BEGIN{FS=",";OFS="\t"}{ #in: paralyzer dist format # 4 lines per cluster, line 3: ENSMUST00000000188-chr6---127095541-127096700,+,608,695,G1,ConversionPercent,.... if ($6=="ConversionPercent"){ for (i=7;i<=NF;i++){ x=$i;if (x>1){x=1;}isT[i]=1;if(x<0){x=0;isT[i]=0;} pct[i]=x; } } if ($6=="ReadCount"){ s=$3;tr=$1;nt=0; p=$1;cs=$2;ce=$3;ei=substr(p,1,18); t=substr(p,24,1); if (t=="-"){sp=25}else{sp=26} ch=substr(p,20,sp-21); st=substr(p,sp,1);n=split(substr(p,sp+2),a,"-"); for (i=7;i<=NF;i++){ if (isT[i]==1){ if (st=="+"){ gs=a[1]+s; }else{ gs=a[2]-s; if (gs