Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 208881 reads mapping to 132684 Unique genomic coordinates Making up 2519 groups Consisting of 655 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 223236 reads mapping to 137890 Unique genomic coordinates Making up 2648 groups Consisting of 708 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 244541 reads mapping to 150730 Unique genomic coordinates Making up 2932 groups Consisting of 782 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 213624 reads mapping to 139853 Unique genomic coordinates Making up 2734 groups Consisting of 703 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 223775 reads mapping to 147967 Unique genomic coordinates Making up 2882 groups Consisting of 750 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 227300 reads mapping to 145735 Unique genomic coordinates Making up 2874 groups Consisting of 741 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 220230 reads mapping to 141257 Unique genomic coordinates Making up 2779 groups Consisting of 740 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 241757 reads mapping to 146818 Unique genomic coordinates Making up 2862 groups Consisting of 735 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 206083 reads mapping to 137665 Unique genomic coordinates Making up 2702 groups Consisting of 688 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 242694 reads mapping to 139043 Unique genomic coordinates Making up 2668 groups Consisting of 732 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 225517 reads mapping to 137899 Unique genomic coordinates Making up 2667 groups Consisting of 722 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 274343 reads mapping to 137823 Unique genomic coordinates Making up 2666 groups Consisting of 716 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 226008 reads mapping to 142927 Unique genomic coordinates Making up 2799 groups Consisting of 759 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 214811 reads mapping to 146097 Unique genomic coordinates Making up 2888 groups Consisting of 749 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 227417 reads mapping to 144712 Unique genomic coordinates Making up 2824 groups Consisting of 696 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 229922 reads mapping to 146051 Unique genomic coordinates Making up 2833 groups Consisting of 766 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 226953 reads mapping to 141759 Unique genomic coordinates Making up 2763 groups Consisting of 751 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 211324 reads mapping to 145650 Unique genomic coordinates Making up 2768 groups Consisting of 713 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 254475 reads mapping to 142009 Unique genomic coordinates Making up 2755 groups Consisting of 716 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 327496 reads mapping to 150483 Unique genomic coordinates Making up 2924 groups Consisting of 760 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 238081 reads mapping to 136221 Unique genomic coordinates Making up 2675 groups Consisting of 691 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 241373 reads mapping to 133531 Unique genomic coordinates Making up 2582 groups Consisting of 661 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 215489 reads mapping to 144321 Unique genomic coordinates Making up 2841 groups Consisting of 744 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 252616 reads mapping to 145190 Unique genomic coordinates Making up 2774 groups Consisting of 709 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 208763 reads mapping to 147941 Unique genomic coordinates Making up 2849 groups Consisting of 743 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 197416 reads mapping to 140350 Unique genomic coordinates Making up 2766 groups Consisting of 689 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 245511 reads mapping to 151404 Unique genomic coordinates Making up 2875 groups Consisting of 762 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 200265 reads mapping to 137901 Unique genomic coordinates Making up 2719 groups Consisting of 704 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 208925 reads mapping to 139917 Unique genomic coordinates Making up 2707 groups Consisting of 717 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 232667 reads mapping to 136766 Unique genomic coordinates Making up 2706 groups Consisting of 671 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 206193 reads mapping to 148773 Unique genomic coordinates Making up 2917 groups Consisting of 703 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 233536 reads mapping to 146951 Unique genomic coordinates Making up 2841 groups Consisting of 772 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 241397 reads mapping to 140443 Unique genomic coordinates Making up 2720 groups Consisting of 770 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 225196 reads mapping to 141252 Unique genomic coordinates Making up 2753 groups Consisting of 720 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 216876 reads mapping to 139495 Unique genomic coordinates Making up 2676 groups Consisting of 735 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 255874 reads mapping to 142421 Unique genomic coordinates Making up 2717 groups Consisting of 725 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 210516 reads mapping to 144348 Unique genomic coordinates Making up 2812 groups Consisting of 756 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 200817 reads mapping to 135361 Unique genomic coordinates Making up 2639 groups Consisting of 655 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 222976 reads mapping to 136558 Unique genomic coordinates Making up 2586 groups Consisting of 723 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 267339 reads mapping to 147083 Unique genomic coordinates Making up 2856 groups Consisting of 770 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 204753 reads mapping to 141882 Unique genomic coordinates Making up 2820 groups Consisting of 741 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 227197 reads mapping to 148577 Unique genomic coordinates Making up 2874 groups Consisting of 749 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 223322 reads mapping to 136718 Unique genomic coordinates Making up 2687 groups Consisting of 698 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 214642 reads mapping to 143067 Unique genomic coordinates Making up 2780 groups Consisting of 736 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 258674 reads mapping to 143902 Unique genomic coordinates Making up 2832 groups Consisting of 756 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 224179 reads mapping to 145254 Unique genomic coordinates Making up 2867 groups Consisting of 719 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 217347 reads mapping to 147183 Unique genomic coordinates Making up 2823 groups Consisting of 730 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 207335 reads mapping to 137906 Unique genomic coordinates Making up 2702 groups Consisting of 701 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 217547 reads mapping to 140859 Unique genomic coordinates Making up 2788 groups Consisting of 726 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 212997 reads mapping to 144529 Unique genomic coordinates Making up 2822 groups Consisting of 717 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 265783 reads mapping to 144464 Unique genomic coordinates Making up 2768 groups Consisting of 753 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 195621 reads mapping to 134468 Unique genomic coordinates Making up 2632 groups Consisting of 710 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 234467 reads mapping to 147221 Unique genomic coordinates Making up 2857 groups Consisting of 736 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 232383 reads mapping to 146631 Unique genomic coordinates Making up 2824 groups Consisting of 782 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 254455 reads mapping to 147467 Unique genomic coordinates Making up 2899 groups Consisting of 788 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 218860 reads mapping to 139244 Unique genomic coordinates Making up 2696 groups Consisting of 666 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 203582 reads mapping to 142784 Unique genomic coordinates Making up 2808 groups Consisting of 744 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 233869 reads mapping to 146799 Unique genomic coordinates Making up 2905 groups Consisting of 765 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 204590 reads mapping to 135575 Unique genomic coordinates Making up 2575 groups Consisting of 733 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 229298 reads mapping to 139729 Unique genomic coordinates Making up 2772 groups Consisting of 715 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 253548 reads mapping to 140318 Unique genomic coordinates Making up 2775 groups Consisting of 732 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 205495 reads mapping to 138706 Unique genomic coordinates Making up 2713 groups Consisting of 681 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 232085 reads mapping to 146271 Unique genomic coordinates Making up 2911 groups Consisting of 786 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 246954 reads mapping to 140898 Unique genomic coordinates Making up 2719 groups Consisting of 713 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 195637 reads mapping to 143155 Unique genomic coordinates Making up 2785 groups Consisting of 711 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 218150 reads mapping to 138772 Unique genomic coordinates Making up 2769 groups Consisting of 750 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 172423 reads mapping to 125397 Unique genomic coordinates Making up 2467 groups Consisting of 643 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 219664 reads mapping to 141956 Unique genomic coordinates Making up 2752 groups Consisting of 723 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 234162 reads mapping to 146908 Unique genomic coordinates Making up 2887 groups Consisting of 728 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 204315 reads mapping to 138255 Unique genomic coordinates Making up 2712 groups Consisting of 698 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 208329 reads mapping to 136220 Unique genomic coordinates Making up 2611 groups Consisting of 676 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 203460 reads mapping to 137055 Unique genomic coordinates Making up 2598 groups Consisting of 675 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 225434 reads mapping to 144300 Unique genomic coordinates Making up 2865 groups Consisting of 773 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 269964 reads mapping to 140537 Unique genomic coordinates Making up 2729 groups Consisting of 694 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 206921 reads mapping to 144217 Unique genomic coordinates Making up 2858 groups Consisting of 748 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 276744 reads mapping to 141172 Unique genomic coordinates Making up 2700 groups Consisting of 705 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 210740 reads mapping to 134954 Unique genomic coordinates Making up 2608 groups Consisting of 704 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 204613 reads mapping to 138399 Unique genomic coordinates Making up 2663 groups Consisting of 727 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 253810 reads mapping to 154972 Unique genomic coordinates Making up 3059 groups Consisting of 845 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 223653 reads mapping to 140296 Unique genomic coordinates Making up 2690 groups Consisting of 703 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 210269 reads mapping to 143841 Unique genomic coordinates Making up 2803 groups Consisting of 723 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 288731 reads mapping to 135885 Unique genomic coordinates Making up 2631 groups Consisting of 689 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 236495 reads mapping to 143246 Unique genomic coordinates Making up 2749 groups Consisting of 698 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 217757 reads mapping to 147688 Unique genomic coordinates Making up 2840 groups Consisting of 720 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 180852 reads mapping to 132523 Unique genomic coordinates Making up 2520 groups Consisting of 623 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 214201 reads mapping to 143486 Unique genomic coordinates Making up 2885 groups Consisting of 698 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 209384 reads mapping to 142585 Unique genomic coordinates Making up 2795 groups Consisting of 726 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 213749 reads mapping to 145952 Unique genomic coordinates Making up 2874 groups Consisting of 725 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 203544 reads mapping to 140132 Unique genomic coordinates Making up 2772 groups Consisting of 713 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 192583 reads mapping to 134713 Unique genomic coordinates Making up 2645 groups Consisting of 701 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 275406 reads mapping to 140071 Unique genomic coordinates Making up 2696 groups Consisting of 720 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 361976 reads mapping to 148326 Unique genomic coordinates Making up 2848 groups Consisting of 767 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 225335 reads mapping to 139390 Unique genomic coordinates Making up 2712 groups Consisting of 683 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 249666 reads mapping to 146125 Unique genomic coordinates Making up 2871 groups Consisting of 782 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 242907 reads mapping to 148064 Unique genomic coordinates Making up 2869 groups Consisting of 736 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 204665 reads mapping to 136117 Unique genomic coordinates Making up 2672 groups Consisting of 673 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 235979 reads mapping to 147214 Unique genomic coordinates Making up 2872 groups Consisting of 732 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 232890 reads mapping to 140102 Unique genomic coordinates Making up 2671 groups Consisting of 699 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 193646 reads mapping to 140592 Unique genomic coordinates Making up 2794 groups Consisting of 774 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 220262 reads mapping to 140127 Unique genomic coordinates Making up 2725 groups Consisting of 701 clusters