	NoAnnotation,,G3106.1,GAGTGCGTAGCTCAGCGGTAGAGCACT,17,119741517,0.938618173048075,2,15,57,	-
chr2	122377413	122377433	G3113.1	NoAnnotation,,G3113.1,CCGTGATCGTATAGTGGTTAG,16,122377428,0.6528973705330938,2,2,110,	-
chr2	130706289	130706313	G3118.1	3'utr,4930402H24Rik,G3118.1,CCTTCAATTTATTTTTATATTATTT,7,130706296,0.5904993861388341,5,6,94,HAVANA	-
chr2	140623271	140623293	G3123.1	repeat,LTR8,G3123.1,AAACTAATCAGGATTCTCTCTGT,6,140623286,0.6922256221782052,2,8,33,RepeatMasker	-
chr2	140659512	140659543	G3124.1	3'utr,Flrt3,G3124.1,AACACAATTCTATATTTTAGTATTTTTTAGTA,11,140659527,0.6723994461018632,3,11,128,HAVANA	-
chr2	149799025	149799046	G3131.1	NoAnnotation,,G3131.1,ATTTCACTTTTTCTATTTATTT,14,149799025,0.9158698801037304,2,19,182,	-
chr1	110489029	110489051	G314.1	NoAnnotation,,G314.1,CTTAAATAATTTTATTAATATTT,7,110489040,0.6837164298497932,2,5,82,	-
chr2	161430946	161430968	G3142.1	NoAnnotation,,G3142.1,TTTTTGACATTATTGTTACTATT,35,161430946,0.9249809782501018,2,31,410,	-
chr2	168181082	168181106	G3147.1	3'utr,Adnp,G3147.1,ATTCATTTATACCATCTAATATATG,20,168181086,0.7205995380113352,9,24,174,HAVANA	-
chr2	174283458	174283480	G3152.1	antisense,Nespos,G3152.1,AAAGGGGTCTTGAGGGGTTAATA,43,174283458,0.7760332249031585,2,7,210,HAVANA	-
chr3	4339091	4339117	G3157.1	rRNA,n-R5s194,G3157.1,CCTGGGAATACCGGGTGCTGTAGGCTA,283,4339102,0.5580163206162452,4,4,1493,ENSEMBL	+
chr3	5860354	5860448	G3158.1	NoAnnotation,,G3158.1,GCGGGTGTTGACGCGATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAAACGGCGGGAGTAACTATGA,8367,5860418,0.9744134528964035,17,330,47800,	+
chr3	5860458	5860550	G3158.2	NoAnnotation,,G3158.2,GGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATGAACGAGATTCCCACTGTCCCTACCTACTATCCAGCGAAACCACAG,1556,5860550,0.935125020133504,13,37,8322,	+
chr3	5860558	5860577	G3158.3	NoAnnotation,,G3158.3,AACGGGCTTGGCGGAATCAG,87,5860558,0.878831244916325,2,5,169,	+
chr3	5860590	5860662	G3158.4	NoAnnotation,,G3158.4,ACCCTGTTGAGCTTGACTCTAGTCTGGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCG,4455,5860662,0.8286222748566787,12,122,19254,	+
chr3	5860709	5860763	G3159.1	NoAnnotation,,G3159.1,CGGGCCGCCGGTGAAATACCACTACTCTCATCGTTTTTTCACTGACCCGGTGAGG,882,5860709,0.9008248325215683,11,38,6966,	+
chr1	113903986	113904039	G316.1	lincRNA_intron,9330185C12Rik,G316.1,ACTCTAGTCTGGTATGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCC,54,113904024,0.943534329553461,3,13,194,ENSEMBL	-
chr1	113904114	113904151	G316.2	lincRNA_intron,9330185C12Rik,G316.2,CATGAATGGATGAACGAGATTCCCACTGTCCCTACCTA,124,113904122,0.6219419055333976,6,11,601,ENSEMBL	-
chr3	9282498	9282522	G3164.1	NoAnnotation,,G3164.1,TATATTTTCCTATTTTATATCAAGT,8,9282522,0.9113124430090507,3,8,96,	+
chr1	113904198	113904224	G317.1	lincRNA_intron,9330185C12Rik,G317.1,CGCTGGTAAACGGCGGGAGTAACTATG,26,113904215,0.9251448061970857,2,4,76,ENSEMBL	-
chr3	16111055	16111077	G3170.1	NoAnnotation,,G3170.1,GAATGTTTTCATTAATCAAGAAC,9,16111055,0.8064571938634003,2,4,68,	+
chr3	17795723	17795743	G3171.1	miRNA,Mir124a-2,G3171.1,TAAGGCACGCGGTGAATGCCA,30,17795732,0.6403271757182886,2,4,83,ENSEMBL	+
chr3	27013367	27013388	G3177.1	NoAnnotation,,G3177.1,ATAAATTATATATTTTCCTTCC,6,27013367,0.7616977979889631,4,4,62,	+
chr1	113904243	113904281	G318.1	lincRNA_intron,9330185C12Rik,G318.1,ACACAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAG,168,113904263,0.7086752685561428,4,10,1254,ENSEMBL	-
chr3	30397582	30397603	G3181.1	NoAnnotation,,G3181.1,TATTCCTAAATGAATACTATTT,6,30397596,0.7319892198374395,2,2,54,	+
chr3	37481379	37481407	G3189.1	intron,Spata5,G3189.1,CGAGGTGGGATCCCGAGGCCTCTCCAGTC,2367,37481379,0.7772924822703755,4,65,9400,HAVANA	+
chr3	45182482	45182507	G3200.1	repeat,AluSz,G3200.1,TCCATATATATCATTTTCTATATATT,25,45182507,0.6558676784601204,5,5,308,RepeatMasker	+
chr3	48333687	48333708	G3204.1	NoAnnotation,,G3204.1,TTGGTTCAAAGTGTTGGTAGCA,59,48333687,0.8413470162432012,2,60,408,	+
chr3	48954823	48954843	G3205.1	snRNA,Gm23511,G3205.1,AAATGTGGGAAACTCGACTGC,56,48954823,0.7015136901695456,2,3,212,ENSEMBL	+
chr3	61178852	61178875	G3217.1	NoAnnotation,,G3217.1,TCTTCCTTTATTTATTTATTCATT,5,61178875,0.804255036437468,2,3,66,	+
chr3	62159053	62159081	G3219.1	NoAnnotation,,G3219.1,CTCGGGCCTTCCCGGAGTTGGGTTGCTTG,5,62159053,0.9992159219560927,2,5,33,	+
chr3	62159105	62159130	G3219.2	NoAnnotation,,G3219.2,TAAACTCCATCTAAGGCTAAATACCG,187,62159105,0.5779444915912813,5,11,1019,	+
chr3	62159162	62159185	G3220.1	NoAnnotation,,G3220.1,GGGAAAGTTGAAAAGAACTTTGAA,36,62159162,0.8594136524552168,3,3,128,	+
chr3	67432929	67432949	G3227.1	intron,Gfm1,G3227.1,TGTTGGCACTCGAAGATACTG,33,67432949,0.7719112840023357,2,24,174,HAVANA	+
chr3	69009918	69009939	G3228.1	miRNA,Mir16-2,G3228.1,TAGCAGCACGTAAATATTGGCG,21,69009932,0.5964909277892042,2,3,101,ENSEMBL	+
chr3	86800098	86800118	G3241.1	NoAnnotation,,G3241.1,TGAGTCCATTTGAACGCACCA,27,86800098,0.9364615832527493,2,21,107,	+
chr3	87539645	87539668	G3242.1	3'utr,Etv3,G3242.1,TTTTTTATTTATTCCATAATTATG,28,87539664,0.7230467194653968,10,31,371,HAVANA	+
chr3	88539156	88539184	G3245.1	NoAnnotation,,G3245.1,CAGTTCTTTATAATTTAATATTCTATTTT,11,88539168,0.5939418698900021,9,10,148,	+
chr3	88906609	88906634	G3248.1	rRNA,n-R5s197,G3248.1,AATACTGGGTGCTGTAGGCTTTTTTT,14,88906614,0.7905265584877653,3,4,113,ENSEMBL	+
chr3	88911289	88911311	G3249.1	repeat,(CA)n,G3249.1,CATAATGTAGGGAAGGGAAGTTG,46,88911311,0.8185843537273096,2,48,139,RepeatMasker	+
chr3	90264071	90264095	G3253.1	3'utr,Crtc2,G3253.1,ATATTATTTTTTATTAAATATATTA,8,90264072,0.726000884757322,5,16,104,HAVANA	+
chr3	96346675	96346707	G3261.1	repeat,L1M4b,G3261.1,TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGCT,40,96346706,0.7398427344077401,3,3,291,RepeatMasker	+
chr3	96410069	96410098	G3264.1	NoAnnotation,,G3264.1,GCCGTGATCGTATAGTGGTTAGTACTCTGC,61,96410075,0.6383650949178611,2,2,591,	+
chr3	96452495	96452527	G3267.1	NoAnnotation,,G3267.1,GCCGTGATCGTATAGTGGTTAGTACTCTGCGTT,89,96452511,0.6515113701082069,3,3,927,	+
chr3	97158085	97158117	G3269.1	NoAnnotation,,G3269.1,TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT,330,97158117,0.9225537476012549,8,24,3158,	+
chr3	114251422	114251443	G3284.1	repeat,L1PA7,G3284.1,AATTTATTCTTCAATTATTATC,5,114251430,0.6737764793585103,3,3,51,RepeatMasker	+
chr3	117282070	117282091	G3288.1	NoAnnotation,,G3288.1,CTGAATCCTGTACGACCCACCA,102,117282091,0.9393593996019838,4,178,208,	+
chr1	122357210	122357241	G329.1	NoAnnotation,,G329.1,CTTGGGTCTTCCCGGAGTCGGGTTGCTTGGGA,446,122357241,0.9829462092794148,3,606,3019,	-
chr3	124386262	124386289	G3297.1	NoAnnotation,,G3297.1,TATTTTTTATTTACATTTTATATTTTTG,14,124386278,0.636200053792086,9,15,229,	+
chr3	128712958	128712986	G3298.1	NoAnnotation,,G3298.1,TGTGGCTGTAGCTCAGTTGGTAGAGTTCC,86,128712986,0.9646395170285272,3,31,683,	+
chr3	129219394	129219414	G3299.1	3'utr,Pitx2,G3299.1,TTTCTAACATATTATTATTAT,5,129219414,0.7243782505415006,3,4,56,HAVANA	+
chr3	129635376	129635400	G3300.1	3'utr,Elovl6,G3300.1,AATTATTTTTATATTATTTTAGCTT,10,129635400,0.7415344161526316,4,12,138,ENSEMBL	+
chr3	132206641	132206666	G3304.1	NoAnnotation,,G3304.1,TATATACATATATATATTTTTTAATT,33,132206662,0.70972567356268,2,24,403,	+
chr3	136426701	136426726	G3309.1	NoAnnotation,,G3309.1,TCACTGCTGGTTGGCTACGTTTGGCT,66,136426725,0.8220392850227068,2,66,475,	+
chr3	144720549	144720568	G3313.1	NoAnnotation,,G3313.1,ACTGGGTGGAGCCGCTGCAG,8,144720567,0.9930899289533524,2,16,8,	+
chr3	144950402	144950424	G3314.1	repeat,AluSq2,G3314.1,ATCCTCTTTAATAAATATTTATT,9,144950424,0.7941505756153802,3,5,101,RepeatMasker	+
chr3	147795290	147795309	G3318.1	NoAnnotation,,G3318.1,GGGGACTCATAGGAGATTGT,5,147795309,0.7928933414756434,2,10,15,	+
chr3	150459277	150459296	G3324.1	NoAnnotation,,G3324.1,TATTTCTAAATTAATATCAT,27,150459277,0.6814287403904284,3,3,259,	+
chr3	152089563	152089585	G3326.1	NoAnnotation,,G3326.1,AATTTGATATTATTGTTATTATA,6,152089585,0.8010301580874969,3,10,68,	+
chr1	124618534	124618558	G333.1	NoAnnotation,,G333.1,TAATTGTCCTAAGGTAGCAAAATTT,5,124618558,0.8724240603199372,2,5,27,	-
chr3	154177870	154177891	G3331.1	intron,Slc44a5,G3331.1,TTATCTGCTCACACTTCCTCAA,19,154177876,0.7126412863578726,2,22,115,HAVANA	+
chr3	3100266	3100290	G3335.1	NoAnnotation,,G3335.1,GCCCAGCTAGCTCAGTTGGTAGAGC,36,3100290,0.8249441126743023,2,2,177,	-
chr3	3580556	3580578	G3336.1	NoAnnotation,,G3336.1,ATATATATATATTTTTTAATTCG,11,3580578,0.855469652450984,3,14,129,	-
chr3	11904655	11904681	G3340.1	repeat,L1PA6,G3340.1,GTTCTATTTTGTTGGTTTTCGGAACTG,99,11904681,0.6974984132027278,5,8,1348,RepeatMasker	-
chr3	19627963	19627989	G3348.1	NoAnnotation,,G3348.1,AAGATTGTAGGTTCGACTCCTACCTGG,7,19627986,0.7123225390951624,2,7,38,	-
chr3	23968379	23968399	G3352.1	NoAnnotation,,G3352.1,CTTTTTATTATTAACTTATTT,6,23968396,0.6781203651457197,2,2,77,	-
chr3	28721358	28721381	G3359.1	NoAnnotation,,G3359.1,TAGAGAGAACTCGGGTTAAGGAAT,94,28721358,0.9788688694504184,2,32,283,	-
chr3	38450819	38450840	G3368.1	NoAnnotation,,G3368.1,AATTCTTGTCCCTATGGGACAT,5,38450819,0.8728872855834952,3,5,32,	-
chr3	39635962	39635983	G3370.1	rRNA,n-R5s195,G3370.1,AATACCGGGTGCTGTAGGCTAA,37,39635962,0.6264640775309755,4,6,179,ENSEMBL	-
chr3	46448013	46448033	G3374.1	NoAnnotation,,G3374.1,CGCGGGGGGGAGCAGTCTGGT,91,46448033,0.9165558194728279,3,56,186,	-
chr3	47494439	47494460	G3376.1	NoAnnotation,,G3376.1,CTCATGAAGTTGGAGTGGCTAG,5,47494450,0.7031882265379794,2,5,24,	-
chr3	51402594	51402619	G3379.1	repeat,L1PA5,G3379.1,TATTTTTTATTTACATTTTATATTTG,11,51402594,0.8111796697245264,5,11,170,RepeatMasker	-
chr3	51963578	51963598	G3380.1	intron,Maml3,G3380.1,GCTTGGTGGGGCTTCCTCTGT,34,51963578,0.8757942010642984,2,8,237,HAVANA	-
chr3	54586695	54586715	G3387.1	NoAnnotation,,G3387.1,GTGGGTAGGGGAATCTCATAT,12,54586695,0.7734934844755773,2,11,57,	-
chr1	40391473	40391494	G34.1	NoAnnotation,,G34.1,CTTGGACGAAGACTGATGCTCA,8,40391489,0.6192690348733181,2,12,24,	+
chr3	77105334	77105353	G3400.1	NoAnnotation,,G3400.1,ATAGGCCATGTGAAGTGAAC,6,77105334,0.990351725131902,2,11,13,	-
chr3	79406540	79406559	G3401.1	NoAnnotation,,G3401.1,GGTTCGAGTCCTGTTCACTC,7,79406546,0.7199364642278606,2,14,35,	-
chr3	83124144	83124193	G3406.1	NoAnnotation,,G3406.1,TGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCCAGGCGGAACG,227,83124181,0.7782458271033743,5,10,747,	-
chr3	91380653	91380678	G3411.1	NoAnnotation,,G3411.1,GAAAACTGGACATGGTACTCCAGGAA,32,91380678,0.8794908161390824,2,54,74,	-
chr3	95058759	95058788	G3414.1	3'utr,Pip5k1a,G3414.1,CTATTTTTTTTTCATAATTTACTATTTATG,167,95058778,0.6327237057182389,17,183,2568,HAVANA	-
chr3	96387447	96387476	G3416.1	lincRNA_intron,Gm17575,G3416.1,TCCCTGGTGGTCTAGTGGCTAGGATTCGGC,13,96387447,0.7667058849543033,3,4,100,ENSEMBL	-
chr3	96458110	96458138	G3417.1	NoAnnotation,,G3417.1,GTGATCGTATAGTGGTTAGTACTCTGCGT,29,96458135,0.7485460525769924,2,3,293,	-
chr3	96500407	96500430	G3420.1	NoAnnotation,,G3420.1,TCGTATAGTGGTTAGTACTCTGCG,12,96500410,0.6994829961347694,2,2,99,	-
chr3	96501487	96501518	G3422.1	repeat,HAL1,G3422.1,TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGC,10,96501516,0.8646212277266014,3,6,76,RepeatMasker	-
chr3	97617649	97617671	G3423.1	NoAnnotation,,G3423.1,CGTGGGCACTTGAAGATAAGTAA,14,97617661,0.7495515950304806,2,15,55,	-
chr3	104438136	104438157	G3428.1	NoAnnotation,,G3428.1,GGGCCTGTAGCTCAGTGGATAG,6,104438142,0.6953587535175668,2,4,26,	-
chr3	108066333	108066357	G3431.1	repeat,L2,G3431.1,TTCAATTTTTATTTTTATTTTTTTT,5,108066344,0.6946060316068022,2,3,95,RepeatMasker	-
chr3	108202257	108202282	G3432.1	3'utr,Atxn7l2,G3432.1,CTTTTTATAACTTTATATTATTTTTT,5,108202273,0.7189953578839394,3,6,65,HAVANA	-
chr3	108903595	108903616	G3433.1	3'utr,Prpf38b,G3433.1,TATAAGGCAATAAACTGCCACT,6,108903607,0.7722004759013888,3,6,19,HAVANA	-
chr3	109397108	109397130	G3434.1	NoAnnotation,,G3434.1,TACATATATATATTTTTTAATTT,44,109397113,0.7071217504239393,4,38,566,	-
chr3	118777727	118777746	G3443.1	NoAnnotation,,G3443.1,GTGGACTGCTTGGTTGGGCT,18,118777746,0.6713294919815518,2,2,120,	-
chr3	121249811	121249839	G3444.1	intron,Tmem56,G3444.1,AACGGGCTTGGCGGAATCAGCGGGGAACG,515,121249811,0.9137586609260981,3,16,1498,HAVANA	-
chr3	121249911	121249942	G3444.2	intron,Tmem56,G3444.2,TAAGGTAGCCAAATGCCTCGTCATCTAATTAG,71,121249942,0.9666897545487111,4,4,460,HAVANA	-
chr3	133463684	133463712	G3457.1	3'utr,Tet2,G3457.1,TTTTTAATAAAATTTATATTTATTTAATG,5,133463707,0.6310419713096705,4,4,71,ENSEMBL	-
chr1	144001009	144001031	G346.1	3'utr,Rgs2,G346.1,AATACTTTTAATAAATTTATTTT,5,144001016,0.7503904316860116,2,4,57,HAVANA	-
chr3	138108655	138108677	G3460.1	intron,Mttp,G3460.1,GTAGTTCAGCTGGTTAGAATGTG,9,138108667,0.7321970361548293,2,3,59,ENSEMBL	-
chr3	145661898	145661924	G3465.1	NoAnnotation,,G3465.1,GGTGCTGTAGTTCAGTTGGTAGAGCGC,5,145661908,0.6962716860275865,2,5,31,	-
chr3	148816010	148816035	G3469.1	3'utr,Lphn2,G3469.1,GCTATATTTAGTAATTAATTTATTTT,9,148816027,0.7034997991260626,4,9,111,ENSEMBL	-
chr3	152994810	152994833	G3473.1	NoAnnotation,,G3473.1,AAAAATATTCTAACTTTTAAATTT,7,152994819,0.6674332277345199,3,5,70,	-
chr4	10874064	10874086	G3487.1	repeat,THE1D,G3487.1,GTAGTCGTGGCCGAGTGGTTAAG,12,10874064,0.7637038812324426,2,3,69,RepeatMasker	+
chr1	146164563	146164586	G349.1	NoAnnotation,,G349.1,AACTAATTCTAATTTTTAATTATT,7,146164568,0.6697056163656242,3,4,86,	-
chr4	14996238	14996261	G3493.1	NoAnnotation,,G3493.1,CTTCCTAACACTTATTAATTTATG,12,14996238,0.8202619399392285,4,6,119,	+
chr4	22588498	22588520	G3500.1	NoAnnotation,,G3500.1,TCAGCAACGGATATCTTGGTTCT,19,22588518,0.7081215944707329,2,19,108,	+
chr4	33170814	33170840	G3514.1	repeat,L1MD1,G3514.1,TTCTTTTATATATATTTATATATATAT,8,33170827,0.6547092195679609,4,6,122,RepeatMasker	+
chr4	53860741	53860772	G3530.1	rRNA,n-R5s185,G3530.1,ACCGCCTGGGAATACCGGGTGCTGTAGGCTTG,41,53860754,0.7029471334661908,3,5,254,ENSEMBL	+
chr4	55518339	55518358	G3536.1	NoAnnotation,,G3536.1,CAAACTGGAGGAATGTGGGG,8,55518340,0.9979106118717103,2,9,15,	+
chr4	58417867	58417886	G3540.1	NoAnnotation,,G3540.1,CTTATATACTATTTATATTT,12,58417878,0.652281913051806,3,4,140,	+
chr4	58950869	58950890	G3542.1	NoAnnotation,,G3542.1,ATGATTTAGATTCTGTCGTACA,39,58950869,0.7421547885587786,2,2,341,	+
chr4	67266729	67266751	G3546.1	NoAnnotation,,G3546.1,TACCTCTAAATTAACATTATTCT,8,67266751,0.7187987616469741,2,2,70,	+
chr4	75439569	75439599	G3553.1	NoAnnotation,,G3553.1,TGATGATGATGATGATGATGATGATGGACTA,9,75439599,0.9827448506648215,2,9,67,	+
chr4	78773716	78773741	G3557.1	NoAnnotation,,G3557.1,ATAGCTCTTTCTCGATTCCGTGGTTG,71,78773741,0.9145210736578615,5,7,615,	+
chr4	78773883	78773923	G3558.1	NoAnnotation,,G3558.1,GCAATAACAGGTCTGTGATGCCCTTAGATGTCCAGGGCTGC,462,78773923,0.9908547872038098,7,54,3014,	+
chr4	78773996	78774016	G3559.1	NoAnnotation,,G3559.1,CATTCGTGATGGGGATCGGGG,15,78774001,0.6681682584620942,2,2,63,	+
chr4	78774062	78774115	G3560.1	NoAnnotation,,G3560.1,TCATAAGCTTGCATTGATTAAGTCCCTGCCCTTTGTACACACTGCCCGTCACTA,113,78774106,0.9593569092219734,5,10,908,	+
chr4	102054407	102054426	G3578.1	repeat,L1PA7,G3578.1,TGTGGAAGCTGCCTGGAAAA,144,102054426,0.6157997285969299,2,3,573,RepeatMasker	+
chr4	117202552	117202574	G3584.1	snRNA,Gm23143,G3584.1,TATAAATCTTTCGCCTTTTACTA,16,117202560,0.6447144984989714,3,5,122,ENSEMBL	+
chr4	117210844	117210889	G3585.1	snRNA,Gm23287,G3585.1,ATACTCTGGTTTCTCTTCAGATCGTATAAATCTTTCGCCTTTTACT,15,117210844,0.9974403001190013,3,7,133,ENSEMBL	+
chr4	127773920	127773939	G3596.1	repeat,AluSx4,G3596.1,CTCTCAGGTTCTAGCATGGT,5,127773939,0.9931893575861198,2,10,25,RepeatMasker	+
chr4	129273227	129273247	G3599.1	repeat,MER4D1,G3599.1,TAATTCAGTATGGTCTACTGT,11,129273234,0.7801162214093421,2,18,77,RepeatMasker	+
chr4	129488314	129488339	G3600.1	3'utr,Bsdc1,G3600.1,CAATATTATATATTTTAAATTATAAT,7,129488331,0.6018124890705064,5,7,77,HAVANA	+
chr4	139338138	139338198	G3620.1	NoAnnotation,,G3620.1,TCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCTCGGCG,3874,139338198,0.9950084423145816,11,348,29418,	+
chr4	139338224	139338252	G3621.1	miRNA,Gm25732,G3621.1,CCTCGGTTGGCCTCTGATAGCCGGGTCCC,319,139338252,0.9988056163334955,4,11,1903,ENSEMBL	+
chr4	139338304	139338365	G3622.1	miRNA,Gm24245,G3622.1,CGTCGGGACCGGGGTCCGGTGCGGAGAGCCGTTCGTCTTGGGAAACGGGGTGCGGCCGGAAA,53,139338304,0.999756196075993,6,48,92,ENSEMBL	+
chr4	139338422	139338444	G3623.1	NoAnnotation,,G3623.1,CTAAACCATTCGTAGACGACCTG,17,139338444,0.6704374211061657,3,3,73,	+
chr4	139950901	139950931	G3625.1	NoAnnotation,,G3625.1,TTCTCTCTCTCTCTCTCTCCCCCCCTCCCCG,30,139950901,0.9450580853632297,3,24,227,	+
chr1	154918946	154918965	G363.1	NoAnnotation,,G363.1,AAGTCCCCCCTTGGATACCA,5,154918946,0.968983563813246,2,10,10,	-
chr4	151592493	151592528	G3634.1	NoAnnotation,,G3634.1,ATGATGATGATGATGATGATGATGATGATGGCCTAG,578,151592528,0.9879448784732786,7,557,4688,	+
chr1	160102143	160102169	G366.1	intron,Tnn,G366.1,GTGGGCATAGCTCAGTTGGTAGAGTGC,6,160102143,0.9810172726711178,2,6,33,HAVANA	-
chr4	26340903	26340923	G3660.1	coding,Manea,G3660.1,CACTTTTTATTCTATTTATTT,6,26340923,0.7034838561848732,2,3,79,HAVANA	-
chr4	27943707	27943729	G3663.1	NoAnnotation,,G3663.1,ACAGTAGGGAACTGCCAGGTATG,132,27943711,0.7922525158384967,2,131,396,	-
chr4	38977628	38977649	G3670.1	NoAnnotation,,G3670.1,AGGGTTGTAGCTCAGTTGGTTA,11,38977646,0.7617971728077845,2,10,78,	-
chr4	41239957	41239978	G3674.1	intron,Ubap2,G3674.1,GCCTTTGTAGCTTGATTGGCTT,12,41239978,0.7534362937032608,2,24,90,HAVANA	-
chr4	45303396	45303416	G3677.1	NoAnnotation,,G3677.1,CAAATATGTATCTGCTTATGA,17,45303402,0.7102680426227916,2,34,102,	-
chr4	45346637	45346671	G3678.1	NoAnnotation,,G3678.1,GTGGAGAAATTCAATGAAGCGCGGGTAAACGGCGG,85,45346654,0.9385602961871491,3,18,204,	-
chr4	47711858	47711878	G3679.1	repeat,MER45R,G3679.1,GCGGGTCTAGCTCAGTTGGTA,14,47711878,0.7351466371964768,2,2,82,RepeatMasker	-
chr4	55689210	55689233	G3688.1	repeat,L1MC1,G3688.1,TTAATTTTAAGAAGGAAATATATA,15,55689229,0.6693751115414511,2,16,119,RepeatMasker	-
chr4	58274822	58274845	G3692.1	NoAnnotation,,G3692.1,TTTGCAATTTAACTGTGAGAAATA,7,58274845,0.8390022668640621,2,3,52,	-
chr4	58950870	58950892	G3693.1	NoAnnotation,,G3693.1,TCTGTACGACAGAATCTAAATCA,643,58950886,0.7234449321987909,5,39,3148,	-
chr4	59475852	59475874	G3694.1	3'utr,Ptbp3,G3694.1,TATTTACTTAATTTCTTATTATG,6,59475856,0.5535917677186832,3,3,77,HAVANA	-
chr4	69980131	69980155	G3701.1	repeat,LTR12C,G3701.1,ATTGCTGAGATAGGTGCCTCACTGG,87,69980155,0.8707828956377878,3,44,470,RepeatMasker	-
chr4	72028011	72028040	G3704.1	repeat,MIRb,G3704.1,ATTTCCACTGTCCCTACCTACTATCCAGTG,8,72028011,0.6827508180816437,2,3,63,RepeatMasker	-
chr4	72028099	72028140	G3705.1	NoAnnotation,,G3705.1,TGAAGAAATTCAATGAAGCGCGGGTAAACGGCGGGAGTAACT,301,72028125,0.9466152008700306,4,28,883,	-
chr4	72394323	72394345	G3707.1	NoAnnotation,,G3707.1,CATTTAATAATTTCTATTTATTC,6,72394343,0.6737731389590487,4,4,74,	-
chr4	72661595	72661624	G3708.1	repeat,L1PA6,G3708.1,CATACCTATTTATTTATTTATTTATTTATT,5,72661603,0.7407887199105894,2,2,85,RepeatMasker	-
chr1	167340295	167340323	G371.1	NoAnnotation,,G371.1,TGTGGAACCTGGCGCTAAACCATTCGTAG,314,167340297,0.6190670438624726,2,4,1469,	-
chr4	78103789	78103813	G3713.1	processed_transcript,Ptprd,G3713.1,GATATGGCTGCTGCTGTGATATTCA,238,78103805,0.8078228679493006,6,242,1433,HAVANA	-
chr4	80586364	80586386	G3715.1	NoAnnotation,,G3715.1,TAACTAACCTGGATTCCCTCAGA,95,80586386,0.8367110479588071,2,24,481,	-
chr4	82292637	82292659	G3719.1	3'utr,Nfib,G3719.1,CTAACTTTTTAACAATTATAATG,5,82292644,0.573428176567168,3,5,44,ENSEMBL	-
chr4	82294964	82294988	G3720.1	3'utr,Nfib,G3720.1,TTTTTCATCTTCCAATTAATATTTG,7,82294969,0.6028743516171546,5,6,82,ENSEMBL	-
chr4	82619665	82619692	G3722.1	NoAnnotation,,G3722.1,CGTGATCGTATAGTGGTTAGTACTCTGC,16,82619679,0.605997541140246,4,4,152,	-
chr1	167340364	167340390	G373.1	miRNA,Gm25911,G373.1,TCTTGGGAAACGGGGTGCGGCCGGAAA,28,167340364,0.6026423685875651,2,29,67,ENSEMBL	-
chr4	109453681	109453705	G3739.1	3'utr,Rnf11,G3739.1,TATTATTATCGTTGGGGCTGGCTCT,7,109453692,0.7574370500394735,4,9,57,HAVANA	-
chr4	117155189	117155216	G3747.1	snoRNA,Gm26330,G3747.1,CAAGGACTTGTCATAGTTACACTGACTG,122,117155189,0.6224043177374577,6,13,948,ENSEMBL	-
chr1	168395217	168395239	G375.1	intron,Pbx1,G375.1,TTATTATTACTTACTATTATTAT,12,168395237,0.7985427515097144,2,13,139,HAVANA	-
chr4	124867424	124867443	G3762.1	repeat,L1MEd,G3762.1,CCTTAATACTTTCTTATTTT,17,124867443,0.7266172170140435,2,2,201,RepeatMasker	-
chr1	171064192	171064235	G378.1	repeat,L1PB3,G378.1,TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGC,40,171064192,0.9393597320267708,7,10,349,RepeatMasker	-
chr4	141467963	141467989	G3785.1	3'utr,Spen,G3785.1,TGACTTCCTAACACTTATTAATTTATG,7,141467986,0.7208448336846672,4,5,71,HAVANA	-
chr4	155074381	155074408	G3799.1	3'utr,Rer1,G3799.1,AATTATAAATATATATTATATTTTAATT,5,155074381,0.6684549783309994,5,6,61,HAVANA	-
chr5	10058914	10058936	G3813.1	NoAnnotation,,G3813.1,TATATTTACATTTTTTCTTTCCT,7,10058918,0.6391646425641839,4,13,92,	+
chr5	12719910	12719943	G3816.1	repeat,L1M5,G3816.1,ACTTTGAAAAAATTAGAGTGTTCAAAGCAAGCCC,35,12719943,0.7447504904737541,2,28,154,RepeatMasker	+
chr5	27952346	27952370	G3830.1	NoAnnotation,,G3830.1,TGAGGGAATGAGCTGTGGATAGGGG,81,27952346,0.7381524470557845,3,4,321,	+
chr5	30888140	30888173	G3834.1	NoAnnotation,,G3834.1,TTAGGTCGCTGGTTCGATTCCGGCTCGAAGGACT,25,30888173,0.9977494107419713,4,8,156,	+
chr5	43288572	43288595	G3844.1	3'utr,Cpeb2,G3844.1,ATCATATTTATTTTACTATTTTTG,5,43288583,0.7107490343722378,2,4,70,ENSEMBL	+
chr5	50330091	50330120	G3849.1	NoAnnotation,,G3849.1,AATTCATCTTATTTTATTTATTTATTTATT,8,50330110,0.7489219014996048,3,4,139,	+
chr5	59690070	59690090	G3854.1	NoAnnotation,,G3854.1,CTTATATTTCAAAACTATTTT,8,59690090,0.6350916149863107,4,5,81,	+
chr5	67224199	67224218	G3858.1	NoAnnotation,,G3858.1,ATAGGATCGGGTCGCTAACA,11,67224210,0.7525117579593259,2,10,34,	+
chr1	177072233	177072257	G386.1	intron,Akt3,G386.1,CCTATATTCTTATACAATCTAAGAT,375,177072249,0.5473557117239354,9,84,3409,ENSEMBL	-
chr5	71726440	71726459	G3864.1	intron,Gabrb1,G3864.1,CTATTATTATTATATTACTA,5,71726454,0.7300169729121913,2,5,50,HAVANA	+
chr5	77656895	77656917	G3875.1	NoAnnotation,,G3875.1,TATTCATTCTTAATTTATGTAAG,10,77656909,0.7076801207814678,3,8,110,	+
chr5	82496206	82496230	G3881.1	NoAnnotation,,G3881.1,TTCTAACTTTTAATCTTTTATATTT,5,82496216,0.6167056131323848,3,4,67,	+
chr5	86829501	86829527	G3883.1	intron,Ythdc1,G3883.1,CTTTTAATTTACTTAGTATTATTTATT,8,86829513,0.8044980288445578,3,8,126,HAVANA	+
chr5	89536263	89536284	G3885.1	intron,Npffr2,G3885.1,TTCTGGGCTGTAGTGCGCTATG,13,89536263,0.7710637534376326,2,10,90,HAVANA	+
chr5	91145319	91145338	G3887.1	intron,Areg,G3887.1,TTTTAGGTCTCGGTAAATTA,27,91145333,0.6784129082143984,3,5,238,ENSEMBL	+
chr5	98275985	98276008	G3890.1	3'utr,Fgf5,G3890.1,CATATTTTCTTACTTTTATTATTT,6,98275992,0.6699014300840179,5,8,86,ENSEMBL	+
chr5	100996628	100996648	G3897.1	NoAnnotation,,G3897.1,ACTTTTATTACTATTTCTAGA,7,100996628,0.8042058819562482,2,2,75,	+
chr5	114851996	114852033	G3913.1	miRNA,mmu-mir-6240,G3913.1,GCGGGTGTTGACTCGATGTGATTTCTGCCCAGTGCTCT,276,114852007,0.8971472198197558,4,11,2283,ENSEMBL	+
chr5	115098226	115098259	G3916.1	3'utr,Sppl3,G3916.1,ACTACCTGTAAATACATTTTTCTATTTTATATTT,5,115098226,0.7019199670176626,4,5,71,HAVANA	+
chr5	115489523	115489543	G3919.1	snRNA,Gm24265,G3919.1,AAAACTTTTCCCAATACCCCG,37,115489529,0.5700134918359715,2,2,178,ENSEMBL	+
chr5	123373978	123374006	G3928.1	3'utr,Bcl7a,G3928.1,TATAATTTTTCACTTATTTATTCCATCGG,37,123374006,0.758238022118227,11,40,466,HAVANA	+
chr5	123482101	123482120	G3929.1	NoAnnotation,,G3929.1,CTGGTGTGTTCGCCATGGCC,6,123482120,0.9028342890170766,2,6,30,	+
chr5	124460933	124460953	G3930.1	3'utr,Setd8,G3930.1,CCTTATATTACCAAAACTTTT,7,124460950,0.6717526938297126,3,5,56,HAVANA	+
chr5	124576436	124576460	G3931.1	NoAnnotation,,G3931.1,ATGGGCGTAGCTCAGTGGTAGAGCA,5,124576436,0.7196569949160292,2,5,20,	+
chr5	128866069	128866089	G3937.1	repeat,L1ME2,G3937.1,TTACCCACCTGAGCCGTCTTG,18,128866078,0.9672882344239464,2,19,89,RepeatMasker	+
chr5	136932952	136932990	G3943.1	lincRNA_intron,4933404O12Rik,G3943.1,ACCCATATCCGCAGCAGGTCTCCAAGGTGAACAGCCTCT,699,136932981,0.6898361466651712,6,39,2497,ENSEMBL	+
chr5	137801529	137801550	G3945.1	intron,Zcwpw1,G3945.1,AGGTGATTGGCAGGCTAGAGTT,7,137801536,0.6746762018988656,2,9,29,HAVANA	+
chr5	138556702	138556723	G3946.1	NoAnnotation,,G3946.1,TAATGCAGTCAGGCACTGGTGA,5,138556702,0.950597365382163,2,10,12,	+
chr5	144141768	144141790	G3955.1	intron,Lmtk2,G3955.1,CTACTTTTTAAATCTTAATATTT,5,144141772,0.6977289911351037,2,5,60,HAVANA	+
chr5	144188151	144188174	G3956.1	3'utr,Lmtk2,G3956.1,TAATTTAAAAACTATTTAATATTC,9,144188166,0.6245845666037302,5,7,87,HAVANA	+
chr5	146261024	146261111	G3962.1	intron,Cdk8,G3962.1,TGGGGGGCCCAAGTCCTTCTGATCGAGGCCCAGCCCGTGGACGGTGTGAGGCTGGTCGCGGCCCCCGGCGCGCCGGGCTCGGCTCTTC,442,146261086,0.9999931622451391,7,26,2119,HAVANA	+
chr5	146261128	146261178	G3962.2	intron,Cdk8,G3962.2,TGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAATACCG,997,146261144,0.7643307327201904,5,21,3985,HAVANA	+
chr5	146261182	146261204	G3962.3	intron,Cdk8,G3962.3,CGAGACCGATAGTCAACAAGTAC,151,146261198,0.9061713518908874,2,6,125,HAVANA	+
chr5	146261236	146261309	G3962.4	intron,Cdk8,G3962.4,AGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACTGGTGGGGTCCGCGCAGTCCGCCCGGAGGATTCAACCCG,4626,146261248,0.6290159370456762,10,198,17836,HAVANA	+
chr5	146261337	146261361	G3963.1	intron,Cdk8,G3963.1,CCCGGCGGATCTTTCCCGCACCCTG,82,146261361,0.9996931030459442,2,59,327,HAVANA	+
chr5	149247972	149247995	G3970.1	repeat,MIRb,G3970.1,TTGCCCAGGCTGGAGTGCAGTGGC,12,149247993,0.7287070812957647,3,8,37,RepeatMasker	+
chr5	16675856	16675885	G3980.1	NoAnnotation,,G3980.1,CACCTAGCAGCTGACTTAGAACTGGTGCAG,19,16675875,0.8670603620000802,3,21,87,	-
chr5	17776725	17776784	G3982.1	NoAnnotation,,G3982.1,AACTGTTGCGGACCAGGGGAATCCGACTGTTTAATTAAAACAGAGCATCGTGGAGGCCCA,1516,17776725,0.9998239578184495,9,38,6259,	-
chr5	23770693	23770714	G3990.1	intron,Pus7,G3990.1,GTTGTTGTAGTATAGTGGTGTG,11,23770714,0.8099100114840582,2,12,92,HAVANA	-
chr5	24803429	24803459	G3991.1	3'utr,Rheb,G3991.1,CAATCATATTTTCAATTTATATATTGTATTT,42,24803459,0.630706829723816,12,45,471,HAVANA	-
chr5	25678149	25678176	G3994.1	NoAnnotation,,G3994.1,GGTGGATGTAGCTCAGTTGGTAGAGCAT,47,25678149,0.9548179124341956,2,3,319,	-
chr5	27975270	27975289	G3998.1	repeat,MLT1D,G3998.1,GGGTGCAAGTTTTTGATTGA,8,27975281,0.710761456363509,2,16,48,RepeatMasker	-
chr5	47620022	47620041	G4013.1	NoAnnotation,,G4013.1,TCTGGTTAATTCCGATAACG,8,47620039,0.6345460090288821,2,2,52,	-
chr5	50070633	50070655	G4016.1	repeat,SVA_A,G4016.1,TGATGATGATGATGATGAGCAAA,49,50070646,0.6198625465969226,2,3,287,RepeatMasker	-
chr5	50277331	50277350	G4018.1	NoAnnotation,,G4018.1,TGAAAGGAGGAACTATGTTA,13,50277331,0.7693128651498736,2,13,52,	-
chr5	53716854	53716875	G4020.1	repeat,SVA_C,G4020.1,ATATTATTACTTTTTAATTCTC,7,53716856,0.672988417369901,2,4,83,RepeatMasker	-
chr5	54418305	54418332	G4022.1	NoAnnotation,,G4022.1,CTCTTTTTATCTATTTATTTATTTATTT,5,54418312,0.6855602868764646,2,2,90,	-
chr5	76060238	76060263	G4038.1	repeat,L1M2,G4038.1,TTCCTTAGATTAGTAAATTATCATAC,6,76060256,0.7667433390237485,2,12,51,RepeatMasker	-
chr1	190118440	190118461	G405.1	3'utr,Prox1,G405.1,TTTAATTTATCCTAATTTATTT,8,190118447,0.6763001770361627,3,6,94,HAVANA	-
chr5	92415676	92415700	G4053.1	3'utr,Nup54,G4053.1,TATTTTTATATTATTTTACTTATTT,5,92415684,0.6862463874868214,4,5,78,HAVANA	-
chr1	190483061	190483082	G406.1	misc_RNA,Gm23153,G406.1,TTCTGGGCTGTAGTGCGCTATG,15,190483082,0.754723547828785,3,10,96,ENSEMBL	-
chr5	114852115	114852147	G4072.1	NoAnnotation,,G4072.1,TCTGGCACGGTGAAGAGACATGAGAGGTGTAGA,957,114852136,0.7070915355573474,5,40,3637,	-
chr5	114852228	114852250	G4073.1	NoAnnotation,,G4073.1,ATGAGATTCCCACTGTCCCTATC,55,114852250,0.94122976759631,2,13,325,	-
chr5	122457102	122457125	G4081.1	3'utr,Atp2a2,G4081.1,TTTAACTTAATCAATTAATTTTTT,6,122457113,0.6760418983243324,5,7,66,ENSEMBL	-
chr5	123302457	123302477	G4082.1	NoAnnotation,,G4082.1,GGATAACAATTACCCTGTAGA,13,123302464,0.596458219661513,2,2,63,	-
chr1	191170339	191170366	G409.1	3'utr,Atf3,G409.1,AAAATATTACTTATTTATCCCAGTATTC,13,191170343,0.7030843148514277,6,12,116,HAVANA	-
chr5	134650021	134650046	G4093.1	NoAnnotation,,G4093.1,TATAGTGGTCAGTATTCCCGCCTGTC,10,134650033,0.6759696703692338,2,2,73,	-
chr5	138165332	138165353	G4097.1	miRNA,Mir25,G4097.1,CATTGCACTTGTCTCGGTCTGA,23,138165337,0.5564953670438573,3,3,181,ENSEMBL	-
chr5	138165574	138165595	G4098.1	miRNA,Mir93,G4098.1,AAAGTGCTGTTCGTGCAGGTAG,56,138165574,0.6478864235386198,2,3,332,ENSEMBL	-
chr5	142725131	142725152	G4103.1	NoAnnotation,,G4103.1,TCAACTTTTTAATTATATATAT,6,142725139,0.6888113952066791,3,6,62,	-
chr1	192844596	192844615	G411.1	3'utr,Sertad4,G411.1,TCCTTTATTTTCAATATTTG,17,192844596,0.8473918007586351,2,2,187,HAVANA	-
chr5	149612831	149612851	G4112.1	repeat,MIRb,G4112.1,TGGTGCCTGCCTGCGTTAGTT,7,149612851,0.8624465287675362,2,10,37,RepeatMasker	-
chr6	3200796	3200832	G4115.1	NoAnnotation,,G4115.1,AACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGT,432,3200797,0.6756620081681282,7,26,2793,	+
chr6	3200882	3200930	G4115.2	NoAnnotation,,G4115.2,GAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCG,1913,3200921,0.6906066914505415,3,14,1714,	+
chr6	3200943	3200991	G4115.3	repeat,Charlie1,G4115.3,TCCCGACCCGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTG,863,3200963,0.7850899571371208,6,13,1928,RepeatMasker	+
chr6	3201012	3201142	G4115.4	repeat,MER58A,G4115.4,AGTCCACTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAG,2021,3201135,0.8511620990900968,27,124,11751,RepeatMasker	+
chr6	3201155	3201205	G4116.1	repeat,MER58A,G4116.1,CCGCCGCGAGGCGAGTCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCC,290,3201163,0.9985998454213779,4,61,481,RepeatMasker	+
chr6	3201442	3201485	G4116.2	repeat,Charlie1a,G4116.2,CGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAG,429,3201458,0.761690198742324,6,54,1100,RepeatMasker	+
chr6	3201508	3201550	G4116.3	repeat,Charlie1a,G4116.3,ATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGTGATG,952,3201544,0.9932043504894923,9,734,3830,RepeatMasker	+
chr6	3201615	3201653	G4117.1	repeat,AluJr,G4117.1,GGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGAC,327,3201628,0.8588458114237508,4,105,1247,RepeatMasker	+
chr6	10100371	10100402	G4124.1	NoAnnotation,,G4124.1,GTTTCTGTAGTGTAGTGGTTATCACGTTCGCC,33,10100371,0.8995645292737711,3,24,377,	+
chr6	10920953	10920975	G4126.1	NoAnnotation,,G4126.1,GCGAGGTCGTGGGTTCGAGTCCC,5,10920961,0.6533896219724132,2,4,21,	+
chr6	19871763	19871786	G4133.1	NoAnnotation,,G4133.1,ACTCTATTTTTTTCTTATTACTCG,15,19871781,0.6914934064837929,2,3,207,	+
chr6	23499568	23499592	G4137.1	NoAnnotation,,G4137.1,CCTATTGGCTGAATTTGATTGCTGT,59,23499573,0.7918843576170744,3,63,484,	+
chr1	195240734	195240772	G415.1	NoAnnotation,,G415.1,AGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAACA,584,195240749,0.8428260510331204,6,83,2378,	-
chr6	35198878	35198903	G4150.1	coding,Nup205,G4150.1,CCTCCAACTATTTATATTCCTTATTT,12,35198895,0.7496319958856266,3,11,116,ENSEMBL	+
chr6	38966129	38966150	G4157.1	intron,Tbxas1,G4157.1,AATTTGGAGGGTGCAAGCGTTC,11,38966135,0.74690371433985,2,12,47,HAVANA	+
chr6	39320809	39320830	G4158.1	NoAnnotation,,G4158.1,CACATGAAATCCCTGGGCTCAA,7,39320822,0.7566808833870697,2,9,19,	+
chr6	44792932	44792960	G4159.1	NoAnnotation,,G4159.1,ATGGTGAACTATGCCTGGGCAGGGCGAAG,127,44792958,0.9510922303506232,2,2,411,	+
chr6	44792962	44792993	G4159.2	NoAnnotation,,G4159.2,CAGAGGAAACTCTGGTGGAGGTCCGTAGCGGT,2763,44792983,0.710991193784672,4,21,13620,	+
chr6	44793224	44793263	G4160.1	repeat,MIRb,G4160.1,AGCCGGGCGTGGAATGTGAGTGCCTAGTGGGCCACTTTTG,31,44793256,0.8686770038938756,2,2,98,RepeatMasker	+
chr6	44793269	44793289	G4160.2	repeat,MIRb,G4160.2,CAGAACTGGCGCTGCGGGATG,335,44793272,0.6737654130249245,3,8,897,RepeatMasker	+
chr6	69516406	69516429	G4193.1	misc_RNA,Gm22179,G4193.1,GTCCAGGAGTTCTGGGCTGTAGTG,32,69516406,0.9731207606826612,2,2,179,ENSEMBL	+
chr6	69516450	69516478	G4194.1	misc_RNA,Gm22179,G4194.1,CGCACTAAGTTCGGCATCAATATGGTGAC,5,69516473,0.6585715109309989,2,3,29,ENSEMBL	+
chr6	71939841	71939864	G4196.1	intron,Polr1a,G4196.1,TTTAACTTTTTTCATACAATATTT,9,71939850,0.6091974783485795,4,5,106,ENSEMBL	+
chr6	85494894	85494914	G4202.1	NoAnnotation,,G4202.1,CTTTATTCATTTTATTTATTT,6,85494914,0.6644073566196831,2,4,86,	+
chr6	86403894	86403936	G4204.1	NoAnnotation,,G4204.1,CGCCGCTGGTGTAGTGGTATCATGCAAGATTCCCATTCTTGCG,93,86403927,0.8473248355356795,4,6,640,	+
chr6	91741058	91741080	G4207.1	intron,Slc6a6,G4207.1,TGTCGCGCTGGCGGGCCCGGTGG,6,91741069,0.9765854074897644,2,7,13,ENSEMBL	+
chr6	93682780	93682799	G4212.1	repeat,HAL1b,G4212.1,GGTGAAATGTGTAGAGATTT,10,93682789,0.5936879526013462,2,20,50,RepeatMasker	+
chr6	96695232	96695252	G4223.1	NoAnnotation,,G4223.1,ATACTAATAAACTAATAATTG,8,96695250,0.6183732808362811,5,7,49,	+
chr6	109779981	109780003	G4240.1	NoAnnotation,,G4240.1,ATTGTTTTTTTCACTGACCCGGT,11,109779981,0.8375793145467257,2,10,103,	+
chr6	113152685	113152707	G4243.1	3'utr,Setd5,G4243.1,TTTTTATTTATCTAATTTTGTAT,5,113152702,0.720828721162586,3,5,72,HAVANA	+
chr6	118474243	118474263	G4252.1	repeat,LTR84b,G4252.1,ATTATAACATTAATATTATTG,6,118474263,0.6317702789177991,3,3,54,RepeatMasker	+
chr6	127593903	127593924	G4265.1	intron,Efcab4b,G4265.1,GCTATACAAACCTGGAAATAGT,51,127593924,0.8277454874994504,2,5,202,HAVANA	+
chr6	134925261	134925285	G4272.1	3'utr,Cdkn1b,G4272.1,GAAAATTATACTAACTTATTTATGT,22,134925261,0.674961925565921,6,21,195,HAVANA	+
chr6	134931635	134931667	G4273.1	lincRNA_intron,RP23-45G16.5,G4273.1,GGGGCTATAGCTCAGTTGGGAGAGTGCTTGCCT,250,134931657,0.8380013455830286,5,474,1373,HAVANA	+
chr6	137380175	137380194	G4277.1	coding,Ptpro,G4277.1,ACCATATCCACCTCGAAACA,5,137380184,0.6236455077564412,2,8,7,ENSEMBL	+
chr6	139100182	139100202	G4279.1	NoAnnotation,,G4279.1,CTTTTAAATCACATATTTATT,21,139100202,0.6635395663489334,5,6,222,	+
chr10	17725593	17725627	G428.1	3'utr,Cited2,G428.1,AGAAAATACTTGTTAATTTATTCTATTTTAATTTG,30,17725593,0.8959844789540862,7,25,399,ENSEMBL	+
chr6	141491594	141491613	G4283.1	intron,Pde3a,G4283.1,TAACCTTTTATTTATTTCCT,10,141491611,0.652981801434186,3,3,117,ENSEMBL	+
chr6	145908341	145908361	G4284.1	NoAnnotation,,G4284.1,TGTTGCCTGTCTCCTTGGTGC,19,145908348,0.6218042453099242,2,38,133,	+
chr6	148408584	148408616	G4286.1	NoAnnotation,,G4286.1,GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTG,467,148408584,0.720629126318223,7,10,4219,	+
chr6	14179904	14179925	G4303.1	NoAnnotation,,G4303.1,CCATGTTGTTACGATCTGCTGT,37,14179904,0.9103357777887741,2,10,295,	-
chr6	18250367	18250389	G4308.1	NoAnnotation,,G4308.1,ATACATATTTCATTATTCTATTT,6,18250386,0.6743420876992828,2,4,73,	-
chr10	20040034	20040058	G431.1	intron,Map3k5,G431.1,TAATGATGATGATGATGGTTAGCGA,14,20040034,0.7332287546544841,2,2,91,HAVANA	+
chr10	20340469	20340489	G432.1	3'utr,Bclaf1,G432.1,ACCACACTAATTATTTTAACT,5,20340478,0.627082612768603,3,8,32,ENSEMBL	+
chr6	38958478	38958497	G4328.1	NoAnnotation,,G4328.1,TGGCTGGGAGACGGTTGTCT,5,38958491,0.9322451154812036,2,6,20,	-
chr6	47788148	47788180	G4337.1	misc_RNA,Rny1,G4337.1,GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTG,6,47788152,0.7927926167911385,2,2,43,ENSEMBL	-
chr6	47972723	47972749	G4338.1	repeat,MER94B,G4338.1,GGTGGGTGTAGCTCAGTTGGTAGAGTG,37,47972723,0.9137341035796008,3,38,204,RepeatMasker	-
chr6	49236453	49236589	G4341.1	NoAnnotation,,G4341.1,CAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGT,965,49236588,0.9409168629534671,22,78,6300,	-
chr6	51463061	51463085	G4344.1	3'utr,Hnrnpa2b1,G4344.1,ATTATTTAATAACATTACCTTACTG,11,51463071,0.638697465553331,7,11,101,ENSEMBL	-
chr6	51463371	51463394	G4345.1	intron,Hnrnpa2b1,G4345.1,TTTTACAATTATTATTATCTTGGG,8,51463371,0.8378146566207134,4,8,92,ENSEMBL	-
chr6	52169364	52169391	G4346.1	3'utr,Hoxa3,G4346.1,TTTTAAATATTATTTATCCCCATCCGTT,25,52169364,0.9904400417884062,5,25,265,HAVANA	-
chr6	52202110	52202139	G4347.1	3'utr,Hoxa5,G4347.1,ATATTTTTATTCAAACTACCTATATTCCTT,7,52202128,0.6508209908166769,7,8,76,HAVANA	-
chr6	52202437	52202459	G4349.1	3'utr,Hoxa5,G4349.1,CCCTAATTCATCTTTTAATCATG,5,52202437,0.8339215730155287,4,6,42,HAVANA	-
chr6	52231293	52231326	G4350.1	3'utr,Hoxa10,G4350.1,TTATTATAAATGTTAGTTCTAGCTTTATTTACTT,6,52231293,0.7781696444467581,3,9,65,HAVANA	-
chr6	53209131	53209154	G4354.1	NoAnnotation,,G4354.1,CGATGCCTGTGTATTTATCTGCTG,41,53209154,0.8931691146436096,2,3,366,	-
chr6	74954462	74954484	G4372.1	repeat,L1PREC2,G4372.1,CCTCATAATTCTAATATATTTCA,6,74954463,0.5614814917057184,4,5,52,RepeatMasker	-
chr6	83362385	83362408	G4381.1	3'utr,Tet3,G4381.1,TTTTAATAAATTTTATATTTATTT,7,83362397,0.743992534072452,3,6,101,HAVANA	-
chr6	87843288	87843310	G4388.1	3'utr,Cnbp,G4388.1,TATACTATATCACTTAGACAACT,19,87843296,0.7381888773786567,4,20,115,ENSEMBL	-
chr6	87997501	87997546	G4390.1	NoAnnotation,,G4390.1,CTAAACCATTCGTAGACGACCTGCTTCTGGGTCAGGGTTTCGTACG,27,87997502,0.841713705682259,2,3,162,	-
chr6	88112232	88112252	G4391.1	NoAnnotation,,G4391.1,TGAAAACCAGACATGGCATTA,15,88112233,0.6801372553064217,2,12,47,	-
chr6	89835718	89835744	G4393.1	NoAnnotation,,G4393.1,GACTGGCTCCGGGACTGCTGGGAAGGC,48,89835744,0.9662660325374942,2,50,141,	-
chr6	92992474	92992495	G4398.1	NoAnnotation,,G4398.1,TTTGGGAACTGCATTGGTTACT,8,92992495,0.8681366363324633,2,6,55,	-
chr6	97156303	97156323	G4402.1	intron,Tmf1,G4402.1,TGGGGTATTGCCAAGCAGTAC,3704,97156312,0.7669618499894545,3,3700,14820,HAVANA	-
chr6	100471527	100471559	G4408.1	NoAnnotation,,G4408.1,GGGTCCAGGGTTCAGGTCCCTGTTCGGGTGCCA,19,100471527,0.9791164774393718,3,15,120,	-
chr10	30811140	30811182	G441.1	repeat,MER11B,G441.1,TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCG,79,30811182,0.9133439037567971,7,12,710,RepeatMasker	+
chr6	109505320	109505344	G4417.1	NoAnnotation,,G4417.1,GCACGCAGTTTTATCCGGTAAAGCG,27,109505320,0.797427935703453,4,7,155,	-
chr6	123246214	123246234	G4433.1	NoAnnotation,,G4433.1,CCTTAAATCTATATTTACTAT,5,123246234,0.8872424191183358,2,2,41,	-
chr6	124149701	124149724	G4434.1	repeat,Tigger16b,G4434.1,CTTAACTTTAAGAAGGAGATTTTG,435,124149701,0.8108208812248423,4,38,3173,RepeatMasker	-
chr6	124742612	124742640	G4438.1	3'utr,Atn1,G4438.1,TTAATAATTTATATATATAAATATCTATA,7,124742640,0.9009489744007891,3,5,77,HAVANA	-
chr6	132004215	132004237	G4448.1	NoAnnotation,,G4448.1,TTTACATTCTCCCATTATTTATC,10,132004231,0.7839069409854194,2,11,104,	-
chr6	134446653	134446674	G4449.1	3'utr,Lrp6,G4449.1,TATAATGGCCAACATTTGGTCA,6,134446658,0.6889178303466464,2,3,37,HAVANA	-
chr10	35502404	35502425	G445.1	NoAnnotation,,G445.1,ATTTTGATTTTCAGTGTGAAGA,7,35502407,0.6853653796224305,2,2,66,	+
chr6	145932958	145932986	G4455.1	NoAnnotation,,G4455.1,AGGAAACTCTGGTGGAGGTCCGTAGCGGT,657,145932968,0.7369966387018018,2,38,3141,	-
chr6	145932991	145933023	G4455.2	NoAnnotation,,G4455.2,AAAGATGGTGAACTATGCCTGGGCAGGGCGAAG,47,145933012,0.8605160437281949,4,8,149,	-
chr10	39822437	39822461	G446.1	coding,Rev3l,G446.1,TATATTATTATTAATAGATTTAGAG,6,39822457,0.8312965509347477,2,7,63,ENSEMBL	+
chr7	16471911	16471933	G4468.1	rRNA,n-R5s151,G4468.1,AAATACCGGGTGCTGTAGGCTTA,89,16471919,0.6720859033502182,6,18,511,ENSEMBL	+
chr10	39874991	39875020	G447.1	3'utr,Rev3l,G447.1,CTTCTAAATATGCTTAAAATATTTTCTTTC,15,39875014,0.6451772338659307,6,8,166,HAVANA	+
chr7	17715231	17715257	G4472.1	intron,Ceacam5,G4472.1,ACTGTATCTTTGTGTTGGACTTTGAAC,5,17715243,0.6598219915087467,2,4,50,ENSEMBL	+
chr7	18230237	18230267	G4473.1	NoAnnotation,,G4473.1,ATTCCACTGAGCCACCCTACAGTCAGAAGAG,6,18230265,0.9852495246688013,2,5,13,	+
chr7	19610459	19610480	G4478.1	NoAnnotation,,G4478.1,GGGGCTATAGCTCAGTTGGGAG,12,19610475,0.719996686362719,2,12,48,	+
chr7	28984841	28984861	G4489.1	intron,Map4k1,G4489.1,TTAATTTAAATTAATTTATCT,9,28984854,0.5484023049608467,5,8,98,ENSEMBL	+
chr10	42544379	42544406	G449.1	NoAnnotation,,G449.1,TGGGAATAGCTCAGCGGTAGAGCACTTG,8,42544406,0.8887714152952703,2,7,30,	+
chr7	58399338	58399357	G4510.1	NoAnnotation,,G4510.1,ATTCCTGGTTTTCACCCAGG,52,58399357,0.9164684368177626,2,6,184,	+
chr7	59305119	59305148	G4512.1	3'utr,Ube3a,G4512.1,AACAAATCCTTTATTATTATTATAATTATT,7,59305119,0.7702368663872075,4,5,79,ENSEMBL	+
chr7	60156315	60156341	G4513.1	NoAnnotation,,G4513.1,TTTTTAATATATAACTATAATATATAT,13,60156319,0.5788891581809749,8,14,155,	+
chr7	66173347	66173371	G4515.1	3'utr,Chsy1,G4515.1,AAATACCTTTAATTTATTTAATATA,11,66173358,0.6151984276068904,6,10,114,HAVANA	+
chr7	67378414	67378438	G4518.1	repeat,LTR16E2,G4518.1,TTATAATTATTCTATTTTATTATTG,5,67378436,0.7479400066074452,4,6,74,RepeatMasker	+
chr10	47953300	47953325	G452.1	repeat,MSTB,G452.1,TCTATAATTTATCAATTATTTATTTT,6,47953300,0.8362888313692529,2,11,79,RepeatMasker	+
chr7	72879337	72879357	G4523.1	NoAnnotation,,G4523.1,TACTTATTTATTCCATTAATT,5,72879353,0.7940322727030334,2,4,53,	+
chr10	48365176	48365201	G453.1	NoAnnotation,,G453.1,CTCTTTGGTTCTATTTTGTTGGTTTC,17,48365176,0.9497378428453451,2,5,228,	+
chr7	82092551	82092575	G4533.1	repeat,AluY,G4533.1,CATTTCACCAGCTCTCCGTCTTTCA,6,82092564,0.763403919225658,2,5,45,RepeatMasker	+
chr7	82452333	82452354	G4535.1	intron,Adamtsl3,G4535.1,ATAGGGGATTGAAGATGATCAA,26,82452342,0.738999943795756,2,29,98,HAVANA	+
chr7	85652896	85652916	G4540.1	repeat,AT_rich,G4540.1,TCTCCTCTTTCATTTCTAATT,8,85652916,0.7501332511733074,3,4,92,RepeatMasker	+
chr7	86426744	86426769	G4541.1	repeat,THE1B-int,G4541.1,ATACTCTATTTATTTATTTATTTATT,5,86426765,0.738677980482142,2,4,80,RepeatMasker	+
chr7	89665030	89665051	G4546.1	intron,Me3,G4546.1,ACTTTCCTAGCAGCTTGTGAGA,9,89665033,0.7878356669174209,2,18,45,HAVANA	+
chr7	99244754	99244779	G4558.1	NoAnnotation,,G4558.1,TTTATTTTGTGGGTGGTGGTGCATGC,130,99244779,0.8951194133363944,6,13,1161,	+
chr7	112158738	112158764	G4570.1	repeat,AluSz,G4570.1,TACGGGTTCGAGTCCCGTCCCTTCCTT,21,112158759,0.7217985373910789,4,9,117,RepeatMasker	+
chr7	112280974	112280994	G4571.1	intron,Mical2,G4571.1,GAGGATTTTTCCCCCTTCTGA,11,112280987,0.6696415891321598,2,22,66,HAVANA	+
chr7	120792752	120792780	G4584.1	intron,Vwa3a,G4584.1,CTTCCCTAGGCCTGTGAAGTGGTACCTGT,5,120792772,0.8273370464530361,2,6,24,HAVANA	+
chr7	126945568	126945597	G4592.1	3'utr,Kctd13,G4592.1,TTTCATATTATTTATTATTTTAATTTTCTA,19,126945588,0.6935057762562638,9,23,310,HAVANA	+
chr7	127853414	127853433	G4593.1	NoAnnotation,,G4593.1,TTATCCTCTCACAATTCCCA,134,127853414,0.621623847126035,3,7,931,	+
chr7	128868557	128868585	G4594.1	NoAnnotation,,G4594.1,TTAACATTTTATTTTATTTTATTTTATTT,8,128868581,0.7896683803586981,2,5,131,	+
chr7	130834501	130834541	G4599.1	NoAnnotation,,G4599.1,AGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAACGGT,6651,130834501,0.920976041651784,8,220,26766,	+
chr7	130834546	130834576	G4599.2	NoAnnotation,,G4599.2,CAGGTGTCCTAAGGCGAGCTCAGGGAGGACA,2277,130834546,0.6865785892603273,4,54,8993,	+
chr10	55976309	55976328	G460.1	repeat,L1MC5,G460.1,TTGACGTTACCTGTAGAAGA,30,55976328,0.9982907257275865,2,60,120,RepeatMasker	+
chr10	58494966	58494990	G461.1	NoAnnotation,,G461.1,ATGTGATTTCTGCCCAGTGCTCTGA,125,58494983,0.6710198710913574,5,6,983,	+
chr7	144701799	144701824	G4616.1	NoAnnotation,,G4616.1,TCTTACATTTTACTTCAATATTTATT,5,144701808,0.6826008224633661,3,3,70,	+
chr7	4808079	4808102	G4617.1	NoAnnotation,,G4617.1,TTATTTAAATTATGGCTGGGGTGG,5,4808093,0.6365981009762512,4,5,42,	-
chr10	58495030	58495068	G462.1	repeat,CT-rich,G462.1,GTGGGAGTAACTATGAATCTCTTAAGGTAGCCAAATGAA,16,58495030,0.9397063498276657,2,2,94,RepeatMasker	+
chr10	58495072	58495102	G462.2	repeat,CT-rich,G462.2,GATTCCCACTGTCCCTACCTGCTATCCATTG,8,58495102,0.7604283328169962,2,3,56,RepeatMasker	+
chr7	25408435	25408459	G4628.1	intron,Cxcl17,G4628.1,TTTTAACTTTTAATTTTTCATGTTT,12,25408454,0.7002182244255201,2,2,180,ENSEMBL	-
chr7	26460861	26460888	G4629.1	NoAnnotation,,G4629.1,GCATGGGTGGTTCAGTGGTAGAATTCTC,25,26460888,0.7006594391247761,4,8,203,	-
chr7	28400987	28401011	G4635.1	3'utr,Samd4b,G4635.1,ATACATATTTATATAGTTCTTAACG,6,28401011,0.775787498310543,4,6,60,ENSEMBL	-
chr7	28794030	28794060	G4638.1	NoAnnotation,,G4638.1,GCCTGGATAGCTCAGTCGGTAGAGCATCAGA,7,28794047,0.7005977856958189,2,2,38,	-
chr10	58711325	58711345	G464.1	NoAnnotation,,G464.1,ATGTGGATGGGTAGGGGAGTG,6,58711345,0.9968363502570978,2,7,23,	+
chr7	28893556	28893582	G4640.1	3'utr,Actn4,G4640.1,AATTACTATTTACTTTATTAACTTACG,130,28893561,0.6753890254516168,12,155,1406,HAVANA	-
chr7	30568928	30568950	G4644.1	3'utr,Kmt2b,G4644.1,TTCTAAATCCCTTCTTTTCTATG,8,30568928,0.8412059831349632,3,4,85,HAVANA	-
chr7	34140949	34140974	G4646.1	3'utr,Uba2,G4646.1,ATCTAACCATTTTCATACTCTTACCT,7,34140965,0.6306746714906921,5,7,53,HAVANA	-
chr7	36698071	36698092	G4650.1	NoAnnotation,,G4650.1,TCTCCGCGTCCCCCCCTCGCTG,10,36698071,0.908941884340464,2,13,30,	-
chr7	45028000	45028032	G4658.1	3'utr,Prr12,G4658.1,CATCTTGTTAATTATTTTTAATCTTATTTATTG,10,45028018,0.5815163597363663,8,10,159,ENSEMBL	-
chr7	50557893	50557912	G4662.1	antisense,1700081H22Rik,G4662.1,GATTCCCTGGTCTGGAGCCA,12,50557893,0.8869343146081677,2,24,36,HAVANA	-
chr7	50721580	50721600	G4663.1	NoAnnotation,,G4663.1,AATAATAAATATCTCCTATTT,6,50721600,0.8047817730210488,2,2,51,	-
chr7	51488463	51488482	G4664.1	repeat,L1MA9,G4664.1,ACATAGCATTGTGATGGTTA,8,51488463,0.7171228044899475,2,16,40,RepeatMasker	-
chr7	54072399	54072425	G4666.1	NoAnnotation,,G4666.1,CATACCTATTTATTTATTTATTTATTT,19,54072404,0.691624030182429,2,3,295,	-
chr7	58620363	58620382	G4671.1	NoAnnotation,,G4671.1,TACCTAGGCTAGAATGTGTG,6,58620363,0.8778227655223934,2,6,29,	-
chr7	59960472	59960491	G4672.1	NoAnnotation,,G4672.1,CCTTAACTTACTTATTTTAT,7,59960484,0.7581503560972026,3,7,70,	-
chr7	63768256	63768277	G4675.1	NoAnnotation,,G4675.1,TTCTAAATCCCTTCTTTTCTAT,6,63768256,0.8195663827317837,2,6,64,	-
chr7	65085052	65085073	G4676.1	intron,Fam189a1,G4676.1,CTGGCCTTTTGCTTATATGTTA,5,65085059,0.7722693815818787,2,10,45,HAVANA	-
chr7	66645451	66645470	G4680.1	3'utr,Asb7,G4680.1,TATAATTCCATTATTTATTG,6,66645461,0.6774315703165062,4,6,60,HAVANA	-
chr7	76244489	76244511	G4689.1	NoAnnotation,,G4689.1,CTTTTTATATACTATATTTCATT,5,76244489,0.8645517990406841,2,4,60,	-
chr7	78184804	78184828	G4692.1	NoAnnotation,,G4692.1,TCTTTCAAATTATTTTTCCATCTTT,8,78184828,0.6631249069122395,3,4,105,	-
chr7	80319310	80319332	G4697.1	coding,Rccd1,G4697.1,ATATTTATATCTGGGGCTGGAAT,5,80319324,0.5937413386747629,5,7,35,HAVANA	-
chr7	81421211	81421240	G4699.1	intron,Cpeb1,G4699.1,ATGTAATATTTATTTCATTAATTTCTTTCC,20,81421218,0.7229150915027958,8,23,265,ENSEMBL	-
chr7	95538654	95538673	G4707.1	NoAnnotation,,G4707.1,TTTTTTTCACCTATTTATTT,6,95538673,0.7758186435604811,2,6,78,	-
chr7	97549854	97549890	G4710.1	NoAnnotation,,G4710.1,GCATGGCCATTCTTAGTTGGTGGAGTGATTTGTCTGG,288,97549889,0.8986808916174231,6,7,2604,	-
chr7	99543946	99543971	G4713.1	NoAnnotation,,G4713.1,TCCCTGGTGGTCTAGTGGTTAGGCTT,23,99543968,0.7392813660328778,3,5,198,	-
chr7	109636735	109636756	G4721.1	NoAnnotation,,G4721.1,CATCTCTAAATTAATATTATTC,25,109636739,0.5870767523037054,4,4,245,	-
chr7	109706734	109706755	G4722.1	NoAnnotation,,G4722.1,ATGTGATGAGAGGACTGAGAAG,7,109706752,0.6345579698316629,2,8,20,	-
chr7	110059703	110059737	G4724.1	3'utr,AA474408,G4724.1,AATTCACCAAGCGTTGGATTGTTCACCCACTAATA,235,110059732,0.68151319854223,8,26,1699,ENSEMBL	-
chr7	110059749	110059776	G4724.2	3'utr,AA474408,G4724.2,TTTGATCCTTCGATGTCGGCTCTTCCTA,310,110059776,0.6252045380871734,9,22,2713,ENSEMBL	-
chr7	110059778	110059813	G4724.3	3'utr,AA474408,G4724.3,AAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCT,150,110059778,0.6536785630186082,5,10,796,ENSEMBL	-
chr7	110059837	110059867	G4725.1	3'utr,AA474408,G4725.1,TCTCCAAGGTGAACAGCCTCTGGCATGTTGG,22,110059867,0.8566244335942074,2,2,111,ENSEMBL	-
chr7	110656989	110657012	G4726.1	NoAnnotation,,G4726.1,CTTACTATATTCCTTTATCATAAT,10,110656997,0.7210137400331699,3,8,100,	-
chr7	111076061	111076093	G4727.1	snoRNA,Gm23262,G4727.1,TCCTATGAGCGAAGATTATGAGATATGAGGGCA,15,111076061,0.6644480535289091,3,4,83,ENSEMBL	-
chr7	118659271	118659290	G4737.1	NoAnnotation,,G4737.1,GCCCCTTTAGCTCAGTTGGC,10,118659271,0.8238318901941827,2,10,50,	-
chr7	120754175	120754219	G4741.1	repeat,AluSc8,G4741.1,TGAAGAAATTCAATGAAGCGCGGGTAAACGGCAGGAGTAACTATG,31,120754203,0.7357032622728827,3,9,110,RepeatMasker	-
chr7	122813216	122813241	G4746.1	NoAnnotation,,G4746.1,CAAAAGCTCGCTTGATCTTGATCGTC,35,122813216,0.9427684101263152,2,3,207,	-
chr7	126491852	126491880	G4749.1	3'utr,Atxn2l,G4749.1,ATCTTTTATTTTCTATTATTTATAACCTC,56,126491867,0.6105127627931948,13,41,840,HAVANA	-
chr7	127853412	127853433	G4751.1	NoAnnotation,,G4751.1,TGGGAATTGTGAGAGGATAACT,115,127853433,0.8707044549089781,4,53,529,	-
chr7	139389765	139389786	G4759.1	NoAnnotation,,G4759.1,TCGAGTTTGGCCTCGGGTACCA,12,139389765,0.9844996132815143,2,24,43,	-
chr8	4247569	4247596	G4765.1	3'utr,Map2k7,G4765.1,TTTTATTTTTATTTAACTTTATTTTCTG,12,4247596,0.7296959472749489,8,13,202,HAVANA	+
chr10	67256153	67256172	G477.1	3'utr,Jmjd1c,G477.1,CTAAATATTAAACTTAATAT,9,67256161,0.6233712086309601,4,9,63,HAVANA	+
chr8	15519773	15519818	G4772.1	NoAnnotation,,G4772.1,ATCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTC,131,15519773,0.9984365863859549,5,25,610,	+
chr8	15520050	15520090	G4773.1	NoAnnotation,,G4773.1,GAGCCGGGCGTGGAATGCGAGTGCCTAGTGGGCCACTTTTG,636,15520055,0.8523144751299264,6,24,3294,	+
chr8	19541048	19541069	G4777.1	NoAnnotation,,G4777.1,TATTATAACATTAATATTATTG,11,19541069,0.6508881285393544,5,13,104,	+
chr8	26980208	26980263	G4781.1	3'utr,Zfp703,G4781.1,CCCTCCCCCACCGGACTGTGTATTTATTTACTATAATGTTAGCTTACAAGCTGGGA,99,26980208,0.9910823563534792,12,110,1157,ENSEMBL	+
chr8	39070813	39070836	G4791.1	intron,Tusc3,G4791.1,TAAACAGTCTCTAGTTGATAGAAT,7,39070813,0.9629763341203745,2,8,40,ENSEMBL	+
chr8	47289350	47289371	G4796.1	NoAnnotation,,G4796.1,GGTTGCGCTGGCGGGCCCGGGG,6,47289364,0.8864573978524198,2,6,12,	+
chr8	48867969	48867988	G4799.1	repeat,AluYa5,G4799.1,AAAACTGGACATGGCACATC,8,48867969,0.9962055685237101,2,9,15,RepeatMasker	+
chr8	52265095	52265116	G4802.1	repeat,THE1D,G4802.1,ACATATATATATTTTTTAATTT,9,52265112,0.7212301521240919,2,8,108,RepeatMasker	+
chr8	64262399	64262424	G4808.1	NoAnnotation,,G4808.1,ATATTTAAATTTATAATTTATTTATT,7,64262412,0.7041593966343683,3,6,100,	+
chr8	75030964	75031011	G4815.1	3'utr,Hmgxb4,G4815.1,ATTTAACTCTTTAGAATTTCTTAGATTTTAATTTATCCTGTAAATTTC,6,75030964,0.994188898789854,2,4,57,HAVANA	+
chr8	84611181	84611204	G4828.1	intron,Cacna1a,G4828.1,TTTTGAATCACACAGGTGTCCCCA,6,84611182,0.7191626148913297,2,5,23,HAVANA	+
chr8	97017933	97017955	G4841.1	NoAnnotation,,G4841.1,AGACCCCATGAAGCTTTACTGTA,78,97017955,0.7249799370567456,3,5,458,	+
chr8	103065576	103065600	G4851.1	repeat,AT_rich,G4851.1,AACTTATAAAATTATATATATATAT,19,103065587,0.7007434360852063,4,8,182,RepeatMasker	+
chr8	104953591	104953613	G4853.1	coding,Ces2f,G4853.1,TGACCACGGTGATGAGCTTTACC,119,104953591,0.9961779399891662,2,4,595,ENSEMBL	+
chr8	105252636	105252661	G4854.1	3'utr,D230025D16Rik,G4854.1,TATAATTTTATCCCATTTTTAATATT,7,105252653,0.6655760203602316,5,8,83,HAVANA	+
chr8	107373442	107373469	G4856.1	3'utr,Nfat5,G4856.1,TTCACTATATATTTAATATTTTATTATT,18,107373442,0.8713945395704259,8,33,247,ENSEMBL	+
chr8	107511617	107511637	G4857.1	intron,Wwp2,G4857.1,CCCCGTGGCTGCCTGATGCCC,17,107511637,0.989595087046867,2,33,35,ENSEMBL	+
chr10	74822276	74822296	G486.1	NoAnnotation,,G486.1,TTTCTCATCCATTATCTATCT,5,74822285,0.7211616747430369,3,5,49,	+
chr8	111952550	111952574	G4861.1	3'utr,Gabarapl2,G4861.1,TTTCCTTAGATTAGTAAATTATCAT,6,111952559,0.7595568596448447,2,10,56,HAVANA	+
chr8	113131959	113131981	G4863.1	repeat,L1PA5,G4863.1,ATTATTCCTCTTACATATTTATT,8,113131963,0.6063907384996654,3,4,97,RepeatMasker	+
chr10	76060799	76060823	G487.1	repeat,Cheshire,G487.1,ATTTTTATTTATTTACTTACTCATT,5,76060799,0.9988742960885933,2,2,27,RepeatMasker	+
chr8	120581303	120581325	G4874.1	3'utr,Gse1,G4874.1,AATGTAGTAATTAGGTATTTATG,23,120581313,0.7332817405756314,5,27,201,HAVANA	+
chr8	127996415	127996439	G4886.1	NoAnnotation,,G4886.1,AAACATACTATATTTTATCTTATTT,5,127996433,0.6714866877616107,2,2,53,	+
chr8	3754460	3754488	G4890.1	NoAnnotation,,G4890.1,ATTGGATGGTTTAGTGAGGCCCTCGGATC,95,3754480,0.6420147799590442,4,13,620,	-
chr8	3754523	3754558	G4891.1	NoAnnotation,,G4891.1,ACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTG,226,3754539,0.7074876228434098,5,23,1256,	-
chr8	3754679	3754716	G4892.1	NoAnnotation,,G4892.1,ATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTCC,149,3754679,0.9120696255860561,7,41,934,	-
chr8	5069253	5069278	G4894.1	rRNA,n-R5s93,G4894.1,AATACCGGGTGCTGTAGGCTTAAAAA,828,5069270,0.5875079684020285,4,9,4958,ENSEMBL	-
chr8	8681789	8681818	G4899.1	intron,Arglu1,G4899.1,ACAAATATTCACTTTATTTATATTTTATAT,19,8681808,0.6351081594046241,7,18,209,ENSEMBL	-
chr8	15474584	15474604	G4909.1	repeat,L1MC4a,G4909.1,AAACTCAGGTGCTGTAATTTT,6,15474584,0.699556726317086,2,8,35,RepeatMasker	-
chr8	17425707	17425731	G4912.1	intron,Csmd1,G4912.1,ATTGTGGGTGGTGGTGTCTGGCCAT,9,17425714,0.7550530218845709,2,10,61,HAVANA	-
chr8	28803193	28803213	G4922.1	intron,Unc5d,G4922.1,TTATCCGCTCACAGTTTCCTA,13,28803193,0.8955867320850366,2,13,83,ENSEMBL	-
chr8	32508795	32508815	G4925.1	NoAnnotation,,G4925.1,TATGGTATCTGTGCTCTGCAA,96,32508804,0.7399688620457008,3,99,668,	-
chr8	40492857	40492877	G4933.1	3'utr,Cnot7,G4933.1,CAATCTATTTTATATATATTG,6,40492857,0.5716442216177067,5,5,61,HAVANA	-
chr8	40493688	40493713	G4934.1	3'utr,Cnot7,G4934.1,TTGTTTTTCCCTTTTCCTAAATTAAC,6,40493713,0.6002008423470477,3,5,70,HAVANA	-
chr8	47124101	47124122	G4941.1	NoAnnotation,,G4941.1,AGTTAGCTCAGTTGGTTAGAGC,8,47124111,0.6733732817387167,2,7,48,	-
chr8	47448089	47448114	G4942.1	NoAnnotation,,G4942.1,CTTTTAAATTACATATTTATTTAACT,27,47448107,0.668002988550467,8,25,309,	-
chr8	51874183	51874203	G4945.1	NoAnnotation,,G4945.1,ATTCAACTGTGATAAACTAAT,74,51874183,0.8528532164352184,2,3,443,	-
chr8	53621531	53621552	G4948.1	intron,Neil3,G4948.1,CTTTATTCATTTTATCTATTTT,5,53621542,0.7202226868103746,2,4,68,HAVANA	-
chr8	57318554	57318577	G4952.1	NoAnnotation,,G4952.1,GTGGTAGGATAGCGTTCTGTAGGT,16,57318558,0.6905310196533891,2,4,105,	-
chr8	62368698	62368719	G4956.1	NoAnnotation,,G4956.1,CTGTCACGTGTTCTTCTGCGGC,305,62368719,0.8319896094042208,2,602,1838,	-
chr8	62447732	62447751	G4957.1	repeat,MLT1B,G4957.1,AAACTGGACATGTCACTCTA,32,62447751,0.996818748535928,2,38,122,RepeatMasker	-
chr8	66320263	66320286	G4963.1	NoAnnotation,,G4963.1,TGTTGTCTGTCTCACTGGTGCAAA,6,66320280,0.7358408052915085,2,11,41,	-
chr10	82648955	82648975	G497.1	3'utr,Tdg,G497.1,CTTTTTATATACTATATTTCA,6,82648961,0.6102292176392367,5,8,64,HAVANA	+
chr8	75352608	75352627	G4971.1	repeat,L1ME3C,G4971.1,AGCTGGGAAACTGTCGTGTA,24,75352627,0.9171159891418136,2,42,78,RepeatMasker	-
chr8	85111912	85111944	G4982.1	intron,Zfp791,G4982.1,CTTCTGGGTCGGGGTTTCGTACGTAGCAGAGCA,172,85111919,0.654551121781234,8,16,1207,ENSEMBL	-
chr8	89028050	89028071	G4985.1	3'utr,Sall1,G4985.1,CATTAACTTATTTTCTATATCC,6,89028054,0.7048766712682307,3,4,62,ENSEMBL	-
chr8	89146459	89146483	G4986.1	NoAnnotation,,G4986.1,TATTTTTTATTTACATTTTATATTT,8,89146466,0.6032538072917933,6,9,126,	-
chr10	82955089	82955117	G499.1	repeat,MER4B-int,G499.1,TGTGAAACTTAAAGGAATTGACGGAAGGG,83,82955099,0.7094424836570046,3,15,271,RepeatMasker	+
chr8	93377797	93377816	G4991.1	repeat,L1PA2,G4991.1,CTCATATACATCTCCATATT,17,93377816,0.7442964180288352,2,2,134,RepeatMasker	-
chr8	94473459	94473479	G4995.1	NoAnnotation,,G4995.1,CTACTCACCAGACTCGTCTTG,8,94473470,0.8092502766197821,2,11,37,	-
chr8	95757057	95757084	G4997.1	snoRNA,Gm26265,G4997.1,AAGCACTGCCTTTGAATCTGATGTGTCT,6,95757068,0.7093958958199892,3,7,35,ENSEMBL	-
chr8	121579246	121579275	G5020.1	NoAnnotation,,G5020.1,TCAGTCTCATAATCTGAAGGTCGTGAGTTC,8,121579263,0.6728570563248432,2,3,51,	-
chr8	123554058	123554085	G5024.1	rRNA,n-R5s109,G5024.1,CCTGGAAATACCGGGTGCTGTAGGCTTT,20,123554072,0.689019234331321,2,2,155,ENSEMBL	-
chr10	83595649	83595684	G503.1	3'utr,A230046K03Rik,G503.1,CTAAAGCATGCTGCATAATTAATAATTTATATTTTC,7,83595649,0.9941574351160856,5,5,74,ENSEMBL	+
chr9	9680424	9680445	G5033.1	NoAnnotation,,G5033.1,CTATTTTTTATTCTATTTATTT,7,9680426,0.7593417991147108,3,4,106,	+
chr9	14927612	14927631	G5040.1	NoAnnotation,,G5040.1,TGAATTCCTTAGCTCTCACC,6,14927612,0.8905375117511781,2,11,30,	+
chr9	17987788	17987829	G5044.1	NoAnnotation,,G5044.1,TAACTTTGATATAAGGATTGGCTCTAAGGGCTGGGTCAGTCG,261,17987793,0.9065031774698419,6,44,1473,	+
chr9	20927394	20927413	G5050.1	repeat,MIRc,G5050.1,ATATTTATACTTTTATACTT,5,20927407,0.7330422918896239,2,4,51,RepeatMasker	+
chr9	25308213	25308239	G5056.1	3'utr,Sept7,G5056.1,TAATAACATTTAATTTAGATATTTTCC,33,25308228,0.7043231844876218,4,36,273,ENSEMBL	+
chr9	32236402	32236426	G5061.1	intron,Arhgap32,G5061.1,AATATAGGCTGGGTGTGGAAGTGCA,80,32236426,0.917559557371104,2,51,365,HAVANA	+
chr9	42704563	42704586	G5075.1	NoAnnotation,,G5075.1,AATGGGCTATCATCATTATCATCG,10,42704569,0.7554716252949836,2,11,64,	+
chr10	86282704	86282723	G508.1	NoAnnotation,,G508.1,TCTTATTATTTTTTTTATAT,14,86282719,0.6886956550168899,2,11,199,	+
chr9	64175436	64175460	G5092.1	snoRNA,Snord16a,G5092.1,TAATTTGCGTCTTACTCTGTTCACA,15,64175436,0.7274569479076505,2,2,151,ENSEMBL	+
chr9	69386179	69386203	G5099.1	3'utr,Rora,G5099.1,TTTTACTATATAATCTATTTTAGAC,6,69386202,0.7981192838204038,2,6,69,HAVANA	+
chr9	71743152	71743172	G5101.1	NoAnnotation,,G5101.1,TGTGGCTATAGCTCAGTTGGT,134,71743152,0.7810811920080272,2,7,1065,	+
chr9	72632190	72632213	G5102.1	NoAnnotation,,G5102.1,ATAGCTCAGTTGGTAGAGCAGAGG,6,72632213,0.9056105889983618,2,3,22,	+
chr9	76501556	76501576	G5108.1	NoAnnotation,,G5108.1,TATTTCTAAATTAATATTACT,19,76501571,0.7095864653167357,2,3,201,	+
chr9	80399475	80399517	G5113.1	NoAnnotation,,G5113.1,TGATCCTTCGATGTTGGCTCTTCCTATCATTGTGAAGCAGAAT,14,80399511,0.9812717049227068,3,4,112,	+
chr9	80399523	80399553	G5113.2	NoAnnotation,,G5113.2,AAGCGTTGGATTGTTCACCCACTAATAGGGA,1589,80399553,0.7432488245976429,8,39,12343,	+
chr9	80788475	80788494	G5114.1	NoAnnotation,,G5114.1,AAAGCGGTCATGTGACTAAA,17,80788475,0.6385626336968531,2,2,66,	+
chr9	87559660	87559682	G5123.1	NoAnnotation,,G5123.1,TATCTCTTAAATATTTATTTTTT,9,87559682,0.6739222414247278,5,5,117,	+
chr9	88854680	88854701	G5125.1	lincRNA_intron,Gm26567,G5125.1,ATATTCTATTTACATTATTTAT,5,88854681,0.7723933208682057,2,7,58,ENSEMBL	+
chr9	99220419	99220441	G5132.1	NoAnnotation,,G5132.1,TGTGTGTCCCCAGTTTGATCCTG,20,99220434,0.6872821161088637,2,23,113,	+
chr9	104788249	104788269	G5137.1	intron,Cpne4,G5137.1,CTCTCATAATTTTATTTTATT,6,104788265,0.6099907122321043,2,3,73,HAVANA	+
chr9	110281244	110281336	G5144.1	miRNA,mmu-mir-6236,G5144.1,TGGACAGTGGCCATGGAAGTAGAAATCTGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCTGAAAATGGATGGCGCTGGAGC,1824,110281244,0.9991906827859506,11,83,8923,ENSEMBL	+
chr9	112008572	112008593	G5146.1	repeat,AluSz,G5146.1,TGCTCTGGAAAGTGTGGCCATG,32,112008587,0.7775808437364887,2,36,129,RepeatMasker	+
chr9	113756738	113756843	G5149.1	repeat,L1MC4,G5149.1,CATTCTGGAGAGGGAGCCTGAGAACCGGCTACCACGTCCAAGGAAGGCAGCAGGTGTGCAAATTACCCACTCCCGACATGGGGAGGTTGTGACAAAAAATAACAAT,23,113756821,0.9998009171718151,4,11,59,RepeatMasker	+
chr9	113929078	113929129	G5150.1	repeat,L1M2a,G5150.1,CATGGTCATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTC,264,113929109,0.8242144937270597,8,25,1518,RepeatMasker	+
chr9	123461841	123461875	G5157.1	3'utr,Lars2,G5157.1,AGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAG,639,123461844,0.6622255826336099,6,12,2758,ENSEMBL	+
chr9	123461880	123461925	G5158.1	3'utr,Lars2,G5158.1,AATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTG,1158,123461891,0.9454916502796584,8,24,9421,ENSEMBL	+
chr9	123461964	123462176	G5159.1	3'utr,Lars2,G5159.1,ATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGCGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGATTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCAGTACGAG,15019,123462044,0.9519068900177704,55,421,135386,ENSEMBL	+
chr9	3257742	3257777	G5161.1	NoAnnotation,,G5161.1,AGGAGTCGCAGGTTCAGACATTTGGTGTATGTGCTT,158,3257777,0.9996563908788315,5,25,1171,	-
chr9	3258820	3258913	G5165.1	repeat,L1ME4a,G5165.1,AAAAGGTGTTGGTTGATATAGACAGCAAGATGTTGGCCATGGAAGTCGGAATCCGCTAAGGAGTGTGTAACAACTCACCTGTCAAATCAACTAG,7839,3258820,0.9982037275229672,17,412,42351,RepeatMasker	-
chr9	8427062	8427081	G5170.1	NoAnnotation,,G5170.1,TCCCCCAAATAATAATATTA,21,8427062,0.6464407041961665,2,2,124,	-
chr9	14323918	14323937	G5177.1	NoAnnotation,,G5177.1,AGGAGTGGTGTCGCTGGGTC,11,14323937,0.9137045241818059,2,22,33,	-
chr10	96952425	96952447	G518.1	repeat,MLT2B3,G518.1,TGGGTGTGTTGGGGTACCAGGAC,7,96952425,0.8715921058968394,2,7,30,RepeatMasker	+
chr9	24335724	24335745	G5183.1	repeat,L1MA8,G5183.1,TCAAGTCTCGCCTTCCGCTCCC,10,24335731,0.7560519758012937,2,11,48,RepeatMasker	-
chr9	33288796	33288822	G5190.1	NoAnnotation,,G5190.1,TTGGGGAAATGTGAGTGGATAACAGCA,697,33288807,0.7575454373009786,2,685,2161,	-
chr9	36442270	36442302	G5194.1	NoAnnotation,,G5194.1,CTTTAATTAAATCATACTTATAAAAAACTATTT,6,36442270,0.974168950105647,5,7,50,	-
chr9	45683012	45683032	G5198.1	NoAnnotation,,G5198.1,TTTACAGATGGCATGACAGAA,11,45683032,0.7308362406902635,2,5,45,	-
chr9	56223578	56223598	G5212.1	intron,C230081A13Rik,G5212.1,CTCCCTCGCTGCGATCTATTG,7,56223593,0.9593501997970014,2,2,47,ENSEMBL	-
chr9	56223612	56223674	G5212.2	intron,C230081A13Rik,G5212.2,GTTCGTGTGGAACCTGGCGCTAAACCATTCGTAGACGACCTGCTTCTGGGTCGGGGTTTCGTA,1220,56223624,0.9100555259173572,10,25,7407,ENSEMBL	-
chr9	56223709	56223769	G5214.1	miRNA,Gm24270,G5214.1,TCGGGACCGGGGTCCGGTGCGGAGAGCCGTTCGTCTTGGGAAACGGGGTGCGGCCGGAAAG,69,56223719,0.9999315064608633,3,75,141,ENSEMBL	-
chr9	56223807	56223837	G5215.1	intron,C230081A13Rik,G5215.1,CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG,106,56223807,0.9999019472584375,3,55,381,ENSEMBL	-
chr9	56223884	56223924	G5216.1	intron,C230081A13Rik,G5216.1,GGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTA,2348,56223921,0.6629119881950537,7,120,14355,ENSEMBL	-
chr9	60561109	60561128	G5222.1	NoAnnotation,,G5222.1,GGTTTGGTAGCTCAGCTGGT,12,60561124,0.6705134409990581,2,11,73,	-
chr9	64185801	64185837	G5225.1	3'utr,Map2k1,G5225.1,TTTATCAAATCTAATCTCTTATTCTAATAAAAATACT,64,64185817,0.6323702618576185,8,51,698,HAVANA	-
chr9	65971905	65971925	G5229.1	repeat,L1MC5,G5229.1,TAAATATTTTTCCTTAAATCT,33,65971918,0.59294270679507,4,5,352,RepeatMasker	-
chr10	103456081	103456102	G523.1	NoAnnotation,,G523.1,TATACATTTTTATTTCATAATT,5,103456102,0.714186612178895,3,5,60,	+
chr9	69758272	69758292	G5232.1	3'utr,Foxb1,G5232.1,ACCTTTTTAGCTATTTATTTT,25,69758286,0.732320557726461,3,25,276,ENSEMBL	-
chr9	70717508	70717527	G5233.1	NoAnnotation,,G5233.1,TGTGGTATCGCTAAGAGGTA,28,70717515,0.8846316546016101,2,28,140,	-
chr9	71844612	71844642	G5236.1	3'utr,Tcf12,G5236.1,TTTCTTACTTTATTTTATTATATTAGGTAGT,15,71844612,0.8440967442231151,5,16,235,HAVANA	-
chr9	71844727	71844753	G5237.1	3'utr,Tcf12,G5237.1,CTTATTTTTCACTGTAGCTAGTCTTTT,5,71844727,0.9090076667374373,3,3,60,HAVANA	-
chr9	71846203	71846224	G5238.1	3'utr,Tcf12,G5238.1,TAACTACAAATTTTATTTATTG,30,71846215,0.6400532261086828,7,26,299,HAVANA	-
chr10	104113566	104113589	G524.1	NoAnnotation,,G524.1,AAAACTTATTTTTTATTTCCCTTT,11,104113589,0.8740482295997314,2,9,139,	+
chr9	75387357	75387380	G5242.1	3'utr,Mapk6,G5242.1,AAATACATCACATCTTATTTATTT,5,75387380,0.8614407935191049,2,4,48,HAVANA	-
chr10	105238134	105238162	G525.1	repeat,MER39B,G525.1,ATGGTGAACTATGCCTGGGCAGATCGAAG,5,105238162,0.9952050838261358,2,2,25,RepeatMasker	+
chr9	85975037	85975059	G5255.1	NoAnnotation,,G5255.1,TATTTCTAAAGTAATATCATTTT,52,85975059,0.7421781852626025,2,2,577,	-
chr9	86861610	86861631	G5257.1	intron,Snap91,G5257.1,AACTCTTGACATGGTCGGAATT,23,86861631,0.8663175813526426,2,31,115,ENSEMBL	-
chr10	105238316	105238338	G526.1	NoAnnotation,,G526.1,ACACGCAGTTTTATCCGGTAAAG,51,105238316,0.8218755114618308,2,2,304,	+
chr9	95947753	95947772	G5269.1	lincRNA_intron,Gm16794,G5269.1,ACATATGATGAACTTTGAAA,13,95947753,0.6555732684639931,2,25,53,ENSEMBL	-
chr10	105238421	105238463	G527.1	NoAnnotation,,G527.1,TGGAGCCGGGCGTGGAATGCGAGTGCCTAGTGGGCCACTTTTG,643,105238421,0.9407392187367242,6,28,2699,	+
chr9	101030638	101030659	G5272.1	intron,Pccb,G5272.1,CTATCTAATTTTTAATCTTTTT,5,101030641,0.6607559750400682,3,5,61,HAVANA	-
chr9	104408694	104408715	G5275.1	repeat,L1MA4,G5275.1,ATTCCTGGTTTTCACCCAGGCG,32,104408701,0.7646920843681885,3,25,169,RepeatMasker	-
chr9	105048467	105048488	G5277.1	repeat,AluSz,G5277.1,CAGGATTCCCTTAGTAACGGAG,33,105048476,0.6676686421491353,2,34,131,RepeatMasker	-
chr10	105238469	105238521	G528.1	NoAnnotation,,G528.1,CAGAACGGGCGCTGCGGGATGAACCGAACGCCGGGTTAAGGCGCCCGATGCCA,547,105238469,0.9853597985705517,5,15,1491,	+
chr9	105819466	105819528	G5280.1	intron,Col6a6,G5280.1,GGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCCAGGCG,3226,105819525,0.6691114868982492,12,216,23975,ENSEMBL	-
chr9	118674953	118674988	G5290.1	repeat,MIRb,G5290.1,ATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTGT,22,118674975,0.8972233560866423,2,3,135,RepeatMasker	-
chr9	118675044	118675072	G5290.2	NoAnnotation,,G5290.2,CGTGGAACCTGGCGCTAAACCATTCGTAG,77,118675044,0.6082798088310216,4,4,377,	-
chr9	118675093	118675115	G5291.1	NoAnnotation,,G5291.1,TTGGGAAACGGGGTGCGGCCGGA,779,118675097,0.9999989187203423,2,1556,778,	-
chrM	301	331	G5296.1	Mt_rRNA,mt-Rnr1,G5296.1,ATTTCGTGCCAGCCACCGCGGTCATACGATT,6,325,0.7828708366517104,2,5,22,ENSEMBL	+
chrM	569	602	G5298.1	Mt_rRNA,mt-Rnr1,G5298.1,CCATAGCTTAAAACTCAAAGGACTTGGCGGTACT,14,590,0.8467902892761633,2,13,59,ENSEMBL	+
chrM	671	696	G5299.1	Mt_rRNA,mt-Rnr1,G5299.1,TTCAGCCTATATACCGCCATCTTCAG,36,671,0.9492608208947296,4,12,218,ENSEMBL	+
chrM	1934	1961	G5303.1	Mt_rRNA,mt-Rnr2,G5303.1,TTTACCAAAAACATCACCTCTAGCATTA,5,1939,0.7822522426615688,2,3,26,ENSEMBL	+
chrX	4136306	4136365	G5307.1	repeat,L1PA15,G5307.1,CGTGGGCCCGGGTGGAGCCGCTGCAGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAA,3515,4136326,0.9928387242729954,13,1348,16498,RepeatMasker	+
chrX	4899380	4899436	G5308.1	NoAnnotation,,G5308.1,GCGGGCCCGGGTGGAGCTGCTGCAGGTGCAGATCTTGGTGGTAGTAGCAAATATTCA,2865,4899399,0.9948019875462457,13,118,21039,	+
chrX	6106980	6107011	G5311.1	rRNA,n-R5s2,G5311.1,ACCGCCTGGGAATACCGGGTGCTGTAGGCTTA,772,6106999,0.5898934591150964,7,30,5263,ENSEMBL	+
chrX	9972837	9972864	G5315.1	intron,Sytl5,G5315.1,TGCTGCTGCTGCTGCTGGCCACTGGTCT,21,9972853,0.7778584990206099,2,3,141,HAVANA	+
chrX	13169861	13169880	G5317.1	3'utr,Usp9x,G5317.1,GCAGTTGGATCACCTCCTTT,18,13169861,0.8679846338457058,2,16,110,HAVANA	+
chrX	14544454	14544476	G5319.1	NoAnnotation,,G5319.1,TATTTTTAAATTAATATTATCTT,14,14544460,0.729010863399899,2,16,166,	+
chrX	22664436	22664458	G5323.1	NoAnnotation,,G5323.1,CATGGACCATCATCATCATCAAA,4188,22664444,0.6567543068455062,2,3,20936,	+
chrX	24008436	24008473	G5326.1	NoAnnotation,,G5326.1,AATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTA,529,24008458,0.6779941360651898,4,13,4328,	+
chrX	24008475	24008516	G5326.2	NoAnnotation,,G5326.2,AGGGCAAGTCTGGTGCCAGCAGCTGCGGTAATCCAGCTCCAA,23,24008500,0.9977548286623005,2,2,41,	+
chrX	24121541	24121565	G5329.1	NoAnnotation,,G5329.1,CCTAGCAGCAGACTTAGAACTGGTG,301,24121551,0.6338547696392046,2,3,1474,	+
chrX	24121582	24121616	G5330.1	NoAnnotation,,G5330.1,CGACTGTTTAATTAAAACAAAGCATTGCAAAGGCC,96,24121616,0.9981366475441273,2,43,601,	+
chrX	33416488	33416547	G5331.1	NoAnnotation,,G5331.1,CGGGCACGGGTGGAGCCGCCGCAGGTGCAGATCTTGGTGGTATTAGCAAATATTCAAACG,2526,33416532,0.9198866927332822,7,38,3014,	+
chrX	38182721	38182766	G5335.1	NoAnnotation,,G5335.1,CACATCAATATAAAAAAGCTTATTTAACTTATCAAAACGTATTTAT,6,38182766,0.813333200952094,5,7,55,	+
chrX	38182852	38182875	G5336.1	NoAnnotation,,G5336.1,ATCTTCATATTAATCTTAAAATTT,7,38182872,0.7018373782774702,7,9,71,	+
chrX	39832900	39832921	G5340.1	NoAnnotation,,G5340.1,AATATACCACATTTTATTTATT,5,39832911,0.6918403174736465,2,3,52,	+
chrX	42276139	42276159	G5345.1	3'utr,Stag2,G5345.1,ATCTAAATTTTAAATAAAATT,6,42276153,0.6602884751004532,4,4,50,HAVANA	+
chrX	42276210	42276236	G5346.1	3'utr,Stag2,G5346.1,TTTTTTCTTACTTTTAAATTCCAACTT,5,42276218,0.6703756554934305,3,4,68,HAVANA	+
chrX	42276586	42276613	G5347.1	3'utr,Stag2,G5347.1,TTTAAAACAAAATATTAACTTATATTAC,10,42276604,0.6866811913875379,4,14,81,HAVANA	+
chrX	47965811	47965835	G5349.1	3'utr,Ocrl,G5349.1,TCATCTTTTTTATTATAATTTATTG,12,47965821,0.5527457775771109,10,18,172,HAVANA	+
chrX	48406630	48406651	G5351.1	3'utr,Bcorl1,G5351.1,TAGTATTTATTTTATTAGTATT,5,48406646,0.6978927026421989,3,4,60,HAVANA	+
chrX	73026645	73026685	G5369.1	intron,Zfp185,G5369.1,TGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAG,599,73026653,0.7778373653327167,8,15,4229,HAVANA	+
chrX	84396851	84396871	G5373.1	intron,Dmd,G5373.1,CTGATGCGAACCTGGGGAACT,5,84396863,0.8859514602992967,2,5,15,HAVANA	+
chrX	86924218	86924238	G5377.1	NoAnnotation,,G5377.1,CATTCTTTTAACTTAAAACTA,7,86924238,0.6091033798917371,4,6,57,	+
chr10	111297124	111297147	G538.1	3'utr,Osbpl8,G538.1,TACATTTCTAATCTATTATTCCTA,9,111297146,0.6977263070727886,7,11,87,ENSEMBL	+
chrX	94276702	94276735	G5384.1	3'utr,Klhl15,G5384.1,TTGTGGGACTATTTTTATATATGTATATGTGGGT,5,94276735,0.9679136816300231,4,5,44,HAVANA	+
chr10	111533963	111533987	G539.1	NoAnnotation,,G539.1,TGATGATGATGATGATGATGAACGA,76,111533987,0.8248576566407425,2,2,478,	+
chrX	107695304	107695324	G5397.1	NoAnnotation,,G5397.1,ATTTAACTGTGTTAAACTACA,234,107695310,0.6191344967045882,3,5,1867,	+
chrX	109622832	109622856	G5399.1	NoAnnotation,,G5399.1,GATTAACTTTAAGAAGGAGAATATG,133,109622856,0.8894849661419215,2,28,763,	+
chrX	113522700	113522721	G5403.1	intron,Dach2,G5403.1,TTGAAGGTTGTCATATATGATA,11,113522705,0.730447234105685,3,14,64,HAVANA	+
chrX	117203222	117203242	G5405.1	repeat,Tigger3b,G5405.1,AGATTCTGGAACTTGGATATG,19,117203231,0.7590514269968117,2,37,96,RepeatMasker	+
chrX	118769992	118770011	G5406.1	NoAnnotation,,G5406.1,AATTCTCAATAAATTTTTAT,6,118770005,0.6696272389994204,4,6,54,	+
chrX	121417731	121417756	G5408.1	repeat,L1M1,G5408.1,CCTAAACACTATTTCATTTATTTATG,24,121417746,0.5662138305069317,7,22,256,RepeatMasker	+
chrX	135020217	135020238	G5415.1	NoAnnotation,,G5415.1,TCAGTTCCAATATTTATACTAG,6,135020217,0.8305064356711642,2,2,52,	+
chr10	115016535	115016556	G542.1	NoAnnotation,,G542.1,TTTATTATATATTTATATATTG,6,115016547,0.6694812642285753,3,6,78,	+
chrX	151633590	151633613	G5430.1	3'utr,Phf8,G5430.1,ATTTCTATTCACCTTTAATATATT,6,151633603,0.682958932158052,5,7,69,HAVANA	+
chrX	152273814	152273843	G5431.1	3'utr,Kdm5c,G5431.1,CCTATTTTAATTTTATTTTATTATTTTCCT,56,152273831,0.63358657444437,12,53,881,HAVANA	+
chrX	157975394	157975416	G5437.1	NoAnnotation,,G5437.1,CCCATATATCTTTTATCTATTTA,19,157975406,0.6462806266399087,5,14,210,	+
chrX	158592859	158592883	G5438.1	NoAnnotation,,G5438.1,AATACAATATCCTCCTTATTTATTT,9,158592875,0.6407532378463694,4,5,89,	+
chr10	117387028	117387048	G544.1	NoAnnotation,,G544.1,GTATTGTCGTCTCCCACTATC,11,117387032,0.6731833958280138,2,12,76,	+
chrX	160766128	160766151	G5442.1	NoAnnotation,,G5442.1,TTATCACGTCTGCTTTACACGCAG,9,160766151,0.8683526096185795,3,3,44,	+
chrX	162363960	162363994	G5446.1	NoAnnotation,,G5446.1,TATCTCATGGGTCATCATCATCATCATCACCACCA,3901,162363970,0.8375924967340604,7,3924,23366,	+
chrX	165084621	165084642	G5450.1	NoAnnotation,,G5450.1,GGAGAGAACGCAGTCTGAGTGG,47,165084621,0.9988183560885312,2,2,139,	+
chrX	13861792	13861816	G5461.1	repeat,L1MB8,G5461.1,ATTGTGGCTCAGTGGTAGAATGCTT,12,13861816,0.8184829475582792,2,13,84,RepeatMasker	-
chrX	16224748	16224772	G5465.1	NoAnnotation,,G5465.1,TCTTTTAAACTATTTTTCCATATTT,5,16224755,0.7163297311998074,4,5,69,	-
chrX	17513355	17513378	G5467.1	NoAnnotation,,G5467.1,CATGGGCTTTCCTCATCATCCTCA,6,17513372,0.7635025264227863,2,7,41,	-
chrX	18160141	18160167	G5468.1	NoAnnotation,,G5468.1,GCTGATTTAGCTCAGTTGGTAGAGTGC,5,18160167,0.9192296941685563,2,5,36,	-
chrX	19146308	19146329	G5471.1	miRNA,Mir221,G5471.1,AGCTACATTGTCTGCTGGGTTT,42,19146329,0.7715375022524446,2,2,320,ENSEMBL	-
chrX	21680563	21680610	G5474.1	repeat,L1MB8,G5474.1,TCACCAAGCGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGG,652,21680571,0.7906823449209671,9,47,4758,RepeatMasker	-
chrX	23513023	23513044	G5476.1	repeat,LTR2B,G5476.1,GCTAATAATGGATGTGACTGCT,5,23513036,0.7704900611356186,2,6,29,RepeatMasker	-
chrX	42608062	42608084	G5483.1	intron,Tenm1,G5483.1,ACTATTTTTTATTTTATTTATTT,21,42608071,0.7004428563118508,5,18,339,ENSEMBL	-
chrX	52741991	52742013	G5496.1	miRNA,Mir19b-2,G5496.1,TGTGCAAATCCATGCAAAACTGA,65,52741991,0.742880055500221,2,2,323,ENSEMBL	-
chrX	60405134	60405153	G5502.1	intron,Atp11c,G5502.1,TGAGGGCGTGCAAGATTTCT,5,60405135,0.6258134175956621,2,6,24,HAVANA	-
chrX	66646717	66646740	G5512.1	repeat,L1PA7,G5512.1,CCTATATTTTTATACATTTAATAT,21,66646732,0.6792912732212438,4,25,242,RepeatMasker	-
chrX	66839099	66839121	G5513.1	miRNA,Mir465,G5513.1,TATTTAGAATGGCACTGATGTGA,40,66839106,0.7433034701499706,2,4,312,ENSEMBL	-
chrX	70239271	70239294	G5516.1	repeat,AluY,G5516.1,CCTATAATTTATAAACTCTATTTT,5,70239294,0.7810049538594247,2,2,53,RepeatMasker	-
chrX	74494062	74494085	G5522.1	NoAnnotation,,G5522.1,ACCTCATCTTTTTTAATTTTATTT,7,74494078,0.6080185279632421,6,9,84,	-
chrX	75380265	75380286	G5523.1	5'utr,F8,G5523.1,CCTATTTTCTTATACAATTCAA,55,75380278,0.6010049479667038,3,9,541,HAVANA	-
chrX	76128993	76129062	G5526.1	NoAnnotation,,G5526.1,GTTGCAAAGCTGAAACTTAAAGGAATTGATGGAAGGGCACCACAAGGAGTGGAGCCTGTGGCTTAATTTG,35,76129059,0.8984885674817965,5,21,161,	-
chrX	76129168	76129191	G5528.1	NoAnnotation,,G5528.1,GTTTGAAGATGATCAGATACCGTC,8,76129187,0.6977605982054574,2,6,34,	-
chrX	83562974	83562995	G5535.1	repeat,L1PA16,G5535.1,TCAATATATTTATTCTATTTTG,5,83562982,0.6816917408351344,2,7,58,RepeatMasker	-
chrX	87292164	87292186	G5540.1	intron,Il1rapl1,G5540.1,TTCATTTTTTATTCATATTTCTG,6,87292176,0.7131882806901734,2,4,86,ENSEMBL	-
chrX	94076247	94076266	G5543.1	3'utr,Zfx,G5543.1,AAATATCCTATTAAATATTG,6,94076252,0.653085881806969,3,4,41,HAVANA	-
chrX	94607542	94607567	G5545.1	NoAnnotation,,G5545.1,GCTGATGTAGCTCAGTTGGTAGAGTG,5,94607542,0.9775436127019143,2,5,34,	-
chrX	103960472	103960495	G5554.1	3'utr,Rlim,G5554.1,CTTCACTTATTTTTTTTAATAGAA,14,103960472,0.8164723462774106,7,9,170,HAVANA	-
chrX	106144498	106144517	G5558.1	NoAnnotation,,G5558.1,GTGTCTGTAGCTCAGTTGGT,58,106144517,0.7437452223082197,2,6,458,	-
chrX	116287204	116287237	G5567.1	NoAnnotation,,G5567.1,GACGCGCATGAATGGATGAACGAGATTCCCACTG,536,116287237,0.9886780691825946,2,2,2763,	-
chrX	116287332	116287371	G5569.1	NoAnnotation,,G5569.1,GCGGGTGTTGACGCGATGTGATTTCTGCCCAGTGCTCTGA,355,116287371,0.628903345347236,10,60,2453,	-
chrX	129010534	129010554	G5575.1	NoAnnotation,,G5575.1,ATACATTCTAATCATATTATT,14,129010554,0.7750515026196818,2,3,132,	-
chrX	129352516	129352541	G5577.1	NoAnnotation,,G5577.1,TTGGAAGGTTGTCATATGTATAAAAT,378,129352535,0.7660743403504435,3,381,2273,	-
chrX	136177551	136177571	G5585.1	NoAnnotation,,G5585.1,TATAATTAACTATAATTTATT,5,136177558,0.6869380413193263,2,4,49,	-
chrX	139261531	139261553	G5587.1	processed_transcript,C330013F16Rik,G5587.1,TCTTTTCCTTATTATTATATTTT,10,139261548,0.6486603033817135,7,8,140,HAVANA	-
chrX	145334275	145334296	G5591.1	intron,Lhfpl1,G5591.1,TTCTGGGCTGTAGTGCGCTATG,7,145334296,0.6930460971780881,2,2,48,HAVANA	-
chr10	127486176	127486199	G560.1	intron,R3hdm2,G560.1,TAGGCTGACCCTGAAGTGCATCTT,420,127486176,0.709755345155916,5,10,2505,HAVANA	+
chrX	157608204	157608224	G5600.1	NoAnnotation,,G5600.1,TTTTCATTACATTTTAATTCT,5,157608211,0.6604452261024767,2,5,57,	-
chrX	162763135	162763156	G5604.1	NoAnnotation,,G5604.1,CTATTTACTTATTTATTTATTG,6,162763143,0.6548656684373769,2,5,77,	-
chrX	163030996	163031021	G5605.1	NoAnnotation,,G5605.1,GTTCCTGAAGGTCGTCATCTATAATA,8,163031021,0.8752130215678368,2,5,47,	-
chrX	163165939	163165959	G5606.1	NoAnnotation,,G5606.1,AGGGGTGTAGCTCAATTGGCA,77,163165943,0.6358203059183217,2,10,375,	-
chrX	163790788	163790810	G5607.1	NoAnnotation,,G5607.1,TTGAAGGTCCTCATATGTAGCAT,31,163790810,0.9389545405227671,4,11,160,	-
chrX	164873439	164873461	G5608.1	NoAnnotation,,G5608.1,TCACTTCTGCACTCGGCCCTTCT,16,164873461,0.8041257424305597,3,10,94,	-
chrX	167698890	167698914	G5609.1	intron,Frmpd4,G5609.1,ATTAACCAACTTAGAACTGGTACTG,13,167698913,0.9570365438764261,2,8,62,ENSEMBL	-
chr10	127747138	127747161	G561.1	3'utr,Zbtb39,G561.1,TCTAACTCCTTCCATTAAATTAAG,11,127747146,0.6807512835846035,5,10,88,ENSEMBL	+
chrY	16621147	16621173	G5616.1	repeat,HERV9-int,G5616.1,TCTTTTTTATTTATTTACTTATTTACT,6,16621147,0.8762734089040023,3,9,104,RepeatMasker	+
chrY	2194278	2194305	G5621.1	NoAnnotation,,G5621.1,CATACACATTTATTTATTCATTTATTTT,16,2194282,0.7076368877138767,5,14,205,	-
chr10	128128599	128128621	G563.1	3'utr,Baz2a,G563.1,CATAAATATTTATATTTTATCTA,16,128128611,0.5673760193985375,7,16,158,ENSEMBL	+
chr10	128129129	128129151	G564.1	3'utr,Baz2a,G564.1,AATTTAAATTTATTTCTTTCTAT,6,128129146,0.6991365986630157,5,6,78,ENSEMBL	+
chr10	5461985	5462007	G568.1	intron,Syne1,G568.1,ATCCATTTAGAAATTTACTATTT,5,5462000,0.7312826482968937,2,5,47,ENSEMBL	-
chr1	63312309	63312335	G57.1	3'utr,Zdbf2,G57.1,CTATATTTAAATATTCAAATAATTATA,12,63312323,0.6911987664384356,7,10,124,HAVANA	+
chr10	11492133	11492178	G576.1	NoAnnotation,,G576.1,CCCGGCAGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCCACCC,577,11492157,0.9724144181376788,3,549,2308,	-
chr10	11492229	11492250	G577.1	NoAnnotation,,G577.1,TAAACGGGTGTGGTCCATGCAG,19,11492229,0.9884534299543881,2,11,68,	-
chr1	64677363	64677384	G58.1	NoAnnotation,,G58.1,AACCCCTCAAGACTCCTTTAGA,50,64677374,0.8075537196548561,2,50,200,	+
chr10	22482233	22482256	G588.1	NoAnnotation,,G588.1,TCCGATTTTGTGAAATGATTTGAG,5,22482238,0.6138975863490302,2,10,40,	-
chr10	33159198	33159225	G599.1	repeat,L1PA4,G599.1,ATGATGATGATGATGATGGCTCACGTCA,53,33159202,0.9632616693657484,2,54,299,RepeatMasker	-
chr10	34501208	34501237	G600.1	NoAnnotation,,G600.1,ATTTCTTACTTTATTTATTTATTTATTATT,6,34501237,0.7398463954340151,2,3,86,	-
chr10	36409864	36409890	G604.1	NoAnnotation,,G604.1,TATGTACATATATATATTCTTTAATTT,13,36409870,0.6700228517125283,2,4,159,	-
chr10	39076355	39076375	G606.1	NoAnnotation,,G606.1,TATTTCTAATTAATATTATTT,6,39076365,0.7754621602643536,2,5,70,	-
chr10	42856742	42856800	G611.1	repeat,LTR70,G611.1,AAGCTACCACCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCACCCAGGTGG,192,42856742,0.9993660689374096,7,11,1227,RepeatMasker	-
chr10	51521892	51521924	G617.1	repeat,AluJr4,G617.1,AAAGCATTTGCCAAGAATGTTTTCATTAATCAC,48,51521910,0.8551102557088018,3,37,410,RepeatMasker	-
chr10	52341194	52341220	G619.1	intron,Gopc,G619.1,TTTTAAATTTATAATTCCATATTTATA,32,52341216,0.6357079117757433,8,37,418,ENSEMBL	-
chr10	65266582	65266604	G626.1	repeat,L1MC1,G626.1,GTTTCACAATTCCCTTCTAGAAC,9,65266590,0.6795815435804257,2,12,56,RepeatMasker	-
chr10	66736968	66736987	G628.1	NoAnnotation,,G628.1,TCCTCTAACGTCAGGGTTGA,130,66736987,0.7600373205233676,2,4,721,	-
chr10	68094455	68094485	G631.1	repeat,L1PA4,G631.1,CTTCAATTAATTATTTACCTTCCTGTGGAAT,6,68094455,0.8837979255566872,4,6,63,RepeatMasker	-
chr10	69383388	69383414	G632.1	NoAnnotation,,G632.1,TGGGGATTAGCTCAGTTGGCAGAGCAC,7,69383388,0.8177899089356228,2,7,32,	-
chr10	82955338	82955371	G647.1	NoAnnotation,,G647.1,ACCATAAACGAAGCCGACTGGTGATGCGGCGGCG,6,82955353,0.9999908869550609,2,5,5,	-
chr10	83744940	83744960	G650.1	repeat,MIR,G650.1,ACAATTTCTGGAGGCTGTGGA,6,83744952,0.647351792188722,3,6,30,RepeatMasker	-
chr10	84134707	84134728	G651.1	NoAnnotation,,G651.1,TTTCTGAAGGTAACTGGCTTTT,6,84134722,0.8018308296309307,2,7,48,	-
chr1	72074388	72074425	G66.1	NoAnnotation,,G66.1,TAGATAGCAGGACAGTGGCCATGGAAGTCAGAATCTGC,24,72074394,0.9843244443155368,4,10,65,	+
chr10	107933404	107933425	G673.1	NoAnnotation,,G673.1,CTAATAGGTCAAGGGCTTGACT,13,107933404,0.8782246404106137,2,12,62,	-
chr10	109297355	109297380	G676.1	NoAnnotation,,G676.1,CTCCTGATAGCTCAGTGGTAGAGCAC,19,109297380,0.6968107702240081,4,27,80,	-
chr1	72244276	72244297	G69.1	snRNA,Gm24497,G69.1,ATACGTCCTCTATCCGAGGACA,16,72244297,0.9300053776340463,2,14,56,ENSEMBL	+
chr11	4272426	4272450	G697.1	3'utr,Lif,G697.1,TCATATTTAAAATATTTATTTTTTA,12,4272432,0.6407805450493869,5,6,159,HAVANA	+
chr11	5525841	5525864	G700.1	3'utr,Xbp1,G700.1,CTTTCTCCATTTATTTAAAACTAC,6,5525864,0.8625928222030183,4,8,58,HAVANA	+
chr11	16035055	16035075	G704.1	NoAnnotation,,G704.1,TGTTGTCAGCTTGTGTTGTGA,8,16035058,0.6396283925436705,2,16,60,	+
chr11	17198567	17198594	G705.1	3'utr,Ppp3r1,G705.1,CTCTTTAATTTATTTTTCTTCATCTTTT,6,17198594,0.7758460743240401,4,5,99,HAVANA	+
chr11	17221287	17221327	G706.1	intron,Wdr92,G706.1,ATCCGCAGCAGGTCTCCAAGGTGAACAGCCTCTGGCATGTT,1209,17221327,0.6696153952736099,4,22,4175,HAVANA	+
chr11	17221336	17221365	G707.1	intron,Wdr92,G707.1,CAGGAGGTGTCAGAAAAGTTACCACAGGGA,254,17221346,0.8925381234609738,2,9,515,HAVANA	+
chr11	17221367	17221393	G707.2	intron,Wdr92,G707.2,AACTGGCTTGTGGCAGCCAAGCGTTCA,237,17221387,0.8944425120374117,3,5,913,HAVANA	+
chr11	17221461	17221504	G708.1	intron,Wdr92,G708.1,CGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTA,611,17221479,0.7157728532795569,10,62,4469,HAVANA	+
chr11	19797317	19797339	G711.1	NoAnnotation,,G711.1,AAATACTGGAGAATGTTATCATG,14,19797324,0.8574693770318295,2,20,70,	+
chr11	21250327	21250352	G715.1	intron,Vps54,G715.1,ATTTTTTTTTTCTTACTATTTTTATT,5,21250331,0.6548354089892847,5,10,90,HAVANA	+
chr11	23296832	23296859	G719.1	3'utr,Xpo1,G719.1,TTAAAAATATTTATCCTGTTAGAATAGG,41,23296851,0.806620457642978,6,46,361,HAVANA	+
chr1	77773774	77773795	G72.1	NoAnnotation,,G72.1,TTTGCTGTGGAAGCTGCCAGCA,93,77773774,0.7122904168705968,4,8,446,	+
chr11	23296930	23296949	G720.1	3'utr,Xpo1,G720.1,ACTTATACTAATTTACATTG,6,23296949,0.8164326933238228,3,6,48,HAVANA	+
chr11	24078242	24078262	G722.1	5'utr,Bcl11a,G722.1,TATTATTTCTAATTTATTTTG,5,24078262,0.8664746849646376,2,4,66,HAVANA	+
chr11	31935355	31935377	G727.1	3'utr,Cpeb4,G727.1,TTTTTACTGTGTATGGGGAGGTT,5,31935358,0.7552579158861614,2,3,33,HAVANA	+
chr11	34175880	34175901	G729.1	NoAnnotation,,G729.1,ATTAATAAGCCGAGGACTTACT,68,34175880,0.8265895280953305,2,54,331,	+
chr11	44664354	44664373	G741.1	intron,Ebf1,G741.1,ATTTAACTCTTTTATTTATC,7,44664361,0.6559080347125552,2,2,82,HAVANA	+
chr11	48856637	48856669	G748.1	repeat,ALR/Alpha,G748.1,GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT,33,48856637,0.764566135912272,2,2,352,RepeatMasker	+
chr11	52444076	52444102	G752.1	NoAnnotation,,G752.1,CCTTATTTTTTATTTTATTTATTTATT,14,52444089,0.7263141767885737,6,23,246,	+
chr11	53419033	53419057	G755.1	3'utr,Aff4,G755.1,CAACTATTTCCACATTATTTATTAA,27,53419044,0.6635123225841729,4,17,273,HAVANA	+
chr11	53933606	53933630	G757.1	NoAnnotation,,G757.1,AGTGCTGTGATGATGATGATGATGA,21,53933606,0.737065454642326,2,2,155,	+
chr11	55257653	55257672	G758.1	NoAnnotation,,G758.1,GGGCGTGTAGCTCAGTGGGA,5,55257672,0.9532913900621907,2,8,12,	+
chr11	55500852	55500873	G760.1	3'utr,G3bp1,G760.1,CCAATTTTTATTAAAATATTTC,5,55500873,0.710978882106284,3,4,50,HAVANA	+
chr11	56462362	56462386	G763.1	NoAnnotation,,G763.1,TTTTATTTATACAACTTTTTCAATG,10,56462383,0.7557836761656624,4,10,121,	+
chr11	60555873	60555899	G768.1	3'utr,Alkbh5,G768.1,CTCTACAATAAAAACCAAATCTAATAT,5,60555890,0.690743991379885,3,3,30,HAVANA	+
chr11	69090814	69090844	G775.1	3'utr,Vamp2,G775.1,TTATTTATACATATATAATATTATATATATT,11,69090831,0.6011341803590816,10,15,140,HAVANA	+
chr11	69124285	69124308	G776.1	NoAnnotation,,G776.1,TCTCTTCGGAGGCGTGGGTTCGAA,16,69124297,0.9175330658079817,2,16,92,	+
chr11	69653244	69653267	G777.1	3'utr,Fxr2,G777.1,TATTTATTTTTCACTGTACAGTAT,7,69653259,0.82275809685149,4,8,80,HAVANA	+
chr11	69962331	69962355	G778.1	NoAnnotation,,G778.1,TCTTACACTTAATATTTATTTATTT,6,69962338,0.8139128299052232,3,11,73,	+
chr11	70010054	70010075	G779.1	3'utr,Dvl2,G779.1,TTACTCTATTTATTTTAGTCAC,9,70010073,0.722396526606227,3,10,98,HAVANA	+
chr11	72599835	72599859	G785.1	NoAnnotation,,G785.1,CAACTATTTTATTTTATTTATTTAT,7,72599849,0.6900006283852397,4,6,100,	+
chr11	77692668	77692691	G794.1	coding,Nufip2,G794.1,CCTTTTTATCTACCCTTCAAATAT,5,77692683,0.6592328755407153,2,5,50,HAVANA	+
chr11	78073186	78073207	G797.1	miRNA,Mir451,G797.1,AAACCGTTACCATTACTGAGTT,109,78073203,0.6062623561659642,3,4,752,ENSEMBL	+
chr11	80033267	80033288	G800.1	3'utr,Suz12,G800.1,CATTTTCATATTCTTTATTTAT,8,80033272,0.6704305111898656,3,8,104,ENSEMBL	+
chr11	80481108	80481133	G801.1	3'utr,Cdk5r1,G801.1,TAATTTAATTCCCCTTCCCTTATTTT,6,80481122,0.7488271573758383,2,4,60,HAVANA	+
chr1	82895342	82895366	G81.1	3'utr,Agfg1,G81.1,TACATATTTTTCTTAGAAATTAGCT,8,82895360,0.7101900574363335,4,12,83,ENSEMBL	+
chr11	89169407	89169431	G818.1	NoAnnotation,,G818.1,AATTTTTAACTTTTAATTTTTATAT,11,89169407,0.7112970492336269,2,3,160,	+
chr11	94125989	94126022	G822.1	3'utr,Spag9,G822.1,CAATGTAGTTATTTCAGTATTTATTTCTATTATG,6,94125989,0.8105928591175741,4,6,86,HAVANA	+
chr11	96081086	96081117	G823.1	NoAnnotation,,G823.1,TCAGAAAAGTTACCACAGGGATAACTGGCTTG,32,96081086,0.9927679789461443,2,12,161,	+
chr11	96081144	96081190	G824.1	NoAnnotation,,G824.1,TCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCA,732,96081144,0.9105062024968719,12,23,7039,	+
chr11	96301429	96301451	G828.1	3'utr,Hoxb6,G828.1,TTCTATTTTATTAATTTTCTATG,7,96301451,0.8343947177572839,3,4,98,HAVANA	+
chr11	96317186	96317207	G829.1	miRNA,Mir10a,G829.1,TACCCTGTAGATCCGAATTTGT,11,96317206,0.6150172877697342,2,4,79,ENSEMBL	+
chr11	96347289	96347308	G830.1	NoAnnotation,,G830.1,ACTTAACGTGAAAACAGGGT,6,96347300,0.9488786078723463,2,7,17,	+
chr11	96347502	96347523	G831.1	NoAnnotation,,G831.1,AACATTTTCATATATATTTATT,22,96347523,0.5369950292220801,7,22,242,	+
chr11	98767702	98767723	G834.1	intron,Thra,G834.1,TCTATTTTACTATATATTTATG,6,98767712,0.6913555577833509,3,6,72,HAVANA	+
chr11	98832811	98832831	G835.1	3'utr,Casc3,G835.1,TGTGGAAGCTGTCTGCACGCA,8,98832823,0.6798863823632666,2,9,31,ENSEMBL	+
chr11	101604913	101604933	G837.1	snRNA,Gm26316,G837.1,ATACGTCCTCTATCCGAGGAC,6,101604933,0.7564277881341138,3,7,23,ENSEMBL	+
chr11	101627429	101627451	G839.1	snRNA,Gm23849,G839.1,ATACGTCCTCTATCCGAGGACAA,6,101627451,0.8284825234980346,3,6,22,ENSEMBL	+
chr11	101641811	101641831	G841.1	snRNA,Gm24950,G841.1,ATACGTCCTCTATCCGAGGAC,6,101641831,0.6828458701462381,2,3,17,ENSEMBL	+
chr11	101641877	101641898	G842.1	snRNA,Gm24950,G842.1,TGCTCCGTCCACTCCACGCATC,17,101641877,0.7841218730033447,2,2,64,ENSEMBL	+
chr11	103817873	103817897	G845.1	3'utr,Wnt3,G845.1,TCTCTTTTTATAAATATTATTTATT,7,103817880,0.6489528266930024,4,6,100,HAVANA	+
chr11	106058960	106058982	G846.1	3'utr,Dcaf7,G846.1,TTATATATTTAAACTTTCCTTCT,9,106058982,0.8450980270733187,3,10,96,HAVANA	+
chr11	107012911	107012939	G849.1	NoAnnotation,,G849.1,ATTGTGGGTTCGAGTCCCATCTGGGTCGC,25,107012929,0.6966768137057231,2,2,190,	+
chr1	86530276	86530303	G85.1	3'utr,Ptma,G85.1,TATTTTTTATTTACATTTTATATTTTTG,19,86530290,0.6413817267368962,8,14,308,ENSEMBL	+
chr11	107687062	107687085	G852.1	3'utr,Helz,G852.1,CATTTACATTTATTCAATAATATT,7,107687070,0.5761559407956454,7,9,72,HAVANA	+
chr11	116438516	116438542	G868.1	3'utr,Ubald2,G868.1,TTTTTAATATATAACTATAATATATAT,9,116438530,0.6794066218965167,6,7,97,HAVANA	+
chr11	121308377	121308412	G881.1	3'utr,Foxk2,G881.1,TCATCATCATAACGTTATTTATTTAAATGTAGTTAT,30,121308412,0.8521777868933261,10,23,341,HAVANA	+
chr11	5069982	5070011	G883.1	3'utr,Ewsr1,G883.1,TTTTAAATTTATAATTCCATATTTATAATG,30,5069997,0.7464065711998368,8,33,386,HAVANA	-
chr11	5276531	5276564	G884.1	3'utr,Znrf3,G884.1,TTCTCAGAATATTTATTTACTAATATATTTATCT,5,5276564,0.8831611547465505,4,5,64,HAVANA	-
chr11	6231691	6231711	G886.1	NoAnnotation,,G886.1,AGTGTGACTGTGTGTTTCTCA,11,6231703,0.6684413591515852,2,22,77,	-
chr11	6271149	6271171	G887.1	3'utr,Tmed4,G887.1,ATAAATTATATATTTTCCTTCCT,5,6271154,0.6572690297744376,3,5,51,HAVANA	-
chr11	6473090	6473122	G888.1	3'utr,Purb,G888.1,TATTATTCAATCTATACAATCTTTTTGTATTTA,10,6473090,0.8337071772006583,7,10,103,HAVANA	-
chr11	6473124	6473149	G889.1	3'utr,Purb,G889.1,CATATCCTTTTTATTATCTTATTTTG,92,6473135,0.5739994768939093,14,103,1215,HAVANA	-
chr11	6473150	6473170	G890.1	3'utr,Purb,G890.1,AGCTGCCTTTTTAATTTATTG,6,6473154,0.6707841341301949,4,6,60,HAVANA	-
chr11	8338220	8338249	G892.1	NoAnnotation,,G892.1,AATTCATTTTTAATTTTAATTTTATTTTAT,9,8338238,0.627452188329176,5,9,147,	-
chr11	15219056	15219082	G899.1	NoAnnotation,,G899.1,AAGCATCTAAGTGGGAAACTTACCTCA,11,15219070,0.8835181442562868,2,11,48,	-
chr11	25342162	25342187	G902.1	repeat,L1M2,G902.1,ATCTTTAACTTCGGGAAAAGGAGGTC,18,25342162,0.9608979300263131,2,18,87,RepeatMasker	-
chr11	28511365	28511385	G907.1	intron,Ccdc85a,G907.1,TAGTTCCCAAGGGTTCGGCTT,10,28511385,0.8768562866327059,2,9,52,ENSEMBL	-
chr11	33754773	33754806	G915.1	intron,Kcnip1,G915.1,CGTGGAATGCGAGTGCCTAGTGGGCCACTTTTGG,458,33754794,0.7240669018113285,5,11,3669,HAVANA	-
chr11	33754843	33754868	G916.1	intron,Kcnip1,G916.1,ATCTCAACCTATTCACAAACTTTAAA,5,33754855,0.749602041551376,2,2,38,HAVANA	-
chr11	33754896	33754921	G917.1	intron,Kcnip1,G917.1,ACACGCAGTTTTATCCGGTAAAGCGA,139,33754921,0.8010382754458677,2,3,831,HAVANA	-
chr11	33755043	33755068	G918.1	intron,Kcnip1,G918.1,GAAACTCTGGTGGAGGTCCGTAGTGG,106,33755057,0.7206947332807511,4,33,494,HAVANA	-
chr11	48833920	48833955	G934.1	NoAnnotation,,G934.1,GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTT,5,48833920,0.8981438334002333,3,3,24,	-
chr11	51601273	51601296	G937.1	3'utr,Hnrnpab,G937.1,CATCTTATTTAAAATTTCCCCCAG,12,51601273,0.8307871987416149,4,12,96,HAVANA	-
chr11	58302217	58302248	G945.1	NoAnnotation,,G945.1,TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGC,18,58302248,0.9098030780310248,2,4,132,	-
chr11	59024004	59024024	G947.1	intron,Obscn,G947.1,CTACATACCTCGTTCTGTAAA,5,59024012,0.6611647107837358,2,6,29,ENSEMBL	-
chr11	61871714	61871739	G953.1	3'utr,Akap10,G953.1,TACTTAAACCATATTCTATTTAATTG,12,61871715,0.6479136066398188,5,9,116,HAVANA	-
chr11	62205295	62205316	G954.1	repeat,L1ME2,G954.1,TGTAGGTATCTATCTTTGGGTT,32,62205302,0.6789261240580484,2,32,288,RepeatMasker	-
chr11	63889044	63889071	G955.1	3'utr,Hs3st3b1,G955.1,AAATCTATTTTATAATAATTTATTTTTA,9,63889053,0.7521203702711681,4,9,126,HAVANA	-
chr11	67818020	67818043	G960.1	NoAnnotation,,G960.1,CCTATTTTAATTTTATTTTATTAT,18,67818030,0.6079881362677559,7,20,245,	-
chr11	69062331	69062350	G964.1	NoAnnotation,,G964.1,AAGGTCGCGGGTTCGATCCC,5,69062350,0.7640454257648159,2,3,15,	-
chr11	69063039	69063062	G965.1	NoAnnotation,,G965.1,GTTCGAATCCCATCCTCGTCGTCT,14,69063039,0.8772776785429035,2,13,81,	-
chr11	69125223	69125248	G967.1	NoAnnotation,,G967.1,GCCCGGATAGCTCAGTCGGTAGAGCA,32,69125248,0.8492888226645552,2,12,115,	-
chr11	69399203	69399231	G968.1	3'utr,Kdm6b,G968.1,ACAGTCCCACTCACCTCTATTTATTCATT,8,69399231,0.7698774175011558,6,9,55,HAVANA	-
chr11	71013139	71013161	G972.1	coding,Derl2,G972.1,TATTTCCCAATCAGCCTGGTGGA,6,71013146,0.6877175522923792,2,6,36,HAVANA	-
chr11	77078086	77078108	G975.1	miRNA,Mir423,G975.1,AGCTCGGTCTGAGGCCCCTCAGT,13,77078091,0.8119423753898928,2,5,57,ENSEMBL	-
chr11	80137712	80137738	G979.1	intron,Tefm,G979.1,CCTTATCTTTTACTTTACTTATTTATT,6,80137712,0.8250421449205085,2,2,90,HAVANA	-
chr11	86268016	86268045	G988.1	3'utr,Med13,G988.1,CTCTTACTACTTAGTCAACTATCCTCAGCT,6,86268033,0.7604493462928843,2,6,55,HAVANA	-
chr11	86270506	86270531	G989.1	3'utr,Med13,G989.1,TCTTATATTTCTTAACCTCTTTTATA,9,86270506,0.8266623771323288,2,5,120,HAVANA	-
chr11	86584116	86584141	G991.1	miRNA,Mir21,G991.1,TAGCTTATCAGACTGATGTTGACTGT,435,86584116,0.797265852254172,9,26,3465,ENSEMBL	-
chr11	88707973	88707993	G993.1	intron,Msi2,G993.1,CTTAAGATGAGATCTCTCTGG,6,88707976,0.6983000721614679,2,6,36,HAVANA	-
chr11	92356742	92356767	G997.1	NoAnnotation,,G997.1,AATTATTATATCTTATCTATTTATTG,50,92356756,0.7068465645876062,4,4,600,	-