echo "0hrep2.1kIntrons2-log2-1"
./myp-100chunks.sh /data/images/proton/DKlab/mr/parclip/paralyzer/ini-files-1kIntron2/sh.0hrep2.ini &> 0hrep2.1kIntrons2-log2
./mergeMyPar-100chunks.sh sh-clusters-0hrep2.txt2-1kIntrons2
#mv sh-clusters-0hrep2.txt2.csv sh-clusters-0hrep2.txt2-1kIntrons2.csv
wc -l sh-clusters-0hrep2.txt2-1kIntrons2.csv
./mergeMyPar-100chunks.sh sh-groups-0hrep2.txt2-1kIntrons2
#mv sh-groups-0hrep2.txt2.csv sh-groups-0hrep2.txt2-1kIntrons2.csv
./mergeMyPar-100chunks.sh sh-distributions-0hrep2.txt2-1kIntrons2
#mv sh-distributions-0hrep2.txt2.csv sh-distributions-0hrep2.txt2-1kIntrons2


echo "0hrep3.1kIntrons2-log2-1"
./myp-100chunks.sh /data/images/proton/DKlab/mr/parclip/paralyzer/ini-files-1kIntron2/sh.0hrep3.ini &> 0hrep3.1kIntrons2-log2
./mergeMyPar-100chunks.sh sh-clusters-0hrep3.txt2-1kIntrons2
#mv  sh-clusters-0hrep3.txt2.csv  sh-clusters-0hrep3.txt2-1kIntrons2.csv
wc -l sh-clusters-0hrep3.txt2-1kIntrons2.csv
./mergeMyPar-100chunks.sh sh-groups-0hrep3.txt2-1kIntrons2
#mv sh-groups-0hrep3.txt2.csv sh-groups-0hrep3.txt2-1kIntrons2.csv
./mergeMyPar-100chunks.sh sh-distributions-0hrep3.txt2-1kIntrons2
#mv sh-distributions-0hrep3.txt2.csv sh-distributions-0hrep3.txt2-1kIntrons2.csv


exit 0
echo "0hrep1.1kIntrons2-log2-1"
./myp-100chunks.sh /data/images/proton/DKlab/mr/parclip/paralyzer/ini-files-1kIntron2/sh.0hrep1.ini &> 0hrep1.1kIntrons2-log2
./mergeMyPar-100chunks.sh sh-clusters-0hrep1.txt2-1kIntrons2
#mv sh-clusters-0hrep1.txt2.csv sh-clusters-0hrep1.txt2-1kIntrons2.csv
wc -l sh-clusters-0hrep1.txt2-1kIntrons2.csv
./mergeMyPar-100chunks.sh sh-groups-0hrep1.txt2-1kIntrons2
#mv sh-groups-0hrep1.txt2.csv sh-groups-0hrep1.txt2-1kIntrons2.csv
./mergeMyPar-100chunks.sh sh-distributions-0hrep1.txt2-1kIntrons2
#mv sh-distributions-0hrep1.txt2.csv sh-distributions-0hrep1.txt2-1kIntrons2

exit 0


#r8

exit 0

echo "IGG.1kIntrons2-log2-1"
./myp-100chunks.sh /data/images/proton/DKlab/mr/parclip/paralyzer/ini-files-1kIntron2/sh.IGG.ini &> IGG.1kIntrons2-log2
./mergeMyPar-100chunks.sh sh-clusters-IGG.txt2-1kIntrons2
wc -l sh-clusters-IGG.txt2-1kIntrons2.csv
./mergeMyPar-100chunks.sh sh-groups-IGG.txt2-1kIntrons2
./mergeMyPar-100chunks.sh sh-distributions-IGG.txt2-1kIntrons2

echo "IL4.1kIntrons2-log2-1"
./myp-100chunks.sh /data/images/proton/DKlab/mr/parclip/paralyzer/ini-files-1kIntron2/sh.IL4.ini &> IL4.1kIntrons2-log
./mergeMyPar-100chunks.sh sh-clusters-IL4.txt2-1kIntrons2
wc -l sh-clusters-IL4.txt2-1kIntrons2.csv
./mergeMyPar-100chunks.sh sh-groups-IL4.txt2-1kIntrons2
./mergeMyPar-100chunks.sh sh-distributions-IL4.txt2-1kIntrons2